BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031335
MFIEFCNGNYQQPYNLGSQETFGIQISQMALLPEGTTELLHHDKLLLPLIKCQNVIILTA
TNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGC
YRKSRQGPLIISFEGKDQARIEAAIESLFKKFHRGAFSEVV

High Scoring Gene Products

Symbol, full name Information P value
AT5G03430 protein from Arabidopsis thaliana 3.1e-35

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031335
        (161 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2831849 - symbol:AT5G03430 species:3702 "Arabi...   381  3.1e-35   1


>TAIR|locus:2831849 [details] [associations]
            symbol:AT5G03430 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0006777 "Mo-molybdopterin cofactor
            biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=ISS]
            [GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
            InterPro:IPR001453 InterPro:IPR002500 Pfam:PF00994 Pfam:PF01507
            SMART:SM00852 EMBL:CP002688 GO:GO:0003824 EMBL:AL162751
            GO:GO:0006777 Gene3D:3.40.50.620 InterPro:IPR014729
            Gene3D:3.40.980.10 SUPFAM:SSF53218 UniGene:At.4867 UniGene:At.54704
            IPI:IPI00539591 PIR:T48367 RefSeq:NP_568117.1
            ProteinModelPortal:Q9LZE4 SMR:Q9LZE4 PRIDE:Q9LZE4
            EnsemblPlants:AT5G03430.1 GeneID:831843 KEGG:ath:AT5G03430
            TAIR:At5g03430 InParanoid:Q9LZE4 OMA:TSIGSIH PhylomeDB:Q9LZE4
            ProtClustDB:CLSN2689430 Genevestigator:Q9LZE4 Uniprot:Q9LZE4
        Length = 497

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 74/134 (55%), Positives = 98/134 (73%)

Query:    27 SQMALLPEGTTEXXXXXXXXXXXIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLME 86
             ++MA LPEG TE           IKC+NVI+L ATN  EL+KEW CL EL + GG SL+E
Sbjct:   364 NEMAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKLGGGSLIE 423

Query:    87 PYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIE 146
              Y+S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GKD AR+++A +
Sbjct:   424 -YSSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGKDNARMDSAAQ 482

Query:   147 SLFKKFHRGAFSEV 160
             +L KKF +  F E+
Sbjct:   483 ALRKKFKKDVFVEI 496


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      161       150   0.00087  104 3  11 22  0.47    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  143 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.58u 0.14s 13.72t   Elapsed:  00:00:01
  Total cpu time:  13.58u 0.14s 13.72t   Elapsed:  00:00:01
  Start:  Fri May 10 22:12:34 2013   End:  Fri May 10 22:12:35 2013

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