BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031336
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 3 GSPPLLLNQILFFLCGCAYSLPLPFLRWKSHTFMAPLC-LVITMGLTGLPFYMHTQQYVL 61
GS PL L + F+ G AYS+ LPFLRWK +A LC L + + L F++H Q +V
Sbjct: 213 GSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLHIQTFVF 272
Query: 62 GRPFVITRPLILMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKV 114
RP V TRPLI A M+ F+ V L KD+PD+EGD+ FG+ + V LG++KV
Sbjct: 273 RRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKV 325
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 3 GSPPLLLNQILFFLCGCAYSLPLPFLRWKSHTFMAPLC-LVITMGLTGLPFYMHTQQYVL 61
GS PL + F+ G AYS+ LP LRWK +A +C L + + + FY+H Q +V
Sbjct: 202 GSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQTHVF 261
Query: 62 GRPFVITRPLILMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKV 114
GRP + TRPLI A MS F+ V L KD+PD+EGDK FG+ + V LG+++V
Sbjct: 262 GRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRV 314
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 4 SPPLLLNQILFFLCGCAYSLPLPFLRWKSHTFMAPLCLVITMGLT-GLPFYMHTQQYVLG 62
S PL + + AY++ LP LRWK + + + + + +T L F++H Q V
Sbjct: 220 SWPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFK 279
Query: 63 RPFVITRPLILMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKV 114
RP RPLI AI+SI+A V L KD+PD+EGD+KFG+ +L + LG ++V
Sbjct: 280 RPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRV 331
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 1 MSGSPPLLLNQILFFLCGCAYSLPLPFLRWKSHTFMAPLCLVITMGLT-GLPFYMHTQQY 59
++GS PL+ N ++ AYS+ +P LRWK + F+A +C++ T L + ++ H Q
Sbjct: 216 ITGSWPLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTV 275
Query: 60 VLGRPFVITRPLILMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKV 114
VL RP R L + A M+ ++ L KD+PDVEGDK+ G+++ V LG+++
Sbjct: 276 VLKRPIGFPRSLGFLVAFMTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRA 330
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 18 GCAYSLPLPFLRWKSHTFMAPLCLVITMG-LTGLPFYMHTQQYVLGRPFVITRPLILMGA 76
G YS+P P LR K A L + G L Y H + LG PF + P+ + +
Sbjct: 212 GTIYSVP-P-LRMKRFPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQWSAPVAFITS 268
Query: 77 IMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKVG 115
+++FA V + KDLPDVEGD+KF ++TL LG +
Sbjct: 269 FVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIA 307
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 18 GCAYSLPLPFLRWKSHTFMAPLCLVITMG-LTGLPFYMHTQQYVLGRPFVITRPLILMGA 76
G YS+P PF R K + A L + G L Y T+ LG F + P+ +
Sbjct: 205 GTIYSVP-PF-RLKRYPVAAFLIIATVRGFLLNFGVYYATRA-ALGLTFQWSSPVAFITC 261
Query: 77 IMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKVG 115
+++FA V + KDLPDVEGD+K+ ++TL LG +
Sbjct: 262 FVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIA 300
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 17/87 (19%)
Query: 31 KSHTFMAPLCLVITMGLTGLPFYMHTQQYVLGRPFVITRPLILMGAIMSIFAFV----NG 86
K F+ LC+ I GLT +V G +IT+ + L G I+ FAF+
Sbjct: 120 KQRCFIGNLCVAILTGLT----------FVFGG--LITKDVNL-GFILGFFAFLMTLSRE 166
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEK 113
++KD+ D+EGDKK +TL ++ G +K
Sbjct: 167 IIKDIEDIEGDKKEDAHTLPIIYGTKK 193
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEKVGV 116
++KD+ D EGDK+ G TL +++GK+K G+
Sbjct: 172 IMKDIEDFEGDKRLGARTLPIMIGKKKSGI 201
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEKVGV 116
++KD+ D+EGDK G TL +++G++K +
Sbjct: 172 IMKDIEDIEGDKALGARTLPIIIGEKKAAI 201
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEK 113
++KD+ D+EGD K G TL +++GK +
Sbjct: 172 IMKDIEDIEGDMKMGAKTLPIIIGKRR 198
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEKVG 115
++KD+ DVEGD K G TL ++LG+ K
Sbjct: 172 IVKDIEDVEGDLKKGAKTLPIILGRRKAA 200
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 81 FAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEK 113
F +K + D+EGDK+ G+NTL V LG++
Sbjct: 166 FTLSREFVKGIEDIEGDKRNGVNTLAVKLGEKS 198
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEKVGV 116
LLKD D+EGD+ G +TL + +G K +
Sbjct: 172 LLKDAEDIEGDRAHGADTLAIRIGVRKTAL 201
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 16 LCGCAYSLPLPFLRWKSHTFMAPLCLV--ITMG-LTGLPFYMHTQQYVLGRPFVITRPLI 72
L + SL + + W+ + CLV IT+ LTGL F VLG R I
Sbjct: 103 LVVVSSSLLMVYYAWR----LKKRCLVGNITISFLTGLSFVFG--GIVLGE----VRASI 152
Query: 73 LMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKVGV 116
L+G + ++KD+ DVEGD+ G TL + G GV
Sbjct: 153 LLGFYAFLMTMAREIVKDMEDVEGDRAEGATTLPITHGMRISGV 196
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 53 YMHTQQYVLGRPFVITRPLIL---MGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLL 109
Y+ ++ G F L+ + AI + LLKD DV+GD G TL +++
Sbjct: 135 YLAGSVFLFGGAFAGIEGLVRNLSLAAITFLATIARELLKDAEDVDGDAAGGARTLPMIV 194
Query: 110 GKEKVGV 116
G K G+
Sbjct: 195 GVRKTGI 201
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEK 113
++KD+ D+ GDKK G TL +L+G +K
Sbjct: 180 IVKDVEDIVGDKKDGARTLPILIGAKK 206
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 84 VNGLLKDLPDVEGDKKFGMNTLCVLLGK 111
V +LKDL DVEGD G+ TL + G+
Sbjct: 165 VREILKDLEDVEGDAALGLKTLPIAYGE 192
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEK 113
++KD+ D+EGD G TL +L+G+++
Sbjct: 172 VIKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 21/27 (77%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEK 113
++KD+ D++GD+ G+ TL +++G+ +
Sbjct: 173 IVKDVEDIDGDRAEGLRTLPIVIGERR 199
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 34/128 (26%)
Query: 8 LLNQILFFLCGCAYSLPLPFLRWKSHTFMAPLCLVITMGLTGLPFYMHTQQYVLGRPFVI 67
L ++ F+ A + LP L +C+ + L GL Y QY+ GRP
Sbjct: 86 LAYSVVLFVGAAALAATLPVL---------AVCIA-ALNLAGLLTYT---QYLKGRPGAG 132
Query: 68 TRPLILMGAIMSIFA---------------------FVNGLLKDLPDVEGDKKFGMNTLC 106
+ +G +F F ++KD+ D+ GD+ G+ TL
Sbjct: 133 NALVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLP 192
Query: 107 VLLGKEKV 114
V++G ++
Sbjct: 193 VVVGHQRA 200
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 34/128 (26%)
Query: 8 LLNQILFFLCGCAYSLPLPFLRWKSHTFMAPLCLVITMGLTGLPFYMHTQQYVLGRPFVI 67
L ++ F+ A + LP L +C+ + L GL Y QY+ GRP
Sbjct: 86 LAYSVVLFVGAAALAATLPVL---------AVCIA-ALNLAGLLTYT---QYLKGRPGAG 132
Query: 68 TRPLILMGAIMSIFA---------------------FVNGLLKDLPDVEGDKKFGMNTLC 106
+ +G +F F ++KD+ D+ GD+ G+ TL
Sbjct: 133 NALVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLP 192
Query: 107 VLLGKEKV 114
V++G ++
Sbjct: 193 VVVGHQRA 200
>sp|Q6T1F5|COMT1_AMMMJ Caffeic acid 3-O-methyltransferase OS=Ammi majus GN=COMT PE=1 SV=1
Length = 365
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 39 LCLVITMGLTGLPFYMHTQQYVLGRPFVITRPLILMGAIMSIFA---FVNGLLKDLPDVE 95
L L+ ++ G Y+ Q P +++ I+ + A +N L+DLPD
Sbjct: 44 LNLLESIAKAGPGAYVSPSQLAAALPSSQPDTPVMLDRILRLLASYSVLNCKLRDLPDAR 103
Query: 96 GDKKFGMNTLCVLLGKEKVGVS 117
++ +G+ +C L K GVS
Sbjct: 104 VERLYGLAPVCKFLTKNSDGVS 125
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 20/24 (83%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLG 110
++KD+ D++GD+K G+ TL +++G
Sbjct: 180 IIKDIEDLDGDRKEGLQTLPIVIG 203
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEK 113
++KD+ DVEGD G TL ++ GK++
Sbjct: 172 VIKDIEDVEGDMAKGAKTLPIIWGKKR 198
>sp|P39582|MENA_BACSU Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase
OS=Bacillus subtilis (strain 168) GN=menA PE=3 SV=1
Length = 311
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 10/64 (15%)
Query: 50 LPFYMHTQQYVLGRPFVITRPL-ILMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVL 108
+ F++ T + + + +I+ P+ IL+GAI L ++ D+E DKK G TL +L
Sbjct: 173 ISFFIQTDKINM-QSILISIPIAILVGAI--------NLSNNIRDIEEDKKGGRKTLAIL 223
Query: 109 LGKE 112
+G +
Sbjct: 224 MGHK 227
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKE---KVGV 116
+ KD+ D+EGDK G TL ++ G E K+GV
Sbjct: 172 IFKDIEDIEGDKAQGAKTLPIVWGIESSSKIGV 204
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 49 GLPFYMHTQQYVLGRP--FVITRPLILMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLC 106
GLP++ G P F++T L+ I L D +EGD++ G+ +L
Sbjct: 158 GLPWFTGAAVLSAGAPSFFIVTVALLYAFGAHGIMT-----LNDFKALEGDRQHGVRSLP 212
Query: 107 VLLGKE 112
V+LG E
Sbjct: 213 VMLGPE 218
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEKVG 115
++KD+ D+EGD G +TL + +G +K G
Sbjct: 188 IVKDIEDMEGDSLEGADTLPLRIGAKKAG 216
>sp|Q876L3|ARE1_SACBA Sterol O-acyltransferase 1 OS=Saccharomyces bayanus GN=ARE1 PE=3
SV=1
Length = 623
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 14 FFLCGCAYSLPLPFLRWKSHTFMAPLCLVITMGLTGLPFYMHTQQYV-LGRPFVITRPLI 72
FF+ + + L F+RWK F+A + P Y++ + + R F+ ++
Sbjct: 257 FFVVFVHWLVKLGFIRWKWTGFVAVSLFELCFIPVSFPVYVYYFHFSWVTRIFLFLHSVV 316
Query: 73 LMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTL 105
L+ S FAF NG L D++ + +F N L
Sbjct: 317 LLMKAHS-FAFYNGYLW---DIKNELEFSSNKL 345
>sp|P44739|MENA_HAEIN 1,4-dihydroxy-2-naphthoate octaprenyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=menA PE=3 SV=1
Length = 308
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 88 LKDLPDVEGDKKFGMNTLCVLLGKEK 113
+ +L D+E D K G NTL V LG K
Sbjct: 203 INNLRDIEQDAKAGKNTLAVRLGAYK 228
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 29.6 bits (65), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 87 LLKDLPDVEGDKKFGMNTLCVLLGKEKVGVSTLRQYDVSGLRMCSY----SWG 135
LLKD D+EGD+ G TL + +G K S L V +CS+ +WG
Sbjct: 172 LLKDAEDIEGDRLGGARTLPMQIGVRK--TSVLAVIFVLFAVLCSFVPFLTWG 222
>sp|Q8U4R3|1A1D_PYRFU Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF0010 PE=3 SV=2
Length = 329
Score = 29.6 bits (65), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 47 LTGLPF---YMHTQQYVLGRPFVITRPLIL-MGAIMSIFAFVNGLLKDLPDVEGDKKFGM 102
LTGL + +Y+LG + +I+ +GA+ S AFV GL KK G
Sbjct: 45 LTGLGIGGNKIRKLEYLLGDAIIRKADVIITVGAVHSNHAFVTGLAA--------KKLGF 96
Query: 103 NTLCVLLGKEKV 114
+ + VL GKE++
Sbjct: 97 DVVLVLRGKEEL 108
>sp|Q43046|COMT1_POPKI Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis
GN=HOMT1 PE=3 SV=1
Length = 365
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 64 PFVITRPLILMGAIMSIFAFVNGLLKDLPDVEGDKKFGMNTLCVLLGKEKVGVS 117
P ++ R L L+ + ++ + LKDLPD + ++ +G+ +C L K + GVS
Sbjct: 74 PVMLDRILRLLAS----YSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVS 123
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.145 0.489
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,128,171
Number of Sequences: 539616
Number of extensions: 2387000
Number of successful extensions: 5098
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5063
Number of HSP's gapped (non-prelim): 42
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)