BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031338
MIEALMARAVGIVSPTILFQFGLSPQTIASLGRRGISFSSSSAGFRSIRAVQENGGPRRL
VDIVRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLL
TEYVTRFYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS

High Scoring Gene Products

Symbol, full name Information P value
NPQ6
AT5G43050
protein from Arabidopsis thaliana 2.0e-47
AT3G56830 protein from Arabidopsis thaliana 1.4e-05
NPQ7
AT1G65420
protein from Arabidopsis thaliana 8.0e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031338
        (161 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2167811 - symbol:NPQ6 "AT5G43050" species:3702...   496  2.0e-47   1
TAIR|locus:2103645 - symbol:AT3G56830 "AT3G56830" species...   105  1.4e-05   1
TAIR|locus:2206305 - symbol:NPQ7 "AT1G65420" species:3702...   102  8.0e-05   1


>TAIR|locus:2167811 [details] [associations]
            symbol:NPQ6 "AT5G43050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0010196 "nonphotochemical
            quenching" evidence=IMP] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009507 EMBL:AB008267 GO:GO:0010196 InterPro:IPR007572
            Pfam:PF04483 EMBL:BT024700 IPI:IPI00519167 RefSeq:NP_199119.1
            UniGene:At.49818 UniGene:At.71992 STRING:Q9FMH9 PRIDE:Q9FMH9
            EnsemblPlants:AT5G43050.1 GeneID:834320 KEGG:ath:AT5G43050
            TAIR:At5g43050 eggNOG:NOG13983 HOGENOM:HOG000240876
            InParanoid:Q9FMH9 OMA:TEYVTRF PhylomeDB:Q9FMH9
            ProtClustDB:CLSN2686646 Genevestigator:Q9FMH9 Uniprot:Q9FMH9
        Length = 158

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 98/113 (86%), Positives = 104/113 (92%)

Query:    51 VQENGGP--RRLVDIVRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGV 108
             +QE  GP  RRL+DI+R VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTISLSFGALGV
Sbjct:    46 LQETEGPTPRRLIDIIRSVPEISRNYFKKPSRRTLFGGISLLGGFYVAQTISLSFGALGV 105

Query:   109 NDVIAAVLCVLLTEYVTRFYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS 161
             NDVIAAVLCVLLTEYVTRFYYSR  VTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct:   106 NDVIAAVLCVLLTEYVTRFYYSRTTVTFPIALLNNFKMGFTYGLFIDAFKLAS 158


>TAIR|locus:2103645 [details] [associations]
            symbol:AT3G56830 "AT3G56830" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] GO:GO:0009507
            EMBL:CP002686 InterPro:IPR007572 Pfam:PF04483 IPI:IPI00539968
            RefSeq:NP_191242.2 UniGene:At.75281 UniGene:At.9843
            EnsemblPlants:AT3G56830.1 GeneID:824850 KEGG:ath:AT3G56830
            OMA:ECIGALM PhylomeDB:F4J0S9 Uniprot:F4J0S9
        Length = 230

 Score = 105 (42.0 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 29/75 (38%), Positives = 39/75 (52%)

Query:    89 LLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTRFYY--SRP---KVTFPLALLNN 143
             LL GFY A   S   G  G  DV++A L VL+ E +    Y  S P   K+   + + N 
Sbjct:   113 LLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLINKMRSTITMFNY 172

Query:   144 FKMGFTYGLFIDAFK 158
             +K G   GLF+D+FK
Sbjct:   173 WKTGLALGLFLDSFK 187


>TAIR|locus:2206305 [details] [associations]
            symbol:NPQ7 "AT1G65420" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0010196 "nonphotochemical
            quenching" evidence=IMP] GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 EMBL:AC004512
            UniGene:At.28694 UniGene:At.66795 GO:GO:0010196 EMBL:BT025776
            EMBL:AY088215 IPI:IPI00544455 PIR:T02365 RefSeq:NP_564851.1
            STRING:O80813 EnsemblPlants:AT1G65420.1 GeneID:842853
            KEGG:ath:AT1G65420 TAIR:At1g65420 eggNOG:NOG240593
            HOGENOM:HOG000155497 InParanoid:O80813 OMA:IGMLMYK PhylomeDB:O80813
            ProtClustDB:CLSN2689032 Genevestigator:O80813 GermOnline:AT1G65420
            InterPro:IPR007572 Pfam:PF04483 Uniprot:O80813
        Length = 197

 Score = 102 (41.0 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 28/80 (35%), Positives = 39/80 (48%)

Query:    89 LLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTRFYYSRP-------KVTFPLALL 141
             LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   +  +
Sbjct:   118 LLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFM 177

Query:   142 NNFKMGFTYGLFIDAFKLAS 161
             N +K G   GLF+DAFKL S
Sbjct:   178 NFWKAGVCLGLFVDAFKLGS 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.144   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      161       143   0.00091  102 3  11 22  0.36    31
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  489 (52 KB)
  Total size of DFA:  102 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.04u 0.11s 11.15t   Elapsed:  00:00:00
  Total cpu time:  11.04u 0.11s 11.15t   Elapsed:  00:00:00
  Start:  Fri May 10 22:14:01 2013   End:  Fri May 10 22:14:01 2013

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