Your job contains 1 sequence.
>031345
MILGLNLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSAKQN
VPNETYGYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEW
EMKDGFVFFQKAKDSAPCKEIPSLQLINQTLSYARELERIV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031345
(161 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2019504 - symbol:RPN12a "regulatory particle n... 616 3.9e-60 1
TAIR|locus:2165750 - symbol:RPN12b "regulatory particle n... 597 4.0e-58 1
ZFIN|ZDB-GENE-040625-136 - symbol:psmd8 "proteasome (pros... 302 7.3e-27 1
DICTYBASE|DDB_G0273979 - symbol:psmD8-2 "26S proteasome r... 293 6.6e-26 1
DICTYBASE|DDB_G0272564 - symbol:psmD8-1 "26S proteasome r... 293 6.6e-26 1
UNIPROTKB|Q5RE15 - symbol:PSMD8 "26S proteasome non-ATPas... 292 8.4e-26 1
MGI|MGI:1888669 - symbol:Psmd8 "proteasome (prosome, macr... 292 8.4e-26 1
RGD|1309842 - symbol:Psmd8 "proteasome (prosome, macropai... 291 1.1e-25 1
UNIPROTKB|F1LMQ3 - symbol:Psmd8 "Protein Psmd8" species:1... 291 1.1e-25 1
UNIPROTKB|P48556 - symbol:PSMD8 "26S proteasome non-ATPas... 290 1.4e-25 1
UNIPROTKB|F1MYH8 - symbol:PSMD8 "26S proteasome non-ATPas... 289 1.8e-25 1
UNIPROTKB|Q3SYT7 - symbol:PSMD8 "26S proteasome non-ATPas... 289 1.8e-25 1
UNIPROTKB|E2QY43 - symbol:PSMD8 "Uncharacterized protein"... 289 1.8e-25 1
UNIPROTKB|F1RKI9 - symbol:PSMD8 "Uncharacterized protein"... 289 1.8e-25 1
FB|FBgn0028693 - symbol:Rpn12 "Regulatory particle non-AT... 259 2.6e-22 1
UNIPROTKB|K7EJC1 - symbol:PSMD8 "26S proteasome non-ATPas... 243 1.3e-20 1
UNIPROTKB|K7EJR3 - symbol:PSMD8 "26S proteasome non-ATPas... 243 1.3e-20 1
WB|WBGene00004468 - symbol:rpn-12 species:6239 "Caenorhab... 229 4.0e-19 1
FB|FBgn0036465 - symbol:Rpn12R "Regulatory particle non-A... 224 1.4e-18 1
ASPGD|ASPL0000034023 - symbol:AN3019 species:162425 "Emer... 223 1.7e-18 1
UNIPROTKB|G4N7Y6 - symbol:MGG_03512 "26S proteasome non-A... 216 9.5e-18 1
POMBASE|SPBC16G5.01 - symbol:rpn12 "19S proteasome regula... 197 9.8e-16 1
GENEDB_PFALCIPARUM|PFC0520w - symbol:PFC0520w "26S protea... 179 1.5e-13 1
CGD|CAL0003893 - symbol:orf19.213 species:5476 "Candida a... 158 2.5e-11 1
UNIPROTKB|Q59SD0 - symbol:RPN12 "Likely 26S proteasome re... 158 2.5e-11 1
SGD|S000001948 - symbol:RPN12 "Subunit of the 19S regulat... 139 3.5e-09 1
UNIPROTKB|K7EK21 - symbol:PSMD8 "26S proteasome non-ATPas... 95 6.3e-05 1
>TAIR|locus:2019504 [details] [associations]
symbol:RPN12a "regulatory particle non-ATPase 12A"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;TAS] [GO:0005838 "proteasome regulatory particle"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0009647 "skotomorphogenesis"
evidence=IMP] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP;RCA;IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048528 "post-embryonic root development" evidence=IMP]
[GO:0048825 "cotyledon development" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA;IMP] [GO:0043248 "proteasome
assembly" evidence=RCA;IMP] [GO:0051788 "response to misfolded
protein" evidence=RCA;IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR006746 Pfam:PF03399 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009735
GO:GO:0009733 GO:GO:0043161 GO:GO:0009941 EMBL:AC009519
GO:GO:0009408 GO:GO:0009736 GO:GO:0000502 GO:GO:0043248
GO:GO:0009908 GO:GO:0048366 GO:GO:0031540 GO:GO:0048825
GO:GO:0009647 GO:GO:0051788 InterPro:IPR005062 GO:GO:0048528
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 EMBL:AY230846 EMBL:AY230847 EMBL:AF410265
EMBL:AY039857 EMBL:AY143888 IPI:IPI00536776 PIR:H96668
RefSeq:NP_176633.1 UniGene:At.24612 ProteinModelPortal:Q9SGW3
IntAct:Q9SGW3 STRING:Q9SGW3 PaxDb:Q9SGW3 PRIDE:Q9SGW3 DNASU:842760
EnsemblPlants:AT1G64520.1 GeneID:842760 KEGG:ath:AT1G64520
TAIR:At1g64520 InParanoid:Q9SGW3 OMA:TEDQDAF PhylomeDB:Q9SGW3
ProtClustDB:CLSN2679310 Genevestigator:Q9SGW3 Uniprot:Q9SGW3
Length = 267
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 118/150 (78%), Positives = 129/150 (86%)
Query: 12 VQNRIAEFHXXXXXXXXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
VQNRIAEFH +PCIKHAVELEQSFMEGAYNRVLSA+Q P+ TY YFMD
Sbjct: 118 VQNRIAEFHTELELLSSATLEDPCIKHAVELEQSFMEGAYNRVLSARQTAPDATYVYFMD 177
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQK 131
LLAKT+RDEIAGCSEKAYDY+SI DA QMLLF+SDQELL YV +EHPEWE+K+GFV FQK
Sbjct: 178 LLAKTIRDEIAGCSEKAYDYVSISDARQMLLFSSDQELLTYVTDEHPEWEVKEGFVVFQK 237
Query: 132 AKDSAPCKEIPSLQLINQTLSYARELERIV 161
AK++APCKEIPSLQLINQTLSYARELERIV
Sbjct: 238 AKETAPCKEIPSLQLINQTLSYARELERIV 267
>TAIR|locus:2165750 [details] [associations]
symbol:RPN12b "regulatory particle non-ATPase 12B"
species:3702 "Arabidopsis thaliana" [GO:0005838 "proteasome
regulatory particle" evidence=IEA;ISS] [GO:0006508 "proteolysis"
evidence=IEA;ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR006746 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006508 EMBL:AB017067 InterPro:IPR019280 Pfam:PF10075
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 ProtClustDB:CLSN2679310 EMBL:AY258413
IPI:IPI00517114 RefSeq:NP_199019.2 UniGene:At.50500
ProteinModelPortal:Q9FHY0 EnsemblPlants:AT5G42040.1 GeneID:834209
KEGG:ath:AT5G42040 TAIR:At5g42040 InParanoid:Q9FHY0 OMA:ANESAPC
Genevestigator:Q9FHY0 Uniprot:Q9FHY0
Length = 233
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 113/150 (75%), Positives = 126/150 (84%)
Query: 12 VQNRIAEFHXXXXXXXXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
VQNRIAEFH NPCIKHAVELEQSFMEGAYNRVLSA+Q P+ETY YFMD
Sbjct: 84 VQNRIAEFHTELGLLSSATLENPCIKHAVELEQSFMEGAYNRVLSARQTAPDETYVYFMD 143
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQK 131
LLAKT+RDEIAGCSEKAYD+LSI + +MLLF+SDQ+LL YV EEHPEWE+KDG V FQK
Sbjct: 144 LLAKTIRDEIAGCSEKAYDHLSISEGCKMLLFSSDQQLLTYVNEEHPEWEVKDGLVVFQK 203
Query: 132 AKDSAPCKEIPSLQLINQTLSYARELERIV 161
+++APCKEIPSLQLINQTLSY RELERI+
Sbjct: 204 TRETAPCKEIPSLQLINQTLSYTRELERIL 233
>ZFIN|ZDB-GENE-040625-136 [details] [associations]
symbol:psmd8 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 8" species:7955 "Danio rerio" [GO:0005838
"proteasome regulatory particle" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR006746 ZFIN:ZDB-GENE-040625-136
GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838
CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008 HOVERGEN:HBG024389
KO:K03031 OrthoDB:EOG4GTKDP PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:BX908775
EMBL:BX936429 EMBL:BC071432 IPI:IPI00505432 RefSeq:NP_001002131.1
UniGene:Dr.1191 STRING:Q6IQH4 DNASU:415221
Ensembl:ENSDART00000005431 GeneID:415221 KEGG:dre:415221
InParanoid:Q6IQH4 NextBio:20818888 Uniprot:Q6IQH4
Length = 267
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/151 (41%), Positives = 89/151 (58%)
Query: 13 QNRIAEFHXXXXXXXXXXX-XNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR++EFH N I+H V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 119 QNRVSEFHTELERLSAKDIQTNVYIRHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 178
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEW-EMKDGFVFFQ 130
L T+RDEIAGC EKAY+ + +A ++L F+S +++ +Y K+ + W + DG+ F
Sbjct: 179 TLLDTIRDEIAGCIEKAYEQIQFNEATRVLFFSSPKKMTDYAKKRN--WTQSPDGYYSFS 236
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
IPS +L Q + YAR+LE IV
Sbjct: 237 TQHQKTEEVTIPSTELAKQVIEYARQLEMIV 267
>DICTYBASE|DDB_G0273979 [details] [associations]
symbol:psmD8-2 "26S proteasome regulatory subunit
S14" species:44689 "Dictyostelium discoideum" [GO:0006508
"proteolysis" evidence=IEA] [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006746
dictyBase:DDB_G0273979 dictyBase:DDB_G0272564 Pfam:PF03399
GO:GO:0007275 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0004175
InterPro:IPR005062 GO:GO:0005838 eggNOG:NOG285042 KO:K03031
PANTHER:PTHR12387 OMA:SENKHLM EMBL:V00194 EMBL:M11429 PIR:A03384
RefSeq:XP_644348.1 RefSeq:XP_645066.1 STRING:P02889 PRIDE:P02889
EnsemblProtists:DDB0185109 EnsemblProtists:DDB0266350
GeneID:8618741 GeneID:8619235 KEGG:ddi:DDB_G0272564
KEGG:ddi:DDB_G0273979 ProtClustDB:CLSZ2431065 Uniprot:P02889
Length = 263
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 59/149 (39%), Positives = 97/149 (65%)
Query: 13 QNRIAEFHXXXXXXXXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDL 72
+++ +EFH N IK + +E+S EG+YN+++ ++ VP+E Y F+D+
Sbjct: 119 KHKTSEFHSEIELIEFNNLDNSFIKFPLLVEKSITEGSYNKIIQSRSGVPSEYYQVFLDI 178
Query: 73 LAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQKA 132
LA +++++IA CSEK++ LS+KDA ++LLF + + +Y+KE + W+++ + F
Sbjct: 179 LADSIKEDIANCSEKSFKTLSLKDAEKVLLFNDNNQFQQYIKERN--WKVQGDVIQFGN- 235
Query: 133 KDSAPCKEIPSLQLINQTLSYARELERIV 161
D+ EIPSLQLI+QTL YA+ELERIV
Sbjct: 236 NDNQTV-EIPSLQLIHQTLHYAKELERIV 263
>DICTYBASE|DDB_G0272564 [details] [associations]
symbol:psmD8-1 "26S proteasome regulatory subunit
S14" species:44689 "Dictyostelium discoideum" [GO:0006508
"proteolysis" evidence=IEA] [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006746
dictyBase:DDB_G0273979 dictyBase:DDB_G0272564 Pfam:PF03399
GO:GO:0007275 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0004175
InterPro:IPR005062 GO:GO:0005838 eggNOG:NOG285042 KO:K03031
PANTHER:PTHR12387 OMA:SENKHLM EMBL:V00194 EMBL:M11429 PIR:A03384
RefSeq:XP_644348.1 RefSeq:XP_645066.1 STRING:P02889 PRIDE:P02889
EnsemblProtists:DDB0185109 EnsemblProtists:DDB0266350
GeneID:8618741 GeneID:8619235 KEGG:ddi:DDB_G0272564
KEGG:ddi:DDB_G0273979 ProtClustDB:CLSZ2431065 Uniprot:P02889
Length = 263
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 59/149 (39%), Positives = 97/149 (65%)
Query: 13 QNRIAEFHXXXXXXXXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDL 72
+++ +EFH N IK + +E+S EG+YN+++ ++ VP+E Y F+D+
Sbjct: 119 KHKTSEFHSEIELIEFNNLDNSFIKFPLLVEKSITEGSYNKIIQSRSGVPSEYYQVFLDI 178
Query: 73 LAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQKA 132
LA +++++IA CSEK++ LS+KDA ++LLF + + +Y+KE + W+++ + F
Sbjct: 179 LADSIKEDIANCSEKSFKTLSLKDAEKVLLFNDNNQFQQYIKERN--WKVQGDVIQFGN- 235
Query: 133 KDSAPCKEIPSLQLINQTLSYARELERIV 161
D+ EIPSLQLI+QTL YA+ELERIV
Sbjct: 236 NDNQTV-EIPSLQLIHQTLHYAKELERIV 263
>UNIPROTKB|Q5RE15 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR006746 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 GO:GO:0022624 GO:GO:0005838
HOVERGEN:HBG024389 PANTHER:PTHR12387 EMBL:CR857724
UniGene:Pab.14307 PRIDE:Q5RE15 InParanoid:Q5RE15 Uniprot:Q5RE15
Length = 289
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 61/151 (40%), Positives = 88/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 141 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYAFFID 200
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 201 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGPNNYYSFA 258
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 259 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 289
>MGI|MGI:1888669 [details] [associations]
symbol:Psmd8 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005838 "proteasome regulatory particle"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] InterPro:IPR006746
MGI:MGI:1888669 GO:GO:0005634 GO:GO:0005737 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 EMBL:AC164564 GO:GO:0022624
GO:GO:0005838 CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008
HOVERGEN:HBG024389 KO:K03031 OrthoDB:EOG4GTKDP PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:AK020132
IPI:IPI00403509 RefSeq:NP_080821.3 UniGene:Mm.273152
ProteinModelPortal:Q9CX56 IntAct:Q9CX56 STRING:Q9CX56
PhosphoSite:Q9CX56 PaxDb:Q9CX56 PRIDE:Q9CX56 DNASU:57296
Ensembl:ENSMUST00000059642 GeneID:57296 KEGG:mmu:57296
UCSC:uc009gbb.2 InParanoid:Q9CX56 NextBio:313655 Bgee:Q9CX56
Genevestigator:Q9CX56 GermOnline:ENSMUSG00000030591 Uniprot:Q9CX56
Length = 353
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 61/151 (40%), Positives = 89/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 205 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 264
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F++ +++ +Y K+ W + + + F
Sbjct: 265 ILLDTIRDEIAGCIEKAYEKILFAEATRILFFSTPKKMTDYAKKRG--WVLGPNNYYSFA 322
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 323 SQQQKPEDSTIPSTELAKQVIEYARQLEMIV 353
>RGD|1309842 [details] [associations]
symbol:Psmd8 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0022624 "proteasome accessory complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR006746
RGD:1309842 GO:GO:0005634 GO:GO:0005737 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838 CTD:5714
eggNOG:NOG285042 HOGENOM:HOG000196008 HOVERGEN:HBG024389 KO:K03031
OrthoDB:EOG4GTKDP PANTHER:PTHR12387 IPI:IPI00364072
RefSeq:NP_001094301.1 UniGene:Rn.137673 GeneID:292766
KEGG:rno:292766 NextBio:634736 EMBL:BC105894 IntAct:Q3B8P5
STRING:Q3B8P5 UCSC:RGD:1309842 InParanoid:Q3B8P5
ArrayExpress:Q3B8P5 Genevestigator:Q3B8P5 Uniprot:Q3B8P5
Length = 285
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 61/151 (40%), Positives = 89/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 137 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 196
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F++ +++ +Y K+ W + + + F
Sbjct: 197 ILLDTIRDEIAGCIEKAYEKILFAEATRILFFSTPKKMTDYAKKRG--WLLGPNNYYSFA 254
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 255 SQQQKPEDSTIPSTELARQVIEYARQLEMIV 285
>UNIPROTKB|F1LMQ3 [details] [associations]
symbol:Psmd8 "Protein Psmd8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR006746 RGD:1309842 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838
CTD:5714 KO:K03031 PANTHER:PTHR12387 GeneTree:ENSGT00390000014682
OMA:TEDQDAF IPI:IPI00364072 RefSeq:NP_001094301.1 UniGene:Rn.137673
PRIDE:F1LMQ3 Ensembl:ENSRNOT00000027937 GeneID:292766
KEGG:rno:292766 NextBio:634736 ArrayExpress:F1LMQ3 Uniprot:F1LMQ3
Length = 353
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 61/151 (40%), Positives = 89/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 205 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 264
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F++ +++ +Y K+ W + + + F
Sbjct: 265 ILLDTIRDEIAGCIEKAYEKILFAEATRILFFSTPKKMTDYAKKRG--WLLGPNNYYSFA 322
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 323 SQQQKPEDSTIPSTELARQVIEYARQLEMIV 353
>UNIPROTKB|P48556 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR006746 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0044281 GO:GO:0000082 EMBL:CH471126
GO:GO:0051436 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383
InterPro:IPR019280 Pfam:PF10075 EMBL:AC005789 GO:GO:0005838
CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008 HOVERGEN:HBG024389
KO:K03031 OrthoDB:EOG4GTKDP PANTHER:PTHR12387 EMBL:AK301771
EMBL:BC001164 EMBL:BC065006 EMBL:D38047 IPI:IPI00937278 PIR:S56108
RefSeq:NP_002803.2 UniGene:Hs.78466 ProteinModelPortal:P48556
IntAct:P48556 MINT:MINT-1136185 STRING:P48556 PhosphoSite:P48556
DMDM:308153477 PaxDb:P48556 PRIDE:P48556 DNASU:5714
Ensembl:ENST00000215071 GeneID:5714 KEGG:hsa:5714 UCSC:uc002oii.4
GeneCards:GC19P038865 H-InvDB:HIX0040074 HGNC:HGNC:9566
HPA:CAB021101 HPA:HPA006702 neXtProt:NX_P48556 PharmGKB:PA33912
InParanoid:P48556 OMA:RDEIGAC ChiTaRS:PSMD8 GenomeRNAi:5714
NextBio:22198 Bgee:P48556 CleanEx:HS_PSMD8 Genevestigator:P48556
GermOnline:ENSG00000099341 Uniprot:P48556
Length = 350
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 61/151 (40%), Positives = 88/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 202 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 261
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 262 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGPNNYYSFA 319
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 320 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 350
>UNIPROTKB|F1MYH8 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005838 "proteasome regulatory particle"
evidence=IEA] InterPro:IPR006746 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838
UniGene:Bt.17968 KO:K03031 PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:DAAA02047024
IPI:IPI00712865 RefSeq:XP_001790254.1 UniGene:Bt.91216
Ensembl:ENSBTAT00000044859 GeneID:785653 KEGG:bta:785653
NextBio:20927416 Uniprot:F1MYH8
Length = 287
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 61/151 (40%), Positives = 88/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 139 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 198
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMK-DGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 199 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGLNNYYSFA 256
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 257 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 287
>UNIPROTKB|Q3SYT7 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005838 "proteasome regulatory particle" evidence=IEA]
InterPro:IPR006746 Pfam:PF03399 GO:GO:0006508 InterPro:IPR019280
Pfam:PF10075 InterPro:IPR005062 GO:GO:0022624 GO:GO:0005838
EMBL:BC103400 IPI:IPI00912143 RefSeq:NP_001030283.1
UniGene:Bt.17968 STRING:Q3SYT7 PRIDE:Q3SYT7 GeneID:512891
KEGG:bta:512891 CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008
HOVERGEN:HBG024389 InParanoid:Q3SYT7 KO:K03031 OrthoDB:EOG4GTKDP
NextBio:20870602 PANTHER:PTHR12387 Uniprot:Q3SYT7
Length = 287
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 61/151 (40%), Positives = 88/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 139 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 198
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMK-DGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 199 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGINNYYSFA 256
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 257 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 287
>UNIPROTKB|E2QY43 [details] [associations]
symbol:PSMD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005838 "proteasome regulatory particle" evidence=IEA]
InterPro:IPR006746 GO:GO:0005634 GO:GO:0005737 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838 CTD:5714 KO:K03031
PANTHER:PTHR12387 GeneTree:ENSGT00390000014682 OMA:RDEIGAC
EMBL:AAEX03000975 RefSeq:XP_533681.1 Ensembl:ENSCAFT00000009584
GeneID:476470 KEGG:cfa:476470 Uniprot:E2QY43
Length = 351
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 61/151 (40%), Positives = 88/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 203 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 262
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMK-DGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 263 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGLNNYYSFA 320
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 321 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 351
>UNIPROTKB|F1RKI9 [details] [associations]
symbol:PSMD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005838
"proteasome regulatory particle" evidence=IEA] InterPro:IPR006746
GO:GO:0005634 GO:GO:0005737 GO:GO:0006508 InterPro:IPR019280
Pfam:PF10075 GO:GO:0005838 KO:K03031 PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:FP236590
RefSeq:XP_003127158.1 Ensembl:ENSSSCT00000003279 GeneID:100515483
KEGG:ssc:100515483 Uniprot:F1RKI9
Length = 351
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 61/151 (40%), Positives = 88/151 (58%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 203 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 262
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMK-DGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 263 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGLNNYYSFA 320
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 321 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 351
>FB|FBgn0028693 [details] [associations]
symbol:Rpn12 "Regulatory particle non-ATPase 12" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR006746 EMBL:AE014296 GO:GO:0022008
GO:GO:0008283 GO:GO:0006508 GO:GO:0004175 GO:GO:0008541
GO:GO:0000022 InterPro:IPR019280 Pfam:PF10075 eggNOG:NOG285042
KO:K03031 PANTHER:PTHR12387 GeneTree:ENSGT00390000014682
OMA:RDEIGAC EMBL:AF145314 EMBL:AY084160 RefSeq:NP_648904.1
UniGene:Dm.981 IntAct:Q9V436 MINT:MINT-867414 STRING:Q9V436
EnsemblMetazoa:FBtr0075308 GeneID:39845 KEGG:dme:Dmel_CG4157
UCSC:CG4157-RA CTD:39845 FlyBase:FBgn0028693 InParanoid:Q9V436
OrthoDB:EOG48933B GenomeRNAi:39845 NextBio:815690 Uniprot:Q9V436
Length = 264
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 58/149 (38%), Positives = 82/149 (55%)
Query: 14 NRIAEFHXXXXXXXXXXXX-NPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDL 72
NR+++FH N I+ + LEQ MEG YN++ AK VP E Y YFMDL
Sbjct: 118 NRVSDFHTELELLSVDVIQHNQFIRPILALEQYIMEGRYNKIFQAKSTVPVEVYSYFMDL 177
Query: 73 LAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQKA 132
L +TVRDEI C EK+YD +S KDA + L E+ + + +W+++ +
Sbjct: 178 LLETVRDEIGACIEKSYDKISAKDAAKRLNLRVPDEIKAFGAKR--QWKLEASGDYSFTD 235
Query: 133 KDSAPCKEIPSLQLINQTLSYARELERIV 161
+ P + +PS +L Q LSYAR+LE IV
Sbjct: 236 RSVKPKELLPSEELAEQVLSYARDLEMIV 264
>UNIPROTKB|K7EJC1 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR006746 InterPro:IPR019280 Pfam:PF10075 EMBL:AC005789
PANTHER:PTHR12387 HGNC:HGNC:9566 Ensembl:ENST00000592035
Uniprot:K7EJC1
Length = 172
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 47/104 (45%), Positives = 67/104 (64%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 35 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 94
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKE 115
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+
Sbjct: 95 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKK 138
>UNIPROTKB|K7EJR3 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR006746 Pfam:PF03399 EMBL:AC005789 InterPro:IPR005062
PANTHER:PTHR12387 HGNC:HGNC:9566 Ensembl:ENST00000592561
Uniprot:K7EJR3
Length = 258
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 47/104 (45%), Positives = 67/104 (64%)
Query: 13 QNRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFH N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 146 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 205
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKE 115
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+
Sbjct: 206 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKK 249
>WB|WBGene00004468 [details] [associations]
symbol:rpn-12 species:6239 "Caenorhabditis elegans"
[GO:0005838 "proteasome regulatory particle" evidence=IEA;ISS]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0040027 "negative regulation
of vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR006746 GO:GO:0008340 GO:GO:0016246 GO:GO:0006508
GO:GO:0040027 InterPro:IPR019280 Pfam:PF10075 EMBL:Z69904
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 PIR:T27772 RefSeq:NP_496489.1
ProteinModelPortal:Q23449 IntAct:Q23449 MINT:MINT-210917
STRING:Q23449 World-2DPAGE:0020:Q23449 PaxDb:Q23449
EnsemblMetazoa:ZK20.5.1 EnsemblMetazoa:ZK20.5.2 GeneID:174786
KEGG:cel:CELE_ZK20.5 UCSC:ZK20.5.1 CTD:174786 WormBase:ZK20.5
GeneTree:ENSGT00390000014682 InParanoid:Q23449 OMA:SENKHLM
NextBio:885500 Uniprot:Q23449
Length = 250
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 53/151 (35%), Positives = 89/151 (58%)
Query: 14 NRIAEFHXXXXXX-XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDL 72
NR+++FH N I V +EQS MEGAYN+V+ ++N+P+ Y F+ +
Sbjct: 104 NRLSDFHMLLEQIPQKEQTSNAYISTPVRIEQSLMEGAYNKVVLTEKNIPSPFYTIFIRI 163
Query: 73 LAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDG--FVFFQ 130
+ T+R EIA EK++ L+ KDA MLLF +D+++ ++ +E +W + DG +VF
Sbjct: 164 MLDTIRREIATSIEKSFKVLTAKDATVMLLFDNDEQMKKFGQER--KWHL-DGERYVFEI 220
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ P + ++++ QTL YA++LE+IV
Sbjct: 221 EVAQEKPVN-LDTVRVATQTLFYAKQLEQIV 250
>FB|FBgn0036465 [details] [associations]
symbol:Rpn12R "Regulatory particle non-ATPase 12-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR006746 Pfam:PF03399
EMBL:AE014296 GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075
InterPro:IPR005062 GO:GO:0005838 eggNOG:NOG285042 KO:K03031
PANTHER:PTHR12387 GeneTree:ENSGT00390000014682 EMBL:AY075229
EMBL:BK002145 RefSeq:NP_996086.1 UniGene:Dm.33494 STRING:Q9VUJ4
EnsemblMetazoa:FBtr0075669 GeneID:2768973 KEGG:dme:Dmel_CG11552
UCSC:CG11552-RA CTD:2768973 FlyBase:FBgn0036465 InParanoid:Q9VUJ4
OMA:EEIASCM OrthoDB:EOG489338 GenomeRNAi:2768973 NextBio:848890
Uniprot:Q9VUJ4
Length = 262
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 51/150 (34%), Positives = 83/150 (55%)
Query: 14 NRIAEFHXXXXXXXXXXXXNPC-IKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDL 72
NR+A+FH + I+ + LE +MEG YN++L AK+++P+E Y FMD+
Sbjct: 115 NRLADFHIELERLPTALLLHDSFIQPVLALENYYMEGRYNKILQAKKSMPSEIYSNFMDI 174
Query: 73 LAKTVRDEIAGCSEKAYDYLSIKDAGQML-LFTSDQELLEYVKEEHPEWEMKDGFVFFQK 131
L T R+EIA C EK+Y ++ K A Q L L +EL E + +W + + +
Sbjct: 175 LVNTAREEIASCMEKSYLKMAPKLAAQRLGLRPGSKELFELATKR--QWCLDEEGNYDYA 232
Query: 132 AKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ P +++P+ + L+YA+ELE+IV
Sbjct: 233 GLHTRPMEKVPAKDIATHNLTYAQELEKIV 262
>ASPGD|ASPL0000034023 [details] [associations]
symbol:AN3019 species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006746 Pfam:PF03399
GO:GO:0006508 EMBL:BN001306 InterPro:IPR005062 GO:GO:0005838
PANTHER:PTHR12387 OMA:RDEIGAC EnsemblFungi:CADANIAT00010060
Uniprot:C8VIV4
Length = 276
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 49/135 (36%), Positives = 80/135 (59%)
Query: 33 NPCIKHAVELEQSFMEGAYNRVL--SAKQNVPNETYGYFMDLLAKTVRDEIAGCSEKAYD 90
+P IK+ V LE++ MEG+Y++V + + VP+E + F ++L T+R EIA CSEKAY
Sbjct: 144 DPFIKYPVNLERNLMEGSYDKVWRETNSERVPSEDFALFSNVLVGTIRSEIADCSEKAYP 203
Query: 91 YLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQKAKDSAPCKE----IPSLQL 146
L I +A +L S+ ++E+ ++ W ++DG ++F ++A E + S +
Sbjct: 204 SLPISNAKNLLFLESEGAVMEFAQQRG--WTLRDGRIYFPVEPEAATRSEKDILVASSTI 261
Query: 147 INQTLSYARELERIV 161
I + YARELE IV
Sbjct: 262 IENAIGYARELETIV 276
>UNIPROTKB|G4N7Y6 [details] [associations]
symbol:MGG_03512 "26S proteasome non-ATPase regulatory
subunit 8" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006746 Pfam:PF03399
GO:GO:0006508 EMBL:CM001234 InterPro:IPR005062 GO:GO:0005838
KO:K03031 PANTHER:PTHR12387 RefSeq:XP_003716407.1
EnsemblFungi:MGG_03512T0 GeneID:2676609 KEGG:mgr:MGG_03512
Uniprot:G4N7Y6
Length = 291
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 52/128 (40%), Positives = 72/128 (56%)
Query: 38 HAVELEQSFMEGAYNRVLSA--KQNVPNETYGYFMDLLAKTVRDEIAGCSEKAYDYLSIK 95
+ + LE+ MEG+Y+RV A K VP E YG F ++L +R EIA SE+AY L I
Sbjct: 167 YPIRLERWLMEGSYDRVWKAMKKGEVPCEEYGVFSEILTIQIRAEIASSSERAYPSLPIS 226
Query: 96 DAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQKA--KDSAPCKEIPSLQLINQTLSY 153
+L S+ ++E+ K W ++DG ++F A +D P K + SL I TL Y
Sbjct: 227 STKSLLFLESEGAVVEFAKRRG--WTVRDGHIYFPTAGAEDGEPEKPV-SLSFIENTLGY 283
Query: 154 ARELERIV 161
ARELE IV
Sbjct: 284 ARELETIV 291
>POMBASE|SPBC16G5.01 [details] [associations]
symbol:rpn12 "19S proteasome regulatory subunit Rpn12"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=ISO] InterPro:IPR006746 PomBase:SPBC16G5.01 Pfam:PF03399
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0008541 GO:GO:0006511
InterPro:IPR005062 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 OMA:SENKHLM EMBL:X92682 PIR:T40280
RefSeq:NP_596750.2 PDB:4B0Z PDBsum:4B0Z ProteinModelPortal:P50524
IntAct:P50524 STRING:P50524 EnsemblFungi:SPBC16G5.01.1
GeneID:2540025 KEGG:spo:SPBC16G5.01 OrthoDB:EOG483HF4
NextBio:20801168 Uniprot:P50524
Length = 270
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 52/168 (30%), Positives = 87/168 (51%)
Query: 13 QNRIAEFHXXXXXX--XXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFM 70
+NRIAEFH +P ++ + LEQ+ MEGA+++V S ++ + YFM
Sbjct: 105 ENRIAEFHTALESVPDKSLFERDPYVEWVISLEQNVMEGAFDKVASMIRSCNFPEFSYFM 164
Query: 71 DLLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQ 130
++ VR+EIA C+EK Y + + +A +L + +E E + EE W+++DG ++F
Sbjct: 165 KIVMSMVRNEIATCAEKVYSEIPLSNATSLLYLENTKET-EKLAEERG-WDIRDGVIYFP 222
Query: 131 KAKDSAPCK-----------EIP------SLQLINQTLSYARELERIV 161
K ++ + E+P ++ I Q LSY ELE+IV
Sbjct: 223 KEANALETEDGMLIDEEDELELPPTASKHTISSIRQLLSYTSELEQIV 270
>GENEDB_PFALCIPARUM|PFC0520w [details] [associations]
symbol:PFC0520w "26S proteasome regulatory
subunit S14, putative" species:5833 "Plasmodium falciparum"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR006746 Pfam:PF03399 GO:GO:0006508
EMBL:AL844502 InterPro:IPR005062 GO:GO:0005838 HOGENOM:HOG000196008
KO:K03031 PANTHER:PTHR12387 OMA:TEDQDAF PIR:T18458
RefSeq:XP_001351196.1 ProteinModelPortal:O77345
EnsemblProtists:PFC0520w:mRNA GeneID:814438 KEGG:pfa:PFC0520w
EuPathDB:PlasmoDB:PF3D7_0312300 ProtClustDB:CLSZ2433064
Uniprot:O77345
Length = 304
Score = 179 (68.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 45/158 (28%), Positives = 83/158 (52%)
Query: 14 NRIAEFHXXXXXXXXXXXXNPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDLL 73
N I +FH + IK+ + +EQ+ M+G ++ VL+ K+N+P Y FMD L
Sbjct: 149 NSIGDFHMTLEILPLEDHNDIYIKYVLNVEQNIMDGFFHHVLTKKENIPLYLYESFMDKL 208
Query: 74 AKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYV------KEEHPEW----EMK 123
T+R ++ C + + + + A ++L ++ Q L +++ K E+ E+K
Sbjct: 209 YTTIRFKLIDCIFASTNSIHLLYACELLKLSNQQNLNDFIIQYNEAKNNQGEYNAVCEIK 268
Query: 124 DGFVFFQKAKDSAPCKEIPSLQLINQTLSYARELERIV 161
D + + + +++PSL++IN ++ YA ELERIV
Sbjct: 269 DNHIVCKN--QTIAVQQLPSLEIINNSIGYATELERIV 304
>CGD|CAL0003893 [details] [associations]
symbol:orf19.213 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR006746 CGD:CAL0003893
Pfam:PF03399 GO:GO:0006508 InterPro:IPR005062 GO:GO:0005838
eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031 PANTHER:PTHR12387
EMBL:AACQ01000153 EMBL:AACQ01000152 RefSeq:XP_712570.1
RefSeq:XP_712597.1 STRING:Q59SD0 GeneID:3645795 GeneID:3645826
KEGG:cal:CaO19.213 KEGG:cal:CaO19.7845 Uniprot:Q59SD0
Length = 277
Score = 158 (60.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 36 IKHAVELEQSFMEGAYNRV---LSAKQNVPNETYGYFMDLLAKTVRDEIAGCSEKAYDYL 92
++ + LE + MEG Y ++ L ++N+P + Y +F+D L +R EIA EK YD +
Sbjct: 147 LQFPINLESNLMEGNYIKIWKLLKEEKNLPCQEYTHFVDTLINALRFEIAKSLEKTYDSI 206
Query: 93 SIKDAGQMLLFT---SDQELLEYVKEEHP--EWEMKDGFVFFQKAKDSAPCKEIPSLQLI 147
I + +L SD + +KE + W+ +DG ++F K ++ + + +I
Sbjct: 207 PISNCKNLLYLPQELSDANFEKTLKETYQVDNWKFEDGVIYFTKNENET---NVDNQSVI 263
Query: 148 NQTLSYARELERIV 161
L YA ++E IV
Sbjct: 264 KNLLGYAEQIESIV 277
>UNIPROTKB|Q59SD0 [details] [associations]
symbol:RPN12 "Likely 26S proteasome regulatory particle
subunit Rpn12p" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR006746
CGD:CAL0003893 Pfam:PF03399 GO:GO:0006508 InterPro:IPR005062
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 EMBL:AACQ01000153 EMBL:AACQ01000152
RefSeq:XP_712570.1 RefSeq:XP_712597.1 STRING:Q59SD0 GeneID:3645795
GeneID:3645826 KEGG:cal:CaO19.213 KEGG:cal:CaO19.7845
Uniprot:Q59SD0
Length = 277
Score = 158 (60.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 36 IKHAVELEQSFMEGAYNRV---LSAKQNVPNETYGYFMDLLAKTVRDEIAGCSEKAYDYL 92
++ + LE + MEG Y ++ L ++N+P + Y +F+D L +R EIA EK YD +
Sbjct: 147 LQFPINLESNLMEGNYIKIWKLLKEEKNLPCQEYTHFVDTLINALRFEIAKSLEKTYDSI 206
Query: 93 SIKDAGQMLLFT---SDQELLEYVKEEHP--EWEMKDGFVFFQKAKDSAPCKEIPSLQLI 147
I + +L SD + +KE + W+ +DG ++F K ++ + + +I
Sbjct: 207 PISNCKNLLYLPQELSDANFEKTLKETYQVDNWKFEDGVIYFTKNENET---NVDNQSVI 263
Query: 148 NQTLSYARELERIV 161
L YA ++E IV
Sbjct: 264 KNLLGYAEQIESIV 277
>SGD|S000001948 [details] [associations]
symbol:RPN12 "Subunit of the 19S regulatory particle of the
26S proteasome lid" species:4932 "Saccharomyces cerevisiae"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0034515 "proteasome storage granule"
evidence=IDA] [GO:0005838 "proteasome regulatory particle"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR006746
SGD:S000001948 Pfam:PF03399 EMBL:D50617 EMBL:BK006940 GO:GO:0008541
GO:GO:0006511 InterPro:IPR005062 GO:GO:0034515 PDB:4B4T PDBsum:4B4T
eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031 PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:SENKHLM OrthoDB:EOG483HF4
EMBL:D10515 PIR:S27434 RefSeq:NP_116710.1 ProteinModelPortal:P32496
DIP:DIP-1575N IntAct:P32496 MINT:MINT-384687 STRING:P32496
PaxDb:P32496 PeptideAtlas:P32496 EnsemblFungi:YFR052W GeneID:850613
KEGG:sce:YFR052W NextBio:966505 Genevestigator:P32496
GermOnline:YFR052W Uniprot:P32496
Length = 274
Score = 139 (54.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 37/137 (27%), Positives = 72/137 (52%)
Query: 36 IKHAVELEQSFMEGAYNR----VLSAKQNVPNETYGYFMDLLAKTVRDEIAGCSEKAYDY 91
+ + ++L++ MEG+Y + + S QN+ + F D+L +RDEIA +E +YD+
Sbjct: 142 LSYPIKLDRWLMEGSYQKAWDLLQSGSQNISE--FDSFTDILKSAIRDEIAKNTELSYDF 199
Query: 92 LSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFF-----QKA--KDSAPCKEIPSL 144
L + + +L F +++E ++ E + W + + V+F +KA +D +E
Sbjct: 200 LPLSNIKALLFFNNEKETEKFALERN--WPIVNSKVYFNNQSKEKADYEDEMMHEEDQKT 257
Query: 145 QLINQTLSYARELERIV 161
+I + + YA +E IV
Sbjct: 258 NIIEKAMDYAISIENIV 274
>UNIPROTKB|K7EK21 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR006746 EMBL:AC005789 PANTHER:PTHR12387 HGNC:HGNC:9566
Ensembl:ENST00000590331 Uniprot:K7EK21
Length = 63
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 47 MEGAYNRVLSAKQNVPNETYGYFMDLLAKTVRD 79
MEG+YN+V AK N+P E+Y +F+D+L T+ +
Sbjct: 3 MEGSYNKVFLAKGNIPAESYTFFIDILLDTISE 35
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 161 140 0.00091 102 3 11 22 0.43 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 578 (61 KB)
Total size of DFA: 139 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.24u 0.13s 15.37t Elapsed: 00:00:01
Total cpu time: 15.25u 0.13s 15.38t Elapsed: 00:00:01
Start: Fri May 10 22:23:11 2013 End: Fri May 10 22:23:12 2013