BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031345
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FHY0|RP12B_ARATH 26S proteasome non-ATPase regulatory subunit RPN12B OS=Arabidopsis
thaliana GN=RPN12B PE=2 SV=2
Length = 233
Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 131/161 (81%), Positives = 146/161 (90%)
Query: 1 MILGLNLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSAKQN 60
+I+GLNLLRLLVQNRIAEFHTEL LLSS LENPCIKHAVELEQSFMEGAYNRVLSA+Q
Sbjct: 73 LIMGLNLLRLLVQNRIAEFHTELGLLSSATLENPCIKHAVELEQSFMEGAYNRVLSARQT 132
Query: 61 VPNETYGYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEW 120
P+ETY YFMDLLAKT+RDEIAGCSEKAYD+LSI + +MLLF+SDQ+LL YV EEHPEW
Sbjct: 133 APDETYVYFMDLLAKTIRDEIAGCSEKAYDHLSISEGCKMLLFSSDQQLLTYVNEEHPEW 192
Query: 121 EMKDGFVFFQKAKDSAPCKEIPSLQLINQTLSYARELERIV 161
E+KDG V FQK +++APCKEIPSLQLINQTLSY RELERI+
Sbjct: 193 EVKDGLVVFQKTRETAPCKEIPSLQLINQTLSYTRELERIL 233
>sp|Q9SGW3|RP12A_ARATH 26S proteasome non-ATPase regulatory subunit RPN12A OS=Arabidopsis
thaliana GN=RPN12A PE=1 SV=1
Length = 267
Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/150 (85%), Positives = 139/150 (92%)
Query: 12 VQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
VQNRIAEFHTELELLSS LE+PCIKHAVELEQSFMEGAYNRVLSA+Q P+ TY YFMD
Sbjct: 118 VQNRIAEFHTELELLSSATLEDPCIKHAVELEQSFMEGAYNRVLSARQTAPDATYVYFMD 177
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQK 131
LLAKT+RDEIAGCSEKAYDY+SI DA QMLLF+SDQELL YV +EHPEWE+K+GFV FQK
Sbjct: 178 LLAKTIRDEIAGCSEKAYDYVSISDARQMLLFSSDQELLTYVTDEHPEWEVKEGFVVFQK 237
Query: 132 AKDSAPCKEIPSLQLINQTLSYARELERIV 161
AK++APCKEIPSLQLINQTLSYARELERIV
Sbjct: 238 AKETAPCKEIPSLQLINQTLSYARELERIV 267
>sp|P02889|PSMD8_DICDI Probable 26S proteasome non-ATPase regulatory subunit 8
OS=Dictyostelium discoideum GN=psmD8-1 PE=3 SV=2
Length = 263
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 114/160 (71%), Gaps = 4/160 (2%)
Query: 2 ILGLNLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSAKQNV 61
I+GLNL+RLL +++ +EFH+E+EL+ L+N IK + +E+S EG+YN+++ ++ V
Sbjct: 108 IIGLNLMRLLAKHKTSEFHSEIELIEFNNLDNSFIKFPLLVEKSITEGSYNKIIQSRSGV 167
Query: 62 PNETYGYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWE 121
P+E Y F+D+LA +++++IA CSEK++ LS+KDA ++LLF + + +Y+KE + W+
Sbjct: 168 PSEYYQVFLDILADSIKEDIANCSEKSFKTLSLKDAEKVLLFNDNNQFQQYIKERN--WK 225
Query: 122 MKDGFVFFQKAKDSAPCKEIPSLQLINQTLSYARELERIV 161
++ + F + EIPSLQLI+QTL YA+ELERIV
Sbjct: 226 VQGDVIQF--GNNDNQTVEIPSLQLIHQTLHYAKELERIV 263
>sp|Q9CX56|PSMD8_MOUSE 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus
GN=Psmd8 PE=1 SV=2
Length = 353
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 101/155 (65%), Gaps = 12/155 (7%)
Query: 13 QNRIAEFHTELELLSSTALE-NPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFHTELE L + ++ N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 205 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 264
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFF- 129
+L T+RDEIAGC EKAY+ + +A ++L F++ +++ +Y K+ W + + + F
Sbjct: 265 ILLDTIRDEIAGCIEKAYEKILFAEATRILFFSTPKKMTDYAKKRG--WVLGPNNYYSFA 322
Query: 130 ---QKAKDSAPCKEIPSLQLINQTLSYARELERIV 161
QK +DS IPS +L Q + YAR+LE IV
Sbjct: 323 SQQQKPEDST----IPSTELAKQVIEYARQLEMIV 353
>sp|Q5RE15|PSMD8_PONAB 26S proteasome non-ATPase regulatory subunit 8 (Fragment) OS=Pongo
abelii GN=PSMD8 PE=2 SV=2
Length = 289
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 13 QNRIAEFHTELELLSSTALE-NPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFHTELE L + ++ N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 141 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYAFFID 200
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 201 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGPNNYYSFA 258
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 259 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 289
>sp|Q3SYT7|PSMD8_BOVIN 26S proteasome non-ATPase regulatory subunit 8 OS=Bos taurus
GN=PSMD8 PE=2 SV=3
Length = 287
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 99/153 (64%), Gaps = 8/153 (5%)
Query: 13 QNRIAEFHTELELLSSTALE-NPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFHTELE L + ++ N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 139 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 198
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFF-- 129
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ + + + F
Sbjct: 199 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGINNYYSFASQ 258
Query: 130 -QKAKDSAPCKEIPSLQLINQTLSYARELERIV 161
QK +D+ IPS +L Q + YAR+LE IV
Sbjct: 259 QQKPEDTT----IPSTELAKQVIEYARQLEMIV 287
>sp|P48556|PSMD8_HUMAN 26S proteasome non-ATPase regulatory subunit 8 OS=Homo sapiens
GN=PSMD8 PE=1 SV=2
Length = 350
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 13 QNRIAEFHTELELLSSTALE-NPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMD 71
QNR+AEFHTELE L + ++ N IKH V LEQ MEG+YN+V AK N+P E+Y +F+D
Sbjct: 202 QNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFID 261
Query: 72 LLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEM-KDGFVFFQ 130
+L T+RDEIAGC EKAY+ + +A ++L F + +++ +Y K+ W + + + F
Sbjct: 262 ILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRG--WVLGPNNYYSFA 319
Query: 131 KAKDSAPCKEIPSLQLINQTLSYARELERIV 161
+ IPS +L Q + YAR+LE IV
Sbjct: 320 SQQQKPEDTTIPSTELAKQVIEYARQLEMIV 350
>sp|P50524|RPN12_SCHPO 26S proteasome regulatory subunit rpn12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpn12 PE=1 SV=1
Length = 270
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 21/180 (11%)
Query: 1 MILGLNLLRLLVQNRIAEFHTELELLSSTAL--ENPCIKHAVELEQSFMEGAYNRVLSAK 58
++ GLNLL LL +NRIAEFHT LE + +L +P ++ + LEQ+ MEGA+++V S
Sbjct: 93 LVTGLNLLYLLSENRIAEFHTALESVPDKSLFERDPYVEWVISLEQNVMEGAFDKVASMI 152
Query: 59 QNVPNETYGYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHP 118
++ + YFM ++ VR+EIA C+EK Y + + +A +L + +E E + EE
Sbjct: 153 RSCNFPEFSYFMKIVMSMVRNEIATCAEKVYSEIPLSNATSLLYLENTKE-TEKLAEERG 211
Query: 119 EWEMKDGFVFFQKAKDS-----------------APCKEIPSLQLINQTLSYARELERIV 161
W+++DG ++F K ++ P ++ I Q LSY ELE+IV
Sbjct: 212 -WDIRDGVIYFPKEANALETEDGMLIDEEDELELPPTASKHTISSIRQLLSYTSELEQIV 270
>sp|Q23449|PSMD8_CAEEL 26S proteasome non-ATPase regulatory subunit 8 OS=Caenorhabditis
elegans GN=rpn-12 PE=1 SV=1
Length = 250
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 101/164 (61%), Gaps = 7/164 (4%)
Query: 1 MILGLNLLRLLVQNRIAEFHTELELLSST-ALENPCIKHAVELEQSFMEGAYNRVLSAKQ 59
++ GL+L+ LL NR+++FH LE + N I V +EQS MEGAYN+V+ ++
Sbjct: 91 LMTGLHLMFLLAANRLSDFHMLLEQIPQKEQTSNAYISTPVRIEQSLMEGAYNKVVLTEK 150
Query: 60 NVPNETYGYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPE 119
N+P+ Y F+ ++ T+R EIA EK++ L+ KDA MLLF +D+++ ++ +E +
Sbjct: 151 NIPSPFYTIFIRIMLDTIRREIATSIEKSFKVLTAKDATVMLLFDNDEQMKKFGQER--K 208
Query: 120 WEMKDG--FVFFQKAKDSAPCKEIPSLQLINQTLSYARELERIV 161
W + DG +VF + P + ++++ QTL YA++LE+IV
Sbjct: 209 WHL-DGERYVFEIEVAQEKPVN-LDTVRVATQTLFYAKQLEQIV 250
>sp|P32496|RPN12_YEAST 26S proteasome regulatory subunit RPN12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN12 PE=1 SV=3
Length = 274
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 17 AEFHTELELLSS---TALENPCIKHAVELEQSFMEGAYNRVL----SAKQNVPNETYGYF 69
+FH+EL+ L ++ + + ++L++ MEG+Y + S QN+ + F
Sbjct: 120 TKFHSELQYLDKHIKNLEDDSLLSYPIKLDRWLMEGSYQKAWDLLQSGSQNI--SEFDSF 177
Query: 70 MDLLAKTVRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFF 129
D+L +RDEIA +E +YD+L + + +L F +++E ++ E + W + + V+F
Sbjct: 178 TDILKSAIRDEIAKNTELSYDFLPLSNIKALLFFNNEKETEKFALERN--WPIVNSKVYF 235
Query: 130 -----QKA--KDSAPCKEIPSLQLINQTLSYARELERIV 161
+KA +D +E +I + + YA +E IV
Sbjct: 236 NNQSKEKADYEDEMMHEEDQKTNIIEKAMDYAISIENIV 274
>sp|Q54EQ1|EIF3K_DICDI Eukaryotic translation initiation factor 3 subunit K
OS=Dictyostelium discoideum GN=eif3K PE=3 SV=2
Length = 246
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 77 VRDEIAGCSEKAYDYLSIKDAGQMLLFTSDQELLEYVKEEHPEWEMKDGFVFFQ 130
+R+ I+G Y +SI G++L + +L++Y++ + P W++ D V Q
Sbjct: 167 IRNFISGVLSITYQNISITMLGELLNLSDRTQLVDYIQSKQPTWKISDSTVSLQ 220
>sp|A4QNR8|LENG8_DANRE Leukocyte receptor cluster member 8 homolog OS=Danio rerio GN=leng8
PE=2 SV=1
Length = 839
Score = 34.7 bits (78), Expect = 0.26, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 17 AEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDLLAKT 76
+ TEL L++ +PC+ HA+EL ++ G ++R Q P Y +D +
Sbjct: 716 GDLTTELVYLTTELRADPCVAHALELRTAWALGNFHRFFRLYQKAPRMA-AYLIDKFVER 774
Query: 77 VRD 79
R+
Sbjct: 775 ERN 777
>sp|Q96PV6|LENG8_HUMAN Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=2
SV=2
Length = 779
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 21 TELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPNETYGYFMDLLAKTVR 78
TEL L+ +PC+ HA+ L ++ G Y+R + P + GY +D A R
Sbjct: 644 TELAYLTRELKADPCVAHALALRTAWALGNYHRFFRLYCHAPCMS-GYLVDKFADRER 700
>sp|P47521|Y279_MYCGE Uncharacterized protein MG279 OS=Mycoplasma genitalium (strain
ATCC 33530 / G-37 / NCTC 10195) GN=MG279 PE=4 SV=1
Length = 218
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 14 NRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
N+I+E++TE++ +S +N +K E+E+S EG
Sbjct: 47 NKISEYNTEIKKISQNIFQNNLVKTLSEVEKSLNEG 82
>sp|Q02H37|SECA_PSEAB Protein translocase subunit SecA OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=secA PE=3 SV=1
Length = 916
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 6 NLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
NL+R+ +R+ F L + S A+E+ + +A+E Q +EG
Sbjct: 593 NLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEG 636
>sp|Q9LCT3|SECA_PSEAE Protein translocase subunit SecA OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=secA
PE=3 SV=1
Length = 916
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 6 NLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
NL+R+ +R+ F L + S A+E+ + +A+E Q +EG
Sbjct: 593 NLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEG 636
>sp|B7UZI1|SECA_PSEA8 Protein translocase subunit SecA OS=Pseudomonas aeruginosa (strain
LESB58) GN=secA PE=3 SV=1
Length = 916
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 6 NLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
NL+R+ +R+ F L + S A+E+ + +A+E Q +EG
Sbjct: 593 NLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEG 636
>sp|A4XQT3|SECA_PSEMY Protein translocase subunit SecA OS=Pseudomonas mendocina (strain
ymp) GN=secA PE=3 SV=2
Length = 911
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 6 NLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
NL+R+ +R+ F L + S A+E+ + +A+E Q +EG
Sbjct: 593 NLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEG 636
>sp|A6VB75|SECA_PSEA7 Protein translocase subunit SecA OS=Pseudomonas aeruginosa (strain
PA7) GN=secA PE=3 SV=1
Length = 916
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 6 NLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
NL+R+ +R+ F L + S A+E+ + +A+E Q +EG
Sbjct: 593 NLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEG 636
>sp|Q0AH18|SECA_NITEC Protein translocase subunit SecA OS=Nitrosomonas eutropha (strain
C91) GN=secA PE=3 SV=1
Length = 909
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 7 LLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFME 48
LLR+ +R+A T L++ A+E+P + A+E Q +E
Sbjct: 596 LLRIFSSDRVANIMTRLKMPEGEAIEHPWVTRAIENAQRKVE 637
>sp|Q82W86|SECA_NITEU Protein translocase subunit SecA OS=Nitrosomonas europaea (strain
ATCC 19718 / NBRC 14298) GN=secA PE=3 SV=1
Length = 909
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 7 LLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
LLR+ +R+A T L++ A+E+P + A+E Q +E
Sbjct: 596 LLRIFSSDRVANIMTRLKMPEGEAIEHPWVTRAIENAQRKVEA 638
>sp|C1DQA8|SECA_AZOVD Protein translocase subunit SecA OS=Azotobacter vinelandii (strain
DJ / ATCC BAA-1303) GN=secA PE=3 SV=1
Length = 915
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 6 NLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEG 49
NL+R+ +R+ F L + + A+E+ + +A+E Q +EG
Sbjct: 593 NLMRIFASDRVKNFMKALGMQAGEAIEHRMVTNAIEKAQRKVEG 636
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,100,905
Number of Sequences: 539616
Number of extensions: 2158718
Number of successful extensions: 6447
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6410
Number of HSP's gapped (non-prelim): 30
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)