Query 031349
Match_columns 161
No_of_seqs 31 out of 33
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 20:37:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031349.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031349hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2diia1 a.240.1.1 (A:8-55) TFI 64.8 0.26 1.9E-05 31.3 -1.9 26 95-120 2-27 (48)
2 d1ywfa1 c.45.1.5 (A:4-275) Pho 35.9 15 0.0011 26.7 3.5 43 55-105 157-199 (272)
3 d1ppjg_ f.23.13.1 (G:) Ubiquin 24.7 9.7 0.0007 25.0 0.6 17 137-153 6-22 (75)
4 d1guqa2 d.13.1.2 (A:178-348) G 14.2 30 0.0022 23.0 1.3 24 87-115 19-42 (171)
5 d2io8a1 c.30.1.7 (A:379-496) G 12.8 24 0.0018 24.3 0.4 16 137-152 51-66 (118)
6 d1xria_ c.45.1.1 (A:) Putative 10.3 1.5E+02 0.011 18.8 3.9 42 55-104 99-140 (151)
7 d1ve4a1 c.94.1.1 (A:1-206) ATP 10.1 14 0.001 27.1 -1.7 38 102-139 105-142 (206)
8 d1mlwa_ d.178.1.1 (A:) Tryptop 9.2 27 0.002 27.6 -0.4 15 118-132 210-224 (290)
9 d1h3da1 c.94.1.1 (A:5-224) ATP 8.9 33 0.0024 25.3 -0.0 19 106-124 121-139 (220)
10 d1j8ua_ d.178.1.1 (A:) Phenyla 8.3 30 0.0022 27.6 -0.5 14 119-132 210-223 (307)
No 1
>d2diia1 a.240.1.1 (A:8-55) TFIIH basal transcription factor complex p62 subunit, BTF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.77 E-value=0.26 Score=31.29 Aligned_cols=26 Identities=31% Similarity=0.529 Sum_probs=20.5
Q ss_pred Hhhhhhhhhhhhhhccccccchhhee
Q 031349 95 RSKANKELNDQKRLATSGANFARAYT 120 (161)
Q Consensus 95 KSkaNKELNDKkRlaTs~aNfaRayt 120 (161)
|.|+||||.+|-||...+...---|.
T Consensus 2 k~k~~keLeEKnr~L~enp~L~qLYk 27 (48)
T d2diia1 2 KRKANKELEEKNRMLQEDPVLFQLYK 27 (48)
T ss_dssp CCCSCHHHHHHHHHHHHCHHHHHHHH
T ss_pred chhHHHHHHHHhhccccCHHHHHHHH
Confidence 57899999999999888776554443
No 2
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.92 E-value=15 Score=26.75 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=28.2
Q ss_pred ccCCchhHHHHHHHHHHHHHhhhhhcccccchhhHHHHHHHhhhhhhhhhh
Q 031349 55 SRGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQ 105 (161)
Q Consensus 55 ~r~~~gRRaal~~LAa~l~~tAa~a~a~~A~Agv~~dyL~KSkaNKELNDK 105 (161)
+.+|..|- +++++|+..+ .+..+..+++||+.-.....+.+++
T Consensus 157 CtaGKDRT----G~~aallL~l----lGV~~e~I~~DYllSn~~~~~~~~~ 199 (272)
T d1ywfa1 157 CFAGKDRT----GFVVALVLEA----VGLDRDVIVADYLRSNDSVPQLRAR 199 (272)
T ss_dssp CSSSSSHH----HHHHHHHHHH----TTCCHHHHHHHHHGGGGGHHHHHHH
T ss_pred cCCCCcch----HHHHHHHHHH----cCCCHHHHHHHHHhhhhhhHHHHHH
Confidence 44455554 3444455454 7788999999999876666665554
No 3
>d1ppjg_ f.23.13.1 (G:) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.74 E-value=9.7 Score=24.97 Aligned_cols=17 Identities=29% Similarity=0.589 Sum_probs=15.5
Q ss_pred hhhhhcceeeeeeccce
Q 031349 137 DLAKQKVFIRFKLYPFI 153 (161)
Q Consensus 137 dLAk~k~~~~~~~~~~~ 153 (161)
+|+|++.++.|.|-||=
T Consensus 6 ~L~k~rgiitYsLSPfe 22 (75)
T d1ppjg_ 6 HLTRVRHVITYSLSPFE 22 (75)
T ss_dssp SSCCCEEEEEEEECGGG
T ss_pred cceeeccEEEEEeChhh
Confidence 78999999999999983
No 4
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]}
Probab=14.24 E-value=30 Score=22.95 Aligned_cols=24 Identities=21% Similarity=0.475 Sum_probs=17.3
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccccccc
Q 031349 87 GVIDEYLERSKANKELNDQKRLATSGANF 115 (161)
Q Consensus 87 gv~~dyL~KSkaNKELNDKkRlaTs~aNf 115 (161)
.|+.|++ ++|+.+++|++-.+++|
T Consensus 19 clfcdii-----~~E~~~~~RiV~e~e~~ 42 (171)
T d1guqa2 19 PMLVDYV-----QRELADGSRTVVETEHW 42 (171)
T ss_dssp CHHHHHH-----HHHHHHCTTEEEECSSE
T ss_pred CcHHHHH-----HhhccCCCeEEEECCeE
Confidence 3555555 47899999998777665
No 5
>d2io8a1 c.30.1.7 (A:379-496) Glutathionylspermidine synthase, synthetase domain {Escherichia coli [TaxId: 562]}
Probab=12.84 E-value=24 Score=24.30 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=12.1
Q ss_pred hhhhhcceeeeeeccc
Q 031349 137 DLAKQKVFIRFKLYPF 152 (161)
Q Consensus 137 dLAk~k~~~~~~~~~~ 152 (161)
|+-.+.-...|||||+
T Consensus 51 D~d~~~I~~~fKLyPW 66 (118)
T d2io8a1 51 DGEGRLVNCVWKTWAW 66 (118)
T ss_dssp CTTSCBCCEEEESSCH
T ss_pred CCCCCChhhhheecCH
Confidence 4555666789999996
No 6
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=10.29 E-value=1.5e+02 Score=18.77 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=25.7
Q ss_pred ccCCchhHHHHHHHHHHHHHhhhhhcccccchhhHHHHHHHhhhhhhhhh
Q 031349 55 SRGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELND 104 (161)
Q Consensus 55 ~r~~~gRRaal~~LAa~l~~tAa~a~a~~A~Agv~~dyL~KSkaNKELND 104 (161)
+..|.+|-+.+.++.- .+ .+.....+++||+.-.-.....+|
T Consensus 99 C~~GkdRTG~v~a~~l----~~----~g~~~~~i~~dy~~~~~~~~~~~~ 140 (151)
T d1xria_ 99 CKRGKHRTGCLVGCLR----KL----QKWCLTSIFDEYQRFAAAKARVSD 140 (151)
T ss_dssp CSSSSSHHHHHHHHHH----HH----TTBCHHHHHHHHHHHHGGGCCHHH
T ss_pred cCCCchHHHHHHHHHH----HH----cCCCHHHHHHHHHHhccCcccHHH
Confidence 5567777665443332 22 677889999999875544333333
No 7
>d1ve4a1 c.94.1.1 (A:1-206) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=10.08 E-value=14 Score=27.14 Aligned_cols=38 Identities=24% Similarity=0.213 Sum_probs=24.9
Q ss_pred hhhhhhhccccccchhheeeeecceecCCCccchhhhh
Q 031349 102 LNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLA 139 (161)
Q Consensus 102 LNDKkRlaTs~aNfaRaytv~fG~ckfP~nf~gcqdLA 139 (161)
..+-+|.||.+.|..|.|-..-|.=-.-....|+-|+|
T Consensus 105 ~~~~~rIATkYpnit~~~~~~~gi~~~ii~~~Gs~E~a 142 (206)
T d1ve4a1 105 TGPIRRVATKYPNFTARLLKERGWAADVVELSGNIELA 142 (206)
T ss_dssp CSCCCEEEESCHHHHHHHHHHTTCCCEEEECSSCTHHH
T ss_pred cCCccEeeHHHHHHHHHHHHhcCCcceEEEEEcccccc
Confidence 44557999999999999877666432223344555554
No 8
>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.25 E-value=27 Score=27.58 Aligned_cols=15 Identities=40% Similarity=0.800 Sum_probs=11.8
Q ss_pred heeeeecceecCCCc
Q 031349 118 AYTVQFGTCKFPENF 132 (161)
Q Consensus 118 aytv~fG~ckfP~nf 132 (161)
=|||+||.|+=+.+.
T Consensus 210 WfTVEFGLi~e~g~l 224 (290)
T d1mlwa_ 210 FFTVEFGLCKQDGQL 224 (290)
T ss_dssp HTTTTTCEEEETTEE
T ss_pred eeeEeeeEEecCCcc
Confidence 369999999976543
No 9
>d1h3da1 c.94.1.1 (A:5-224) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Escherichia coli [TaxId: 562]}
Probab=8.88 E-value=33 Score=25.28 Aligned_cols=19 Identities=42% Similarity=0.489 Sum_probs=16.5
Q ss_pred hhhccccccchhheeeeec
Q 031349 106 KRLATSGANFARAYTVQFG 124 (161)
Q Consensus 106 kRlaTs~aNfaRaytv~fG 124 (161)
+|.||.+.|..|.|-..-|
T Consensus 121 ~RIATkYp~it~~y~~~~g 139 (220)
T d1h3da1 121 KRIATSYPHLLKRYLDQKG 139 (220)
T ss_dssp CEEEESCHHHHHHHHHHHT
T ss_pred CEEhhhhhHHHHHHHHhcc
Confidence 5999999999999976665
No 10
>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.32 E-value=30 Score=27.61 Aligned_cols=14 Identities=43% Similarity=0.954 Sum_probs=11.4
Q ss_pred eeeeecceecCCCc
Q 031349 119 YTVQFGTCKFPENF 132 (161)
Q Consensus 119 ytv~fG~ckfP~nf 132 (161)
|||+||.|+=+...
T Consensus 210 fTVEFGL~~e~g~~ 223 (307)
T d1j8ua_ 210 FTVEFGLCKQGDSI 223 (307)
T ss_dssp HTTTTCEEEETTEE
T ss_pred eeEEeeeeccCCCc
Confidence 69999999976543
Done!