BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031351
         (161 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P20144|WUN1_SOLTU Wound-induced protein 1 OS=Solanum tuberosum GN=WUN1 PE=2 SV=1
          Length = 105

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 58  VRLLTGES--SKATFKFEPRSVEVVGDCVIAEGWEGAPAY-WVHVWTVNVKDGLITQFRE 114
           +++LTG +    A+F+F  ++++V G  V+ EG +   +  WVH WTV   DG+ITQ RE
Sbjct: 1   MQILTGTAKFDNASFQFLHKTIDVFGSVVLVEGCDPTRSITWVHAWTVT--DGVITQVRE 58

Query: 115 YFNTWLTVKDLRPPRWEIRVRHERNTLWQSQPRDLARRSLPSLLLTI 161
           YFNT LTV                 ++W+S   +   +S+P L+L +
Sbjct: 59  YFNTSLTVTRFGKSDISSITTLHCPSVWESSLPNRVGKSVPGLVLAL 105


>sp|O33283|EPHG_MYCTU Epoxide hydrolase EphG OS=Mycobacterium tuberculosis GN=ephG PE=1
           SV=1
          Length = 149

 Score = 32.7 bits (73), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 12/122 (9%)

Query: 15  QNQEAI--VKALYKALANDEMENVAKYLASDLEY---WFHGPPTCQHMVRLLTGESSKAT 69
           +  EAI  V+A   AL N++ + V   L  DL Y    F      +    LL     +  
Sbjct: 13  ETTEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRVG 72

Query: 70  FKFEPRSVEVVGDCVIAEGWEG---AP---AYWVHVWTVNVKDGLITQFREYFNTWLTVK 123
           F+ +   +   G  V+ E  +     P    +WV      V DG IT +R+YF+ +   K
Sbjct: 73  FEVKIHRIGADGAAVLTERTDALIIGPLRVQFWV-CGVFEVDDGRITLWRDYFDVYDMFK 131

Query: 124 DL 125
            L
Sbjct: 132 GL 133


>sp|Q12ZU8|RL2_METBU 50S ribosomal protein L2P OS=Methanococcoides burtonii (strain DSM
           6242) GN=rpl2p PE=3 SV=1
          Length = 237

 Score = 32.7 bits (73), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 7   NVETSMAEQNQEAIVKALYKALANDEMENVAKYLASDLEYWFHGPPTCQHMVRLLTG 63
           N+E+   +  Q A    +Y  L + E+  V   + S +  WFH  P C+  + ++ G
Sbjct: 108 NIESKPNDGGQYARSSGVYATLVSRELSKVVVRMPSGVLKWFH--PKCRATIGIVAG 162


>sp|Q8SR10|SYQ_ENCCU Probable glutamine--tRNA ligase OS=Encephalitozoon cuniculi (strain
           GB-M1) GN=ECU10_1460 PE=3 SV=1
          Length = 697

 Score = 31.6 bits (70), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 61  LTGESSKATFKFEP-RSVEVVGDCVIAEGWEGAPAYWVHVWTVNVKDGLITQFREYFNTW 119
           LT E     +   P R V+V  D ++AE W+G P  ++H W    +D +  + R Y + W
Sbjct: 571 LTPEQPVGLYMLYPIRVVKVTPDGIVAERWDGVPRKFIH-WV--SEDSVEVEMRMYSSLW 627

Query: 120 LT 121
            +
Sbjct: 628 TS 629


>sp|B1L224|SYP_CLOBM Proline--tRNA ligase OS=Clostridium botulinum (strain Loch Maree /
           Type A3) GN=proS PE=3 SV=1
          Length = 478

 Score = 30.8 bits (68), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 6   NNVETSMAEQNQEAIVKALYKALANDEMENVAKYLASDLEYWFHGPPTCQHMVRLLTGES 65
           + +  SM E+ ++A  +  Y A   +E E++ +     ++  + G   C+  +R +TG +
Sbjct: 387 DTIHNSMLEEARKARDEKTYVATTMEEFEDIIENKPGFIKAMWCGDRACEDKIREVTGAT 446

Query: 66  SKATFKFEPRSVEVVGDCVIAEG 88
           S+      P   EVV D  +  G
Sbjct: 447 SRCM----PFEQEVVSDTCVCCG 465


>sp|C3KUV8|SYP_CLOB6 Proline--tRNA ligase OS=Clostridium botulinum (strain 657 / Type
           Ba4) GN=proS PE=3 SV=1
          Length = 478

 Score = 30.4 bits (67), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 8   VETSMAEQNQEAIVKALYKALANDEMENVAKYLASDLEYWFHGPPTCQHMVRLLTGESSK 67
           +  SM E+ +++  +  Y A+  +E E++ +     ++  + G   C+  +R +TG +S+
Sbjct: 389 IHNSMLEEARKSRDEKTYVAITMEEFEDIIENKPGFIKAMWCGDRACEDKIREVTGATSR 448

Query: 68  ATFKFEPRSVEVVGDCVIAEG 88
                 P   EVV D  +  G
Sbjct: 449 CM----PFEQEVVSDTCVCCG 465


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.132    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,451,458
Number of Sequences: 539616
Number of extensions: 2323438
Number of successful extensions: 4895
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4891
Number of HSP's gapped (non-prelim): 8
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)