BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031352
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1
Length = 219
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Query: 2 CAIFLTPIIALGLIFLILWLGLRPHAPKFHIHEFSVPGLSLGQPNGFQNASVSFNVTARN 61
C L+ I GL L LWL LR PK I F +P L PN N +++F V N
Sbjct: 15 CTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALG-KDPNSRDNTTLNFMVRCDN 73
Query: 62 PNRRVRILYES--LDGSVYYRDYQVGSVLLLNSFKQDPKNTTTLQYEVSGAMMMSTVSNQ 119
PN+ I Y+ L+ S S L+L PK + + + ++NQ
Sbjct: 74 PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133
Query: 120 SWAEFTNDRERGTVIFRLQFKSVIQYQKV 148
+ G+ +FRL K+ ++++ V
Sbjct: 134 TVLRAV--LPNGSAVFRLDLKTQVRFKIV 160
>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana
GN=At1g08160 PE=2 SV=1
Length = 221
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 18 ILWLGLRPHAPKFHIHEFSVPGLSLGQPNGFQNASVSFNVTARNPNRRVRILYESLDGSV 77
I +L LRP + + SV ++G + NA S+ + + NP + V + Y S+ S
Sbjct: 57 ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIST 116
Query: 78 YYRDYQVGSVLLLNSFKQDPKNTTTLQYE-VSGAMMMSTVSNQSWAEFTNDRERGTVIFR 136
+ + V ++ FKQ PKN T ++ + VS + +S + + + ++ +GT+
Sbjct: 117 AHHNQSVAH-KNISPFKQRPKNETRIETQLVSHNVALSKFNAR---DLRAEKSKGTIEME 172
Query: 137 LQFKSVIQYQ 146
+ + + Y+
Sbjct: 173 VYITARVSYK 182
>sp|Q9C615|SYP24_ARATH Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1
Length = 416
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 23 LRPHAPKFHIHEFSVPGLSLGQPNGFQNASVSFNVTARNPNRRVRILYESLDGSVYYRDY 82
+R + KF +++ + L N Q S+S N++ RN + I Y+ + +VYY +
Sbjct: 2 VRSNDVKFQVYDAELTHFDLESNNNLQ-YSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQ 60
Query: 83 QVGSVLLLNSFKQDPKNTTTLQYEVSGAMMMSTVSNQSWAEFTNDRERGTVIFRLQFKSV 142
++G+V + F KNT L+ G ++ N+ +F +D++ G ++R+ K
Sbjct: 61 RLGAV-PMPLFYLGSKNTMLLRALFEGQTLVLLKGNER-KKFEDDQKTG--VYRIDVKLS 116
Query: 143 IQYQ 146
I ++
Sbjct: 117 INFR 120
>sp|Q7Z407|CSMD3_HUMAN CUB and sushi domain-containing protein 3 OS=Homo sapiens GN=CSMD3
PE=2 SV=3
Length = 3707
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 50 NASVSFNVTARNPNRRVRILYESLDGSVYYRDYQVGSVLLLNSFKQDPKNTTTLQYEVSG 109
NA + +TA N N+ ++I +E D + Y +G + DP+ T LQ ++G
Sbjct: 571 NAQCVWVITAVNTNKVIQINFEEFDLEIGYDTLTIGDGGEVG----DPR--TVLQV-LTG 623
Query: 110 AM---MMSTVSNQSWAEFTNDRERGTVIFRLQFKSV 142
+ ++ ++S+Q W D G+V F++ +K +
Sbjct: 624 SFVPDLIVSMSSQMWLHLQTDESVGSVGFKVNYKEI 659
>sp|Q80T79|CSMD3_MOUSE CUB and sushi domain-containing protein 3 OS=Mus musculus GN=Csmd3
PE=2 SV=3
Length = 3707
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 50 NASVSFNVTARNPNRRVRILYESLDGSVYYRDYQVGSVLLLNSFKQDPKNTTTLQYEVSG 109
NA + +TA N N+ ++I +E D + Y +G + DP+ T LQ ++G
Sbjct: 571 NAQCVWVITAVNTNKVIQINFEEFDLEIGYDTLTIGDGGEVG----DPR--TVLQV-LTG 623
Query: 110 AM---MMSTVSNQSWAEFTNDRERGTVIFRLQFKSV 142
+ ++ ++ +Q W D G+V F++ +K +
Sbjct: 624 SFVPDLIVSMRSQMWLHLQTDESVGSVGFKVNYKEI 659
>sp|A6QCD6|NADD_SULNB Probable nicotinate-nucleotide adenylyltransferase OS=Sulfurovum
sp. (strain NBC37-1) GN=nadD PE=3 SV=1
Length = 188
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 56 NVTARNPNRRVRILYESLDG--SVYYRDYQV---GSVLLLNSFKQDPKNTTTLQYEVSGA 110
NV+ NP +R+ Y+ DG V DY++ SV S K NT +++Y + G+
Sbjct: 51 NVSLANPEKRLEWCYQLFDGIPKVVVDDYEIRQNKSVRTSQSVKH-FNNTYSVKYLIIGS 109
Query: 111 MMMSTVSNQSWAEFT--NDRERGTVIFR 136
+ST++ W EF ND ++ R
Sbjct: 110 DNLSTLT--KWHEFKWLNDHITWVIVTR 135
>sp|A6ZQE9|MNN5_YEAS7 Alpha-1,2-mannosyltransferase MNN5 OS=Saccharomyces cerevisiae
(strain YJM789) GN=MNN5 PE=3 SV=1
Length = 586
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 17 LILWLGLRPHAPKFHIHEFSVPGLSLGQPNGFQNASVSFNVTARNPNRRVRILYESLDGS 76
L+L L + P ++ S G + F A+ + N+ P +VR +E DG
Sbjct: 363 LLLALYYNVYGPTWYYKMISQGTAGEGDKDTFVAAAHALNM----PYYQVRTKFE-FDGF 417
Query: 77 VYYRDYQVGSVLLLNSFKQDPKNTTTLQYEVSGAM 111
Y +D G LL + F+QD K Q EV +
Sbjct: 418 FYQKDDYKGLALLQHDFEQDYKQYQKAQQEVKANI 452
>sp|P10594|INV1_YEASX Invertase 1 OS=Saccharomyces cerevisiae GN=SUC1 PE=1 SV=1
Length = 532
Score = 29.6 bits (65), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 58 TARNPNRRVRILYESLDGSVYYRDYQVGSVLLLNSFK-QDPKNTTTLQYEVSGAMMMSTV 116
T P + + SLDG + +YQ VL NS + +DPK YE S +M+
Sbjct: 132 TYNTPESEEQYISYSLDGGYTFTEYQKNPVLAANSTQFRDPK---VFWYEPSKKWIMTAA 188
Query: 117 SNQSW 121
+Q +
Sbjct: 189 KSQDY 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,179,636
Number of Sequences: 539616
Number of extensions: 2179841
Number of successful extensions: 6158
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6150
Number of HSP's gapped (non-prelim): 13
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)