BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031355
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana
GN=At3g01520 PE=1 SV=2
Length = 175
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 22 ALQWTLDHFFANSTVNPPFKLVIVHARPSPSAVIGLAGPGAVEVLPHVDSDFKKIAARVV 81
A +WTL+ ++T + FK++++H + V+ G V+ + DF+
Sbjct: 30 AFEWTLEKIVRSNTSD--FKILLLHVQ-----VVDEDGFDDVDSIYASPEDFR------- 75
Query: 82 EEAKEICSSKSVH--DFVVE------------VVEGDARNILCEAVEKHHASILVVGSHG 127
+ ++ +K +H +F V + GD ++++C+ V++ LVVGS G
Sbjct: 76 -DMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRG 134
Query: 128 YGAIKRAVLGSVSDYCAHHAHCTVMIVKR 156
G ++ +G+VS +C HA C VM +KR
Sbjct: 135 LGRFQKVFVGTVSAFCVKHAECPVMTIKR 163
>sp|Q57951|Y531_METJA Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0531 PE=3 SV=1
Length = 170
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 52 SAVIGLAGPGAVEVLPHVDSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCE 111
S +GL G+ E++ + + + A + V++ E K +H E++EG N + E
Sbjct: 66 SPFVGLPAEGSWELISELLKEEGQEALKKVKKMAEEWGVK-IH---TEMLEGVPANEIVE 121
Query: 112 AVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRPK 158
EK A ++V+G+ G ++R +LGSV++ +AHC V++VK+PK
Sbjct: 122 FAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKPK 168
>sp|P72745|Y1101_SYNY3 Universal stress protein Slr1101 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1101 PE=3 SV=1
Length = 108
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 99 EVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRP 157
E + G I+C+ ++ ++ I+VVG G + +LGSV +Y HHAHC V +V P
Sbjct: 49 EQILGSPGKIICQRAKQDNSDIIVVGHRGRWGLSEILLGSVGNYVFHHAHCCVFVVPTP 107
>sp|O53472|Y2026_MYCTU Universal stress protein Rv2026c/MT2085 OS=Mycobacterium
tuberculosis GN=Rv2026c PE=2 SV=1
Length = 294
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 12/88 (13%)
Query: 74 KKIAARVVEEAKEICSSK-------SVHDFVVEVVEGDARNILCEAVEKHHASILVVGSH 126
K A +V+E+A+E ++ VH E+V + L +A ++ A ++VVGS
Sbjct: 65 KDNAQQVIEQAREALTNSLGESKPPQVH---TELVFSNVVPTLIDASQQ--AWLMVVGSQ 119
Query: 127 GYGAIKRAVLGSVSDYCAHHAHCTVMIV 154
G GA+ R +LGS+S HHA C V I+
Sbjct: 120 GMGALGRLLLGSISTALLHHARCPVAII 147
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 106 RNILCEAVEK------HHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
R+++C+ + A ++VVGSHG G +LGSVS AH V++V+
Sbjct: 237 RSLVCDKPARWLLEHSEQAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
>sp|P42297|YXIE_BACSU Universal stress protein YxiE OS=Bacillus subtilis (strain 168)
GN=yxiE PE=3 SV=1
Length = 148
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 9 MVVGIDDSEQSTYALQWTLDHFFANSTVNPPFKLVIVHARPSPSAVIGLAGPGAVEVLPH 68
M+V ID S+ S AL + H +L I+H AV+ + + +P
Sbjct: 5 MLVAIDGSDMSAKALDAAV-HLAKEQQA----ELSILHV--GREAVVTTSSLTGIVYVPE 57
Query: 69 -----VDSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVV 123
+ ++ KK +++E AKE + K V + A IL A EK S++VV
Sbjct: 58 HFIDEIRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKG-VSLIVV 116
Query: 124 GSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
GS G +K +LGSVS + + C V+IV+
Sbjct: 117 GSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148
>sp|O06188|Y2624_MYCTU Universal stress protein Rv2624c/MT2699 OS=Mycobacterium
tuberculosis GN=Rv2624c PE=1 SV=1
Length = 272
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 7 QTMVVGIDDSEQSTYALQWTLDHFFANSTVNPPFKLV--IVHARPSPSAVIGLAGPGAVE 64
+T++VGID S + A W +D + + P +LV I PSP
Sbjct: 10 KTIIVGIDGSHAAITAALWGVDEAISRAV---PLRLVSVIKPTHPSPD------------ 54
Query: 65 VLPHVDSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVG 124
D D + E + ++ + ++ G A +L EA A ++ VG
Sbjct: 55 ---DYDRDLAHAERSLREAQSAVEAAGKLVKIETDIPRGPAGPVLVEA--SRDAEMICVG 109
Query: 125 SHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
S G G ++LGS + A AHC V +++
Sbjct: 110 SVGIGRYASSILGSTATELAEKAHCPVAVMR 140
>sp|O06189|Y2623_MYCTU Universal stress protein Rv2623/MT2698 OS=Mycobacterium
tuberculosis GN=Rv2623 PE=1 SV=1
Length = 297
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 9 MVVGIDDSEQSTYALQWTLDHFFANSTVNPPFKLVIVHARPSPSAVIGLAGPGAVEVLPH 68
++VGIDDS + A++W A L +VHA SP L P VL
Sbjct: 10 IIVGIDDSPAAQVAVRWA-----ARDAELRKIPLTLVHAV-SPEVATWLEVPLPPGVLRW 63
Query: 69 VDSDFKKI---AARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGS 125
+ + A +VVE+A +VH E+V A L + A ++VVG
Sbjct: 64 QQDHGRHLIDDALKVVEQASLRAGPPTVHS---EIVPAAAVPTLVDM--SKDAVLMVVGC 118
Query: 126 HGYGAIKRAVLGSVSDYCAHHAHCTVMIV 154
G G +LGSVS HAHC V+I+
Sbjct: 119 LGSGRWPGRLLGSVSSGLLRHAHCPVVII 147
>sp|Q2FXL6|Y1819_STAA8 Putative universal stress protein SAOUHSC_01819 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_01819 PE=3 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q6GFZ7|Y1788_STAAR Putative universal stress protein SAR1788 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR1788 PE=3 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q5HF64|Y1759_STAAC Putative universal stress protein SACOL1759 OS=Staphylococcus
aureus (strain COL) GN=SACOL1759 PE=3 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q99TF3|Y1710_STAAM Putative universal stress protein SAV1710 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV1710 PE=1 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q2FG28|Y1656_STAA3 Putative universal stress protein SAUSA300_1656 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_1656 PE=3 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q7A0N0|Y1653_STAAW Putative universal stress protein MW1653 OS=Staphylococcus aureus
(strain MW2) GN=MW1653 PE=3 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q6G8L7|Y1637_STAAS Putative universal stress protein SAS1637 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS1637 PE=3 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q2YTD0|Y1569_STAAB Putative universal stress protein SAB1569 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB1569 PE=3 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q7A551|Y1532_STAAN Putative universal stress protein SA1532 OS=Staphylococcus aureus
(strain N315) GN=SA1532 PE=1 SV=1
Length = 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K A ++ KE+ ++ V D + G ++I+ + + +A +++ G+ G A++
Sbjct: 61 KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSESIVRHAPCDVLVVR 143
>sp|A0QZA1|Y3950_MYCS2 Universal stress protein MSMEG_3950/MSMEI_3859 OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3950
PE=1 SV=1
Length = 294
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 9 MVVGIDDSEQSTYALQWTLDHFFANSTVNPPFKLVIVHARPSPSAVIGLAGPGAVEVLPH 68
++VG+D S +S A++W S + P L+ V A P V AGP VL
Sbjct: 10 ILVGVDSSAESDAAVRWAARE---ASLHDAPITLMHVIA---PVVVSWPAGPYMATVLEC 63
Query: 69 VDSDFKKIAARVVEEAKEICSS--KSVHDFVV--EVVEGDARNILCEAVEKHHASILVVG 124
+ + A +E+A+++ + H V E+ + L +A + A ++VVG
Sbjct: 64 QEEN----ARHAIEQAQKVVADCLGETHGLTVQTEIRKESVARTLIDASKS--AQMVVVG 117
Query: 125 SHGYGAIKRAVLGSVSDYCAHHAHCTVMIV 154
+ G GA+ R +LGS S H+A V++V
Sbjct: 118 NRGMGALGRVLLGSTSTSLLHYASGPVVVV 147
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 114 EKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRPK 158
E A ++VVGSHG G +LGSVS A A VM+V RP+
Sbjct: 251 EAKQAQLVVVGSHGRGGFTGMLLGSVSSRVAQSATTPVMVV-RPR 294
>sp|O07552|NHAX_BACSU Stress response protein NhaX OS=Bacillus subtilis (strain 168)
GN=nhaX PE=2 SV=2
Length = 166
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 80 VVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSV 139
V+ EA+ + + + D ++++EGD + E + A ++V GS +K+ + GSV
Sbjct: 92 VIAEARMMLNEQQA-DGDIDILEGDPAESIIEHANRISADMIVTGSRDQNRLKKLIFGSV 150
Query: 140 SDYCAHHAHCTVMIVK 155
S+ + + V+IVK
Sbjct: 151 SEKLSAKSDIPVLIVK 166
>sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC167.05 PE=1 SV=2
Length = 601
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 8 TMVVGIDDSEQSTYALQWTLDHFFANSTVNPPFKLVIVHA----RPSPSAVIGLAGPGAV 63
T + +D S +S +A +W + N L+IV PS AV +
Sbjct: 432 TYFLTLDLSSESLHAAEWAVGILLRNGDT-----LIIVDVIECDDPSARAVKDRMESEQL 486
Query: 64 EVLPHVDSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGD-ARNILCEAVEKHHASILV 122
E L + K+ ++ V E + +EV+ + A++++ E ++ S++V
Sbjct: 487 ETLEKITKYILKLLSKTVLEV----------EVNIEVIHHEKAKHLIIEMIDYIEPSLVV 536
Query: 123 VGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRPKTKH 161
+GS G +K +LGS S+Y + + VM+ ++ K+
Sbjct: 537 MGSRGRSHLKGVLLGSFSNYLVNKSSVPVMVARKKLKKN 575
>sp|P74148|Y1388_SYNY3 Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1388 PE=3 SV=1
Length = 154
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 118 ASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
A ++V+G G + LGSVS Y HH C+V+IV+
Sbjct: 116 ADLVVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQ 153
>sp|P64922|Y2028_MYCBO Universal stress protein Mb2028c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2028c PE=3 SV=1
Length = 295
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 70 DSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYG 129
+ + ++I A V+ AKE + E+V + E + A ++V+GS G G
Sbjct: 65 EDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEI--SNEAEMVVLGSSGRG 122
Query: 130 AIKRAVLGSVSDYCAHHAHCTVMIV 154
A+ R +LGSVS A C V ++
Sbjct: 123 ALARGLLGSVSSSLVRRAGCPVAVI 147
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 118 ASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKR 156
A ++VVGSHG G + +LGSVS+ H A V++ ++
Sbjct: 256 AQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
>sp|P64921|Y2005_MYCTU Universal stress protein Rv2005c/MT2061 OS=Mycobacterium
tuberculosis GN=Rv2005c PE=1 SV=1
Length = 295
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 70 DSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYG 129
+ + ++I A V+ AKE + E+V + E + A ++V+GS G G
Sbjct: 65 EDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEI--SNEAEMVVLGSSGRG 122
Query: 130 AIKRAVLGSVSDYCAHHAHCTVMIV 154
A+ R +LGSVS A C V ++
Sbjct: 123 ALARGLLGSVSSSLVRRAGCPVAVI 147
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 118 ASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKR 156
A ++VVGSHG G + +LGSVS+ H A V++ ++
Sbjct: 256 AQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
>sp|Q8CS61|Y1385_STAES Putative universal stress protein SE_1385 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1385 PE=3 SV=1
Length = 166
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K + +++ KE+ ++ V + + G + I+ + + + A +++ G+ G A++
Sbjct: 61 KHFSEELLKGYKEVATNAGVKNVDTRLEFGSPKAIIPKKLARDVGADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q5HNJ5|Y1273_STAEQ Putative universal stress protein SERP1273 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1273 PE=3
SV=1
Length = 166
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K + +++ KE+ ++ V + + G + I+ + + + A +++ G+ G A++
Sbjct: 61 KHFSEELLKGYKEVATNAGVKNVDTRLEFGSPKAIIPKKLARDVGADLIMSGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ HA C V++V+
Sbjct: 121 RFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q57997|Y577_METJA Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0577 PE=1 SV=1
Length = 162
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 45 VHARPSPSAVIGLAGPGAVEVLPHVDSDFKKIAARVVEEAKEICSS--KSVHD--FVVE- 99
+ R S ++G+AG V+ ++ ++ EEAK + K + D F V+
Sbjct: 47 IKKRDIFSLLLGVAGLN-----KSVEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKD 101
Query: 100 -VVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRPK 158
+V G + + E I+++GSHG +K +LGSV++ ++ V++VKR
Sbjct: 102 IIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRKN 161
Query: 159 T 159
+
Sbjct: 162 S 162
>sp|O27222|Y1154_METTH Universal stress protein MTH_1154 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1154 PE=3 SV=1
Length = 146
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 102 EGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
EGD + + + E+ ++V+G+ G + + +LGSVS+ H+A CT+ +V+
Sbjct: 92 EGDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 144
>sp|Q49YE0|Y1056_STAS1 Putative universal stress protein SSP1056 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1056 PE=3 SV=1
Length = 167
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 74 KKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKH-HASILVVGSHGYGAIK 132
K + +++ KE+ ++ V + + G + I+ + + A +++ G+ G A++
Sbjct: 61 KNFSDDLLKGYKEVATNAGVKNVETRLEFGSPKAIIPKKLATDVDADLIMCGTSGLNAVE 120
Query: 133 RAVLGSVSDYCAHHAHCTVMIVK 155
R ++GSVS+ H+ C V++V+
Sbjct: 121 RFIVGSVSEAIVRHSPCDVLVVR 143
>sp|Q4L751|Y1215_STAHJ Putative universal stress protein SH1215 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH1215 PE=3 SV=1
Length = 165
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 120 ILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
+++ G+ G A++R ++GSVS+ HA C V++V+
Sbjct: 108 LIMCGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|P72817|Y1654_SYNY3 Universal stress protein Sll1654 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1654 PE=3 SV=1
Length = 157
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 72 DFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAI 131
D + A+++E A+ + S + + +E EG A +C+ ++ +A ++V+G G G
Sbjct: 75 DSPEAVAKLLEAAQAVFSQQGIATKTIER-EGMASFTICDVADEVNADLIVMGCRGLGLT 133
Query: 132 KRAVLGSVSDYCAHHAHCTVMIV 154
V SV+ + + C V++V
Sbjct: 134 TEGVAESVTARVINLSPCPVLVV 156
>sp|P45680|USPA2_COXBU Universal stress protein A homolog 2 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=uspA2 PE=1 SV=1
Length = 146
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 80 VVEEAK----EICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAV 135
++EEAK EI S ++ V G A+ ++ E + +++VGSHG I+ +
Sbjct: 64 LLEEAKKRMNEIASQLNISSDHQIVKVGPAKFLILEQAKNWGVDLIIVGSHGRHGIQ-LL 122
Query: 136 LGSVSDYCAHHAHCTVMIVK 155
LGS S+ H A C V+ V+
Sbjct: 123 LGSTSNAVLHGAKCDVLAVR 142
>sp|P0A5F8|Y2019_MYCBO Universal stress protein Mb2019 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2019 PE=3 SV=1
Length = 317
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 84 AKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYC 143
A E SS EV+ G L +++V+G G GA+ A+LGSVS
Sbjct: 90 ALEASSSGRAAQITGEVLHGQIVPTLANI--SRQVAMVVLGYRGQGAVAGALLGSVSSSL 147
Query: 144 AHHAHCTVMIV 154
HAH V ++
Sbjct: 148 VRHAHGPVAVI 158
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 118 ASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRPK 158
A ++VVGSHG G LGSVS + V++ + P+
Sbjct: 271 AQLVVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIPQ 311
>sp|P0A5F7|Y1996_MYCTU Universal stress protein Rv1996/MT2052 OS=Mycobacterium
tuberculosis GN=Rv1996 PE=1 SV=1
Length = 317
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 84 AKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYC 143
A E SS EV+ G L +++V+G G GA+ A+LGSVS
Sbjct: 90 ALEASSSGRAAQITGEVLHGQIVPTLANI--SRQVAMVVLGYRGQGAVAGALLGSVSSSL 147
Query: 144 AHHAHCTVMIV 154
HAH V ++
Sbjct: 148 VRHAHGPVAVI 158
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 118 ASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRPK 158
A ++VVGSHG G LGSVS + V++ + P+
Sbjct: 271 AQLVVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIPQ 311
>sp|Q50777|Y1538_METTM Universal stress protein MTBMA_c15380 OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=MTBMA_c15380 PE=3 SV=1
Length = 143
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 100 VVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
++EG+ + + + E+ ++++G+ G + + +LGSVS+ H+A CT+ +V+
Sbjct: 87 MLEGNPADEIVKLAEEEDVDVIIMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 141
>sp|P74897|YQA3_THEAQ Universal stress protein in QAH/OAS sulfhydrylase 3'region
OS=Thermus aquaticus PE=3 SV=1
Length = 137
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 100 VVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
+++G + +A A ++V+G+ G GA+ LGS S A C V++V+
Sbjct: 82 LLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137
>sp|Q8ZP84|USPE_SALTY Universal stress protein E OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspE PE=3 SV=3
Length = 315
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 85 KEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCA 144
K + S+ + V V +G ++ + E A I+V+G+ G + A LG+ ++
Sbjct: 230 KALRQKFSIDEKVTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVI 289
Query: 145 HHAHCTVMIVK 155
H C ++++K
Sbjct: 290 DHLRCDLLVIK 300
>sp|Q8Z788|USPE_SALTI Universal stress protein E OS=Salmonella typhi GN=uspE PE=3 SV=3
Length = 315
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 85 KEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCA 144
K + S+ + V V +G ++ + E A I+V+G+ G + A LG+ ++
Sbjct: 230 KALRQKFSIDEKVTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVI 289
Query: 145 HHAHCTVMIVK 155
H C ++++K
Sbjct: 290 DHLRCDLLVIK 300
>sp|O74782|YGBA_SCHPO Universal stress protein A family protein C25B2.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC25B2.10 PE=1 SV=1
Length = 307
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 3 TAETQTMVVGIDDSEQSTYALQWTLDHFFANSTVNPPFKLVIVHARPSPSAVIGLAGPGA 62
T ++T + G+D + S A+ W + A++ +V+ PS L+
Sbjct: 136 TRTSRTFLCGMDGNSYSEVAVDWLFETLLADNDE----AVVLRVIDPSSKLAEDLSD--- 188
Query: 63 VEVLPHVDSDFKKIAARVVEE-AKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASIL 121
+ ++ +A ++ K++ K+V +VE+V G ++++ + + L
Sbjct: 189 -------EQSYRSLAEHIMAGILKKVDDDKAV-SIIVELVVGKPQDMILRTIHVYSPDSL 240
Query: 122 VVGSHGYGAIKRAVL---GSVSDYCAHHAHCTVMIVKRPKTKH 161
+VG+ G L GSVS +C + V++V RP K
Sbjct: 241 IVGTRGKALNSFQSLLSSGSVSKFCLQKSPIPVIVV-RPDRKR 282
>sp|P0AAC3|USPE_SHIFL Universal stress protein E OS=Shigella flexneri GN=uspE PE=3 SV=2
Length = 316
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 85 KEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCA 144
K + +++ + V +G ++ + E A I+V+G+ G I A LG+ ++
Sbjct: 230 KALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVI 289
Query: 145 HHAHCTVMIVK 155
H C ++++K
Sbjct: 290 DHLRCDLLVIK 300
>sp|P0AAC0|USPE_ECOLI Universal stress protein E OS=Escherichia coli (strain K12) GN=uspE
PE=1 SV=2
Length = 316
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 85 KEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCA 144
K + +++ + V +G ++ + E A I+V+G+ G I A LG+ ++
Sbjct: 230 KALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVI 289
Query: 145 HHAHCTVMIVK 155
H C ++++K
Sbjct: 290 DHLRCDLLVIK 300
>sp|P0AAC1|USPE_ECOL6 Universal stress protein E OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspE PE=3 SV=2
Length = 316
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 85 KEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCA 144
K + +++ + V +G ++ + E A I+V+G+ G I A LG+ ++
Sbjct: 230 KALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVI 289
Query: 145 HHAHCTVMIVK 155
H C ++++K
Sbjct: 290 DHLRCDLLVIK 300
>sp|P0AAC2|USPE_ECO57 Universal stress protein E OS=Escherichia coli O157:H7 GN=uspE PE=3
SV=2
Length = 316
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 85 KEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCA 144
K + +++ + V +G ++ + E A I+V+G+ G I A LG+ ++
Sbjct: 230 KALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVI 289
Query: 145 HHAHCTVMIVK 155
H C ++++K
Sbjct: 290 DHLRCDLLVIK 300
>sp|Q97JN3|Y1240_CLOAB Maf-like protein CA_C1240 OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=CA_C1240 PE=3 SV=1
Length = 199
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 54 VIGLAGPGAVEVLPHVDSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILC--- 110
V+ A P E+L ++ DF +A+ E EI S+ + +V+ + E A++ LC
Sbjct: 4 VLASASPRRREILKNITEDFIVVASDFDESLIEI--SRDIQSYVMVLAESKAKSTLCRIE 61
Query: 111 -EAVEKHHASILVVGSHGYGAIKRAVLGSVSD 141
E K + ++G +I +LG D
Sbjct: 62 SEDFYKDEDEVFIIGCDTVVSIDGKILGKPKD 93
>sp|P60005|USPE_PHOLL Universal stress protein E OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=uspE PE=3 SV=1
Length = 314
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/71 (21%), Positives = 37/71 (52%)
Query: 85 KEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCA 144
KE+ + + + + EG +++ + ++ +A I+V+G G + A LG+ +++
Sbjct: 231 KELRQTFCIDEKYTHIHEGLPESVIPQMCDEMNAGIIVLGILGRTGLSAAFLGNTAEHVI 290
Query: 145 HHAHCTVMIVK 155
H C ++ +K
Sbjct: 291 DHLKCDILTIK 301
>sp|P0A4P8|USPF_SHIFL Universal stress protein F OS=Shigella flexneri GN=uspF PE=3 SV=1
Length = 144
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 6 TQTMVVGID--DSEQSTYALQWTLDHFFANSTVNPP--FKLVIVHARPSPSAVIGLAGPG 61
+T++V ID DSE + Q + H A + ++ L ++ + P A +GLA
Sbjct: 2 NRTILVPIDISDSELT----QRVISHVEAEAKIDDAEVHFLTVIPSLPY-YASLGLAYSA 56
Query: 62 AVEVLPHVDSDFKKIAARVVEE--AKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHAS 119
LP +D D K A +EE K + VH V V EG ++ + E +K A
Sbjct: 57 E---LPAMD-DLKAEAKSQLEEIIKKFKLPTDRVH---VHVEEGSPKDRILELAKKIPAH 109
Query: 120 ILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
++++ SH I +LGS + HA C+V++V+
Sbjct: 110 MIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P0A4P6|USPF_ECOL6 Universal stress protein F OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspF PE=3 SV=1
Length = 144
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 6 TQTMVVGID--DSEQSTYALQWTLDHFFANSTVNPP--FKLVIVHARPSPSAVIGLAGPG 61
+T++V ID DSE + Q + H A + ++ L ++ + P A +GLA
Sbjct: 2 NRTILVPIDISDSELT----QRVISHVEAEAKIDDAEVHFLTVIPSLPY-YASLGLAYSA 56
Query: 62 AVEVLPHVDSDFKKIAARVVEE--AKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHAS 119
LP +D D K A +EE K + VH V V EG ++ + E +K A
Sbjct: 57 E---LPAMD-DLKAEAKSQLEEIIKKFKLPTDRVH---VHVEEGSPKDRILELAKKIPAH 109
Query: 120 ILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
++++ SH I +LGS + HA C+V++V+
Sbjct: 110 MIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|Q0TI19|USPF_ECOL5 Universal stress protein F OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=uspF PE=3 SV=1
Length = 144
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 6 TQTMVVGID--DSEQSTYALQWTLDHFFANSTVNPP--FKLVIVHARPSPSAVIGLAGPG 61
+T++V ID DSE + Q + H A + ++ L ++ + P A +GLA
Sbjct: 2 NRTILVPIDISDSELT----QRVISHVEAEAKIDDAEVHFLTVIPSLPY-YASLGLAYSA 56
Query: 62 AVEVLPHVDSDFKKIAARVVEE--AKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHAS 119
LP +D D K A +EE K + VH V V EG ++ + E +K A
Sbjct: 57 E---LPAMD-DLKAEAKSQLEEIIKKFKLPTDRVH---VHVEEGSPKDRILELAKKIPAH 109
Query: 120 ILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
++++ SH I +LGS + HA C+V++V+
Sbjct: 110 MIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P0A4P7|USPF_ECO57 Universal stress protein F OS=Escherichia coli O157:H7 GN=uspF PE=3
SV=1
Length = 144
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 6 TQTMVVGID--DSEQSTYALQWTLDHFFANSTVNPP--FKLVIVHARPSPSAVIGLAGPG 61
+T++V ID DSE + Q + H A + ++ L ++ + P A +GLA
Sbjct: 2 NRTILVPIDISDSELT----QRVISHVEAEAKIDDAEVHFLTVIPSLPY-YASLGLAYSA 56
Query: 62 AVEVLPHVDSDFKKIAARVVEE--AKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHAS 119
LP +D D K A +EE K + VH V V EG ++ + E +K A
Sbjct: 57 E---LPAMD-DLKAEAKSQLEEIIKKFKLPTDRVH---VHVEEGSPKDRILELAKKIPAH 109
Query: 120 ILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
++++ SH I +LGS + HA C+V++V+
Sbjct: 110 MIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|Q83AC1|USPA1_COXBU Universal stress protein A homolog 1 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=uspA1 PE=3 SV=1
Length = 144
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 86 EICSSKSVHDFVVEVVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAH 145
E+C + V + G ++++ E EK + ++VVG+HG+ + + +LGS ++ H
Sbjct: 73 ELCHTVKVPSERQHTLSGVVKHMVIELAEKLNIDLIVVGTHGHHGLDK-LLGSRANAILH 131
Query: 146 HAHCTVMIV 154
A C V+ V
Sbjct: 132 VATCDVLAV 140
>sp|P67091|USPF_SALTY Universal stress protein F OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspF PE=3 SV=1
Length = 144
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 100 VVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
V EG ++ + E +K A ++++ SH I +LGS + HA C+V++V+
Sbjct: 90 VAEGSPKDKILEMAKKLPADMVIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P67092|USPF_SALTI Universal stress protein F OS=Salmonella typhi GN=uspF PE=3 SV=1
Length = 144
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 100 VVEGDARNILCEAVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK 155
V EG ++ + E +K A ++++ SH I +LGS + HA C+V++V+
Sbjct: 90 VAEGSPKDKILEMAKKLPADMVIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,115,842
Number of Sequences: 539616
Number of extensions: 2249411
Number of successful extensions: 7082
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 7015
Number of HSP's gapped (non-prelim): 94
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)