Query 031356
Match_columns 161
No_of_seqs 103 out of 115
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 20:46:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idu_A Uncharacterized protein 98.1 5.5E-05 1.9E-09 57.0 11.3 85 22-117 10-95 (127)
2 2l0d_A Cell surface protein; s 97.4 0.0016 5.6E-08 48.1 10.0 76 29-117 3-83 (114)
3 2xzz_A Protein-glutamine gamma 95.3 0.034 1.2E-06 40.1 5.5 76 39-124 13-88 (102)
4 2kut_A Uncharacterized protein 95.1 0.028 9.7E-07 42.0 4.8 72 39-117 9-91 (122)
5 3hrz_B Cobra venom factor; ser 95.0 0.17 5.7E-06 41.3 9.8 74 39-116 89-164 (252)
6 2x3c_A Toxic extracellular end 94.2 0.044 1.5E-06 47.1 4.6 58 47-105 36-110 (343)
7 3isy_A Bsupi, intracellular pr 92.1 0.57 1.9E-05 34.8 7.3 76 44-124 16-104 (120)
8 1vjj_A Protein-glutamine gluta 91.9 0.49 1.7E-05 44.5 8.2 86 31-125 583-678 (692)
9 2qsv_A Uncharacterized protein 90.8 0.64 2.2E-05 36.7 6.8 80 26-117 115-201 (220)
10 2e6j_A Hydin protein; PAPD, st 90.8 0.35 1.2E-05 33.5 4.7 82 27-115 6-89 (112)
11 2ys4_A Hydrocephalus-inducing 90.3 0.91 3.1E-05 32.4 6.7 83 27-121 22-104 (122)
12 1yew_A Particulate methane mon 90.0 0.72 2.5E-05 40.5 6.9 73 30-105 248-335 (382)
13 1ex0_A Coagulation factor XIII 89.8 2 6.7E-05 40.7 10.2 88 28-125 616-713 (731)
14 3rfr_A PMOB; membrane, oxidore 88.9 1.2 4.3E-05 39.4 7.6 73 31-106 283-368 (419)
15 1g0d_A Protein-glutamine gamma 87.1 2 6.8E-05 40.4 8.2 87 29-125 572-669 (695)
16 2q3z_A Transglutaminase 2; tra 87.0 1 3.4E-05 42.3 6.2 88 29-125 574-672 (687)
17 4fxk_B Complement C4-A alpha c 85.9 1.6 5.6E-05 40.1 7.0 73 39-116 161-234 (767)
18 3c75_A Amicyanin; copper prote 84.7 1.7 5.9E-05 31.7 5.4 46 55-114 72-117 (132)
19 4acq_A Alpha-2-macroglobulin; 84.5 3.3 0.00011 41.5 8.8 77 39-119 776-852 (1451)
20 1iuz_A Plastocyanin; electron 83.7 2.4 8.2E-05 28.7 5.5 52 55-114 30-81 (98)
21 3prx_B Cobra venom factor; imm 82.8 4.9 0.00017 40.9 9.3 74 39-116 821-896 (1642)
22 2hr0_B Complement C3 alpha' ch 81.7 6.8 0.00023 37.0 9.4 85 30-118 74-166 (915)
23 2b39_A C3; thioester, immune d 79.9 13 0.00045 37.4 11.2 77 39-119 835-914 (1661)
24 4hci_A Cupredoxin 1; structura 79.0 3.4 0.00012 28.1 4.9 47 50-114 37-83 (100)
25 3cfu_A Uncharacterized lipopro 78.0 12 0.00042 28.3 8.2 61 43-105 43-111 (159)
26 2iaa_C Azurin; quinoprotein, t 77.9 2.6 8.8E-05 31.0 4.2 64 50-114 27-109 (128)
27 1id2_A Amicyanin; beta barrel, 75.7 5.9 0.0002 27.4 5.4 46 55-114 46-91 (106)
28 2cal_A Rusticyanin; iron respi 75.2 8 0.00028 28.9 6.4 62 50-114 70-135 (154)
29 3es6_B Prolactin-inducible pro 73.4 22 0.00074 25.9 8.2 70 42-120 18-88 (118)
30 2x41_A Beta-glucosidase; hydro 71.2 7.6 0.00026 36.1 6.4 82 47-136 615-703 (721)
31 3qbt_B Inositol polyphosphate 70.9 13 0.00044 27.4 6.5 71 28-105 24-99 (140)
32 2aan_A Auracyanin A; cupredoxi 69.6 10 0.00035 27.2 5.7 63 49-114 43-121 (139)
33 3ugu_A S-arrestin; arrestin fo 68.8 19 0.00065 31.5 8.1 69 36-109 218-295 (380)
34 2pn5_A TEP1R, thioester-contai 68.5 31 0.001 33.7 10.3 73 39-115 673-750 (1325)
35 2ccw_A Azurin II, AZN-2; elect 67.9 4 0.00014 29.9 3.1 54 50-104 28-99 (129)
36 1nwp_A Azurin; electron transp 66.7 4.7 0.00016 29.5 3.3 54 50-104 28-99 (128)
37 2plt_A Plastocyanin; electron 66.7 8.7 0.0003 25.5 4.5 60 42-114 22-81 (98)
38 3ay2_A Lipid modified azurin p 63.3 5.1 0.00017 30.9 3.1 63 51-114 69-148 (167)
39 3ef4_A Pseudoazurin, blue copp 61.6 11 0.00038 27.5 4.5 45 54-114 33-77 (124)
40 3zyz_A Beta-D-glucoside glucoh 61.4 28 0.00096 32.4 8.2 85 47-136 613-702 (713)
41 3erx_A Pseudoazurin; copper pr 61.3 16 0.00055 26.4 5.3 36 63-114 39-76 (123)
42 1iby_A Nitrosocyanin; RED copp 61.0 30 0.001 23.5 6.5 48 50-115 47-94 (112)
43 3tu6_A Pseudoazurin (blue copp 58.4 13 0.00044 27.1 4.4 42 55-114 35-78 (127)
44 1b3i_A PETE protein, protein ( 57.7 9.1 0.00031 25.4 3.2 51 54-114 30-80 (97)
45 1pcs_A Plastocyanin; electron 56.2 15 0.00051 24.3 4.1 51 55-114 31-81 (98)
46 3a0j_A Cold shock protein; OB- 55.1 19 0.00064 23.8 4.4 45 25-71 20-70 (73)
47 2ov0_A Amicyanin; beta-sandwic 54.0 27 0.00091 23.7 5.3 46 55-114 45-90 (105)
48 2ux6_A Pseudoazurin; type-1 co 51.7 32 0.0011 24.6 5.5 43 54-114 32-76 (122)
49 1plc_A Plastocyanin; electron 49.9 25 0.00086 23.3 4.5 54 54-114 28-82 (99)
50 3osv_A Flagellar basal-BODY RO 46.8 79 0.0027 22.8 7.9 54 50-112 38-95 (138)
51 1xf1_A C5A peptidase, SCP; hyd 46.8 40 0.0014 32.0 6.8 61 47-107 499-565 (926)
52 1cuo_A Protein (azurin ISO-2); 46.1 24 0.00083 25.6 4.2 64 50-114 28-110 (129)
53 1byp_A Protein (plastocyanin); 45.6 14 0.00048 24.5 2.6 62 42-114 21-82 (99)
54 2gim_A Plastocyanin; beta shee 45.2 17 0.00057 24.4 3.0 60 42-114 24-88 (106)
55 1pmy_A Pseudoazurin; electron 45.2 31 0.0011 24.7 4.6 44 53-114 31-76 (123)
56 3fsa_A Azurin; copper, cupredo 44.7 18 0.0006 26.8 3.2 64 50-114 28-110 (125)
57 2qsv_A Uncharacterized protein 42.8 94 0.0032 23.9 7.4 68 37-114 10-80 (220)
58 1paz_A Pseudoazurin precursor; 42.4 42 0.0014 24.0 4.9 43 54-114 32-76 (123)
59 1bw3_A Barwin, basic barley SE 42.1 32 0.0011 25.5 4.3 50 39-93 58-122 (125)
60 4a02_A EFCBM33A, CBM33, chitin 42.0 1.2E+02 0.004 23.3 7.7 64 48-114 75-144 (166)
61 1w8o_A Bacterial sialidase; 3D 41.1 1.1E+02 0.0038 26.5 8.3 67 41-115 368-437 (601)
62 3q48_A Chaperone CUPB2; IG fol 40.1 74 0.0025 25.7 6.6 17 47-63 42-58 (257)
63 1suj_A CONE arrestin; sensory 39.7 78 0.0027 27.5 7.0 77 31-109 194-276 (392)
64 1g4m_A Beta-arrestin1; sensory 38.5 1.1E+02 0.0037 26.3 7.7 77 27-109 194-279 (393)
65 3cu7_A Complement C5; Mg domai 37.5 40 0.0014 33.9 5.4 83 30-116 816-912 (1676)
66 2q2e_B Type 2 DNA topoisomeras 36.8 29 0.00098 31.9 4.0 56 47-104 524-588 (621)
67 1g6p_A Cold shock protein TMCS 35.8 17 0.00059 23.4 1.7 43 26-70 20-66 (66)
68 1c9o_A CSPB, cold-shock protei 35.7 41 0.0014 21.5 3.6 41 26-68 21-65 (66)
69 2ytx_A Cold shock domain-conta 35.2 52 0.0018 22.8 4.3 54 28-85 39-95 (97)
70 3rgh_A Filamin-A; cell adhesio 35.1 1E+02 0.0035 20.8 6.0 66 41-123 20-85 (100)
71 3abz_A Beta-glucosidase I; gly 35.1 83 0.0028 29.9 6.9 84 47-136 735-826 (845)
72 1wfq_A UNR protein; beta-barre 33.1 42 0.0014 23.0 3.5 43 28-71 39-85 (89)
73 3cam_A Cold-shock domain famil 32.8 63 0.0022 20.8 4.2 39 28-68 24-66 (67)
74 3vta_A Cucumisin; subtilisin-l 32.8 2.3E+02 0.008 25.3 9.3 70 47-124 537-607 (621)
75 2k5n_A Putative cold-shock pro 32.3 70 0.0024 21.1 4.4 45 26-72 22-68 (74)
76 1bxv_A Plastocyanin; copper pr 32.1 98 0.0034 19.6 5.8 20 91-114 55-74 (91)
77 2kcm_A Cold shock domain famil 32.0 17 0.00058 24.3 1.3 46 25-72 19-69 (74)
78 1z9l_A Vesicle-associated memb 31.5 99 0.0034 21.8 5.5 52 47-107 27-79 (128)
79 2d7p_A Filamin-C; beta-sandwic 30.3 1.2E+02 0.004 21.2 5.6 82 23-124 6-88 (112)
80 3cu7_A Complement C5; Mg domai 28.8 89 0.003 31.5 6.3 76 47-122 1398-1497(1676)
81 3cvb_A Plastocyanin; cupredoxi 28.6 72 0.0025 20.9 4.1 61 42-114 23-87 (105)
82 3qis_A Inositol polyphosphate 28.5 2.6E+02 0.0088 23.3 8.6 75 27-108 26-105 (366)
83 3uam_A Chitin binding domain; 27.8 1.2E+02 0.0042 24.3 5.9 71 42-114 108-194 (216)
84 3pdd_A Glycoside hydrolase, fa 27.3 2E+02 0.0068 21.7 7.2 62 44-114 15-78 (190)
85 3i2z_B RNA chaperone, negative 27.2 97 0.0033 20.0 4.4 39 28-68 28-70 (71)
86 2d7m_A Filamin-C; beta-sandwic 26.7 1.3E+02 0.0045 20.7 5.3 63 44-123 28-90 (115)
87 1wic_A Hypothetical protein ri 26.5 1.5E+02 0.0053 21.8 5.9 55 44-107 32-87 (152)
88 2yty_A Cold shock domain-conta 25.9 35 0.0012 23.4 2.0 45 28-73 39-86 (88)
89 2hr0_B Complement C3 alpha' ch 25.2 1.2E+02 0.0041 28.5 6.2 70 43-114 631-725 (915)
90 2b39_A C3; thioester, immune d 24.5 4.7E+02 0.016 26.3 10.5 81 44-126 1379-1485(1661)
91 3gld_A Pilin; all-beta, cell a 24.5 2.5E+02 0.0087 23.4 7.4 65 30-98 161-241 (295)
92 2cri_A Vesicle-associated memb 23.5 1.3E+02 0.0044 21.9 5.0 52 47-107 31-83 (147)
93 2dia_A Filamin-B; beta-sandwic 23.1 1.8E+02 0.0063 19.8 6.3 77 29-123 12-88 (113)
94 3ije_A Integrin alpha-V; integ 21.8 1.3E+02 0.0046 28.7 5.8 44 31-76 606-650 (967)
95 3e0e_A Replication protein A; 21.7 1.9E+02 0.0065 19.4 5.5 50 40-100 6-72 (97)
96 3jts_B Beta-2-microglobulin; a 21.7 1.1E+02 0.0037 21.4 4.1 47 7-58 3-50 (119)
97 1rlw_A Phospholipase A2, CALB 21.5 1.6E+02 0.0053 19.6 4.8 61 51-115 60-120 (126)
98 4f98_A Hypothetical protein; P 21.2 80 0.0027 21.1 3.0 33 100-133 27-59 (69)
99 4dh2_A Cellulosome anchoring p 20.6 2.4E+02 0.0082 21.8 6.1 48 31-82 15-64 (170)
100 2ytv_A Cold shock domain-conta 20.3 55 0.0019 21.9 2.1 42 29-71 31-75 (79)
101 2dmh_A Myoferlin; beta-sandwic 20.2 2.1E+02 0.0072 19.4 5.9 50 51-103 57-109 (140)
102 4b7l_A Filamin-B; structural p 20.2 2.4E+02 0.0084 23.5 6.6 68 40-123 267-335 (347)
No 1
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=98.07 E-value=5.5e-05 Score=57.00 Aligned_cols=85 Identities=12% Similarity=0.115 Sum_probs=63.4
Q ss_pred cccCCCCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCcee-eEEEeecCCCceEE
Q 031356 22 SFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS-QSWERLDAGGILSH 100 (161)
Q Consensus 22 ~~~~~~~a~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s-~~~~ri~pg~nvsH 100 (161)
.++....|.|.++.. ....+..| +.++++.+|.|.|+.+|.+.++.- .+.|..- ...-.|+||++.+-
T Consensus 10 ~~~~~~~pDL~V~is-~P~~v~~G-~~~ti~vtV~N~G~~~a~~~~V~l---------yvng~~v~t~~v~La~G~s~tv 78 (127)
T 3idu_A 10 LATTFEFPDLTVEIK-GPDVVGVN-KLAEYEVHVKNLGGIGVPSTKVRV---------YINGTLYKNWTVSLGPKEEKVL 78 (127)
T ss_dssp C--CCSSCCEEEEEE-SCSEECTT-CCEEEEEEEEECSSSCEEEEEEEE---------EETTEEEEEEEEEECTTCEEEE
T ss_pred EeeeccCCCeEEEec-CCCcccCC-CEEEEEEEEEECCCCccCCcEEEE---------EECCEEEeeEEeccCCCCeEEE
Confidence 355677899999554 57788889 999999999999998766655543 2344431 11225999999999
Q ss_pred EEEEEEceeeeEEeecE
Q 031356 101 SFELDAKVKGMFHGSPA 117 (161)
Q Consensus 101 ~vvv~p~~~G~f~~t~A 117 (161)
.|...|...|.|++.+-
T Consensus 79 ~f~~~~~~~G~~~v~Av 95 (127)
T 3idu_A 79 TFNWTPTQEGMYRINAT 95 (127)
T ss_dssp EEEECCSSCEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEE
Confidence 99999999999988654
No 2
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=97.39 E-value=0.0016 Score=48.15 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=58.2
Q ss_pred ceEEEEeeecccccccCceeEEEEEEEEecCCcc--eeeEEEecCCCCCCCceEecCce--eeEEEeecCCCceEEEEEE
Q 031356 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTST--AYDVSLTDDSWPQDKFDVISGNI--SQSWERLDAGGILSHSFEL 104 (161)
Q Consensus 29 a~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~--A~dV~l~D~sfp~~~F~iv~G~~--s~~~~ri~pg~nvsH~vvv 104 (161)
|.|.+.- +....+++| +.++|+.+|.|+|..+ +..|.|.. .|.. ......|++|++.+-.|..
T Consensus 3 PDL~vt~-itP~~~~~~-~~~ti~atVkN~G~~~a~~~~V~ly~-----------~g~~v~t~~v~~LaaG~s~tv~~~w 69 (114)
T 2l0d_A 3 PDLVPVS-LTPVTVVPN-TVNTMTATIENQGNKDSTSFNVSLLV-----------DGIVVDTQTVTSLESENSTNVDFHW 69 (114)
T ss_dssp CCEEEEE-EECSEECTT-SEEEEEEEEEECSSSCBCCEEEEEEE-----------TTEEEEEEEESCBCBTCEEEEEEEE
T ss_pred CCcEEEe-ccCCCcCCC-CeEEEEEEEEECCCCCCCCEEEEEEE-----------CCEEEcceecccccCCCEEEEEEEE
Confidence 6676665 345668899 9999999999999874 45566554 3544 3456679999999999999
Q ss_pred EEc-eeeeEEeecE
Q 031356 105 DAK-VKGMFHGSPA 117 (161)
Q Consensus 105 ~p~-~~G~f~~t~A 117 (161)
.|+ ..|.|.++..
T Consensus 70 ~~~~~~G~ytl~a~ 83 (114)
T 2l0d_A 70 TLDGTANSYTLTVN 83 (114)
T ss_dssp ECCCSCSEEEEEEE
T ss_pred eecCcCceEEEEEE
Confidence 998 5899998764
No 3
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=95.26 E-value=0.034 Score=40.10 Aligned_cols=76 Identities=12% Similarity=0.035 Sum_probs=60.2
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEeecEE
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~ 118 (161)
...+++| +++++++++.|-=..+-.|..++=++- .+..+ .......|+||+.+++.+.++|++.|.-.+ .
T Consensus 13 ~g~~~v~-~~l~v~vsf~NPL~~~L~~c~~~vEG~-----GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L---~ 82 (102)
T 2xzz_A 13 LGAAVVG-QECEVQIVFKNPLPVTLTNVVFRLEGS-----GLQRP-KILNVGDIGGNETVTLRQSFVPVRPGPRQL---I 82 (102)
T ss_dssp SSCCCSS-SCEEEEEEEECCSSSCBCSEEEEEEET-----TTEEE-EEEEECCBCTTCEEEEEEEECCCSCSSCCC---E
T ss_pred CCCcccC-CeEEEEEEEECCCCCcccCEEEEEECC-----CCCcc-eEEEcCcCCCCCEEEEEEEEecCcccceEE---E
Confidence 5778899 999999999999988888888773210 15555 677888999999999999999999998655 4
Q ss_pred EEEEcC
Q 031356 119 ITFRIP 124 (161)
Q Consensus 119 VtY~~~ 124 (161)
+++...
T Consensus 83 a~f~s~ 88 (102)
T 2xzz_A 83 ASLDSP 88 (102)
T ss_dssp EEEECG
T ss_pred EEEECC
Confidence 444443
No 4
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=95.06 E-value=0.028 Score=42.03 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=51.0
Q ss_pred ccccccCceeEEEEEEEEecCCc--ceeeEEEecCCCCCCCceEecCce--eeEEEeecCCCceEEEEEEE--Ecee---
Q 031356 39 LKRLKSGAERISVSIDIHNQGTS--TAYDVSLTDDSWPQDKFDVISGNI--SQSWERLDAGGILSHSFELD--AKVK--- 109 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s--~A~dV~l~D~sfp~~~F~iv~G~~--s~~~~ri~pg~nvsH~vvv~--p~~~--- 109 (161)
...+.+| +.++|+.+|-|+|.. +|..|.+.-++ |.. +|.+ +.....|+||++.+-.+.+. ++..
T Consensus 9 P~~p~~g-~~vTvsatVkN~Gt~~s~a~~V~~yl~~-p~~-----gg~~vgt~tv~~LaaG~s~t~~v~~~~~~~~~~~a 81 (122)
T 2kut_A 9 KETPFEG-EEITVSARVTNRGAAEAHNVPVAVYLGN-PAQ-----GGVEIGRDTISRIPVGGTGLARVQWKATRKLAGRA 81 (122)
T ss_dssp TTSCCTT-CEEEEEEEEECCSSSCBCCCCEEECSSC-TTT-----CCCCCBCCCCSCBCTTCEEECCEEEECCCCCSSCC
T ss_pred CCCCCCC-CeEEEEEEEEeCCCcccCcEEEEEEeCC-Ccc-----CCeEEeeEEccccCCCCeEEEEEEEecCCcccccc
Confidence 4567888 999999999999988 67778887765 321 2232 33457899999999555554 4443
Q ss_pred --eeEEeecE
Q 031356 110 --GMFHGSPA 117 (161)
Q Consensus 110 --G~f~~t~A 117 (161)
|.|.+.+.
T Consensus 82 ~~Gsy~v~Av 91 (122)
T 2kut_A 82 ANPGVPVYAV 91 (122)
T ss_dssp SCCCCCCCEE
T ss_pred cCceEEEEEE
Confidence 88887653
No 5
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=95.04 E-value=0.17 Score=41.26 Aligned_cols=74 Identities=12% Similarity=-0.004 Sum_probs=53.5
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecC--ceeeEEEeecCCCceEEEEEEEEceeeeEEeec
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG--NISQSWERLDAGGILSHSFELDAKVKGMFHGSP 116 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G--~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~ 116 (161)
...++.| +.+.+..++||..+.. .+|++.=. ..+.|..... ....+.-.|++|+..+..+.++|++.|..+++-
T Consensus 89 P~sv~rG-E~~~l~~~V~Ny~~~~-~~v~V~l~--~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v 164 (252)
T 3hrz_B 89 PYSVVKN-EQVEIRAILHNYVNED-IYVRVELL--YNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEI 164 (252)
T ss_dssp CSCEETT-CCEEEEEEEEECSSSC-EEEEEEEC--CCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSEEEEEEE
T ss_pred CcEEeeC-CEEEEEEEEEcccCce-EEEEEEEE--cCCceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCCcEEEEE
Confidence 3455677 9999999999998865 45554421 2345766542 223445689999999999999999999887754
No 6
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=94.21 E-value=0.044 Score=47.14 Aligned_cols=58 Identities=21% Similarity=0.255 Sum_probs=43.4
Q ss_pred eeEEEEEEEEecCCcceeeEE--EecCCCCCCCceEecCce---------------eeEEEeecCCCceEEEEEEE
Q 031356 47 ERISVSIDIHNQGTSTAYDVS--LTDDSWPQDKFDVISGNI---------------SQSWERLDAGGILSHSFELD 105 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s~A~dV~--l~D~sfp~~~F~iv~G~~---------------s~~~~ri~pg~nvsH~vvv~ 105 (161)
.++.|+.+|.|.|+.+..=++ +- |++|.+.|+|-.+-. ...+-.|+||+++++.+-+-
T Consensus 36 ~~~~vk~tvtN~g~~~~~lLk~~~l-D~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRLLKWQLP-GSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVS 110 (343)
T ss_dssp SCCEEEEEEEECSSSCEEEEGGGSC-SSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECT
T ss_pred CCeEEEEEEEeCCCCceEeeccCCC-CcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehh
Confidence 589999999999998742211 22 468888999865421 23588999999999999984
No 7
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=92.13 E-value=0.57 Score=34.80 Aligned_cols=76 Identities=14% Similarity=0.264 Sum_probs=49.6
Q ss_pred cCceeEEEEEEEEecCCcce---------eeEEEecCCCCCCCceEecCce---eeEEEeecCCCceEEEEEEE-Eceee
Q 031356 44 SGAERISVSIDIHNQGTSTA---------YDVSLTDDSWPQDKFDVISGNI---SQSWERLDAGGILSHSFELD-AKVKG 110 (161)
Q Consensus 44 ~g~~~vtV~y~IyNvG~s~A---------~dV~l~D~sfp~~~F~iv~G~~---s~~~~ri~pg~nvsH~vvv~-p~~~G 110 (161)
.| ..+.++++|-|.|+.+- +|+.|.|.. ....|....|.. -..-..|+||+..+...+.- +...|
T Consensus 16 ~g-~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~-G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG 93 (120)
T 3isy_A 16 EP-EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSE-HKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG 93 (120)
T ss_dssp CS-SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTT-CCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE
T ss_pred CC-CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCC-CCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc
Confidence 56 79999999999998543 344454410 122222222322 23447899999999999998 56789
Q ss_pred eEEeecEEEEEEcC
Q 031356 111 MFHGSPALITFRIP 124 (161)
Q Consensus 111 ~f~~t~A~VtY~~~ 124 (161)
.|.. ++.++..
T Consensus 94 ~Ytl---~a~l~~~ 104 (120)
T 3isy_A 94 TYEV---KVTFKGR 104 (120)
T ss_dssp EEEE---EEEECCE
T ss_pred cEEE---EEEEEee
Confidence 8887 4555543
No 8
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=91.90 E-value=0.49 Score=44.47 Aligned_cols=86 Identities=15% Similarity=0.168 Sum_probs=68.7
Q ss_pred EEEEeeecccc----------cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEE
Q 031356 31 IVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSH 100 (161)
Q Consensus 31 LlvsK~i~~~~----------~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH 100 (161)
+++.|.|.... +++| +++++++++.|-=..+-.|..|+=++ =.+..|..+.....|+||+.+++
T Consensus 583 ~~~~~di~l~~P~l~I~v~g~~~v~-~~l~v~v~f~NPL~~~L~~c~~~vEG-----~GL~~~~~~~~~~~v~pg~~~~~ 656 (692)
T 1vjj_A 583 VVVERDIILDNPTLTLEVLNEARVR-KPVNVQMLFSNPLDEPVRDCVLMVEG-----SGLLLGNLKIDVPTLGPKERSRV 656 (692)
T ss_dssp EEEEEEEECBCCCEEEEECSCCBTT-SCEEEEEEEECCSSSCBCSEEEEEEC-----TTTSSSCEEEEECCBCTTCEEEE
T ss_pred EEEEEEEEEcCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCCCceEEEcCccCCCCEEEE
Confidence 88888775554 5788 99999999999999888888876321 11556677888899999999999
Q ss_pred EEEEEEceeeeEEeecEEEEEEcCC
Q 031356 101 SFELDAKVKGMFHGSPALITFRIPT 125 (161)
Q Consensus 101 ~vvv~p~~~G~f~~t~A~VtY~~~~ 125 (161)
.+.++|++.|.-.+ ++++...+
T Consensus 657 ~~~~~P~~~G~r~L---~a~f~s~~ 678 (692)
T 1vjj_A 657 RFDILPSRSGTKQL---LADFSCNK 678 (692)
T ss_dssp EEEECCCSCEEEEE---EEEEECSS
T ss_pred EEEEEeccccceEE---EEEEECCc
Confidence 99999999999877 55665544
No 9
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=90.83 E-value=0.64 Score=36.66 Aligned_cols=80 Identities=15% Similarity=0.213 Sum_probs=53.6
Q ss_pred CCCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEE--EeecCCCceEEEEE
Q 031356 26 SDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW--ERLDAGGILSHSFE 103 (161)
Q Consensus 26 ~~~a~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~--~ri~pg~nvsH~vv 103 (161)
+..|.+-++..+.--.+. | +..+.+++|.|.|+++- .|.|- .---|-+...| +.|+||++..-.+.
T Consensus 115 ~~~~~i~~~~~~dfG~i~-g-~~~~~~f~i~N~G~~pL---~I~~v-------~~scgct~~~~~~~~i~PGe~~~i~v~ 182 (220)
T 2qsv_A 115 AQTGVMELSTYLDMGQLD-G-ETTKAAIEIRNVGAGPL---RLHSV-------TTRNPALTAVPDRTEIKPGGSTLLRIA 182 (220)
T ss_dssp GGCCCEECCCEEEEEECT-T-SCEEEEEEEEECSSSCE---EEEEE-------EECSTTEEEEESCSEECTTCEEEEEEE
T ss_pred ccCCEEEEEeEEeeeccC-C-CeEEEEEEEEECCCCCE---EEEEE-------EeCCCCEeeecCCccCCCCCEEEEEEE
Confidence 355667776333333333 6 89999999999999853 44441 12234454444 57999999998888
Q ss_pred EEEcee-ee----EEeecE
Q 031356 104 LDAKVK-GM----FHGSPA 117 (161)
Q Consensus 104 v~p~~~-G~----f~~t~A 117 (161)
..|+.. |. |+-+-.
T Consensus 183 ~~~~~~~g~~~~~~~~~i~ 201 (220)
T 2qsv_A 183 VDPQVMKAEGWQSIAADIS 201 (220)
T ss_dssp ECHHHHHHTTCSEEEEEEE
T ss_pred EecCCCCCcccceeccEEE
Confidence 889888 88 766433
No 10
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.76 E-value=0.35 Score=33.54 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=55.3
Q ss_pred CCceEEEEeee-cccccccCceeEEEEEEEEecCCcceeeEEEecCCCC-CCCceEecCceeeEEEeecCCCceEEEEEE
Q 031356 27 DVPFIVAHKKA-SLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWP-QDKFDVISGNISQSWERLDAGGILSHSFEL 104 (161)
Q Consensus 27 ~~a~LlvsK~i-~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp-~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv 104 (161)
-+|.+-.++.. .--....| ...+-+++|.|.|+.++ ..++..+.=+ ...|.+ +-.-..|+||+...-.+..
T Consensus 6 ~~P~i~~~~~~ldFG~v~~g-~~~~~~~~l~N~g~~p~-~~~~~~~~~~~~~~f~v-----~p~~g~i~pg~~~~i~V~f 78 (112)
T 2e6j_A 6 SGPKIHFNFELLDIGKVFTG-SAHCYEAILYNKGSIDA-LFNMTPPTSALGACFVF-----SPKEGIIEPSGVQAIQISF 78 (112)
T ss_dssp CCCSEEESCSEEEEEEEESS-CCEEEEEEEEECCSSCE-EEEECCCSSHHHHHCEE-----ESSEEEECTTBCCEEEEEE
T ss_pred CCCEEEECcccEecEeEEEC-CEEEEEEEEEECCcceE-EEEEecCCccccCcEEE-----ECCcCEECCCCEEEEEEEE
Confidence 34666665543 33345557 88999999999999876 4444332100 012433 2344689999999999999
Q ss_pred EEceeeeEEee
Q 031356 105 DAKVKGMFHGS 115 (161)
Q Consensus 105 ~p~~~G~f~~t 115 (161)
.|+..|.|+-+
T Consensus 79 ~~~~~g~f~~~ 89 (112)
T 2e6j_A 79 SSIILGNFEEE 89 (112)
T ss_dssp CCCCCEEEEEE
T ss_pred ECCCcceEEEE
Confidence 99999999864
No 11
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.29 E-value=0.91 Score=32.42 Aligned_cols=83 Identities=12% Similarity=0.188 Sum_probs=63.5
Q ss_pred CCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEE
Q 031356 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDA 106 (161)
Q Consensus 27 ~~a~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p 106 (161)
..|.|-+.+.+.-....+| ..-+-++.|-|.|+.++. .++.. +..|.+.- .-..|+||+..+-.+.-.|
T Consensus 22 ~~~~l~~p~~l~fg~~~v~-~~~~~~~~l~N~g~~~~~-f~~~~----~~~F~i~P-----~~g~L~pg~~~~i~V~F~P 90 (122)
T 2ys4_A 22 ARAILDFPDKLNFSTCPVK-YSTQKILLVRNIGNKNAV-FHIKT----CRPFSIEP-----AIGTLNVGESMQLEVEFEP 90 (122)
T ss_dssp CCCCCCCCSEECCCSEESS-SCEEEEEEEECCSSSCEE-EEEEC----CTTEEEES-----SEEEECTTCEEEEEEEECC
T ss_pred CCcEECCCCeeecCCeecC-CeEEEEEEEEECCCCCEE-EEEec----CCCeEEEC-----CcCEECCCCEEEEEEEEEc
Confidence 3345555567777888889 899999999999998773 45443 24687632 2279999999999999999
Q ss_pred ceeeeEEeecEEEEE
Q 031356 107 KVKGMFHGSPALITF 121 (161)
Q Consensus 107 ~~~G~f~~t~A~VtY 121 (161)
+..|.|+..- .+.|
T Consensus 91 ~~~g~~~~~l-~v~~ 104 (122)
T 2ys4_A 91 QSVGDHSGRL-IVCY 104 (122)
T ss_dssp SSSBCCCCBC-EEEE
T ss_pred CCCccEEEEE-EEEE
Confidence 9999998765 5566
No 12
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=89.96 E-value=0.72 Score=40.50 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=52.7
Q ss_pred eEEEEeeecccccccCceeEEEEEEEEecCCccee-------eEEEec-------CCCCCCCceEecCceeeEEEe-ecC
Q 031356 30 FIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY-------DVSLTD-------DSWPQDKFDVISGNISQSWER-LDA 94 (161)
Q Consensus 30 ~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~-------dV~l~D-------~sfp~~~F~iv~G~~s~~~~r-i~p 94 (161)
..+.-|-..-+|-+.| +.++++++|.|.|+++.+ +|.+.+ ..+|.+ . +-.+-++++=+. |+|
T Consensus 248 ~~V~~~v~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~-l-la~~gL~vsd~~pI~P 324 (382)
T 1yew_A 248 PTVSVKVEDATYRVPG-RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPED-L-LAEDGLSVSDNSPLAP 324 (382)
T ss_dssp CSEEEEEEEEEEESSC-SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGG-G-EETTCEEESCCSCBCT
T ss_pred CceEEEeeccEEecCC-cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHH-h-hccCCceeCCCCCcCC
Confidence 3566676778899999 999999999999999865 566644 234433 1 233345655555 999
Q ss_pred CCceEEEEEEE
Q 031356 95 GGILSHSFELD 105 (161)
Q Consensus 95 g~nvsH~vvv~ 105 (161)
|++.+-++.+.
T Consensus 325 GETr~~~v~a~ 335 (382)
T 1yew_A 325 GETRTVDVTAS 335 (382)
T ss_dssp TCEEEEEEEEE
T ss_pred CceeEEEEEee
Confidence 99999988877
No 13
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=89.84 E-value=2 Score=40.69 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=69.1
Q ss_pred CceEEEEeeecccc----------cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCc
Q 031356 28 VPFIVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGI 97 (161)
Q Consensus 28 ~a~LlvsK~i~~~~----------~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~n 97 (161)
.-.+++.|.|.... +++| +++++++++.|-=..+-.|..|+=++ =.+..+ ...+...|+||+.
T Consensus 616 ~~~~~~~~di~l~~P~l~I~v~g~~~v~-~~l~v~vsf~NPL~~~L~~c~~~vEG-----~GL~~~-~~~~~~~v~pg~~ 688 (731)
T 1ex0_A 616 RDVLAKQKSTVLTIPEIIIKVRGTQVVG-SDMTVTVQFTNPLKETLRNVWVHLDG-----PGVTRP-MKKMFREIRPNST 688 (731)
T ss_dssp CCEEEEEEEEECBCCCCEEEEEECCBTT-SCEEEEEEEECCSSSCEEEEEEEEEE-----TTTEEE-EEEEEEEECTTCE
T ss_pred CeEEEEEEEEEEeCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCce-eeEecCccCCCCE
Confidence 33578888775544 5788 99999999999999888888876311 115566 6788899999999
Q ss_pred eEEEEEEEEceeeeEEeecEEEEEEcCC
Q 031356 98 LSHSFELDAKVKGMFHGSPALITFRIPT 125 (161)
Q Consensus 98 vsH~vvv~p~~~G~f~~t~A~VtY~~~~ 125 (161)
+++.+.++|++.|.-++ ++++...+
T Consensus 689 ~~~~~~~~P~~~G~r~L---~a~f~s~~ 713 (731)
T 1ex0_A 689 VQWEEVCRPWVSGHRKL---IASMSSDS 713 (731)
T ss_dssp EEEEEEECCSSCEEEEE---EEEEECSS
T ss_pred EEEEEEEEeccccceEE---EEEEECCc
Confidence 99999999999999887 56666554
No 14
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=88.88 E-value=1.2 Score=39.40 Aligned_cols=73 Identities=8% Similarity=0.087 Sum_probs=53.1
Q ss_pred EEEEeeecccccccCceeEEEEEEEEecCCccee-------eEEEecCCC------CCCCceEecCceeeEEEeecCCCc
Q 031356 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY-------DVSLTDDSW------PQDKFDVISGNISQSWERLDAGGI 97 (161)
Q Consensus 31 LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~-------dV~l~D~sf------p~~~F~iv~G~~s~~~~ri~pg~n 97 (161)
-+.-|-..-+|-+.| +.++++++|.|.|+++.+ +|.+.|.+. .+++...-.|..+-. -|+||++
T Consensus 283 ~V~~~v~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~--pI~PGET 359 (419)
T 3rfr_A 283 QVTTELNGGVYKVPG-RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD--VIAPGES 359 (419)
T ss_dssp CCEEEEEEEEEESSS-SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC--CBCTTCE
T ss_pred ceEEEEeceEEecCC-cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC--CcCCCcc
Confidence 355565667888999 999999999999999764 677776433 334454445644333 8999999
Q ss_pred eEEEEEEEE
Q 031356 98 LSHSFELDA 106 (161)
Q Consensus 98 vsH~vvv~p 106 (161)
.+-++.+.-
T Consensus 360 rt~~V~a~d 368 (419)
T 3rfr_A 360 KEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEeeh
Confidence 999988873
No 15
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=87.09 E-value=2 Score=40.44 Aligned_cols=87 Identities=13% Similarity=0.091 Sum_probs=65.7
Q ss_pred ceEEEEeeeccc----------ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEE-EeecCCCc
Q 031356 29 PFIVAHKKASLK----------RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW-ERLDAGGI 97 (161)
Q Consensus 29 a~LlvsK~i~~~----------~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~-~ri~pg~n 97 (161)
-.+++.|.|... .+++| +++++++++.|-=..+-.|..++=++ =.+..+ ...+. ..|+||+.
T Consensus 572 ~~~~~~~di~l~~P~l~I~v~g~~~v~-~~l~a~vsf~NPL~~~L~~c~~~vEG-----~GL~~~-~~~~~~~~v~Pg~~ 644 (695)
T 1g0d_A 572 GPIMTVANIPLSTPELLVQVPGKAVVW-EPLTAYVSFTNPLPVPLKGGVFTLEG-----AGLLSA-TQIHVNGAVAPSGK 644 (695)
T ss_dssp -EEEEEEEEECBCCCCEEECCSCEETT-CCEEEEEEEECCSSSCEESCEEEEEE-----TTTEEE-EEEECSSEECTTCE
T ss_pred eEEEEEEEEEEcCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCcc-eEEecCCCcCCCCE
Confidence 347777777544 45788 99999999999988888887776311 115555 56777 78999999
Q ss_pred eEEEEEEEEceeeeEEeecEEEEEEcCC
Q 031356 98 LSHSFELDAKVKGMFHGSPALITFRIPT 125 (161)
Q Consensus 98 vsH~vvv~p~~~G~f~~t~A~VtY~~~~ 125 (161)
+++.+.++|++.|.-.+ ++++...+
T Consensus 645 ~~~~~~~~P~~~G~r~L---~a~f~s~~ 669 (695)
T 1g0d_A 645 VSVKLSFSPMRTGVRKL---LVDFDSDR 669 (695)
T ss_dssp EEEEEEECCSSCEEEEE---EEEEECSS
T ss_pred EEEEEEEEcCCccceEE---EEEEECCc
Confidence 99999999999999776 56665554
No 16
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=87.01 E-value=1 Score=42.32 Aligned_cols=88 Identities=11% Similarity=0.212 Sum_probs=68.3
Q ss_pred ceEEEEeeecccc----------cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEE-EeecCCCc
Q 031356 29 PFIVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW-ERLDAGGI 97 (161)
Q Consensus 29 a~LlvsK~i~~~~----------~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~-~ri~pg~n 97 (161)
-.+++.|.|.... +++| +++++++++.|-=..+-.|..|+=++ =.+..+....+. ..|+||+.
T Consensus 574 ~~~~~~~di~l~~P~l~I~v~g~~~v~-~~~~v~v~f~NPL~~~L~~c~~~vEG-----~GL~~~~~~~~~~~~v~pg~~ 647 (687)
T 2q3z_A 574 SYLLAERDLYLENPEIKIRILGEPKQK-RKLVAEVSLQNPLPVALEGCTFTVEG-----AGLTEEQKTVEIPDPVEAGEE 647 (687)
T ss_dssp EEEEEEEEEECBCCCCEEEEESCCSSS-SCEEEEEEEECCSSSCBCSEEEEEEC-----TTTCSSCEEEEECSCBCTTCE
T ss_pred eEEEEEEEEEEeCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCCCceEEecCCCcCCCCE
Confidence 3477777776554 5678 99999999999998888888876321 115566677788 78999999
Q ss_pred eEEEEEEEEceeeeEEeecEEEEEEcCC
Q 031356 98 LSHSFELDAKVKGMFHGSPALITFRIPT 125 (161)
Q Consensus 98 vsH~vvv~p~~~G~f~~t~A~VtY~~~~ 125 (161)
+++.+.++|++.|.-.+ .+++...+
T Consensus 648 ~~~~~~~~P~~~G~~~L---~a~f~s~~ 672 (687)
T 2q3z_A 648 VKVRMDLVPLHMGLHKL---VVNFESDK 672 (687)
T ss_dssp EEEEEEECCCSSSCEEE---EEEEECSS
T ss_pred EEEEEEEEeccccceEE---EEEEEcCc
Confidence 99999999999999876 55665544
No 17
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=85.92 E-value=1.6 Score=40.10 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=52.9
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc-eeeEEEeecCCCceEEEEEEEEceeeeEEeec
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-ISQSWERLDAGGILSHSFELDAKVKGMFHGSP 116 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~-~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~ 116 (161)
...++.| +.+.+..+|+|..+. ..+|++.= -+.+.|.+..+. .+.++ .|+||+..+..+.|+|++.|..+++-
T Consensus 161 P~~v~~G-D~~~i~~~V~N~~~~-~~~v~v~l--~~~~~~~~~~~~~~~~~~-~v~a~~~~~v~f~i~~~~~G~~~i~v 234 (767)
T 4fxk_B 161 PMSVRRF-EQLELRPVLYNYLDK-NLTVSVHV--SPVEGLCLAGGGGLAQQV-LVPAGSARPVAFSVVPTAAAAVSLKV 234 (767)
T ss_dssp CSCEETT-CEEEECCEEEECSSS-CEEEEEEE--CCCTTEECSSSSCCCEEE-EECSSCEEECCEEEEECSCSEEEEEE
T ss_pred CCeeccC-CEEEEEEEEEECCCC-CEEEEEEE--EecCCeEEecCCceeEEE-EEcCCCeEEEEEEEEECccCcEEEEE
Confidence 4567777 999999999999875 34555542 133456555443 34444 69999999999999999999987754
No 18
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=84.73 E-value=1.7 Score=31.66 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=27.1
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 55 IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+.|.++ ...+|.+.+...+...|+ =..|+||++.+++| .+.|.|.+
T Consensus 72 ~~N~d~-~~H~v~~~~~~~g~~~~~---------s~~l~pG~t~~~tF----~~~G~y~y 117 (132)
T 3c75_A 72 WVNGEV-MPHNVAFKKGIVGEDAFR---------GEMMTKDQAYAITF----NEAGSYDY 117 (132)
T ss_dssp EEECSS-SCBCCEECTTTSSSSCEE---------CCCBCTTEEEEEEE----CSCEEEEE
T ss_pred EEECCC-CceEEEEeCCCCCccccc---------ccccCCCCEEEEEc----CCCEEEEE
Confidence 347764 467777765332222232 12578999888776 46676654
No 19
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=84.47 E-value=3.3 Score=41.47 Aligned_cols=77 Identities=16% Similarity=0.095 Sum_probs=55.9
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEeecEE
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~ 118 (161)
...++.| +.+.+..+|+|..+. +.+|++.=. .++.|++..+.....=-.|++|+..+..+.|+|++.|..+++-.-
T Consensus 776 P~sv~rG-E~~~l~~~V~N~~~~-~~~v~V~l~--~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~~~G~~~i~v~a 851 (1451)
T 4acq_A 776 PYSVIRG-EAFTLKATVLNYLPK-CIRVSVQLE--ASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNFTVSA 851 (1451)
T ss_dssp CSEEESS-SCEEEEEEEEECSSS-CEEEEEEEC--CCTTEEEEESCSCCCCEEECTTEEEEEEEEEEECSCEEEEEEEEE
T ss_pred CceEecC-CEEEEEEEEEeccCc-cEEEEEEEE--cCCCeEeecCCCCceEEEECCCCeEEEEEEEEECccceEEEEEEE
Confidence 4566777 999999999999874 445555432 234688876532222236999999999999999999998876544
Q ss_pred E
Q 031356 119 I 119 (161)
Q Consensus 119 V 119 (161)
.
T Consensus 852 ~ 852 (1451)
T 4acq_A 852 E 852 (1451)
T ss_dssp E
T ss_pred E
Confidence 3
No 20
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=83.71 E-value=2.4 Score=28.70 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=32.3
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 55 IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+.|.+. ...+|.+.+..+|.. |+ ++..+..=..+.||++.++++ .+.|.|.+
T Consensus 30 ~~n~~~-~~H~v~~~~~~~p~g-~~--~~~~~~~~~~~~~g~~~~~tf----~~~G~y~y 81 (98)
T 1iuz_A 30 FVNNAG-FPHNIVFDEDAVPAG-VD--ADAISYDDYLNSKGETVVRKL----STPGVYGV 81 (98)
T ss_dssp EEECSS-CCEEEEECTTSSCTT-CC--HHHHCEEEEECSTTCEEEEEC----CSCEEEEE
T ss_pred EEECCC-CCEEEEEeCCCCccc-cc--cccccccccccCCCCEEEEEc----CCCEEEEE
Confidence 348864 688999988667743 32 222222223689999888766 46676654
No 21
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=82.82 E-value=4.9 Score=40.91 Aligned_cols=74 Identities=12% Similarity=-0.004 Sum_probs=52.5
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecC--ceeeEEEeecCCCceEEEEEEEEceeeeEEeec
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG--NISQSWERLDAGGILSHSFELDAKVKGMFHGSP 116 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G--~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~ 116 (161)
...++.| +.+.+..+|||..+.. ..|++.=. .++.|.+.+. .-..+--.|+||+..+..+.|+|++.|..+++-
T Consensus 821 Pysv~rG-Eq~~l~v~VfNy~~~~-~~V~V~L~--~s~~~~~~~~~~~~~~q~v~v~a~~~~~v~f~i~p~~~G~~~i~v 896 (1642)
T 3prx_B 821 PYSVVKN-EQVEIRAILHNYVNED-IYVRVELL--YNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEI 896 (1642)
T ss_dssp CSCEETT-CCEEEEEEEEECSSSC-EEEEEEEC--CCTTEEESCCSSSCCEEEEEECSSEEEEEEEEEEECSCEEEEEEE
T ss_pred CCEEecC-CEEEEEEEEEcCCCCc-EEEEEEEE--cCCCeEeeccCCCcceeEEEECCCCeEEEEEEEEEeecccEEEEE
Confidence 3455667 9999999999999864 44444421 2346766542 111223489999999999999999999988765
No 22
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=81.68 E-value=6.8 Score=37.00 Aligned_cols=85 Identities=9% Similarity=0.029 Sum_probs=57.5
Q ss_pred eEEEEeeec-----ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecC---ceeeEEEeecCCCceEEE
Q 031356 30 FIVAHKKAS-----LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG---NISQSWERLDAGGILSHS 101 (161)
Q Consensus 30 ~LlvsK~i~-----~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G---~~s~~~~ri~pg~nvsH~ 101 (161)
.+.|.|-+. ...++.| +.+.+..+|+|..+..+.+|++.=. .++.|.+.+. ....++ .|+||+..+..
T Consensus 74 ~~~v~kp~~v~~~LP~~v~~G-D~~~i~~~v~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v-~l~~~~~~~v~ 149 (915)
T 2hr0_B 74 EVTVMQDFFIDLRLPYSVVRN-EQVEIRAVLYNYRQNQELKVRVELL--HNPAFCSLATTKRRHQQTV-TIPPKSSLSVP 149 (915)
T ss_dssp EEEECCSSEEEEECCSEEETT-CCEEEEEEEEECCSSCCEEEEEEEC--CCTTEECSCCSSSCEEEEE-EECTTEEEEEE
T ss_pred eEEEeccEEEEccCCCEEecC-cEEEEEEEEEcCCCCeeEEEEEEEe--cCCceEeecCCCCcceeEE-EECCCCeEEEE
Confidence 555555432 3456777 9999999999998723455665532 2345655432 122333 78999999999
Q ss_pred EEEEEceeeeEEeecEE
Q 031356 102 FELDAKVKGMFHGSPAL 118 (161)
Q Consensus 102 vvv~p~~~G~f~~t~A~ 118 (161)
+.|+|.+.|..+++-.-
T Consensus 150 f~i~~~~~G~~~i~v~a 166 (915)
T 2hr0_B 150 YVIVPLKTGLQEVEVKA 166 (915)
T ss_dssp EEEEECSCEEEEEEEEE
T ss_pred EEEEECccceEEEEEEE
Confidence 99999999988775443
No 23
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=79.89 E-value=13 Score=37.41 Aligned_cols=77 Identities=9% Similarity=0.037 Sum_probs=54.1
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecC---ceeeEEEeecCCCceEEEEEEEEceeeeEEee
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG---NISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G---~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t 115 (161)
...++.| +.+.+..+|+|..+..+.+|++.=. ..+.|.+..+ ....+. .|++|+..+..+.|+|.+.|..+++
T Consensus 835 P~sv~~G-D~~~i~~~V~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v-~v~a~~~~~v~f~i~p~~~G~~~i~ 910 (1661)
T 2b39_A 835 PYSVVRN-EQVEIRAILYNYREAENLKVRVELL--YNPAFCSLATAKKRHQQTI-TIPARSSVAVPYVIVPLKIGLHEVE 910 (1661)
T ss_dssp CSCEESS-CEEEEEEEEEECCTTCCEEEEEEEC--CCTTEECSSCSSCCCEEEE-EECTTCEEEEEEEEEECSCEEEEEE
T ss_pred CcEEEeC-CEEEEEEEEEcCCCCccEEEEEEEc--CCCCeEeecCCCCcceEEE-EECCCCcEEEEEEEEEcccCeEEEE
Confidence 3466777 9999999999997724455655532 2345665443 122333 7899999999999999999988776
Q ss_pred cEEE
Q 031356 116 PALI 119 (161)
Q Consensus 116 ~A~V 119 (161)
-.--
T Consensus 911 v~a~ 914 (1661)
T 2b39_A 911 VKAA 914 (1661)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 24
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=79.01 E-value=3.4 Score=28.09 Aligned_cols=47 Identities=15% Similarity=0.189 Sum_probs=28.7
Q ss_pred EEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 50 SVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 50 tV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+|++.+.|.|.. ..++.+.+..+ -..++||++.+.. +++.+.|.|.+
T Consensus 37 tV~~~~~n~d~~-~H~~~~~~~~~---------------~~~~~pg~~~~~~--~t~~~~G~Y~y 83 (100)
T 4hci_A 37 STTLLLKNKGKS-EHTFTIKKLGI---------------DVVVESGKEKNIT--VKPKSAGTYEL 83 (100)
T ss_dssp CEEEEEEECSSS-CEEEEEGGGTE---------------EEEECTTCEEEEE--ECCCSCEEEEE
T ss_pred EEEEEEEcCCCc-eEEEEEecCCc---------------ceeecCCcceeEE--EecccCceEEE
Confidence 455666788764 36666655321 1257888876544 46778887754
No 25
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=78.02 E-value=12 Score=28.33 Aligned_cols=61 Identities=18% Similarity=0.226 Sum_probs=41.3
Q ss_pred ccCceeEEEEEEEEecCCcce----eeEEEec-CC--CCCCCceEecCce-eeEEEeecCCCceEEEEEEE
Q 031356 43 KSGAERISVSIDIHNQGTSTA----YDVSLTD-DS--WPQDKFDVISGNI-SQSWERLDAGGILSHSFELD 105 (161)
Q Consensus 43 v~g~~~vtV~y~IyNvG~s~A----~dV~l~D-~s--fp~~~F~iv~G~~-s~~~~ri~pg~nvsH~vvv~ 105 (161)
..|++=+.|.++|-|.|+.+. ++.+|.| ++ +.. .+. ..+.- ......|.||..++=.++..
T Consensus 43 ~~G~~fviV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~-~~~-~~~~~~~l~~g~L~pG~kvtG~ivFe 111 (159)
T 3cfu_A 43 KDDEERLIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRP-VFS-IEEKGRILMGGTLVSGKKVTGVLSYV 111 (159)
T ss_dssp CCCSEEEEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCC-EEC-STTTTTBCCEEEECTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEEEECCCCceeeCcccEEEEeCCCCEEec-eee-ecccCCcccccccCCCCEEEEEEEEE
Confidence 567689999999999998743 4677765 32 322 221 12221 23346999999999888877
No 26
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=77.90 E-value=2.6 Score=31.01 Aligned_cols=64 Identities=16% Similarity=0.243 Sum_probs=36.3
Q ss_pred EEEEEEEecCCcc----eeeEEEecCCC------------CCCCceEecCceeeE--EEeecCCCceEEEEEEEEceeee
Q 031356 50 SVSIDIHNQGTST----AYDVSLTDDSW------------PQDKFDVISGNISQS--WERLDAGGILSHSFELDAKVKGM 111 (161)
Q Consensus 50 tV~y~IyNvG~s~----A~dV~l~D~sf------------p~~~F~iv~G~~s~~--~~ri~pg~nvsH~vvv~p~~~G~ 111 (161)
+|++++-|.|.-+ -.++.|.+..- +...| +..+..... =..|.||++.++++.....+.|.
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~ 105 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDY-VKAGDERVIAHTSVIGGGETDSVTFDVSKLKEGE 105 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEESSCCCTTC
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccc-cccccchhhccceeeCCCCEEEEEEeccccCCCc
Confidence 4457788999876 79999886321 00011 111222222 23689999998888653334553
Q ss_pred -EEe
Q 031356 112 -FHG 114 (161)
Q Consensus 112 -f~~ 114 (161)
|.|
T Consensus 106 ~Y~f 109 (128)
T 2iaa_C 106 DYAF 109 (128)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 543
No 27
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=75.65 E-value=5.9 Score=27.39 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=28.3
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 55 IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+.|.+. ...+|.+.+...+...|+ -..|+||++.+++| .+.|.|.+
T Consensus 46 ~~N~d~-~~H~v~~~~~~~~~~~~~---------s~~l~~g~~~~~tf----~~~G~y~~ 91 (106)
T 1id2_A 46 WVNGEV-MPHNVAFKKGIVGEDAFR---------GEMMTKDQAYAITF----NEAGSYDY 91 (106)
T ss_dssp EEECSS-SCBCCEECTTTSSSSCEE---------CCCBCTTEEEEEEE----CSCEEEEE
T ss_pred EEECCC-CcEEEEEeCCCCCccccc---------ccccCCCCEEEEEe----CCCEEEEE
Confidence 348875 567888776433333232 12588999888776 46676654
No 28
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=75.18 E-value=8 Score=28.87 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=35.2
Q ss_pred EEEEEEEecCCcceeeEEEecCCCCCCC----ceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 50 SVSIDIHNQGTSTAYDVSLTDDSWPQDK----FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 50 tV~y~IyNvG~s~A~dV~l~D~sfp~~~----F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+|++++.|.|+....++.+....-+-+. -.++.+.. ....|.||++-+.+++.++ +.|.|.|
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~i~PG~sgt~t~tft~-~pGtY~y 135 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTG--FSPVPKDGKFGYTDFTWHP-TAGTYYY 135 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBC--CCCCCBTTBEEEEEEEECC-CSEEEEE
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccc--cccccCCCCceEEEEEEEE-CCceEEE
Confidence 4556677887667788888853211111 11222210 1127889996566666667 8887655
No 29
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=73.44 E-value=22 Score=25.87 Aligned_cols=70 Identities=3% Similarity=0.003 Sum_probs=47.9
Q ss_pred cccCceeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEeecEEEE
Q 031356 42 LKSGAERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120 (161)
Q Consensus 42 ~v~g~~~vtV~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~Vt 120 (161)
.+.| ++++++.++||.=+. -...|.|.. ++.|+...+. ..=.-|.+|+..++.+.++|. |..||+..--.
T Consensus 18 v~rg-E~~~~~~~V~nyl~~~~~v~v~L~~----s~~~~~~~~~--~~t~Clc~~~~~t~~W~i~~l--g~vniTvsAea 88 (118)
T 3es6_B 18 VRPN-DEVTAVLAVQTELKECMVVKTYLIS----SIPLQGAFNY--KYTACLCDDNPKTFYWDFYTN--RTVQIAAVVDV 88 (118)
T ss_dssp ECSS-CCEEEEEEEEECCSSCEEEEEEEEE----SSCCCSGGGC--EEEEEECSSSCEEEEEEECCS--SCEEEEEEEEE
T ss_pred EecC-CEEEEEEEEEecccceEEEEEEecC----CcCEEccCCC--cccEEecCCCceEEEEEEEeC--CeEEEEEEEEE
Confidence 4556 999999999999886 344566654 3455544433 233469999999999999885 66666554433
No 30
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=71.22 E-value=7.6 Score=36.08 Aligned_cols=82 Identities=17% Similarity=0.238 Sum_probs=55.0
Q ss_pred eeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCce---eeEEEe---ecCCCceEEEEEEEEceeeeEEeecEEEE
Q 031356 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI---SQSWER---LDAGGILSHSFELDAKVKGMFHGSPALIT 120 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~---s~~~~r---i~pg~nvsH~vvv~p~~~G~f~~t~A~Vt 120 (161)
..++|+.+|-|.|+-+..+|.-.=-+.|... + ..+ =+-|+| |+||++.+-++.|.++...+|+ . -.
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~--~--~~P~k~L~gF~kv~~L~pGes~~V~~~l~~~~l~~~d-~---~~ 686 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGK--I--DKPFQELKAFHKTRLLNPGESEEVVLEIPVRDLASFN-G---EE 686 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSS--S--CCCSCEEEEEEECCCBCTTCEEEEEEEEEGGGGCEEC-S---SC
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCC--C--CCchHHhhcccccccCCCCCeEEEEEEECHHHhcEEc-C---Ce
Confidence 6899999999999998877643322222211 0 011 123444 5999999999999999999998 2 34
Q ss_pred EEcCCC-cceeEEeecC
Q 031356 121 FRIPTK-AALQEAYSTP 136 (161)
Q Consensus 121 Y~~~~~-~~~q~a~Ss~ 136 (161)
|..+.+ =...+|-||.
T Consensus 687 ~~~e~G~y~v~vG~ss~ 703 (721)
T 2x41_A 687 WVVEAGEYEVRVGASSR 703 (721)
T ss_dssp EEECCEEEEEEEEEETT
T ss_pred EEEeCceEEEEEECCCC
Confidence 556555 2356777774
No 31
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=70.90 E-value=13 Score=27.39 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=46.3
Q ss_pred CceEEEEeeec-ccccccCceeEEEEEEEEecCCcceeeEEEec----CCCCCCCceEecCceeeEEEeecCCCceEEEE
Q 031356 28 VPFIVAHKKAS-LKRLKSGAERISVSIDIHNQGTSTAYDVSLTD----DSWPQDKFDVISGNISQSWERLDAGGILSHSF 102 (161)
Q Consensus 28 ~a~LlvsK~i~-~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D----~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~v 102 (161)
.|.+-++++.+ =-.+..+ +..+-+++|.|.|.-+|. .++.. ....+.-|.+- -.-..|+||+++.-.+
T Consensus 24 ~P~i~v~~~~ldFG~v~~~-~~~~~~l~I~Ntg~vpa~-F~f~~~~~~~~~~~~wl~v~-----P~~G~L~Pge~~~I~v 96 (140)
T 3qbt_B 24 LPSLELSRREFVFENVKFR-QLQKEKFQISNNGQVPCH-FSFIPKLNDSQYCKPWLRAE-----PFEGYLEPNETVDISL 96 (140)
T ss_dssp SCCEEESCCEEEEEEECBT-CCEEEEEEEEECSSSCEE-EEEECCTTCSSSSCTTEEEE-----SCEEEECTTCEEEEEE
T ss_pred CCceEeeeeeEEeeeceee-eeeeeEEEEEcCCccceE-EEEecCCCchhhhhHhhhcC-----CcccccCCCCeeEEEE
Confidence 35566665433 2345556 788999999999999993 44442 11223345552 2346899999988888
Q ss_pred EEE
Q 031356 103 ELD 105 (161)
Q Consensus 103 vv~ 105 (161)
++.
T Consensus 97 ~~~ 99 (140)
T 3qbt_B 97 DVY 99 (140)
T ss_dssp EEC
T ss_pred EEE
Confidence 776
No 32
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=69.62 E-value=10 Score=27.18 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=35.1
Q ss_pred EEEEEEEEecCCcceeeEEEecCCCC--------------CCCceEecCceeeEEE--eecCCCceEEEEEEEEceeeeE
Q 031356 49 ISVSIDIHNQGTSTAYDVSLTDDSWP--------------QDKFDVISGNISQSWE--RLDAGGILSHSFELDAKVKGMF 112 (161)
Q Consensus 49 vtV~y~IyNvG~s~A~dV~l~D~sfp--------------~~~F~iv~G~~s~~~~--ri~pg~nvsH~vvv~p~~~G~f 112 (161)
=+|++++.|.|..+..++.+.+...+ .+.| +-.+.....++ .|.||++.+.++. +.+.|.|
T Consensus 43 ~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~p~~~~~~~~~t~~l~pGet~~v~f~--~~~pG~y 119 (139)
T 2aan_A 43 QTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANY-LPADKSNIIAESPLANGNETVEVTFT--APAAGTY 119 (139)
T ss_dssp CEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTT-CCSCCTTEEEECCCBCTTCEEEEEEE--CCSSEEE
T ss_pred CEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccc-cCcccccccccccccCCCCEEEEEEE--CCCCeEE
Confidence 45667888998753688888763210 0001 00111122222 3899999887765 4467776
Q ss_pred Ee
Q 031356 113 HG 114 (161)
Q Consensus 113 ~~ 114 (161)
.|
T Consensus 120 ~f 121 (139)
T 2aan_A 120 LY 121 (139)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 33
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=68.81 E-value=19 Score=31.52 Aligned_cols=69 Identities=16% Similarity=0.217 Sum_probs=47.6
Q ss_pred eecccccccCceeEEEEEEEEecCCcceeeEEE--e---c-CCCCCCCceEecCceeeEE---EeecCCCceEEEEEEEE
Q 031356 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSL--T---D-DSWPQDKFDVISGNISQSW---ERLDAGGILSHSFELDA 106 (161)
Q Consensus 36 ~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l--~---D-~sfp~~~F~iv~G~~s~~~---~ri~pg~nvsH~vvv~p 106 (161)
++..+-...| +.|.|+++|-|.-+.+...|++ . | --|..+.|.-.- +.. |.|+||++.+++|.++|
T Consensus 218 sLdK~~Y~pG-E~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y~~~V----a~~E~~epV~pgst~~k~~~l~P 292 (380)
T 3ugu_A 218 SLSKEIYYHG-EPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTV----AAEEAQEKVPPNSSLTKTLTLVP 292 (380)
T ss_dssp EESCSEEETT-CCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEEEEEE----EEEECSCCBCTTEEEEEEEEECC
T ss_pred EeCCccCcCC-CEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeEEEEE----EEeccCCcCCCCCeEEeeEEEEE
Confidence 3445667788 9999999999999998876543 2 2 224444333220 112 27999999999999999
Q ss_pred cee
Q 031356 107 KVK 109 (161)
Q Consensus 107 ~~~ 109 (161)
.-.
T Consensus 293 ~l~ 295 (380)
T 3ugu_A 293 LLA 295 (380)
T ss_dssp CGG
T ss_pred ecc
Confidence 754
No 34
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=68.52 E-value=31 Score=33.72 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=50.5
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc-----eeeEEEeecCCCceEEEEEEEEceeeeEE
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-----ISQSWERLDAGGILSHSFELDAKVKGMFH 113 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~-----~s~~~~ri~pg~nvsH~vvv~p~~~G~f~ 113 (161)
...+..| +.+.+..+|+|..+.+ .+|++.=. -+.+.+++++.. .+.+ =.|++|+..+..+.|+|.+.|..+
T Consensus 673 P~~v~~G-d~~~l~~~v~N~~~~~-~~v~v~l~-~~~~~~~~~~~~~~~~~~~~~-v~v~~~~~~~v~f~i~~~~~G~~~ 748 (1325)
T 2pn5_A 673 PYSIKRG-EAVVLQFTLFNNLGAE-YIADVTLY-NVANQTEFVGRPNTDLSYTKS-VSVPPKVGVPISFLIKARKLGEMA 748 (1325)
T ss_dssp CSEEETT-CEEEEEEEEEECSSSC-EEEEEEEE-CGGGCEEETTSCTTCCEEEEE-EEECTTCCEEEEEEEEECSSEEEE
T ss_pred CcEEEcC-CEEEEEEEEEeCCCCc-EEEEEEEe-ecCCceEEeccCCCCCcceEE-EEECCCCeEEEEEEEEEcccceEE
Confidence 4567777 9999999999997753 45555421 111236555432 1233 378999999999999999988776
Q ss_pred ee
Q 031356 114 GS 115 (161)
Q Consensus 114 ~t 115 (161)
++
T Consensus 749 i~ 750 (1325)
T 2pn5_A 749 VR 750 (1325)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 35
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=67.85 E-value=4 Score=29.93 Aligned_cols=54 Identities=17% Similarity=0.286 Sum_probs=30.8
Q ss_pred EEEEEEEecCCcc----eeeEEEecCCC------------CCCCceEecCceeeE--EEeecCCCceEEEEEE
Q 031356 50 SVSIDIHNQGTST----AYDVSLTDDSW------------PQDKFDVISGNISQS--WERLDAGGILSHSFEL 104 (161)
Q Consensus 50 tV~y~IyNvG~s~----A~dV~l~D~sf------------p~~~F~iv~G~~s~~--~~ri~pg~nvsH~vvv 104 (161)
+|++++-|.|.-+ -.++.|.+.+- +...| +..+..... =..|.||++.+.++..
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~l~pGet~svtf~~ 99 (129)
T 2ccw_A 28 QFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDY-VKAGDTRVIAHTKVIGGGESDSVTFDV 99 (129)
T ss_dssp EEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEEG
T ss_pred EEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccc-cccccccceeeeeEECCCCEEEEEEec
Confidence 3457778999876 78998876320 00111 111222221 1358899988888754
No 36
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=66.75 E-value=4.7 Score=29.53 Aligned_cols=54 Identities=11% Similarity=0.322 Sum_probs=31.2
Q ss_pred EEEEEEEecCCcc----eeeEEEecCC---------C---CCCCceEecCceeeEE--EeecCCCceEEEEEE
Q 031356 50 SVSIDIHNQGTST----AYDVSLTDDS---------W---PQDKFDVISGNISQSW--ERLDAGGILSHSFEL 104 (161)
Q Consensus 50 tV~y~IyNvG~s~----A~dV~l~D~s---------f---p~~~F~iv~G~~s~~~--~ri~pg~nvsH~vvv 104 (161)
+|++++-|.|.-+ ..++.|.+.+ . +...| +-.+.....| ..|.||++.+.++..
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~t~~l~pGet~svtf~~ 99 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQY-LKDGDARVIAHTKVIGAGEKDSVTFDV 99 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEEG
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccc-cccccchhheeeeeeCCCCEEEEEEec
Confidence 4557778999876 6899987531 1 00111 1112222222 358999998888864
No 37
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=66.68 E-value=8.7 Score=25.47 Aligned_cols=60 Identities=20% Similarity=0.288 Sum_probs=34.6
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 42 ~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+..| +.++ +.|.+. ...++.+.+..+|.. |+ .|.....=..|+||++.+++|. +.|.|.+
T Consensus 22 v~~G-~~V~----~~n~~~-~~H~~~~~~~~~p~~-~~--~~~~~~~~~~~~pG~~~~~tf~----~~G~y~y 81 (98)
T 2plt_A 22 IKSG-ETVN----FVNNAG-FPHNIVFDEDAIPSG-VN--ADAISRDDYLNAPGETYSVKLT----AAGEYGY 81 (98)
T ss_dssp ECTT-CEEE----EEECSS-CCEEEEECGGGSCTT-CC--HHHHCEEEEECSTTCEEEEECC----SCEEEEE
T ss_pred ECCC-CEEE----EEECCC-CceEEEEeCCCCCCc-cc--cccccccceecCCCCEEEEEeC----CCeEEEE
Confidence 4456 5443 368874 568999988656643 21 1111222236899998887653 5566543
No 38
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=63.31 E-value=5.1 Score=30.92 Aligned_cols=63 Identities=11% Similarity=0.166 Sum_probs=35.6
Q ss_pred EEEEEEecCCcc----eeeEEEecCCCCCC-----------CceEecCceee--EEEeecCCCceEEEEEEEEceeeeEE
Q 031356 51 VSIDIHNQGTST----AYDVSLTDDSWPQD-----------KFDVISGNISQ--SWERLDAGGILSHSFELDAKVKGMFH 113 (161)
Q Consensus 51 V~y~IyNvG~s~----A~dV~l~D~sfp~~-----------~F~iv~G~~s~--~~~ri~pg~nvsH~vvv~p~~~G~f~ 113 (161)
|++++-|.|+.+ -+++.|.+.+-... .| +..+.... .=..|.||++.+.+|.+.+.+.|.|.
T Consensus 69 Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~-v~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~ 147 (167)
T 3ay2_A 69 FTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDY-VKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYK 147 (167)
T ss_dssp EEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTT-SCTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEE
T ss_pred EEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccccc-ccccccchhccceeeCCCCEEEEEEecCCCCCcEEE
Confidence 457778999876 58888876321000 00 11111111 12358899988888765444667665
Q ss_pred e
Q 031356 114 G 114 (161)
Q Consensus 114 ~ 114 (161)
|
T Consensus 148 f 148 (167)
T 3ay2_A 148 F 148 (167)
T ss_dssp E
T ss_pred E
Confidence 4
No 39
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=61.56 E-value=11 Score=27.49 Aligned_cols=45 Identities=7% Similarity=0.133 Sum_probs=29.0
Q ss_pred EEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 54 ~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+..|.+ ...+|...|..+|...- .| .+.||++.+|+| .+.|.|.+
T Consensus 33 ~f~n~~--~~Hnv~~~~~~~p~g~~---------~~-~~~pg~t~s~TF----~~~G~y~Y 77 (124)
T 3ef4_A 33 KFVPTD--KSHNAESVREVWPEGVA---------PV-KGGFSKEVVFNA----EKEGLYVL 77 (124)
T ss_dssp EEECSS--SSCCCEECTTTSCTTSC---------CC-BCCTTCCEEEEC----CSSEEEEE
T ss_pred EEEECC--CCccEEEeCCcCCCCcc---------cc-ccCCCCEEEEEe----CCCeEEEE
Confidence 345766 67899998877775421 01 246999988888 45565543
No 40
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=61.44 E-value=28 Score=32.36 Aligned_cols=85 Identities=16% Similarity=0.279 Sum_probs=54.0
Q ss_pred eeEEEEEEEEecCCcceeeEEEecCCCCCCC----ceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEeecEEEEEE
Q 031356 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQDK----FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~----F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~VtY~ 122 (161)
..++|+++|-|.|+-+..+|.-.=-+.|... -.-..|- .|. .|+||++.+-++.|.++...+|+-.. =.|.
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF--~kv-~L~pGes~~V~~~l~~~~ls~~d~~~--~~w~ 687 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGF--AKL-NLTPGQSGTATFNIRRRDLSYWDTAS--QKWV 687 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEE--EEE-EECTTCEEEEEEEEEGGGGCEEETTT--TEEE
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhc--ccc-eeCCCCeEEEEEEEcHHHeeeeecCC--CeEE
Confidence 6799999999999998877643322233211 0112222 123 39999999999999999988887532 1344
Q ss_pred cCCCc-ceeEEeecC
Q 031356 123 IPTKA-ALQEAYSTP 136 (161)
Q Consensus 123 ~~~~~-~~q~a~Ss~ 136 (161)
.+.+. ...+|-||.
T Consensus 688 ve~G~y~v~vG~sS~ 702 (713)
T 3zyz_A 688 VPSGSFGISVGASSR 702 (713)
T ss_dssp ECCEEEEEEEESSSS
T ss_pred EcCceEEEEEECCCC
Confidence 44442 245666664
No 41
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=61.27 E-value=16 Score=26.39 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=24.7
Q ss_pred eeeEEEecCCCCCC--CceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 63 AYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 63 A~dV~l~D~sfp~~--~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
.++|...+..+|.. .|+ +.||+..+++| .+.|.|.+
T Consensus 39 ~H~v~~~~~~~P~g~~~f~------------~~pg~t~s~TF----~~pG~y~y 76 (123)
T 3erx_A 39 SHNVEAIKEILPEGVESFK------------SKINESYTLTV----TEPGLYGV 76 (123)
T ss_dssp TCCCEECTTSSCTTCCCCB------------CCTTCCEEEEE----CSCEEEEE
T ss_pred CceEEEcCCcCCCCcccee------------cCCCCEEEEEe----CCCeEEEE
Confidence 48888877667753 343 35899888888 46677654
No 42
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=61.01 E-value=30 Score=23.54 Aligned_cols=48 Identities=25% Similarity=0.285 Sum_probs=29.0
Q ss_pred EEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEee
Q 031356 50 SVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (161)
Q Consensus 50 tV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t 115 (161)
+|++.+.|.+.. ..++.+.+. | .+ ..++||++.+..+. +.+.|.|.+-
T Consensus 47 ~V~~~~~n~d~~-~H~~~i~~~-----------~---~~-~~i~pG~~~~~~f~--~~~~G~y~~~ 94 (112)
T 1iby_A 47 AVKVVVENKSPI-SEGFSIDAF-----------G---VQ-EVIKAGETKTISFT--ADKAGAFTIW 94 (112)
T ss_dssp EEEEEEEECSSS-CEEEEEGGG-----------T---EE-EEECTTCEEEEEEE--CCSCEEEEEB
T ss_pred EEEEEEEECCCC-eEEEEEcCC-----------C---ce-eEeCCCCEEEEEEE--CCCCEEEEEE
Confidence 455666677643 445554432 1 12 25899998887774 6678877553
No 43
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=58.43 E-value=13 Score=27.09 Aligned_cols=42 Identities=7% Similarity=0.154 Sum_probs=26.8
Q ss_pred EEecCCcceeeEEEecCCCCCC--CceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 55 IHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 55 IyNvG~s~A~dV~l~D~sfp~~--~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
..|.+. .++|...+..+|.. .|+ +.||++.+++| .+.|.|.+
T Consensus 35 f~n~~~--~H~v~~~~~~~P~g~~~f~------------s~pGet~s~TF----~~pG~y~y 78 (127)
T 3tu6_A 35 FVAKDK--GHNSALMKGGAPEGAETWK------------GKINEEITVTL----SKPGVYMY 78 (127)
T ss_dssp EECSSS--SCCCEECTTCSCTTCCCCB------------CCTTCCCEEEC----CSCEEEEE
T ss_pred EEECCC--CceEEEccCcCCCCcccee------------cCCCCEEEEEe----CCCeEEEE
Confidence 445443 58998887666653 342 25899888877 46666643
No 44
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=57.66 E-value=9.1 Score=25.39 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=30.4
Q ss_pred EEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 54 ~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
++.|.+. ...++.+.+..+|.+. . ..+..=..+.||++.++++ .+.|.|.+
T Consensus 30 ~~~n~~~-~~H~~~~~~~~~~~~~----~-~~~~~~~~~~~g~~~~~tf----~~~G~y~y 80 (97)
T 1b3i_A 30 EFVMNKV-GPHNVIFDKVPAGESA----P-ALSNTKLAIAPGSFYSVTL----GTPGTYSF 80 (97)
T ss_dssp EEEECSS-CCCCBEEEECCTTSCH----H-HHCBCCCCCSCSCCEEEEC----CSCSEEEE
T ss_pred EEEECCC-CCeEEEEeCCCCcccc----c-cccccceecCCCCEEEEEe----CCCeEEEE
Confidence 3448764 5789998887665431 0 0001112588999988866 46676544
No 45
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=56.20 E-value=15 Score=24.34 Aligned_cols=51 Identities=18% Similarity=0.280 Sum_probs=28.7
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 55 IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+.|.+. ...++.+.+..+|... .+..+..=..++||++.+++| .+.|.|.+
T Consensus 31 ~~n~~~-~~H~~~~~~~~~pg~~----~~~~~~~~~~~~pG~~~~~tf----~~~G~y~~ 81 (98)
T 1pcs_A 31 WVNNKL-SPHNIVFDADGVPADT----AAKLSHKGLLFAAGESFTSTF----TEPGTYTY 81 (98)
T ss_dssp EEECSS-CCEEEEECCSSSCHHH----HHHHCEEEEECSTTCEEEEEC----CSCEEEEE
T ss_pred EEECCC-CCcEEEEeCCCCCccc----cccccccccccCCCCEEEEEc----CCCeEEEE
Confidence 348764 5688988876555110 000111113578999888766 45666544
No 46
>3a0j_A Cold shock protein; OB-fold, cytoplasm, transcription, structural genomics, NPPSFA; 1.65A {Thermus thermophilus}
Probab=55.14 E-value=19 Score=23.77 Aligned_cols=45 Identities=16% Similarity=0.276 Sum_probs=32.1
Q ss_pred CCCCceEEEEeeeccc----ccccCceeEEEEEEEEe--cCCcceeeEEEecC
Q 031356 25 SSDVPFIVAHKKASLK----RLKSGAERISVSIDIHN--QGTSTAYDVSLTDD 71 (161)
Q Consensus 25 ~~~~a~LlvsK~i~~~----~~v~g~~~vtV~y~IyN--vG~s~A~dV~l~D~ 71 (161)
.+++..+.+|.+-+.. .|.+| +.++++..--. -| -.|.+|.+.+.
T Consensus 20 ~~~g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~~~kG-~~A~~V~~~~~ 70 (73)
T 3a0j_A 20 REGDTDVFVHYTAINAKGFRTLNEG-DIVTFDVEPGRNGKG-PQAVNVTVVEP 70 (73)
T ss_dssp CTTSCCEEEEGGGBCSSSCSSCCTT-CEEEEEEECCSCCSS-SEEEEEEEEEC
T ss_pred cCCCCcEEEEhhhccccCCCCCCCC-CEEEEEEEECCCCCC-CEEEEEEeCCC
Confidence 4455789999988764 57888 77776655444 44 47899999874
No 47
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=53.99 E-value=27 Score=23.74 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=25.8
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 55 IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+.|.+. ...+|.+.+.. .|.....-..|+||++.++++ .+.|.|.+
T Consensus 45 ~~N~d~-~~H~v~~~~~~---------~g~~~~~~~~~~pG~~~~~tf----~~~G~y~y 90 (105)
T 2ov0_A 45 WINREA-MPHNVHFVAGV---------LGEAALKGPMMKKEQAYSLTF----TEAGTYDY 90 (105)
T ss_dssp EEECSS-SCBCCEECTTT---------SSSSCEECCCBCTTEEEEEEE----CSCEEEEE
T ss_pred EEECCC-CCEEEEEcCCC---------CCcccccccccCCCCEEEEEe----CCCEEEEE
Confidence 348865 56777765421 122111112488999877765 46676654
No 48
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=51.70 E-value=32 Score=24.55 Aligned_cols=43 Identities=12% Similarity=0.177 Sum_probs=27.9
Q ss_pred EEEecCCcceeeEEEecCCCCCC--CceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 54 DIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 54 ~IyNvG~s~A~dV~l~D~sfp~~--~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
++.|.+. ..+|.+.+..+|+. .|. +.||+..+++| .+.|.|.+
T Consensus 32 ~f~n~d~--~H~v~~~~~~~p~~~~~~~------------~~~g~t~~~tF----~~~G~y~y 76 (122)
T 2ux6_A 32 TFIPTDK--GHNVETIKGMIPDGAEAFK------------SKINENYKVTF----TAPGVYGV 76 (122)
T ss_dssp EEEESSS--SCCCEECTTCSCTTCCCCB------------CCTTCCEEEEE----CSCEEEEE
T ss_pred EEEECCC--CcEEEEcccccCCCcceee------------cCCCCEEEEEe----CCCEEEEE
Confidence 4457765 68998887656653 342 35899888877 45566544
No 49
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=49.93 E-value=25 Score=23.26 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=30.7
Q ss_pred EEEecCCcceeeEEEecCCCCCCCceEec-CceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVIS-GNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 54 ~IyNvG~s~A~dV~l~D~sfp~~~F~iv~-G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
++.|.+. ...+|.+.+..+|... +.-. +..... -.++||++.++++. +.|.|.+
T Consensus 28 ~~~n~~~-~~H~v~~~~~~~p~~~-~~~~~~~~~~~-~~~~~G~~~~~tf~----~~G~y~~ 82 (99)
T 1plc_A 28 VFKNNAG-FPHNIVFDEDSIPSGV-DASKISMSEED-LLNAKGETFEVALS----NKGEYSF 82 (99)
T ss_dssp EEEECSS-CCBCCEECTTSSCTTC-CHHHHCCCTTC-CBCSTTCEEEEECC----SCEEEEE
T ss_pred EEEECCC-CceEEEEeCCCCcccc-cccccccccCc-cccCCCCEEEEEEC----CCceEEE
Confidence 3478874 5789999887676431 1000 000000 25789998887662 5666544
No 50
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=46.83 E-value=79 Score=22.82 Aligned_cols=54 Identities=19% Similarity=0.415 Sum_probs=28.1
Q ss_pred EEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCce----EEEEEEEEceeeeE
Q 031356 50 SVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGIL----SHSFELDAKVKGMF 112 (161)
Q Consensus 50 tV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nv----sH~vvv~p~~~G~f 112 (161)
.++++|||.-...-+.+.+-. .-.|.-+..||-.....+. .+.|.+.....|.-
T Consensus 38 ~v~v~I~d~~G~~V~t~~~g~---------~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~~~g~~ 95 (138)
T 3osv_A 38 NVWVNVYDDKGTVVNRINLGQ---------QAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTSIDGKT 95 (138)
T ss_dssp EEEEEEECTTSCEEEEEEEEE---------ECSEEEEEEECSBCTTSCBCCSEEEEEEEEEEETTEE
T ss_pred EEEEEEEcCCCCEEEEEEcCC---------cCCceEEEEECCcCCCCCCCCCccEEEEEEEEcCCeE
Confidence 345555554333444444432 3456668899854432221 56666666655543
No 51
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=46.81 E-value=40 Score=31.99 Aligned_cols=61 Identities=16% Similarity=0.312 Sum_probs=35.6
Q ss_pred eeEEEEEEEEecCCcce---eeEEEecCCCCCCCceEecCce---eeEEEeecCCCceEEEEEEEEc
Q 031356 47 ERISVSIDIHNQGTSTA---YDVSLTDDSWPQDKFDVISGNI---SQSWERLDAGGILSHSFELDAK 107 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s~A---~dV~l~D~sfp~~~F~iv~G~~---s~~~~ri~pg~nvsH~vvv~p~ 107 (161)
...+++.++.|+|+.+. |.+++.-+.-+.-.+.+.-..+ +..-=.|+||++.+-+|++.+.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~ 565 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDAS 565 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECH
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcC
Confidence 46888999999998642 4444432111111222222111 1122368899999999999975
No 52
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=46.07 E-value=24 Score=25.61 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=34.7
Q ss_pred EEEEEEEecCCcc----eeeEEEecCCCC------------CCCceEecCceee--EEEeecCCCceEEEEEEEE-ceee
Q 031356 50 SVSIDIHNQGTST----AYDVSLTDDSWP------------QDKFDVISGNISQ--SWERLDAGGILSHSFELDA-KVKG 110 (161)
Q Consensus 50 tV~y~IyNvG~s~----A~dV~l~D~sfp------------~~~F~iv~G~~s~--~~~ri~pg~nvsH~vvv~p-~~~G 110 (161)
+|++++-|.|.-+ -.++.|...+-+ ...| +..+.... .=..|.||++.+.++...- .+.|
T Consensus 28 ~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~-v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G 106 (129)
T 1cuo_A 28 EFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNF-VTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDE 106 (129)
T ss_dssp EEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTT-SCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTS
T ss_pred EEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccc-cccccccceeeeeEECCCCEEEEEEeccccCCCc
Confidence 4567778999876 688888763210 0011 11111211 1235889998887775310 1456
Q ss_pred eEEe
Q 031356 111 MFHG 114 (161)
Q Consensus 111 ~f~~ 114 (161)
.|.|
T Consensus 107 ~Y~f 110 (129)
T 1cuo_A 107 AYTY 110 (129)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 5544
No 53
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=45.56 E-value=14 Score=24.49 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=33.8
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 42 ~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+..| +.+ ++.|.+. ...++.+.+..||.. ++--.+.....=-.|+||++.++++. +.|.|.+
T Consensus 21 v~~G-~tV----~~~n~~~-~~H~~~~~~~~~p~g-~~~~~~~~~~~~~~~~~G~~~~~~f~----~~G~y~~ 82 (99)
T 1byp_A 21 IASG-EKI----TFKNNAG-FPHNDLFDKKEVPAG-VDVTKISMPEEDLLNAPGEEYSVTLT----EKGTYKF 82 (99)
T ss_dssp ECTT-EEE----EEEECSS-CCBCCEECTTSSCTT-CCHHHHSCCTTCCBCSTTCEEEEEEC----SCEEEEE
T ss_pred ECCC-CEE----EEEECCC-CcceEEEeCCCCccc-cccccccccccceeeCCCCEEEEEeC----CCcEEEE
Confidence 4556 543 3468874 578999988667642 21100000000025789998887653 6666543
No 54
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=45.23 E-value=17 Score=24.37 Aligned_cols=60 Identities=20% Similarity=0.286 Sum_probs=34.3
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc----eeeEEEeecCCCceEEEEEEEE-ceeeeEEe
Q 031356 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN----ISQSWERLDAGGILSHSFELDA-KVKGMFHG 114 (161)
Q Consensus 42 ~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~----~s~~~~ri~pg~nvsH~vvv~p-~~~G~f~~ 114 (161)
+..| +.++ +.|.+. ...++.+.+..+|.+ .|. +...=-.|+||++.+++|+ + .+.|.|.|
T Consensus 24 v~~G-d~V~----~~n~~~-~~H~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~pG~~~~~~f~--~~~~~G~y~y 88 (106)
T 2gim_A 24 IKPG-DTVE----FLNNKV-PPHNVVFDAALNPAK-----SADLAKSLSHKQLLMSPGQSTSTTFP--ADAPAGEYTF 88 (106)
T ss_dssp ECTT-CEEE----EEECSS-SCCCBEECSSSSTTC-----CHHHHHHHCBCSCCCSTTCEEEEECC--TTCCSEEEEE
T ss_pred ECCC-CEEE----EEECCC-CCceEEEeCCCCccc-----ccccchhccccceeeCCCCEEEEEEe--cCCCCceEEE
Confidence 3456 5443 348874 458898887666642 221 1111124889998776443 3 67777654
No 55
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=45.18 E-value=31 Score=24.65 Aligned_cols=44 Identities=14% Similarity=0.147 Sum_probs=27.9
Q ss_pred EEEEecCCcceeeEEEecCCCCCC--CceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 53 IDIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 53 y~IyNvG~s~A~dV~l~D~sfp~~--~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
++..|.+. ..+|.+.++.+|.. .|. +.||++.+++| .+.|.|.+
T Consensus 31 V~f~n~~~--~H~v~~~~~~~p~~~~~~~------------~~pG~t~~~tF----~~~G~y~y 76 (123)
T 1pmy_A 31 IKFLPTDK--GHNVETIKGMAPDGADYVK------------TTVGQEAVVKF----DKEGVYGF 76 (123)
T ss_dssp EEEECSSS--SCCCEECTTSSCTTCCCCB------------CCTTSCEEEEC----CSCEEEEE
T ss_pred EEEEECCC--CcEEEEecccCCCCcccee------------cCCCCEEEEEe----CCCeEEEE
Confidence 34567665 58888887666653 342 35899877776 35565544
No 56
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=44.74 E-value=18 Score=26.78 Aligned_cols=64 Identities=9% Similarity=0.147 Sum_probs=36.0
Q ss_pred EEEEEEEecCCcc----eeeEEEecCC------------CCCCCceEecCceee--EEEeecCCCceEEEEEEEE-ceee
Q 031356 50 SVSIDIHNQGTST----AYDVSLTDDS------------WPQDKFDVISGNISQ--SWERLDAGGILSHSFELDA-KVKG 110 (161)
Q Consensus 50 tV~y~IyNvG~s~----A~dV~l~D~s------------fp~~~F~iv~G~~s~--~~~ri~pg~nvsH~vvv~p-~~~G 110 (161)
+|++++-|.|.-+ -.|+.|.... .|...| +-.+...+ .=..|.||++.+.++...- .+.|
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y-~~~~d~~via~t~~l~pGes~~vtf~~~~l~~~G 106 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDY-LKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGE 106 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTT-SCTTCTTCCEECCCBCTTCEEEEEEEGGGC---C
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhcc-CCCCCccceeccceeCCCcEEEEEEeCcCcCCCc
Confidence 5678899999987 7888887421 111111 11233322 2235899999888773311 1557
Q ss_pred eEEe
Q 031356 111 MFHG 114 (161)
Q Consensus 111 ~f~~ 114 (161)
.|.|
T Consensus 107 ~y~f 110 (125)
T 3fsa_A 107 QYMF 110 (125)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 6655
No 57
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=42.75 E-value=94 Score=23.91 Aligned_cols=68 Identities=18% Similarity=0.134 Sum_probs=44.9
Q ss_pred ecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEcee---eeEE
Q 031356 37 ASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVK---GMFH 113 (161)
Q Consensus 37 i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~---G~f~ 113 (161)
+.=..+.+| ++.+.++++.|.|+.+- .+++. .-|+ .|.+ +..=+.|+||+.-.-.+..-+++. |.+.
T Consensus 10 idFg~v~~g-~~~~~~~~i~N~g~~pl-~i~~~--~~p~-~~~~-----~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~ 79 (220)
T 2qsv_A 10 LLFPISMPE-DEGVVRLVVNNTDESDL-QVAVV--SLPS-FVSL-----DDRAFRLQAREPRELNLSLAVPRNMPPGMKD 79 (220)
T ss_dssp EECCSBCTT-CCCEEEEEEEECSSSCE-EEEEE--ECCT-TEEC-----SCCEEEECSSSCEEEEEEECCCTTCCSEEEE
T ss_pred eEcccccCC-CcceEEEEEEeCCCCce-EEEec--cCCC-ceEe-----eeCcceeCCCCceEEEEEEcchhcccCCcee
Confidence 333455667 88899999999999664 34432 1121 1221 134478999999999998888775 6554
Q ss_pred e
Q 031356 114 G 114 (161)
Q Consensus 114 ~ 114 (161)
-
T Consensus 80 ~ 80 (220)
T 2qsv_A 80 E 80 (220)
T ss_dssp E
T ss_pred e
Confidence 4
No 58
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=42.35 E-value=42 Score=23.95 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=26.3
Q ss_pred EEEecCCcceeeEEEecCCCCCC--CceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 54 DIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 54 ~IyNvG~s~A~dV~l~D~sfp~~--~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+..|.+. ..+|.+.++.+|.. .|. ..||++.+++| .+.|.|.+
T Consensus 32 ~f~~~~~--~H~v~~~~~~~p~~~~~~~------------~~pG~t~~~tF----~~~G~y~y 76 (123)
T 1paz_A 32 TFIPVDK--GHNVESIKDMIPEGAEKFK------------SKINENYVLTV----TQPGAYLV 76 (123)
T ss_dssp EEEESSS--SCCCEECTTCSCTTCCCCB------------CCTTCCEEEEC----CSCEEEEE
T ss_pred EEEECCC--CeEEEEecccCCCCcccee------------cCCCCEEEEEe----CCCEEEEE
Confidence 4456654 48888876656643 232 25898877766 35565544
No 59
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=42.10 E-value=32 Score=25.51 Aligned_cols=50 Identities=16% Similarity=0.340 Sum_probs=31.1
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecC------CCC-CCCceEec--------CceeeEEEeec
Q 031356 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD------SWP-QDKFDVIS--------GNISQSWERLD 93 (161)
Q Consensus 39 ~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~------sfp-~~~F~iv~--------G~~s~~~~ri~ 93 (161)
++....| +-+. |.|.++..-..|+++|- ..+ ++.|+-+. |.+.++|+.++
T Consensus 58 ~~g~~CG-~cv~----Vtn~~nGksV~V~VvD~CP~ggLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V~ 122 (125)
T 1bw3_A 58 RGQAACG-KCLR----VTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVD 122 (125)
T ss_dssp CSGGGTT-CEEE----EEETTTTEEEEEEEEECCSSSSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEEC
T ss_pred CCCcccC-CEEE----eEeCCCCCEEEEEEEEeCCCCCCCCCCHHHHHHHhccCCcccCcEEEEEEEEEe
Confidence 3445567 5444 45666666777888873 234 56776654 45678888775
No 60
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=41.98 E-value=1.2e+02 Score=23.34 Aligned_cols=64 Identities=16% Similarity=0.348 Sum_probs=46.5
Q ss_pred eEEEEEEEEecCCcceeeEEEecCCCCCC------CceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 48 RISVSIDIHNQGTSTAYDVSLTDDSWPQD------KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 48 ~vtV~y~IyNvG~s~A~dV~l~D~sfp~~------~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
.++++|...=.....=..+=|+.++|.+. +||++. ...=.-..|+..++|.+.|=..+.|++-+
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YITK~gwdp~~pLtw~dle~~~---~~~~~~~~p~~~y~~~v~lP~~rsG~hVI 144 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYITKNGWNPNQPLDIKNFDKIA---SIDGKQEVPNKVVKQTINIPTDRKGYHVI 144 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEECTTCCTTSCCCGGGEEEEE---EEEEEEECCCSEEEEEEEECTTCCEEEEE
T ss_pred ceEEEEeeecccCCCeEEEEEcCCCCCCCCCccHHHCeeee---eecCCCcCCCCeEEEEEEeCCCCccCEEE
Confidence 58888888888877788999999999873 577766 22222246778899998863347888743
No 61
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=41.08 E-value=1.1e+02 Score=26.49 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=42.5
Q ss_pred ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEc---eeeeEEee
Q 031356 41 RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK---VKGMFHGS 115 (161)
Q Consensus 41 ~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~---~~G~f~~t 115 (161)
.+..| +..+|+.+|-|.+..+..+.+++= .-+..|+.-. ....++||++.+-.+.|++. ..|.|.++
T Consensus 368 ~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~g~~~t~~~~vt~~~~~~~g~y~l~ 437 (601)
T 1w8o_A 368 ALEPG-QQVTVPVAVTNQSGIAVPKPSLQL--DASPDWQVQG-----SVEPLMPGRQAKGQVTITVPAGTTPGRYRVG 437 (601)
T ss_dssp EECTT-CEEEEEEEEECCSSSCBSSCEEEE--ECCTTSEEEE-----EECCBCTTCEEEEEEEEECCTTCCCEEEEEE
T ss_pred eecCC-ceeEEEEEEECCCceeccCceEEE--ecCCCcEEec-----cccccCCCCceEEEEEEecCCCCCCCcEEee
Confidence 34567 799999999998886554444431 1133343322 34778899998887777754 44666543
No 62
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=40.14 E-value=74 Score=25.74 Aligned_cols=17 Identities=12% Similarity=0.266 Sum_probs=13.2
Q ss_pred eeEEEEEEEEecCCcce
Q 031356 47 ERISVSIDIHNQGTSTA 63 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s~A 63 (161)
.+=.++++|.|.|+.+.
T Consensus 42 ~~k~~sl~l~N~~~~P~ 58 (257)
T 3q48_A 42 SEREVTLRVSNTSGTPV 58 (257)
T ss_dssp TCSEEEEEEEECSSSCE
T ss_pred CCcEEEEEEEeCCCCeE
Confidence 45567889999998754
No 63
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=39.73 E-value=78 Score=27.52 Aligned_cols=77 Identities=17% Similarity=0.260 Sum_probs=51.2
Q ss_pred EEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEe--c--C--CCCCCCceEecCceeeEEEeecCCCceEEEEEE
Q 031356 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLT--D--D--SWPQDKFDVISGNISQSWERLDAGGILSHSFEL 104 (161)
Q Consensus 31 LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~--D--~--sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv 104 (161)
|-+.=++..+-.+.| +.|.|++.|-|.-+.+...|++. - + -|....+.-+-- ...+-+.|+||++.+.++.|
T Consensus 194 l~l~vsLdK~~Y~pG-E~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va-~~e~~e~V~pgst~~k~~~L 271 (392)
T 1suj_A 194 LHLEASLDKEIYYHG-EPINVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVC-AEETNDTVAANSTLSKTFSV 271 (392)
T ss_dssp EEEEEEESCSEEETT-CCEEEEEEEEECSSSEEEEEEEEEEEEEEECSSSCCEEEEEEE-EEECCCCBCTTEEEEEEEEE
T ss_pred EEEEEEeCCccccCC-CEEEEEEEEECCCCCcEeEEEEEEEEEEEEEEecCCcEEEEEE-EEecCCCcCCCCEEEEEEEE
Confidence 444446667788889 99999999999999988775542 2 1 133333321100 00123368999999999999
Q ss_pred EEcee
Q 031356 105 DAKVK 109 (161)
Q Consensus 105 ~p~~~ 109 (161)
+|...
T Consensus 272 ~P~l~ 276 (392)
T 1suj_A 272 TPMLA 276 (392)
T ss_dssp CCCGG
T ss_pred ecccc
Confidence 97765
No 64
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=38.54 E-value=1.1e+02 Score=26.33 Aligned_cols=77 Identities=13% Similarity=0.207 Sum_probs=52.3
Q ss_pred CCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEE--Eec----CCCCCCCceEecCceeeEE---EeecCCCc
Q 031356 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVS--LTD----DSWPQDKFDVISGNISQSW---ERLDAGGI 97 (161)
Q Consensus 27 ~~a~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~--l~D----~sfp~~~F~iv~G~~s~~~---~ri~pg~n 97 (161)
+++ |-+.=++..+-.+.| +.+.|++.|-|.-+.+...|+ |.- -.|....+. ..-++. +.|+||++
T Consensus 194 sG~-l~l~~sldk~~Y~pG-E~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~~~~s~~~~k----~~Va~~e~~~~V~~gs~ 267 (393)
T 1g4m_A 194 DKP-LHLEASLDKEIYYHG-EPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYK----CPVAMEEADDTVAPSST 267 (393)
T ss_dssp SSC-EEEEEEESCSEEETT-CCEEEEEEEEECSSCCEEEEEEEEEEEEEECSSBCEEEE----EEEEEEEECCCBCTTEE
T ss_pred CCC-EEEEEEECCceEcCC-CEEEEEEEEEcCCCCEEeEEEEEEEEEEEEEEecCCceE----EEEEEEecCCcCCCCCE
Confidence 444 566666777888999 999999999999887776654 433 123333332 111222 36999999
Q ss_pred eEEEEEEEEcee
Q 031356 98 LSHSFELDAKVK 109 (161)
Q Consensus 98 vsH~vvv~p~~~ 109 (161)
.++++.|.|...
T Consensus 268 ~~~~~~L~P~l~ 279 (393)
T 1g4m_A 268 FCKVYTLTPFLA 279 (393)
T ss_dssp EEEEEEECCCGG
T ss_pred EeeEEEEcCCCC
Confidence 999999987654
No 65
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=37.46 E-value=40 Score=33.92 Aligned_cols=83 Identities=11% Similarity=0.042 Sum_probs=54.4
Q ss_pred eEEEEeeec-----ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCce---------eeEEEeecCC
Q 031356 30 FIVAHKKAS-----LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI---------SQSWERLDAG 95 (161)
Q Consensus 30 ~LlvsK~i~-----~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~---------s~~~~ri~pg 95 (161)
.+.+.|-+- ...++.| +.+.+..+|+|..+.+ .+|++.=. ..+.|.+..+.. ..+-=.|++|
T Consensus 816 ~~~v~kpf~v~~~LP~~v~~G-D~~~i~~~V~N~~~~~-~~v~v~l~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~a~ 891 (1676)
T 3cu7_A 816 KAKVFKDVFLEMNIPYSVVRG-EQIQLKGTVYNYRTSG-MQFCVKMS--AVEGICTSESPVIDHQGTKSSKCVRQKVEGS 891 (1676)
T ss_dssp EEEECCSEEEEEECCSCEETT-CCEEEEEEEEECSSSC-BCCCCEEC--CCTTEECSSCC----------CCCCCCBCTT
T ss_pred EEEEEeeEEEEccCCcEEEEC-cEEEEEEEEEcCCCCc-EEEEEEEe--cCCCeEEeccccccccccccceeEEEEECCC
Confidence 455555432 3456777 9999999999998753 44444321 234565544321 0122368999
Q ss_pred CceEEEEEEEEceeeeEEeec
Q 031356 96 GILSHSFELDAKVKGMFHGSP 116 (161)
Q Consensus 96 ~nvsH~vvv~p~~~G~f~~t~ 116 (161)
+..+..+.|+|.+.|..+++-
T Consensus 892 ~~~~v~f~i~p~~~G~~~i~v 912 (1676)
T 3cu7_A 892 SSHLVTFTVLPLEIGLHNINF 912 (1676)
T ss_dssp EEEECCEEEEECSSSCCCEEE
T ss_pred CeEEEEEEEEEcccCcEEEEE
Confidence 999999999999988876644
No 66
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei}
Probab=36.82 E-value=29 Score=31.93 Aligned_cols=56 Identities=23% Similarity=0.468 Sum_probs=32.8
Q ss_pred eeEEEEEEEEecCCcceeeEEEecCCCCCC--------CceEecCceeeEEE-eecCCCceEEEEEE
Q 031356 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQD--------KFDVISGNISQSWE-RLDAGGILSHSFEL 104 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~--------~F~iv~G~~s~~~~-ri~pg~nvsH~vvv 104 (161)
..+.|++.|+|.++ .+.+++|.| .+|.+ .|-=..|.-...|+ .++||+...-+|.+
T Consensus 524 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (621)
T 2q2e_B 524 GTVDVAIKVKNFGT-SAYSFRVHE-MLPCKVSGAKPEPKVVTMGNDYDYVWDISASAGSSKVLSYKI 588 (621)
T ss_dssp CCEEEEEEECC-----CCCEEECC-EESCCC---CCCCCEEECSSSEEECEEECCCTTCEEEECCCC
T ss_pred CceEEEEEEEecCC-cccceEEEE-ecCCCccccCCCCeEEecCCceEEEEEEEeCCCCeEEEEEEe
Confidence 57789999999988 566899988 34433 23334555566776 46666655444433
No 67
>1g6p_A Cold shock protein TMCSP; greek-KEY, beta barrel, OB-fold, structural genomics; NMR {Thermotoga maritima} SCOP: b.40.4.5
Probab=35.78 E-value=17 Score=23.44 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=30.1
Q ss_pred CCCceEEEEeeeccc----ccccCceeEEEEEEEEecCCcceeeEEEec
Q 031356 26 SDVPFIVAHKKASLK----RLKSGAERISVSIDIHNQGTSTAYDVSLTD 70 (161)
Q Consensus 26 ~~~a~LlvsK~i~~~----~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D 70 (161)
+++..+.+|.+-+.. .+.+| +.++++..--..| -.|.+|.+.|
T Consensus 20 ~~g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~~G-~~A~~V~~~~ 66 (66)
T 1g6p_A 20 DEGGDVFVHWSAIEMEGFKTLKEG-QVVEFEIQEGKKG-PQAAHVKVVE 66 (66)
T ss_dssp TTSCBCBBCSSSSCCSSCCCCCSS-SEEEEEEECSSSC-CEEEEEEEEC
T ss_pred CCCceEEEEhHHccccCCCCCCCC-CEEEEEEEECCCC-CEEEEEEECC
Confidence 345778888877654 57888 7877666555556 5788888764
No 68
>1c9o_A CSPB, cold-shock protein; beta barrel, homodimer, transcription; 1.17A {Bacillus caldolyticus} SCOP: b.40.4.5 PDB: 2hax_A 1hz9_A 1hzb_A 1i5f_A 1hza_A 1hzc_A 3pf4_A 1csq_A 1nmf_A 1nmg_A 1csp_A 2f52_A 2es2_A 3pf5_A 2i5m_X 2i5l_X
Probab=35.65 E-value=41 Score=21.49 Aligned_cols=41 Identities=24% Similarity=0.239 Sum_probs=30.2
Q ss_pred CCCceEEEEeeeccc----ccccCceeEEEEEEEEecCCcceeeEEE
Q 031356 26 SDVPFIVAHKKASLK----RLKSGAERISVSIDIHNQGTSTAYDVSL 68 (161)
Q Consensus 26 ~~~a~LlvsK~i~~~----~~v~g~~~vtV~y~IyNvG~s~A~dV~l 68 (161)
+++..+.+|.+-+.. .+.+| +.++++..--..| -.|.+|.+
T Consensus 21 ~~g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~kG-~~A~~V~~ 65 (66)
T 1c9o_A 21 EGGSDVFVHFTAIQGEGFKTLEEG-QEVSFEIVQGNRG-PQAANVVK 65 (66)
T ss_dssp TTEEEEEEEGGGBCSSSCCCCCTT-CEEEEEEEEETTE-EEEEEEEE
T ss_pred CCCccEEEEHHHccccCCCCCCCC-CEEEEEEEECCCC-cEeEEEEe
Confidence 445789999988764 48888 8888777666667 46778875
No 69
>2ytx_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=35.22 E-value=52 Score=22.82 Aligned_cols=54 Identities=28% Similarity=0.327 Sum_probs=35.7
Q ss_pred CceEEEEeeeccc---ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCce
Q 031356 28 VPFIVAHKKASLK---RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI 85 (161)
Q Consensus 28 ~a~LlvsK~i~~~---~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~ 85 (161)
+..+++|-+-+.. .+.+| +.++++.. -..|.-.|.+|.+.+. +.-.||-+++..
T Consensus 39 ~~DvFvH~s~i~~~~~~L~~G-~~V~F~v~-~~~~g~~A~~V~~~~~--~~~~~e~~~~~~ 95 (97)
T 2ytx_A 39 VKEIFFHYSEFKGDLETLQPG-DDVEFTIK-DRNGKEVATDVRLLPQ--GTVIFEDISGPS 95 (97)
T ss_dssp CCCEEEETTTCCSCTTSCCSC-CEEEEEEC-CCSSSCBEEEEEECCC--SSCCCCSCCSCC
T ss_pred CceEEEEehHhccccCCCCCC-CEEEEEEE-cCCCCcEEEEEEECCC--CccceeeccCCC
Confidence 3789999887764 57888 77665552 2233347999999874 455566666544
No 70
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=35.13 E-value=1e+02 Score=20.80 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=44.0
Q ss_pred ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEeecEEEE
Q 031356 41 RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120 (161)
Q Consensus 41 ~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~Vt 120 (161)
...+| +...++++-.+.|.. ...|++.+++ |. ... -.+....+=++.+.-+|...|.|.+ .|+
T Consensus 20 ~~~vg-~~~~F~V~~~~aG~~-~l~v~i~~~~----------g~-~~~-~~v~d~~dGty~V~Y~p~~~G~y~i---~V~ 82 (100)
T 3rgh_A 20 RATAG-EVGQFQVDCSSAGSA-ELTIEICSEA----------GL-PAE-VYIQDHGDGTHTITYIPLCPGAYTV---TIK 82 (100)
T ss_dssp EEETT-SCEEEEEECTTSCSC-CEEEEEECTT----------SC-BCE-EEEEECSSSEEEEEEECCSSEEEEE---EEE
T ss_pred CeEcC-CcEEEEEEECCCCCc-eEEEEEECCC----------CC-EeE-EEEEeCCCCEEEEEEEeCCCeeEEE---EEE
Confidence 35677 788888888888774 5788887642 22 112 2334455557888888888888877 477
Q ss_pred EEc
Q 031356 121 FRI 123 (161)
Q Consensus 121 Y~~ 123 (161)
|..
T Consensus 83 ~~g 85 (100)
T 3rgh_A 83 YGG 85 (100)
T ss_dssp ETT
T ss_pred ECC
Confidence 754
No 71
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=35.11 E-value=83 Score=29.86 Aligned_cols=84 Identities=14% Similarity=0.221 Sum_probs=53.5
Q ss_pred eeEEEEEEEEecC-CcceeeEE---EecC--CCCCCCceEecCceeeEEEeecCCCceEEEEEEE-EceeeeEEeecEEE
Q 031356 47 ERISVSIDIHNQG-TSTAYDVS---LTDD--SWPQDKFDVISGNISQSWERLDAGGILSHSFELD-AKVKGMFHGSPALI 119 (161)
Q Consensus 47 ~~vtV~y~IyNvG-~s~A~dV~---l~D~--sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~-p~~~G~f~~t~A~V 119 (161)
..++|+.+|-|.| +-+..+|. +.|. +-+...= -..|-- |. .|+||++.+-++.|. ++...+|+-.. -
T Consensus 735 ~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k-~L~gF~--kv-~L~pGes~~V~~~l~~~~~l~~~d~~~--~ 808 (845)
T 3abz_A 735 DKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVK-ELKGFE--KV-HLEPGEKKTVNIDLELKDAISYFNEEL--G 808 (845)
T ss_dssp SEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSC-EEEEEE--EE-EECTTCEEEEEEEEEHHHHHCEEETTT--T
T ss_pred CeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhh-eeccce--eE-EECCCCEEEEEEEeCChHHeeEEecCC--C
Confidence 5899999999999 87776653 2332 1111111 122221 23 499999999999999 88888887642 1
Q ss_pred EEEcCCC-cceeEEeecC
Q 031356 120 TFRIPTK-AALQEAYSTP 136 (161)
Q Consensus 120 tY~~~~~-~~~q~a~Ss~ 136 (161)
.|..+.+ =.+.+|-||.
T Consensus 809 ~~~~e~G~y~v~vG~ss~ 826 (845)
T 3abz_A 809 KWHVEAGEYLVSVGTSSD 826 (845)
T ss_dssp EEEECSEEEEEEEESSTT
T ss_pred eEEEcCCEEEEEEECCCC
Confidence 3445545 2356777774
No 72
>1wfq_A UNR protein; beta-barrel, translational regulation, RNA chaperone, RNA/DN binding, QB fold, greek-KEY topology, structur genomics; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=33.14 E-value=42 Score=23.03 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=31.1
Q ss_pred CceEEEEeeeccc---ccccCceeEEEEEEEEec-CCcceeeEEEecC
Q 031356 28 VPFIVAHKKASLK---RLKSGAERISVSIDIHNQ-GTSTAYDVSLTDD 71 (161)
Q Consensus 28 ~a~LlvsK~i~~~---~~v~g~~~vtV~y~IyNv-G~s~A~dV~l~D~ 71 (161)
+..++||.+-+.. .|.+| ++++++..--.. |.-.|.+|.+.+.
T Consensus 39 g~DVFvH~s~i~~~~~~L~~G-~~V~F~v~~~~k~Gk~~A~~V~~~~~ 85 (89)
T 1wfq_A 39 QARLFFHCSQYNGNLQDLKVG-DDVEFEVSSDRRTGKPIAVKLVKISG 85 (89)
T ss_dssp TEEEEEETTTCSSCTTTCCTT-CCEEEEEEECSSSCCEEEEEEEESSC
T ss_pred CccEEEEhHHhhCccCCCCCC-CEEEEEEEECCCCCCcEEEEEEECCc
Confidence 3789999888764 68888 777766554444 4357999999874
No 73
>3cam_A Cold-shock domain family protein; cold shock protein, chain SWAP, STRU genomics, oxford protein production facility, OPPF, gene RE; 2.60A {Neisseria meningitidis MC58}
Probab=32.81 E-value=63 Score=20.77 Aligned_cols=39 Identities=28% Similarity=0.340 Sum_probs=30.4
Q ss_pred CceEEEEeeecc----cccccCceeEEEEEEEEecCCcceeeEEE
Q 031356 28 VPFIVAHKKASL----KRLKSGAERISVSIDIHNQGTSTAYDVSL 68 (161)
Q Consensus 28 ~a~LlvsK~i~~----~~~v~g~~~vtV~y~IyNvG~s~A~dV~l 68 (161)
+..+.+|.+-+. +.|.+| +.++++..--..|- .|.+|++
T Consensus 24 g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~kG~-~A~~V~~ 66 (67)
T 3cam_A 24 GEDLFAHFSAINMEGFKTLKEG-QRVSFDVTTGPKGK-QAANIQA 66 (67)
T ss_dssp CCCEEEEGGGBCGGGGSSCCTT-CEEEEEEEEETTEE-EEEEEEE
T ss_pred CccEEEEHHHccccCCCCCCCC-CEEEEEEEECCCCc-cceEEEe
Confidence 578999998876 468888 88888777666775 6878875
No 74
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=32.76 E-value=2.3e+02 Score=25.28 Aligned_cols=70 Identities=9% Similarity=0.128 Sum_probs=43.8
Q ss_pred eeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEeecEEEEEEcC
Q 031356 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIP 124 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~VtY~~~ 124 (161)
...+++-++.|+|.. .-|.+++.- ++..++.---....+ =..|+..+.+++++.+..|.|.+. .++..+.
T Consensus 537 ~~~t~~rtvtnvg~~~~ty~~~v~~----p~gv~v~V~P~~l~f--~~~~~~~~~~vt~~~~~~~~~~~g--~l~w~d~ 607 (621)
T 3vta_A 537 FNQYFNRTLTSVAPQASTYRAMISA----PQGLTISVNPNVLSF--NGLGDRKSFTLTVRGSIKGFVVSA--SLVWSDG 607 (621)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEC----CSSEEEEEESSEEEE--CSTTCEEEEEEEEEECCCSSEEEE--EEEEECS
T ss_pred eEEEEEEEEEccCCCCeEEEEEEEC----CCCcEEEEecCEEEE--cCCCcEEEEEEEEEecCCCceEEE--EEEEEcC
Confidence 467788899999987 456777763 222222110111122 156888899999998888887764 4566543
No 75
>2k5n_A Putative cold-shock protein; GFT protein structure, PSI, nesgc, OB fold, cold shock structural genomics; NMR {Pectobacterium atrosepticum}
Probab=32.34 E-value=70 Score=21.10 Aligned_cols=45 Identities=16% Similarity=0.137 Sum_probs=32.3
Q ss_pred CCCceEEEEeeeccc--ccccCceeEEEEEEEEecCCcceeeEEEecCC
Q 031356 26 SDVPFIVAHKKASLK--RLKSGAERISVSIDIHNQGTSTAYDVSLTDDS 72 (161)
Q Consensus 26 ~~~a~LlvsK~i~~~--~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~s 72 (161)
.++....+|.+-+.. .|.+| ++++++..--..| -.|.+|.+.|.+
T Consensus 22 ~dg~~dFvH~s~i~~~g~l~~G-~~V~F~~~~g~kG-~~A~~V~~~~~~ 68 (74)
T 2k5n_A 22 ENGDNRYFHVIKVANPDLIKKD-AAVTFEPTTNNKG-LSAYAVKVVPLE 68 (74)
T ss_dssp SSSCEEEEEGGGBSSGGGCCTT-CEEEEEEEECSSS-EEEEEEEECCSS
T ss_pred CCCCceEEEHhHcccCCCCCCC-CEEEEEEEeCCCC-ceeEEEEeCCCc
Confidence 334334888877765 68888 8888777655566 579999998853
No 76
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=32.09 E-value=98 Score=19.61 Aligned_cols=20 Identities=15% Similarity=0.363 Sum_probs=13.2
Q ss_pred eecCCCceEEEEEEEEceeeeEEe
Q 031356 91 RLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 91 ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
.++||++.++++ .+.|.|.+
T Consensus 55 ~~~~g~~~~~~f----~~~G~y~~ 74 (91)
T 1bxv_A 55 AFSPGETFEATF----SEPGTYTY 74 (91)
T ss_dssp ECSTTCEEEEEC----CSCEEEEE
T ss_pred eeCCCCEEEEEe----CCCEEEEE
Confidence 578898776654 55666544
No 77
>2kcm_A Cold shock domain family protein; nucleic acid binding protein, beta barrel, structural genomi 2, protein structure initiative; NMR {Shewanella oneidensis}
Probab=32.00 E-value=17 Score=24.28 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=32.8
Q ss_pred CCCCceEEEEeeecc-----cccccCceeEEEEEEEEecCCcceeeEEEecCC
Q 031356 25 SSDVPFIVAHKKASL-----KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDS 72 (161)
Q Consensus 25 ~~~~a~LlvsK~i~~-----~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~s 72 (161)
..++..+.+|.+-+. +.+.+| +.++++..--..|- .|.+|.+.|+.
T Consensus 19 ~~dG~DvFvH~s~i~~~~g~~~l~~G-~~V~F~~~~g~kG~-~A~~V~~~~~~ 69 (74)
T 2kcm_A 19 GDDGESYFLHFSELLDKKDEGKLVKG-SMVHFDPTPTPKGL-AAKAISLPLEH 69 (74)
T ss_dssp ETTSCEECCCGGGSSCSGGGTTCCTT-SEEEEEEECTTTSC-EEEEEECCSCS
T ss_pred cCCCceEEEEhhhcccCCCCCCCCCC-CEEEEEEEECCCCc-eeEEEEEcCcc
Confidence 345578999988876 568888 78776665444553 78899988753
No 78
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=31.52 E-value=99 Score=21.83 Aligned_cols=52 Identities=15% Similarity=0.350 Sum_probs=40.3
Q ss_pred eeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEc
Q 031356 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~ 107 (161)
+..+-..+|+|..+. -|+.|+-+.+ +.| .| .-....|+||+++.-.+.+.|.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p----~~y-~V----rP~~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAP----RRY-CV----RPNSGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCG----GGE-EE----ESCEEEECTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCC----Cce-EE----eCCCcEECCCCeEEEEEEECcC
Confidence 678899999999887 6888887763 334 23 2356899999999998888774
No 79
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=30.35 E-value=1.2e+02 Score=21.22 Aligned_cols=82 Identities=13% Similarity=0.114 Sum_probs=55.5
Q ss_pred ccCCCCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc-eeeEEEeecCCCceEEE
Q 031356 23 FASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-ISQSWERLDAGGILSHS 101 (161)
Q Consensus 23 ~~~~~~a~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~-~s~~~~ri~pg~nvsH~ 101 (161)
+...|+.++.+. .+.+....+| ++..++++..+. .-..+|++.+++ |. ... .+....+-++.
T Consensus 6 ~~~~Daskv~~~-g~~~~~~~vg-~~~~F~V~~~~a--~g~l~v~V~~P~----------g~~~~~---~v~d~~~gty~ 68 (112)
T 2d7p_A 6 SGSDDARRLTVT-SLQETGLKVN-QPASFAVQLNGA--RGVIDARVHTPS----------GAVEEC---YVSELDSDKHT 68 (112)
T ss_dssp CCSCGGGGCEEC-SSCSBCCCTT-CCEEEEEECTTC--CSCEEEEEECSS----------SCBCCC---EECSCBTTEEE
T ss_pred cCCCCcceeEEe-CCCcCCcccC-CcEEEEEEeCCC--CCCEEEEEECCC----------CCeeee---EEEeCCCCeEE
Confidence 345565666665 4556678888 899988888776 246778887642 22 122 34445666788
Q ss_pred EEEEEceeeeEEeecEEEEEEcC
Q 031356 102 FELDAKVKGMFHGSPALITFRIP 124 (161)
Q Consensus 102 vvv~p~~~G~f~~t~A~VtY~~~ 124 (161)
+.-+|+..|.|.+ .|+|...
T Consensus 69 v~ytP~~~G~h~v---~V~~~g~ 88 (112)
T 2d7p_A 69 IRFIPHENGVHSI---DVKFNGA 88 (112)
T ss_dssp EEECCSSCEEEEE---EEEESSC
T ss_pred EEEEcCCCEeEEE---EEEECCe
Confidence 8888999999988 6777654
No 80
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=28.79 E-value=89 Score=31.47 Aligned_cols=76 Identities=11% Similarity=0.190 Sum_probs=53.7
Q ss_pred eeEEEEEEEEecCC----cceeeEEEecCCCCC--------------------CCceEecCceeeEEEeecCCCceEEEE
Q 031356 47 ERISVSIDIHNQGT----STAYDVSLTDDSWPQ--------------------DKFDVISGNISQSWERLDAGGILSHSF 102 (161)
Q Consensus 47 ~~vtV~y~IyNvG~----s~A~dV~l~D~sfp~--------------------~~F~iv~G~~s~~~~ri~pg~nvsH~v 102 (161)
..+.+++.+-+.|. ....+..+.|...|+ +.+|+-.+..-.=+|+|++++...-.|
T Consensus 1398 ~~~~~~v~~~~~~~~~~~~~~s~maivdv~LpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~v~~Y~d~~~~~~~~~~~~ 1477 (1676)
T 3cu7_A 1398 DYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRF 1477 (1676)
T ss_dssp -CCEEEEEEEECCCTTCCSSCCCSEEEEEECCTTCEECHHHHHHHHSSTTCSCSBCCEETTEEEEEESCCCSSSCEEEEE
T ss_pred cEEEEEEEEEEcCccccccCCCCcEEEEEecCcCCccCHHHHHHHhhccccceEEEEecCCEEEEEecccCCCCCEEEEE
Confidence 66777888788874 445666666653433 356776777778889999998899999
Q ss_pred EEEEceeeeEEeecEEEEEE
Q 031356 103 ELDAKVKGMFHGSPALITFR 122 (161)
Q Consensus 103 vv~p~~~G~f~~t~A~VtY~ 122 (161)
.++....|.|.-++...-|.
T Consensus 1478 ~~~~~~~v~~~~Pa~v~vyd 1497 (1676)
T 3cu7_A 1478 RIFELFEVGFLSPATFTVYE 1497 (1676)
T ss_dssp EEECSSCCSSCCCEEEEEEE
T ss_pred EEEEEeEeccccceEEEEEe
Confidence 99999999875544344343
No 81
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=28.58 E-value=72 Score=20.88 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=34.8
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc----eeeEEEeecCCCceEEEEEEEEceeeeEEe
Q 031356 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN----ISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (161)
Q Consensus 42 ~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~----~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~ 114 (161)
+..| +.++ +.|.+. ...++.+.+..+|.. .|. ....=..|+||++.++.|.. |.+.|.|.+
T Consensus 23 v~~G-d~V~----~~N~~~-~~H~v~~~~~~~~~~-----~g~~~~~~~~~~~~i~pG~~~~~~f~~-~~~~G~y~y 87 (105)
T 3cvb_A 23 VHPG-DTVK----WVNNKL-PPHNILFDDKQVPGA-----SKELADKLSHSQLMFSPGESYEITFSS-DFPAGTYTY 87 (105)
T ss_dssp ECTT-EEEE----EEECSS-CCEEEEECTTSSGGG-----CHHHHHHHCEEEEECSTTCEEEEEECT-TSCSEEEEE
T ss_pred EcCC-CEEE----EEECCC-CCCeEEEeCCCCCcc-----cccccccccccccccCCCCeEEEEEec-CCCCeeEEE
Confidence 4456 5543 458864 468888887656541 111 11122368999988765442 256676654
No 82
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=28.50 E-value=2.6e+02 Score=23.34 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=48.4
Q ss_pred CCceEEEEeeecc-cccccCceeEEEEEEEEecCCcceeeEEEec----CCCCCCCceEecCceeeEEEeecCCCceEEE
Q 031356 27 DVPFIVAHKKASL-KRLKSGAERISVSIDIHNQGTSTAYDVSLTD----DSWPQDKFDVISGNISQSWERLDAGGILSHS 101 (161)
Q Consensus 27 ~~a~LlvsK~i~~-~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D----~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~ 101 (161)
..|.+-++++... ..+..+ ...+-+++|.|.|.-+| ..++.. ...++.=+.+ +-.-..|+||++++-.
T Consensus 26 ~~P~v~v~~~~idFg~v~~~-~~~~~~l~i~N~g~~pa-~f~f~~~~~~~~~~~~wl~v-----~p~~g~l~Pge~~~i~ 98 (366)
T 3qis_A 26 FLPSLELSRREFVFENVKFR-QLQKEKFQISNNGQVPC-HFSFIPKLNDSQYCKPWLRA-----EPFEGYLEPNETVDIS 98 (366)
T ss_dssp --CCEEESCSEEEEEEECBT-CCEEEEEEEEECSSSCE-EEEEECCTTCSSSSCTTEEE-----ESCEEEECTTCEEEEE
T ss_pred cCCeEEEecCeEEeeeeeeC-CeEEEEEEEEecCCceE-EEEEEeCCCCCCCCCCcEEE-----eCCccEECCCCEEEEE
Confidence 3466777765442 345667 88999999999999988 344443 1222222333 1234689999998888
Q ss_pred EEEEEce
Q 031356 102 FELDAKV 108 (161)
Q Consensus 102 vvv~p~~ 108 (161)
+.+....
T Consensus 99 l~~~v~~ 105 (366)
T 3qis_A 99 LDVYVSK 105 (366)
T ss_dssp EEECBCT
T ss_pred EEEEECH
Confidence 8886554
No 83
>3uam_A Chitin binding domain; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, protein binding; 2.00A {Burkholderia pseudomallei}
Probab=27.85 E-value=1.2e+02 Score=24.27 Aligned_cols=71 Identities=18% Similarity=0.335 Sum_probs=46.7
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCC------CceEe-----cCceeeEE-----EeecCCCceEEEEEEE
Q 031356 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQD------KFDVI-----SGNISQSW-----ERLDAGGILSHSFELD 105 (161)
Q Consensus 42 ~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~------~F~iv-----~G~~s~~~-----~ri~pg~nvsH~vvv~ 105 (161)
+..| ..++++|...=.....=..+=|+.++|.+. +||++ .+...-.| +...|+..++|.+.|
T Consensus 108 v~~G-~~~tf~w~~TA~H~ts~f~~YITK~gwdp~~pLtw~dLEl~pf~~~~~~~~p~~~~~~d~~~~p~~~y~~~v~l- 185 (216)
T 3uam_A 108 VRSG-QSLQISWSYSMPHKTRRWTYWITKPGWDTQARLARAHFEPDPLKVYLNTYQPYWGPDADKELIPQGETIHEFNL- 185 (216)
T ss_dssp ECTT-CEEEEEEEEESCCCEEEEEEEEBCTTCCTTSCCCGGGBCSSCSEEEECCCCSTTSTTHHHHHSCSSCEEEEEEC-
T ss_pred eccC-ceEEEEEEeeccCCCceEEEEECCCCCCCCCcccHHHccccceeeccCCCccccccccccccCCCCeEEEEEEC-
Confidence 3346 678999988888876678999999888864 45532 11111111 223467789999877
Q ss_pred EceeeeEEe
Q 031356 106 AKVKGMFHG 114 (161)
Q Consensus 106 p~~~G~f~~ 114 (161)
|.+.|++-+
T Consensus 186 P~RsG~hVI 194 (216)
T 3uam_A 186 PTRTGYHVL 194 (216)
T ss_dssp CSCCEEEEE
T ss_pred CCCcCCEEE
Confidence 688888743
No 84
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=27.28 E-value=2e+02 Score=21.66 Aligned_cols=62 Identities=11% Similarity=0.135 Sum_probs=33.4
Q ss_pred cCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEe-cCceeeEEEeecCCCceEEEEEEEEce-eeeEEe
Q 031356 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVI-SGNISQSWERLDAGGILSHSFELDAKV-KGMFHG 114 (161)
Q Consensus 44 ~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv-~G~~s~~~~ri~pg~nvsH~vvv~p~~-~G~f~~ 114 (161)
.| ..++|.-+.- -+..-..|++..|+= .-.-. .+.-+..|..+++| +|++.+++.- .|.-.-
T Consensus 15 ~g-~~vtv~~~As--~d~~V~~Ve~~~dg~---~v~~~t~~~ys~~~~~~~~G---~htlta~A~D~aGn~s~ 78 (190)
T 3pdd_A 15 AG-KDINISATVK--SKTPVSKVEFYNGDT---LISSDTTAPYTAKITGAAVG---AYNLKAVAVLSDGRRIE 78 (190)
T ss_dssp TT-SCEEEEEEEC--CSSCEEEEEEEETTE---EEEEECSSSEEEEECSCCSE---EEEEEEEEEETTSCEEE
T ss_pred CC-CeEEEEEEEe--CCCCEEEEEEEECCE---EEccccCCceEEEeccCCCc---cEEEEEEEEECCCCEee
Confidence 45 5666666665 333455666655420 00001 12236778776666 7999999664 455443
No 85
>3i2z_B RNA chaperone, negative regulator of CSPA transcription; beta barrel, DNA binding protein/transcription, cytoplasm, gene regulation; 1.10A {Salmonella typhimurium} SCOP: b.40.4.5 PDB: 2l15_A 1mjc_A 3mef_A
Probab=27.19 E-value=97 Score=20.03 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=29.1
Q ss_pred CceEEEEeeeccc----ccccCceeEEEEEEEEecCCcceeeEEE
Q 031356 28 VPFIVAHKKASLK----RLKSGAERISVSIDIHNQGTSTAYDVSL 68 (161)
Q Consensus 28 ~a~LlvsK~i~~~----~~v~g~~~vtV~y~IyNvG~s~A~dV~l 68 (161)
+..+.+|.+-+.. .+.+| +.++++..--..| -.|.+|++
T Consensus 28 ~~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~kG-~~A~~V~~ 70 (71)
T 3i2z_B 28 SKDVFVHFSAIQTNGFKTLAEG-QRVEFEITNGAKG-PSAANVTA 70 (71)
T ss_dssp CCCEEEEGGGBCCSSCCCCCTT-CEEEEEEEEETTE-EEEEEEEE
T ss_pred CccEEEEhHHcccccCcCCCCC-CEEEEEEEECCCC-CEeEEEEe
Confidence 3679999887664 57888 8888777766666 46778875
No 86
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=26.72 E-value=1.3e+02 Score=20.66 Aligned_cols=63 Identities=14% Similarity=0.219 Sum_probs=43.3
Q ss_pred cCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEeecEEEEEEc
Q 031356 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRI 123 (161)
Q Consensus 44 ~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~VtY~~ 123 (161)
.| +...++++-.+.|. ....|++.++. |. .... ++.-..+=++.+.-+|...|.|.+ .|+|..
T Consensus 28 ~~-~~~~F~V~~~daG~-~~l~V~v~~p~----------g~-~~~~-~v~d~~dGty~v~Y~p~~~G~y~i---~V~~~g 90 (115)
T 2d7m_A 28 AS-LPVEFTIDARDAGE-GLLTVQILDPE----------GK-PKKA-NIRDNGDGTYTVSYLPDMSGRYTI---TIKYGG 90 (115)
T ss_dssp SS-SCEEEEEEESSSCS-SCEEEEEECTT----------SC-BCCE-EEEECSSSCEEEEECCCSCEEEEE---EEEESS
T ss_pred cC-CcEEEEEEECCCCC-CEEEEEEECCC----------CC-eeee-EEEECCCCEEEEEEEeCCCceEEE---EEEECC
Confidence 56 78899999999987 45788888742 22 1111 222334457888888999999988 778864
No 87
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=26.54 E-value=1.5e+02 Score=21.80 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=42.2
Q ss_pred cCceeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEc
Q 031356 44 SGAERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (161)
Q Consensus 44 ~g~~~vtV~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~ 107 (161)
+.++.++-..+|+|..+. -|+.|+-+.+ +.| .| .-....|+||+++.-.+++.|.
T Consensus 32 ~~~~~~~~~l~L~N~s~~~VaFKVKTT~p----~~y-~V----rP~~GiI~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 32 IESGEKKTLIVLTNVTKNIVAFKVRTTAP----EKY-RV----KPSNSSCDPGASIDIIVSPHGG 87 (152)
T ss_dssp SSSSCCCEEEEEEBCSSSCEEEEEEESCT----TTE-EE----ESSEEEECTTCEEEEEEEECSS
T ss_pred CCCceEEEEEEEEcCCCCeEEEEEECCCC----Cce-ee----cCCCcEECCCCeEEEEEEecCc
Confidence 333677889999999887 6888887763 345 23 3467899999999999999875
No 88
>2yty_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=25.92 E-value=35 Score=23.37 Aligned_cols=45 Identities=18% Similarity=0.080 Sum_probs=32.0
Q ss_pred CceEEEEeeeccc---ccccCceeEEEEEEEEecCCcceeeEEEecCCC
Q 031356 28 VPFIVAHKKASLK---RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSW 73 (161)
Q Consensus 28 ~a~LlvsK~i~~~---~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sf 73 (161)
+..+.+|-+-+.. .+.+| ++++++..--.-|.-.|.+|++.+..+
T Consensus 39 g~DvFvH~S~i~~~~~~L~~G-~~V~F~~~~g~~Gk~~A~~V~~~~~~~ 86 (88)
T 2yty_A 39 DKEIFFHYSEFSGDVDSLELG-DMVEYSLSKGKGNKVSAEKVNKTSGPS 86 (88)
T ss_dssp SCEEEEETTTCCSCTTTCCTT-CEEEECCCCCSCSCCBCCSCEECCCCC
T ss_pred CceEEEEEhhhccccCcCCCC-CEEEEEEEECCCCCeEeEEEEECCCCC
Confidence 5789999877663 67888 787766654444544789999987543
No 89
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=25.20 E-value=1.2e+02 Score=28.47 Aligned_cols=70 Identities=10% Similarity=0.103 Sum_probs=47.9
Q ss_pred ccCceeEEEEEEEEecCCcceeeEEEecCCCCCC--------------------CceE-----ecCceeeEEEeecCCCc
Q 031356 43 KSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQD--------------------KFDV-----ISGNISQSWERLDAGGI 97 (161)
Q Consensus 43 v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~--------------------~F~i-----v~G~~s~~~~ri~pg~n 97 (161)
..| ..+.+++.+-+.|+.. .+..+.|...|+- .+|+ -.+....=+|+|++|+.
T Consensus 631 ~~~-~~~~~~v~v~~~~~~~-~~maivdv~lpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~~~d~~v~~Y~d~l~~~~~ 708 (915)
T 2hr0_B 631 DAK-NTMILEICTRYRGDQD-ATMSILDISMMTGFAPDTDDLKQLANGVDRYISKYELDKAFSDRNTLIIYLDKVSHSED 708 (915)
T ss_dssp SCS-EEEEEEEEEEECSSSC-BCSEEEEEECCSSEEECHHHHHHHHHSSSCSCSEECCCC----CCEEEEEESCBCSSSC
T ss_pred CCC-cEEEEEEEEEecCCCC-CCceEEEEecCCCCccCHhhHHHHhhccccceEEEEeecccCCCCEEEEEeccCCCCCC
Confidence 345 7788888888888654 4677777544431 2333 33444556788999988
Q ss_pred eEEEEEEEEceeeeEEe
Q 031356 98 LSHSFELDAKVKGMFHG 114 (161)
Q Consensus 98 vsH~vvv~p~~~G~f~~ 114 (161)
..-.|.++....|.|.-
T Consensus 709 ~~~~~~~~~~~~v~~~~ 725 (915)
T 2hr0_B 709 DCLAFKVHQYFNVELIQ 725 (915)
T ss_dssp CCEEEEEEESSCCSSCC
T ss_pred EEEEEEEEEEEEecccc
Confidence 89999998888887643
No 90
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=24.49 E-value=4.7e+02 Score=26.31 Aligned_cols=81 Identities=11% Similarity=0.075 Sum_probs=54.5
Q ss_pred cCceeEEEEEEEEecCCcceeeEEEecCCCCC--------------------CCceE----ecCceeeEEEeecCCCceE
Q 031356 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQ--------------------DKFDV----ISGNISQSWERLDAGGILS 99 (161)
Q Consensus 44 ~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~--------------------~~F~i----v~G~~s~~~~ri~pg~nvs 99 (161)
.| ..+.+++.+-+.|+.. .+..+.|...|+ ..+|+ -.+....=+|+|++|+...
T Consensus 1379 ~~-~~~~~~v~~~~~~~~~-~~m~ivdv~lpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~~d~~v~~y~d~l~~~~~~~ 1456 (1661)
T 2b39_A 1379 AK-GSMILDICTKYLGDQD-ATMSILDISMMTGFSPDVEDLKTLSTGVDRYISKYEMNRDSNKNTLIIYLDKVSHTVEDC 1456 (1661)
T ss_dssp CS-CEEEEEEEEEECSSSC-BCSEEEEEECCTTEEECHHHHHHHHHSSBCSCSEEEEESSSSSCEEEEEESCBCSSSCEE
T ss_pred CC-cEEEEEEEEEecCCCC-CceEEEEEecCcCCccCHhHHHHHhhccccceEEEEeeecCCCCEEEEEeccCCCCCceE
Confidence 45 7888888988888765 588888754443 12344 2344455678899998899
Q ss_pred EEEEEEEceeeeEEeecE--EEEEEcCCC
Q 031356 100 HSFELDAKVKGMFHGSPA--LITFRIPTK 126 (161)
Q Consensus 100 H~vvv~p~~~G~f~~t~A--~VtY~~~~~ 126 (161)
-.|.++....|.+.-++. +..|..++.
T Consensus 1457 ~~~~~~~~~~v~~~~Pa~v~vydyY~p~~ 1485 (1661)
T 2b39_A 1457 LSFKVHQYFNVGLIQPGAVKVYSYYNLDE 1485 (1661)
T ss_dssp EEEEEEECSEEESCCCEEEEEEETTCTTS
T ss_pred EEEEEEEEeEccccCceEEEEEeccCCcc
Confidence 999999888888644332 334444444
No 91
>3gld_A Pilin; all-beta, cell adhesion, structural protein, isopeptid WALL, fimbrium, isopeptide bond, membrane; 2.03A {Streptococcus pyogenes serotype M1} PDB: 3b2m_A 3gle_A
Probab=24.45 E-value=2.5e+02 Score=23.39 Aligned_cols=65 Identities=14% Similarity=0.106 Sum_probs=36.7
Q ss_pred eEEEEeeecccccccCceeEEEEEEEEecC---CcceeeEE-------------EecCCCCCCCceEecCceeeEEEeec
Q 031356 30 FIVAHKKASLKRLKSGAERISVSIDIHNQG---TSTAYDVS-------------LTDDSWPQDKFDVISGNISQSWERLD 93 (161)
Q Consensus 30 ~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG---~s~A~dV~-------------l~D~sfp~~~F~iv~G~~s~~~~ri~ 93 (161)
.|-++|++.-+..--. ++..+++++-.-. ....++++ +.+. ....|.|-+|+. ..+..||
T Consensus 161 ~L~V~K~VtG~~~dk~-k~F~Ftl~l~~~~~~~~g~~y~~~~~~~~G~~~~~~~~~~G--~~~tftLKhGes-i~i~gLP 236 (295)
T 3gld_A 161 TLTVKKKVSGTGGDRS-KDFNFGLTLKANQYYKASEKVMIEKTTKGGQAPVQTEASID--QLYHFTLKDGES-IKVTNLP 236 (295)
T ss_dssp EEEEEEEEESTTCCTT-CCEEEEEEECCBTTBCTTCEEEEEEECSSSCCCEEEEEETT--SCEEEEECTTCE-EEEEEEE
T ss_pred ceEEEEEEECCCcccC-CcEEEEEEEeCCccccCCceEEEEEeccCCcccceeEEecC--ceEEEEECCCCE-EEEeCCC
Confidence 5889998876654444 6777777764432 11233333 2221 123465555553 7777777
Q ss_pred CCCce
Q 031356 94 AGGIL 98 (161)
Q Consensus 94 pg~nv 98 (161)
.|...
T Consensus 237 ~G~~Y 241 (295)
T 3gld_A 237 VGVDY 241 (295)
T ss_dssp TTCEE
T ss_pred CCCEE
Confidence 77543
No 92
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.52 E-value=1.3e+02 Score=21.91 Aligned_cols=52 Identities=15% Similarity=0.348 Sum_probs=40.4
Q ss_pred eeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEc
Q 031356 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (161)
Q Consensus 47 ~~vtV~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~ 107 (161)
+..+-..+|+|..+. -|+.|+-+.+ +.| .|. -....|+||+++.-.+.+.|.
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p----~~y-~Vr----P~~GiI~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAP----RRY-CVR----PNSGIIDPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCT----TSE-EEE----SSEEECCTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCC----ccE-EEc----CCCcEECCCCeEEEEEEECCC
Confidence 678889999999887 6888887763 345 232 346889999999999888874
No 93
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=23.13 E-value=1.8e+02 Score=19.80 Aligned_cols=77 Identities=19% Similarity=0.181 Sum_probs=47.4
Q ss_pred ceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEce
Q 031356 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108 (161)
Q Consensus 29 a~LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~ 108 (161)
.+..++-.= ++...+| +...++++-.+.|. ....|++.+++ |. .+ +-.+.-..+=++.+.-+|..
T Consensus 12 ~kv~~~G~G-L~~~~~g-~~~~F~V~~~daG~-~~l~v~i~~~~----------g~-~~-~~~v~d~~dGty~v~Y~p~~ 76 (113)
T 2dia_A 12 SKVVASGPG-LEHGKVG-EAGLLSVDCSEAGP-GALGLEAVSDS----------GT-KA-EVSIQNNKDGTYAVTYVPLT 76 (113)
T ss_dssp GGEEEESGG-GTCEETT-CCCCEEEEESSCCS-CCEEEEEEETT----------TE-EC-EEEEEECTTSEEEEEEECSS
T ss_pred eeeEEECCC-cCCeecC-CCEEEEEEECCCCC-ccEEEEEECCC----------CC-Ee-eEEEEECCCCEEEEEEEeCC
Confidence 334444322 2334667 78888888888877 45677777631 21 12 22334444557888888888
Q ss_pred eeeEEeecEEEEEEc
Q 031356 109 KGMFHGSPALITFRI 123 (161)
Q Consensus 109 ~G~f~~t~A~VtY~~ 123 (161)
.|.|.+ .|+|..
T Consensus 77 ~G~y~i---~V~~~g 88 (113)
T 2dia_A 77 AGMYTL---TMKYGG 88 (113)
T ss_dssp CEEEEE---EEEETT
T ss_pred CccEEE---EEEECC
Confidence 998876 667754
No 94
>3ije_A Integrin alpha-V; integrin structure, activation, EGF domains, FLIM, cell SIGN cell adhesion, cleavage on PAIR of basic residues; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 4g1e_A* 4g1m_A* 1jv2_A* 1l5g_A* 1m1x_A* 1u8c_A*
Probab=21.77 E-value=1.3e+02 Score=28.74 Aligned_cols=44 Identities=23% Similarity=0.394 Sum_probs=31.5
Q ss_pred EEEEeeecccccccC-ceeEEEEEEEEecCCcceeeEEEecCCCCCC
Q 031356 31 IVAHKKASLKRLKSG-AERISVSIDIHNQGTSTAYDVSLTDDSWPQD 76 (161)
Q Consensus 31 LlvsK~i~~~~~v~g-~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~ 76 (161)
|-++=+.....+++| .+++++++++.|.|+ .||+-+|.= .+|+.
T Consensus 606 L~l~~~~~~~~~~vg~~~~l~l~v~v~N~gE-~Ay~t~l~~-~~p~~ 650 (967)
T 3ije_A 606 LEVSVDSDQKKIYIGDDNPLTLIVKAQNQGE-GAYEAELIV-SIPLQ 650 (967)
T ss_dssp EEEEEECSSCEEETTSCEEEEEEEEEEECSS-CEESCEEEE-ECCTT
T ss_pred EEEEEEeCCceEEecCCcEEEEEEEEEeCCC-CcccceEEE-EeCCC
Confidence 444434444455554 478999999999997 699999886 57765
No 95
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=21.74 E-value=1.9e+02 Score=19.43 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=35.6
Q ss_pred cccccCceeEEEEEEEEecCCc-----------ceeeEEEecCCCCCCCceEecCceeeE-EE-----eecCCCceEE
Q 031356 40 KRLKSGAERISVSIDIHNQGTS-----------TAYDVSLTDDSWPQDKFDVISGNISQS-WE-----RLDAGGILSH 100 (161)
Q Consensus 40 ~~~v~g~~~vtV~y~IyNvG~s-----------~A~dV~l~D~sfp~~~F~iv~G~~s~~-~~-----ri~pg~nvsH 100 (161)
..+..| +.+++...|-+.|.. .-.++.|.|+ +|+..++ |+ .|.||..+.-
T Consensus 6 ~dl~~g-~~v~i~~~V~~~~~~r~~~~~~G~~~~v~~~~l~De----------TG~I~~tlW~~~~~~~i~~Gdvv~i 72 (97)
T 3e0e_A 6 SELMPN-LSGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDD----------TGSIRGTLWNELADFEVKKGDIAEV 72 (97)
T ss_dssp GGCCTT-EEEEEEEEEEEECCCEEEC----CCEEEEEEEEEET----------TEEEEEEEEGGGGGCCCCTTCEEEE
T ss_pred HHCCCC-CcEEEEEEEEECCCceEEEcCCCCeeEEEEEEEECC----------CCcEEEEEECCccccccCCCCEEEE
Confidence 556677 788888888887732 3456778886 5777776 87 5888886643
No 96
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=21.66 E-value=1.1e+02 Score=21.44 Aligned_cols=47 Identities=17% Similarity=0.182 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHhhhcccCCCCceEEEE-eeecccccccCceeEEEEEEEEec
Q 031356 7 KSLISVLIALFLISSSFASSDVPFIVAH-KKASLKRLKSGAERISVSIDIHNQ 58 (161)
Q Consensus 7 ~~~~~~llal~~v~~~~~~~~~a~Llvs-K~i~~~~~v~g~~~vtV~y~IyNv 58 (161)
++.+++|+++++++.+.+....|.+-+. ++- ...| +.+++.-.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~P~V~v~~~~~----~~~g-~~~~L~C~~~gF 50 (119)
T 3jts_B 3 RSVALAVLALLSLSGLEAIQRTPKIQVYSRHP----AENG-KSNFLNCYVSGF 50 (119)
T ss_dssp ------------------CCBCCEEEEEESSC----CCTT-SCEEEEEEEEEE
T ss_pred hhhHHHHHHHHhhhhcCCCccCCEEEEEccCc----ccCC-CcEEEEEEEeCc
Confidence 3445677777777766666677887763 321 1234 566766666655
No 97
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=21.47 E-value=1.6e+02 Score=19.61 Aligned_cols=61 Identities=11% Similarity=0.191 Sum_probs=42.4
Q ss_pred EEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeEEEeecCCCceEEEEEEEEceeeeEEee
Q 031356 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (161)
Q Consensus 51 V~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t 115 (161)
+.+.+.+ .......+++-|...-.++| =|......+.|..|....+.+.+.+...|...+.
T Consensus 60 f~f~v~~-~~~~~l~i~V~d~d~~~~~~---iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~ 120 (126)
T 1rlw_A 60 FEFILDP-NQENVLEITLMDANYVMDET---LGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMS 120 (126)
T ss_dssp EEEEECT-TSCCEEEEEEEECCSSCCEE---EEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred EEEEecC-CCCCEEEEEEEECCCCCCce---eEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEE
Confidence 3344433 34567888888833223433 4688888889999999999999988877777654
No 98
>4f98_A Hypothetical protein; PF10976 family protein, DUF2790, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.26A {Pseudomonas aeruginosa}
Probab=21.22 E-value=80 Score=21.13 Aligned_cols=33 Identities=3% Similarity=0.002 Sum_probs=21.4
Q ss_pred EEEEEEEceeeeEEeecEEEEEEcCCCcceeEEe
Q 031356 100 HSFELDAKVKGMFHGSPALITFRIPTKAALQEAY 133 (161)
Q Consensus 100 H~vvv~p~~~G~f~~t~A~VtY~~~~~~~~q~a~ 133 (161)
+++-+.+.. ..=..-+|.++|.++.++...+.|
T Consensus 27 kVis~t~~~-~~C~Vvpa~MtY~DS~G~~~~l~Y 59 (69)
T 4f98_A 27 NVLHRTDNS-TRTGVVPVTVVYEDHSGELHKIRF 59 (69)
T ss_dssp EEEEECCCT-TCCSEEEEEEEEECTTSCEEEEEE
T ss_pred eEEEecCCC-CccceEccEEEEEcCCCCEEEEEE
Confidence 344444333 255678899999999996544544
No 99
>4dh2_A Cellulosome anchoring protein cohesin region; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=20.63 E-value=2.4e+02 Score=21.77 Aligned_cols=48 Identities=13% Similarity=0.339 Sum_probs=33.8
Q ss_pred EEEEeeecccccccCceeEEEEEEEEecCCc--ceeeEEEecCCCCCCCceEec
Q 031356 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTS--TAYDVSLTDDSWPQDKFDVIS 82 (161)
Q Consensus 31 LlvsK~i~~~~~v~g~~~vtV~y~IyNvG~s--~A~dV~l~D~sfp~~~F~iv~ 82 (161)
-.++=++.+....+| ..++|.+++.|+=++ .+.|..| +|.+...++++
T Consensus 15 ~~vqi~Vg~~~~k~G-dtftVpV~l~~VPstGI~~~dF~l---~YD~s~Lev~s 64 (170)
T 4dh2_A 15 YILDVLVEGVKAKAG-DTVEIPLKFENVPSHGIQSFNLSL---YYDSKAIEVLK 64 (170)
T ss_dssp EEEEEEECCEEEETT-CEEEEEEEEESCCTTCBCEEEEEE---ECCTTTEEEEE
T ss_pred cEEEEEEeeeEEecC-CEEEEEEEEccCccCCeEEEeEEE---EECCCEEEEEe
Confidence 445556667778889 999999999999433 3345444 36777777665
No 100
>2ytv_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=20.33 E-value=55 Score=21.90 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=30.1
Q ss_pred ceEEEEeeeccc--ccccCceeEEEEEEEEec-CCcceeeEEEecC
Q 031356 29 PFIVAHKKASLK--RLKSGAERISVSIDIHNQ-GTSTAYDVSLTDD 71 (161)
Q Consensus 29 a~LlvsK~i~~~--~~v~g~~~vtV~y~IyNv-G~s~A~dV~l~D~ 71 (161)
..+++|.+-+.. .+.+| +++++++.--.. |-.-|.+|.+.+.
T Consensus 31 ~DvFvH~s~i~~g~~l~~G-~~V~F~v~~~~k~G~~~A~~V~~~~~ 75 (79)
T 2ytv_A 31 KKLFFHVKEVQDGIELQAG-DEVEFSVILNQRTGKCSACNVWRVSG 75 (79)
T ss_dssp SSEEEETTTCCSSCCCCTT-CEEECBCEECSSSCCEECCSCEECSC
T ss_pred CcEEEEhHHcCCCCcCCCC-CEEEEEEEECCCCCCceeEEEEECCC
Confidence 789999877653 58888 777766654445 4436899999873
No 101
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.22 E-value=2.1e+02 Score=19.37 Aligned_cols=50 Identities=16% Similarity=0.292 Sum_probs=34.9
Q ss_pred EEEEEEec--CCcceeeEEEec-CCCCCCCceEecCceeeEEEeecCCCceEEEEE
Q 031356 51 VSIDIHNQ--GTSTAYDVSLTD-DSWPQDKFDVISGNISQSWERLDAGGILSHSFE 103 (161)
Q Consensus 51 V~y~IyNv--G~s~A~dV~l~D-~sfp~~~F~iv~G~~s~~~~ri~pg~nvsH~vv 103 (161)
+.+.+.+. .......|++-| +.+..++| =|......+.|..|....+-+.
T Consensus 57 f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~---lG~~~i~l~~l~~~~~~~~w~~ 109 (140)
T 2dmh_A 57 LEFDLRGIPLDFSSSLGIIVKDFETIGQNKL---IGTATVALKDLTGDQSRSLPYK 109 (140)
T ss_dssp EEEECSSCCCCTTCEEEEEEEETTCSSSCCC---CEEEEEEGGGTCSSSCEEEEEE
T ss_pred EEEEecccccCCCCEEEEEEEECCCCCCCce---EEEEEEEHHHhccCCCceeEEe
Confidence 34444432 245778889988 55656654 4677888888989988888877
No 102
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=20.19 E-value=2.4e+02 Score=23.46 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=44.1
Q ss_pred cccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCce-eeEEEeecCCCceEEEEEEEEceeeeEEeecEE
Q 031356 40 KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI-SQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118 (161)
Q Consensus 40 ~~~v~g~~~vtV~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~-s~~~~ri~pg~nvsH~vvv~p~~~G~f~~t~A~ 118 (161)
....+| +...++++--+.|.+ ..+|.+.++ +|.. .+... .....+-++.+.-+|+..|.|.+ .
T Consensus 267 ~g~~vg-~p~~F~Vdt~~AG~g-~l~v~V~~P----------~G~~~~~~v~-~~~~~~gty~v~y~P~~~G~~~I---~ 330 (347)
T 4b7l_A 267 TGNMVK-QPAKFTVDTISAGQG-DVMVFVEDP----------EGNKEEAQVT-PDSDKNKTYSVEYLPKVTGLHKV---T 330 (347)
T ss_dssp SCCCTT-SCEEEEEECTTTCSC-CEEEEEECT----------TSCEEECEEE-ESSTTCSEEEEEECCCSSSEEEE---E
T ss_pred cCceeC-CEEEEEEEeCCCCCC-ceEEEEECC----------CCCeecCEEE-EEcCCCCEEEEEEEECCCEeEEE---E
Confidence 346778 888888887787764 468888874 2432 22332 22334456777778888888877 5
Q ss_pred EEEEc
Q 031356 119 ITFRI 123 (161)
Q Consensus 119 VtY~~ 123 (161)
|+|..
T Consensus 331 V~~~g 335 (347)
T 4b7l_A 331 VLFAG 335 (347)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 66654
Done!