Query 031359
Match_columns 161
No_of_seqs 221 out of 1953
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 20:51:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031359.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031359hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 100.0 1.4E-30 4.8E-35 170.3 8.1 99 50-161 2-102 (103)
2 1tq1_A AT5G66040, senescence-a 100.0 3.4E-30 1.1E-34 175.0 10.3 115 47-161 15-129 (129)
3 3gk5_A Uncharacterized rhodane 100.0 3.8E-29 1.3E-33 164.9 11.4 99 49-161 3-101 (108)
4 3foj_A Uncharacterized protein 100.0 1.6E-29 5.6E-34 164.4 8.2 97 50-159 2-100 (100)
5 3eme_A Rhodanese-like domain p 100.0 1.7E-29 5.7E-34 165.2 8.3 99 50-161 2-102 (103)
6 3d1p_A Putative thiosulfate su 100.0 6.7E-28 2.3E-32 165.5 12.1 113 47-160 20-137 (139)
7 1gmx_A GLPE protein; transfera 100.0 3.2E-28 1.1E-32 160.3 9.2 99 49-160 4-103 (108)
8 3hix_A ALR3790 protein; rhodan 100.0 2.7E-28 9.3E-33 160.2 8.7 94 57-161 3-99 (106)
9 3ilm_A ALR3790 protein; rhodan 99.9 7.3E-28 2.5E-32 165.8 10.0 98 52-160 2-102 (141)
10 2hhg_A Hypothetical protein RP 99.9 2.7E-27 9.3E-32 162.3 10.9 103 47-161 19-133 (139)
11 1qxn_A SUD, sulfide dehydrogen 99.9 2.3E-27 7.8E-32 162.6 9.5 103 48-160 21-128 (137)
12 3flh_A Uncharacterized protein 99.9 5.4E-27 1.8E-31 158.1 8.4 100 49-161 14-119 (124)
13 1wv9_A Rhodanese homolog TT165 99.9 1.5E-27 5.3E-32 153.3 5.1 92 51-156 3-94 (94)
14 1urh_A 3-mercaptopyruvate sulf 99.9 2.4E-26 8.3E-31 174.3 11.4 139 23-161 115-278 (280)
15 3nhv_A BH2092 protein; alpha-b 99.9 8.4E-27 2.9E-31 161.0 7.8 100 50-161 16-120 (144)
16 1e0c_A Rhodanese, sulfurtransf 99.9 3.1E-26 1.1E-30 172.9 11.4 138 23-161 110-271 (271)
17 3hzu_A Thiosulfate sulfurtrans 99.9 8.2E-26 2.8E-30 174.5 13.1 138 23-161 140-308 (318)
18 1uar_A Rhodanese; sulfurtransf 99.9 1.5E-25 5E-30 170.3 13.2 139 23-161 108-282 (285)
19 2k0z_A Uncharacterized protein 99.9 2.1E-26 7.3E-31 152.1 7.2 87 62-161 14-102 (110)
20 1rhs_A Sulfur-substituted rhod 99.9 8E-26 2.7E-30 172.8 11.2 138 23-160 123-287 (296)
21 3olh_A MST, 3-mercaptopyruvate 99.9 1.1E-25 3.9E-30 172.5 11.2 137 23-159 138-299 (302)
22 3aay_A Putative thiosulfate su 99.9 4.9E-25 1.7E-29 166.8 12.7 138 23-161 106-275 (277)
23 2fsx_A RV0390, COG0607: rhodan 99.9 2E-25 6.8E-30 154.7 8.9 111 48-161 3-139 (148)
24 1t3k_A Arath CDC25, dual-speci 99.9 1.8E-25 6.2E-30 155.6 5.5 106 48-161 26-141 (152)
25 1e0c_A Rhodanese, sulfurtransf 99.9 2.5E-24 8.5E-29 162.5 12.0 113 49-161 8-129 (271)
26 3tp9_A Beta-lactamase and rhod 99.9 1.1E-24 3.8E-29 176.0 10.5 121 22-161 353-474 (474)
27 1yt8_A Thiosulfate sulfurtrans 99.9 2.1E-24 7.1E-29 177.0 12.2 126 24-161 350-477 (539)
28 2jtq_A Phage shock protein E; 99.9 7E-25 2.4E-29 138.3 5.6 77 65-154 2-80 (85)
29 3hzu_A Thiosulfate sulfurtrans 99.9 5.8E-24 2E-28 164.1 11.5 113 49-161 39-159 (318)
30 3g5j_A Putative ATP/GTP bindin 99.9 2.5E-24 8.4E-29 146.2 8.1 103 50-155 5-130 (134)
31 3i2v_A Adenylyltransferase and 99.9 1.6E-24 5.4E-29 146.0 6.8 105 51-159 2-123 (127)
32 1urh_A 3-mercaptopyruvate sulf 99.9 6.9E-24 2.4E-28 160.8 11.0 112 50-161 4-134 (280)
33 1vee_A Proline-rich protein fa 99.9 2.9E-24 9.9E-29 146.5 7.0 106 49-160 4-123 (134)
34 2eg4_A Probable thiosulfate su 99.9 3E-23 1E-27 153.2 11.2 99 51-161 122-230 (230)
35 2wlr_A Putative thiosulfate su 99.9 4E-23 1.4E-27 164.9 11.8 139 23-161 231-406 (423)
36 1rhs_A Sulfur-substituted rhod 99.9 8.4E-23 2.9E-27 156.1 13.0 113 49-161 7-142 (296)
37 3aay_A Putative thiosulfate su 99.9 3.7E-23 1.3E-27 156.4 10.7 112 50-161 6-125 (277)
38 1qb0_A Protein (M-phase induce 99.9 7.2E-23 2.5E-27 149.6 11.2 102 47-159 41-167 (211)
39 2a2k_A M-phase inducer phospha 99.9 7.5E-23 2.6E-27 145.3 10.6 102 47-159 21-147 (175)
40 3olh_A MST, 3-mercaptopyruvate 99.9 1.3E-22 4.6E-27 155.4 12.8 115 47-161 19-157 (302)
41 1c25_A CDC25A; hydrolase, cell 99.9 5.1E-23 1.7E-27 144.3 9.3 101 48-159 21-145 (161)
42 1uar_A Rhodanese; sulfurtransf 99.9 2.9E-23 9.8E-28 157.7 8.3 112 50-161 8-127 (285)
43 2wlr_A Putative thiosulfate su 99.9 2.1E-22 7E-27 160.8 11.8 112 50-161 124-250 (423)
44 1okg_A Possible 3-mercaptopyru 99.9 1.5E-23 5.2E-28 164.9 4.0 98 62-159 172-292 (373)
45 2vsw_A Dual specificity protei 99.9 7.2E-23 2.5E-27 142.3 6.6 109 50-158 4-130 (153)
46 1okg_A Possible 3-mercaptopyru 99.9 1.6E-22 5.6E-27 159.0 8.8 110 49-160 13-142 (373)
47 3op3_A M-phase inducer phospha 99.9 6.4E-22 2.2E-26 144.8 10.9 99 47-156 54-177 (216)
48 2j6p_A SB(V)-AS(V) reductase; 99.9 4.3E-22 1.5E-26 138.5 9.1 103 49-159 4-120 (152)
49 2ouc_A Dual specificity protei 99.9 3.1E-22 1E-26 137.0 7.7 108 51-160 2-137 (142)
50 1yt8_A Thiosulfate sulfurtrans 99.9 5.7E-22 2E-26 162.5 10.4 100 49-160 6-109 (539)
51 4f67_A UPF0176 protein LPG2838 99.9 6.1E-22 2.1E-26 148.7 9.2 101 48-156 120-223 (265)
52 3utn_X Thiosulfate sulfurtrans 99.9 8.4E-21 2.9E-25 146.6 12.9 107 51-157 185-318 (327)
53 3f4a_A Uncharacterized protein 99.8 3.6E-22 1.2E-26 141.2 4.1 108 47-160 28-157 (169)
54 3tg1_B Dual specificity protei 99.8 2.8E-20 9.6E-25 130.0 10.2 105 47-156 8-143 (158)
55 1hzm_A Dual specificity protei 99.8 2.4E-21 8.2E-26 134.6 4.6 105 49-155 15-142 (154)
56 3ics_A Coenzyme A-disulfide re 99.8 9.5E-21 3.2E-25 156.4 8.7 95 49-156 488-582 (588)
57 3ntd_A FAD-dependent pyridine 99.8 3.7E-21 1.3E-25 157.9 5.3 91 52-156 475-565 (565)
58 2eg4_A Probable thiosulfate su 99.8 7.9E-20 2.7E-24 134.8 7.8 92 63-160 5-102 (230)
59 3r2u_A Metallo-beta-lactamase 99.8 4.7E-21 1.6E-25 154.6 0.7 86 57-154 379-465 (466)
60 3utn_X Thiosulfate sulfurtrans 99.8 1.3E-18 4.4E-23 134.4 11.7 114 47-161 25-160 (327)
61 2gwf_A Ubiquitin carboxyl-term 99.8 1.2E-18 4E-23 121.7 8.4 110 48-159 18-149 (157)
62 1whb_A KIAA0055; deubiqutinati 99.8 1.3E-18 4.5E-23 121.4 8.6 111 47-159 12-144 (157)
63 3tp9_A Beta-lactamase and rhod 99.8 5.6E-19 1.9E-23 142.7 6.9 102 47-160 270-371 (474)
64 3r2u_A Metallo-beta-lactamase 99.5 3.4E-14 1.1E-18 114.6 8.7 80 63-153 295-375 (466)
65 2f46_A Hypothetical protein; s 98.2 3.3E-06 1.1E-10 58.1 7.1 84 52-140 30-129 (156)
66 4erc_A Dual specificity protei 94.9 0.053 1.8E-06 36.0 5.3 84 53-140 24-117 (150)
67 2img_A Dual specificity protei 94.1 0.099 3.4E-06 34.6 5.3 83 53-139 25-117 (151)
68 1xri_A AT1G05000; structural g 94.0 0.14 4.7E-06 34.1 5.8 86 54-140 23-120 (151)
69 1v8c_A MOAD related protein; r 93.8 0.009 3.1E-07 41.5 -0.4 22 65-90 122-143 (168)
70 1fpz_A Cyclin-dependent kinase 92.2 0.4 1.4E-05 33.9 6.3 83 53-139 60-162 (212)
71 1ywf_A Phosphotyrosine protein 92.1 1.1 3.6E-05 33.7 8.8 31 47-77 51-82 (296)
72 2hcm_A Dual specificity protei 92.0 0.22 7.7E-06 33.7 4.6 79 57-140 30-118 (164)
73 2nt2_A Protein phosphatase sli 91.9 0.3 1E-05 32.3 5.1 80 57-139 22-109 (145)
74 1yz4_A DUSP15, dual specificit 91.2 0.41 1.4E-05 32.2 5.2 81 57-140 26-113 (160)
75 1wrm_A Dual specificity phosph 90.4 0.52 1.8E-05 31.9 5.2 82 57-139 25-111 (165)
76 2jgn_A DBX, DDX3, ATP-dependen 90.1 0.75 2.6E-05 31.7 5.9 46 104-150 36-81 (185)
77 2r0b_A Serine/threonine/tyrosi 90.1 1.1 3.8E-05 29.7 6.6 84 56-139 25-118 (154)
78 3ezz_A Dual specificity protei 89.9 1.4 4.7E-05 28.8 6.9 81 58-139 23-109 (144)
79 3rgo_A Protein-tyrosine phosph 89.4 0.51 1.8E-05 31.3 4.5 81 56-140 19-118 (157)
80 2esb_A Dual specificity protei 88.8 0.95 3.2E-05 31.4 5.6 81 58-140 39-126 (188)
81 2wgp_A Dual specificity protei 88.7 0.94 3.2E-05 31.5 5.6 81 57-139 44-131 (190)
82 3rz2_A Protein tyrosine phosph 86.8 2.6 9E-05 29.0 6.9 87 48-139 44-144 (189)
83 2g6z_A Dual specificity protei 86.5 1 3.6E-05 32.0 4.7 28 112-139 81-111 (211)
84 3s4o_A Protein tyrosine phosph 86.4 2 7E-05 28.5 6.0 28 113-140 108-138 (167)
85 3f81_A Dual specificity protei 85.7 1.4 4.7E-05 30.1 5.0 26 114-139 115-143 (183)
86 3s4e_A Dual specificity protei 85.3 2.2 7.6E-05 27.9 5.7 80 58-139 23-109 (144)
87 2rb4_A ATP-dependent RNA helic 84.8 2.1 7.3E-05 28.9 5.5 36 113-149 33-68 (175)
88 1t5i_A C_terminal domain of A 83.5 2.6 8.9E-05 28.5 5.5 44 105-150 23-66 (172)
89 1fuk_A Eukaryotic initiation f 82.8 3.1 0.00011 27.7 5.7 45 104-150 21-65 (165)
90 2hjv_A ATP-dependent RNA helic 82.3 1.8 6.2E-05 28.9 4.3 36 114-150 35-70 (163)
91 2y96_A Dual specificity phosph 82.3 7.9 0.00027 27.4 7.9 28 112-139 137-167 (219)
92 1jzt_A Hypothetical 27.5 kDa p 80.0 9 0.00031 27.8 7.6 30 115-145 59-91 (246)
93 2i4i_A ATP-dependent RNA helic 79.6 4.2 0.00014 31.0 6.0 47 103-150 265-311 (417)
94 2pq5_A Dual specificity protei 78.7 8.9 0.00031 26.7 7.1 27 113-139 130-159 (205)
95 2q05_A Late protein H1, dual s 78.3 5.6 0.00019 27.5 5.9 29 112-140 123-154 (195)
96 3to5_A CHEY homolog; alpha(5)b 77.9 6.1 0.00021 25.7 5.6 42 112-153 10-51 (134)
97 3emu_A Leucine rich repeat and 77.9 4.5 0.00016 27.1 5.2 29 112-140 85-116 (161)
98 2v1x_A ATP-dependent DNA helic 77.3 4.7 0.00016 33.1 6.0 37 113-150 266-302 (591)
99 2i6j_A Ssoptp, sulfolobus solf 77.3 3.8 0.00013 27.0 4.6 23 54-76 18-41 (161)
100 3d3k_A Enhancer of mRNA-decapp 76.6 4.1 0.00014 29.9 4.9 30 115-145 86-118 (259)
101 3cm3_A Late protein H1, dual s 76.6 4.2 0.00014 27.5 4.7 28 113-140 107-137 (176)
102 3d3j_A Enhancer of mRNA-decapp 76.1 4.1 0.00014 30.7 4.9 30 115-145 133-165 (306)
103 2o8n_A APOA-I binding protein; 75.0 4.5 0.00016 29.8 4.8 30 115-145 80-112 (265)
104 3hh1_A Tetrapyrrole methylase 74.4 8.9 0.00031 24.2 5.6 92 49-147 18-116 (117)
105 2p6n_A ATP-dependent RNA helic 73.3 5.1 0.00018 27.6 4.5 36 114-150 54-89 (191)
106 3eaq_A Heat resistant RNA depe 73.3 3.8 0.00013 28.7 3.9 36 114-150 31-66 (212)
107 3gxh_A Putative phosphatase (D 70.6 20 0.00068 23.7 6.9 84 51-140 27-124 (157)
108 1zzw_A Dual specificity protei 68.2 7.1 0.00024 25.4 4.2 28 112-139 81-111 (149)
109 4h3k_B RNA polymerase II subun 67.5 8 0.00027 27.5 4.4 30 115-145 26-56 (214)
110 1oyw_A RECQ helicase, ATP-depe 67.3 5.7 0.0002 32.0 4.2 37 113-150 235-271 (523)
111 3kwp_A Predicted methyltransfe 67.3 23 0.0008 26.3 7.3 106 48-160 27-141 (296)
112 2e0t_A Dual specificity phosph 66.3 8.3 0.00028 25.1 4.2 28 113-140 84-114 (151)
113 4fak_A Ribosomal RNA large sub 66.2 13 0.00044 25.3 5.2 46 105-150 65-115 (163)
114 3i32_A Heat resistant RNA depe 65.8 8.4 0.00029 28.7 4.6 35 114-149 28-62 (300)
115 2hxp_A Dual specificity protei 65.7 6.7 0.00023 25.9 3.7 28 112-139 83-113 (155)
116 4a29_A Engineered retro-aldol 65.0 12 0.00043 27.4 5.2 76 65-142 155-230 (258)
117 3rss_A Putative uncharacterize 64.6 15 0.0005 29.7 6.0 46 113-159 51-109 (502)
118 1xti_A Probable ATP-dependent 62.7 16 0.00055 27.4 5.8 36 113-149 249-284 (391)
119 2p1z_A Phosphoribosyltransfera 62.2 11 0.00036 25.8 4.2 49 112-160 112-169 (180)
120 1ohe_A CDC14B, CDC14B2 phospha 62.1 50 0.0017 25.1 8.9 81 54-139 208-297 (348)
121 2d7d_A Uvrabc system protein B 62.0 12 0.00043 31.1 5.3 42 107-149 438-479 (661)
122 3p9y_A CG14216, LD40846P; phos 61.2 13 0.00043 26.1 4.4 31 114-145 9-40 (198)
123 4ea9_A Perosamine N-acetyltran 60.6 13 0.00045 25.9 4.6 45 114-159 12-56 (220)
124 3czc_A RMPB; alpha/beta sandwi 60.5 24 0.00084 21.9 5.4 26 115-140 19-49 (110)
125 3fwz_A Inner membrane protein 60.2 13 0.00045 23.8 4.3 29 118-147 10-38 (140)
126 1c4o_A DNA nucleotide excision 60.1 11 0.00037 31.5 4.6 38 111-149 436-473 (664)
127 3nme_A Ptpkis1 protein, SEX4 g 59.8 8.1 0.00028 28.8 3.5 24 53-76 28-52 (294)
128 2oud_A Dual specificity protei 58.7 11 0.00038 25.4 3.9 28 112-139 85-115 (177)
129 2yjt_D ATP-dependent RNA helic 62.2 2.2 7.4E-05 28.7 0.0 36 114-150 30-65 (170)
130 1to0_A Hypothetical UPF0247 pr 57.1 22 0.00077 24.2 5.1 48 104-151 60-112 (167)
131 3nbm_A PTS system, lactose-spe 57.0 11 0.00036 23.8 3.2 28 113-140 5-36 (108)
132 1s4d_A Uroporphyrin-III C-meth 56.3 56 0.0019 23.8 7.7 109 48-159 26-143 (280)
133 1hv8_A Putative ATP-dependent 56.2 15 0.0005 27.2 4.5 38 112-150 236-273 (367)
134 1s2m_A Putative ATP-dependent 55.8 12 0.00042 28.2 4.0 37 113-150 257-293 (400)
135 3pey_A ATP-dependent RNA helic 55.8 14 0.00047 27.7 4.3 37 113-150 242-278 (395)
136 3fht_A ATP-dependent RNA helic 55.3 14 0.00047 28.0 4.2 36 113-149 265-300 (412)
137 2j0s_A ATP-dependent RNA helic 54.3 15 0.0005 27.9 4.2 36 114-150 276-311 (410)
138 3m3h_A OPRT, oprtase, orotate 54.3 18 0.00061 26.1 4.4 50 111-160 134-193 (234)
139 1wp9_A ATP-dependent RNA helic 54.2 23 0.00079 27.0 5.4 35 112-147 359-393 (494)
140 3i5x_A ATP-dependent RNA helic 54.1 22 0.00077 28.4 5.5 38 112-150 337-377 (563)
141 3v0d_A Voltage-sensor containi 53.8 14 0.00046 28.3 3.9 83 53-139 51-146 (339)
142 2wns_A Orotate phosphoribosylt 52.2 26 0.00089 24.4 5.0 48 112-159 109-165 (205)
143 2db3_A ATP-dependent RNA helic 51.8 28 0.00095 27.0 5.6 33 116-149 302-334 (434)
144 1vdm_A Purine phosphoribosyltr 51.4 18 0.0006 23.7 3.8 32 113-144 82-116 (153)
145 1rxd_A Protein tyrosine phosph 50.6 47 0.0016 21.3 9.6 88 47-139 22-123 (159)
146 3llv_A Exopolyphosphatase-rela 50.5 24 0.00081 22.4 4.3 29 118-147 9-37 (141)
147 1vch_A Phosphoribosyltransfera 50.4 22 0.00074 23.8 4.2 32 113-144 119-153 (175)
148 2ybo_A Methyltransferase; SUMT 50.0 60 0.002 23.9 6.9 109 48-159 36-153 (294)
149 3ohg_A Uncharacterized protein 49.7 19 0.00065 26.8 4.0 26 124-149 218-243 (285)
150 3jux_A Protein translocase sub 49.6 19 0.00063 31.0 4.3 37 113-150 473-509 (822)
151 3sqw_A ATP-dependent RNA helic 49.5 29 0.00098 28.0 5.4 37 112-149 286-325 (579)
152 2yzk_A OPRT, oprtase, orotate 48.9 29 0.001 23.4 4.7 47 113-159 105-160 (178)
153 1tvm_A PTS system, galactitol- 48.8 16 0.00055 22.9 3.1 27 114-140 21-52 (113)
154 2l2q_A PTS system, cellobiose- 48.3 7.2 0.00025 24.4 1.4 27 114-140 4-34 (109)
155 1zn8_A APRT, adenine phosphori 48.1 24 0.00084 23.7 4.2 32 113-144 119-153 (180)
156 1i5e_A Uracil phosphoribosyltr 48.0 32 0.0011 24.1 4.9 32 114-145 124-158 (209)
157 2l17_A Synarsc, arsenate reduc 47.7 20 0.00067 23.2 3.5 35 116-150 6-41 (134)
158 3o8b_A HCV NS3 protease/helica 47.1 20 0.00067 30.1 4.1 37 113-150 395-431 (666)
159 3dez_A OPRT, oprtase, orotate 47.0 26 0.00089 25.3 4.4 49 111-159 146-204 (243)
160 1vkr_A Mannitol-specific PTS s 46.9 19 0.00067 23.1 3.3 26 114-139 13-43 (125)
161 2geb_A Hypoxanthine-guanine ph 46.4 25 0.00087 23.9 4.1 32 113-144 97-131 (185)
162 1e2b_A Enzyme IIB-cellobiose; 46.2 15 0.0005 22.9 2.6 26 115-140 4-33 (106)
163 3eiq_A Eukaryotic initiation f 46.1 16 0.00054 27.7 3.3 44 105-150 272-315 (414)
164 3h1g_A Chemotaxis protein CHEY 46.0 48 0.0017 20.1 5.2 12 129-140 20-31 (129)
165 3rh0_A Arsenate reductase; oxi 46.0 14 0.00049 24.5 2.6 35 115-149 21-56 (148)
166 3tsm_A IGPS, indole-3-glycerol 45.6 52 0.0018 24.2 5.9 76 65-142 171-246 (272)
167 2j16_A SDP-1, tyrosine-protein 45.3 30 0.001 23.6 4.3 28 112-139 115-145 (182)
168 1ve2_A Uroporphyrin-III C-meth 45.2 77 0.0026 22.2 8.1 108 48-159 14-129 (235)
169 2fsf_A Preprotein translocase 45.1 36 0.0012 29.5 5.4 38 112-150 439-476 (853)
170 2dy0_A APRT, adenine phosphori 45.0 29 0.00099 23.7 4.2 48 112-159 124-181 (190)
171 1y0b_A Xanthine phosphoribosyl 44.7 29 0.00099 23.8 4.2 48 112-159 118-175 (197)
172 3jx9_A Putative phosphoheptose 44.1 40 0.0014 23.0 4.7 33 110-142 74-108 (170)
173 1hgx_A HGXPRTASE, hypoxanthine 43.8 30 0.001 23.5 4.1 32 113-144 94-128 (183)
174 1dku_A Protein (phosphoribosyl 43.7 35 0.0012 25.7 4.8 34 113-146 216-252 (317)
175 1g2q_A Adenine phosphoribosylt 43.7 31 0.0011 23.5 4.2 32 112-143 120-154 (187)
176 3ndc_A Precorrin-4 C(11)-methy 43.6 90 0.0031 22.5 7.5 104 48-159 15-127 (264)
177 1tf5_A Preprotein translocase 43.2 25 0.00086 30.4 4.2 37 113-150 431-467 (844)
178 2g1u_A Hypothetical protein TM 43.2 32 0.0011 22.3 4.1 31 114-146 19-49 (155)
179 4etn_A LMPTP, low molecular we 43.0 7.1 0.00024 27.1 0.8 39 114-153 34-77 (184)
180 3n0a_A Tyrosine-protein phosph 42.8 51 0.0017 25.4 5.6 72 63-139 62-142 (361)
181 1wd5_A Hypothetical protein TT 42.6 35 0.0012 23.6 4.4 33 113-145 119-154 (208)
182 1yfz_A Hypoxanthine-guanine ph 42.4 31 0.0011 23.9 4.1 32 113-144 117-151 (205)
183 3mm4_A Histidine kinase homolo 41.8 56 0.0019 22.1 5.3 39 114-152 61-99 (206)
184 1nkt_A Preprotein translocase 41.7 35 0.0012 29.8 4.9 38 112-150 458-495 (922)
185 1ufr_A TT1027, PYR mRNA-bindin 41.6 32 0.0011 23.2 4.0 32 113-144 95-130 (181)
186 1wyz_A Putative S-adenosylmeth 41.0 37 0.0013 24.2 4.4 106 52-159 21-135 (242)
187 1o6d_A Hypothetical UPF0247 pr 41.0 49 0.0017 22.4 4.7 48 104-152 55-107 (163)
188 1tc1_A Protein (hypoxanthine p 40.5 34 0.0012 24.2 4.1 32 113-144 102-136 (220)
189 1l1q_A Adenine phosphoribosylt 40.3 42 0.0014 22.8 4.4 31 113-143 116-151 (186)
190 1pzm_A HGPRT, hypoxanthine-gua 40.3 36 0.0012 23.8 4.1 32 113-144 117-151 (211)
191 1b4b_A Arginine repressor; cor 40.3 34 0.0012 19.6 3.3 25 112-136 45-69 (71)
192 3e05_A Precorrin-6Y C5,15-meth 39.8 80 0.0027 21.1 5.9 39 101-139 122-160 (204)
193 1o5o_A Uracil phosphoribosyltr 39.7 49 0.0017 23.6 4.8 32 114-145 136-170 (221)
194 1yks_A Genome polyprotein [con 39.5 36 0.0012 26.6 4.4 33 114-147 177-209 (440)
195 1ao0_A Glutamine phosphoribosy 39.3 44 0.0015 26.4 4.9 33 113-145 337-372 (459)
196 1a3c_A PYRR, pyrimidine operon 39.2 36 0.0012 22.8 3.9 32 113-144 97-132 (181)
197 1u9y_A RPPK;, ribose-phosphate 38.6 43 0.0015 24.7 4.5 32 113-144 204-238 (284)
198 1jl3_A Arsenate reductase; alp 38.4 34 0.0012 22.1 3.6 35 115-149 4-39 (139)
199 3rof_A Low molecular weight pr 38.3 20 0.00068 24.1 2.4 38 115-152 7-49 (158)
200 4e16_A Precorrin-4 C(11)-methy 38.0 1.1E+02 0.0037 21.8 7.6 103 49-159 17-128 (253)
201 3gh1_A Predicted nucleotide-bi 37.8 43 0.0015 26.7 4.5 28 113-140 145-179 (462)
202 1pjq_A CYSG, siroheme synthase 37.7 1.1E+02 0.0038 24.0 7.1 110 48-159 227-344 (457)
203 3mjd_A Orotate phosphoribosylt 37.6 39 0.0013 24.2 4.0 29 113-141 135-166 (232)
204 3ipz_A Monothiol glutaredoxin- 37.5 48 0.0017 20.2 4.1 28 113-140 16-49 (109)
205 2aee_A OPRT, oprtase, orotate 37.0 44 0.0015 23.2 4.2 31 112-142 115-148 (211)
206 1jbe_A Chemotaxis protein CHEY 36.4 69 0.0024 19.1 5.5 32 117-148 7-38 (128)
207 1lss_A TRK system potassium up 36.4 49 0.0017 20.4 4.1 24 122-146 11-34 (140)
208 2lpm_A Two-component response 36.2 39 0.0013 21.4 3.5 37 116-152 10-46 (123)
209 1xxa_A ARGR, arginine represso 36.1 37 0.0013 19.8 3.1 26 112-137 48-73 (78)
210 8abp_A L-arabinose-binding pro 36.1 96 0.0033 22.0 6.1 29 117-145 199-229 (306)
211 4gl2_A Interferon-induced heli 36.0 70 0.0024 26.2 5.9 34 114-148 400-439 (699)
212 3k5w_A Carbohydrate kinase; 11 35.8 57 0.0019 26.1 5.0 36 107-144 39-77 (475)
213 1vl6_A Malate oxidoreductase; 35.7 47 0.0016 25.9 4.4 33 113-146 191-223 (388)
214 1ecf_A Glutamine phosphoribosy 35.1 56 0.0019 26.2 5.0 33 113-145 358-393 (504)
215 2zfz_A Arginine repressor; DNA 35.0 34 0.0012 20.0 2.8 25 112-136 53-77 (79)
216 2ywu_A Hypoxanthine-guanine ph 35.0 50 0.0017 22.5 4.1 31 113-143 94-127 (181)
217 1k92_A Argininosuccinate synth 34.8 49 0.0017 26.3 4.5 30 111-140 7-36 (455)
218 2p5m_A Arginine repressor; alp 34.6 42 0.0014 19.8 3.2 25 112-136 57-81 (83)
219 1z5z_A Helicase of the SNF2/RA 34.6 39 0.0013 24.5 3.7 37 113-150 111-148 (271)
220 2v6i_A RNA helicase; membrane, 34.4 49 0.0017 25.7 4.5 36 114-150 171-206 (431)
221 2gqw_A Ferredoxin reductase; f 34.3 1.3E+02 0.0045 22.8 6.9 43 102-146 133-175 (408)
222 3hvu_A Hypoxanthine phosphorib 34.1 59 0.002 22.7 4.4 31 113-143 115-148 (204)
223 2wmy_A WZB, putative acid phos 34.1 33 0.0011 22.6 2.9 35 115-150 9-44 (150)
224 2e55_A Uracil phosphoribosyltr 34.0 51 0.0018 23.2 4.1 31 114-144 121-154 (208)
225 1npy_A Hypothetical shikimate 33.9 60 0.002 23.7 4.6 35 113-148 118-152 (271)
226 1p6q_A CHEY2; chemotaxis, sign 33.7 77 0.0026 18.9 4.8 6 134-139 26-31 (129)
227 3q87_B N6 adenine specific DNA 33.7 75 0.0026 20.8 4.8 42 102-144 105-146 (170)
228 3e8x_A Putative NAD-dependent 33.4 60 0.002 22.3 4.5 32 114-146 21-52 (236)
229 3c85_A Putative glutathione-re 33.4 49 0.0017 21.9 3.9 30 116-147 41-71 (183)
230 3tum_A Shikimate dehydrogenase 33.3 75 0.0026 23.2 5.1 34 113-147 124-157 (269)
231 2pfu_A Biopolymer transport EX 33.1 77 0.0026 18.7 4.6 34 112-145 55-91 (99)
232 2jbh_A Phosphoribosyltransfera 33.1 52 0.0018 23.2 4.1 31 113-143 133-166 (225)
233 1qb7_A APRT, adenine phosphori 33.0 55 0.0019 23.3 4.2 32 112-143 136-170 (236)
234 3ohp_A Hypoxanthine phosphorib 32.9 56 0.0019 22.1 4.1 32 113-144 90-124 (177)
235 3fbt_A Chorismate mutase and s 32.9 61 0.0021 23.9 4.5 34 113-147 121-154 (282)
236 3t4e_A Quinate/shikimate dehyd 32.9 69 0.0023 24.0 4.9 35 113-148 147-181 (312)
237 3pwz_A Shikimate dehydrogenase 32.5 73 0.0025 23.2 4.9 34 113-147 119-152 (272)
238 1p8a_A Protein tyrosine phosph 32.5 6.1 0.00021 26.1 -1.0 38 115-152 5-43 (146)
239 1v9s_A Uracil phosphoribosyltr 32.4 54 0.0018 23.1 4.0 31 114-144 123-156 (208)
240 1yzh_A TRNA (guanine-N(7)-)-me 32.4 1E+02 0.0034 20.9 5.4 44 101-144 136-179 (214)
241 3jyo_A Quinate/shikimate dehyd 32.3 74 0.0025 23.3 4.9 35 113-148 126-160 (283)
242 1fsg_A HGPRTASE, hypoxanthine- 32.3 56 0.0019 23.2 4.1 31 113-143 141-174 (233)
243 2b4a_A BH3024; flavodoxin-like 32.0 88 0.003 19.0 5.3 38 114-152 15-52 (138)
244 3o7m_A Hypoxanthine phosphorib 32.0 59 0.002 22.3 4.1 31 113-143 93-126 (186)
245 2hmt_A YUAA protein; RCK, KTN, 32.0 65 0.0022 19.9 4.1 30 116-147 8-37 (144)
246 1jf8_A Arsenate reductase; ptp 31.9 61 0.0021 20.7 3.9 36 115-150 4-40 (131)
247 2wul_A Glutaredoxin related pr 31.9 98 0.0033 19.5 5.2 37 100-140 9-51 (118)
248 3oiy_A Reverse gyrase helicase 31.7 48 0.0016 25.2 3.9 34 114-148 252-286 (414)
249 1w30_A PYRR bifunctional prote 31.7 57 0.0019 22.5 4.0 31 113-143 111-145 (201)
250 3s5j_B Ribose-phosphate pyroph 31.7 61 0.0021 24.5 4.4 33 113-145 212-247 (326)
251 3eod_A Protein HNR; response r 31.5 86 0.0029 18.8 5.2 24 116-139 9-32 (130)
252 3dah_A Ribose-phosphate pyroph 31.4 68 0.0023 24.2 4.6 33 113-145 215-250 (319)
253 2wja_A Putative acid phosphata 31.4 37 0.0013 22.9 2.9 36 115-151 27-63 (168)
254 3h5i_A Response regulator/sens 31.2 93 0.0032 19.1 4.9 24 116-139 7-30 (140)
255 3i42_A Response regulator rece 31.1 81 0.0028 18.8 4.4 7 133-139 42-48 (127)
256 1d1q_A Tyrosine phosphatase (E 31.1 17 0.00059 24.3 1.2 38 115-152 8-52 (161)
257 3rui_A Ubiquitin-like modifier 31.1 79 0.0027 24.1 4.9 35 114-149 34-68 (340)
258 1va0_A Uroporphyrin-III C-meth 31.0 1.4E+02 0.0047 20.9 8.2 106 48-159 12-122 (239)
259 2z83_A Helicase/nucleoside tri 30.9 61 0.0021 25.4 4.5 33 114-147 190-222 (459)
260 3don_A Shikimate dehydrogenase 30.8 53 0.0018 24.1 3.9 32 114-146 117-148 (277)
261 2jlq_A Serine protease subunit 30.7 55 0.0019 25.6 4.2 37 114-151 188-224 (451)
262 2jae_A L-amino acid oxidase; o 30.7 79 0.0027 24.6 5.1 34 111-146 8-41 (489)
263 2ps1_A Orotate phosphoribosylt 30.6 64 0.0022 22.7 4.2 31 113-143 124-157 (226)
264 2a9f_A Putative malic enzyme ( 30.6 63 0.0022 25.3 4.4 32 114-146 188-219 (398)
265 1yn9_A BVP, polynucleotide 5'- 30.4 54 0.0019 21.6 3.6 27 113-139 112-141 (169)
266 1z7g_A HGPRT, HGPRTASE, hypoxa 30.2 58 0.002 22.8 3.9 31 113-143 125-158 (217)
267 3grc_A Sensor protein, kinase; 30.0 96 0.0033 18.9 5.2 24 116-139 8-31 (140)
268 4atq_A 4-aminobutyrate transam 29.9 51 0.0018 26.0 3.9 45 108-152 117-164 (456)
269 2ehj_A Uracil phosphoribosyltr 29.8 59 0.002 22.9 3.8 31 114-144 123-156 (208)
270 3fmp_B ATP-dependent RNA helic 29.4 11 0.00039 29.5 0.0 36 114-150 333-368 (479)
271 3tnl_A Shikimate dehydrogenase 29.3 84 0.0029 23.5 4.8 34 113-147 153-186 (315)
272 3gl9_A Response regulator; bet 29.2 95 0.0032 18.5 5.1 6 134-139 22-27 (122)
273 3mwy_W Chromo domain-containin 29.2 77 0.0026 26.8 5.1 38 112-150 570-607 (800)
274 3o8q_A Shikimate 5-dehydrogena 29.2 78 0.0027 23.2 4.6 34 113-147 125-158 (281)
275 2fek_A Low molecular weight pr 29.2 44 0.0015 22.5 3.0 35 115-150 23-58 (167)
276 3mb5_A SAM-dependent methyltra 29.2 41 0.0014 23.6 3.0 47 101-147 174-222 (255)
277 2wv9_A Flavivirin protease NS2 28.7 58 0.002 27.2 4.1 35 113-148 409-443 (673)
278 4ao9_A Beta-phenylalanine amin 28.3 52 0.0018 26.0 3.7 50 103-153 131-183 (454)
279 2hma_A Probable tRNA (5-methyl 28.3 62 0.0021 24.9 4.0 27 114-140 9-35 (376)
280 2egg_A AROE, shikimate 5-dehyd 28.0 84 0.0029 23.1 4.6 34 113-147 140-173 (297)
281 4e3q_A Pyruvate transaminase; 27.5 66 0.0023 25.5 4.1 47 106-152 119-173 (473)
282 1wy5_A TILS, hypothetical UPF0 27.5 1E+02 0.0035 22.7 5.1 39 111-149 21-65 (317)
283 3fho_A ATP-dependent RNA helic 27.4 24 0.00083 28.0 1.6 37 113-150 356-392 (508)
284 3lrt_A Ribose-phosphate pyroph 27.4 84 0.0029 23.2 4.4 32 113-144 202-236 (286)
285 2whx_A Serine protease/ntpase/ 27.4 72 0.0025 26.3 4.4 34 114-148 355-388 (618)
286 3gt7_A Sensor protein; structu 27.3 1.2E+02 0.004 19.0 4.8 24 116-139 9-32 (154)
287 1ns5_A Hypothetical protein YB 27.3 77 0.0026 21.2 3.9 44 106-151 59-107 (155)
288 3lte_A Response regulator; str 27.2 1E+02 0.0036 18.4 5.0 23 117-139 9-31 (132)
289 2der_A TRNA-specific 2-thiouri 27.2 52 0.0018 25.4 3.4 27 114-140 17-43 (380)
290 2ji4_A Phosphoribosyl pyrophos 27.1 78 0.0027 24.4 4.4 32 113-144 271-305 (379)
291 2vdc_G Glutamate synthase [NAD 27.1 90 0.0031 24.5 4.9 33 113-146 263-295 (456)
292 1fuu_A Yeast initiation factor 26.9 13 0.00046 27.8 0.0 36 114-150 259-294 (394)
293 2yvq_A Carbamoyl-phosphate syn 26.8 1.3E+02 0.0045 19.4 5.3 32 127-160 39-71 (143)
294 1jdq_A TM006 protein, hypothet 26.8 1.1E+02 0.0038 18.5 5.7 38 103-140 42-79 (98)
295 1q1r_A Putidaredoxin reductase 26.7 2E+02 0.0069 22.0 6.8 42 103-146 138-179 (431)
296 3ef6_A Toluene 1,2-dioxygenase 26.6 2E+02 0.007 21.7 6.8 43 102-146 131-173 (410)
297 2ivd_A PPO, PPOX, protoporphyr 26.4 76 0.0026 24.5 4.3 31 114-146 16-46 (478)
298 3t38_A Arsenate reductase; low 26.3 66 0.0023 22.7 3.6 37 113-149 80-117 (213)
299 1k68_A Phytochrome response re 26.3 1.1E+02 0.0038 18.3 5.2 11 129-139 17-27 (140)
300 3q2o_A Phosphoribosylaminoimid 26.1 92 0.0032 23.5 4.7 32 113-146 13-44 (389)
301 1o54_A SAM-dependent O-methylt 26.0 16 0.00053 26.4 0.2 46 102-147 194-239 (277)
302 2xij_A Methylmalonyl-COA mutas 26.0 1.4E+02 0.0049 25.4 6.0 35 114-148 655-693 (762)
303 3cg4_A Response regulator rece 26.0 1.2E+02 0.0039 18.5 5.3 33 115-148 8-40 (142)
304 1zud_1 Adenylyltransferase THI 25.8 83 0.0028 22.5 4.1 34 114-148 28-61 (251)
305 2pln_A HP1043, response regula 25.8 1.2E+02 0.0039 18.4 5.2 36 114-150 18-53 (137)
306 2ivy_A Hypothetical protein SS 25.7 78 0.0027 19.4 3.4 27 117-143 6-33 (101)
307 3lvj_C Sulfurtransferase TUSA; 25.7 1E+02 0.0035 17.8 5.5 38 103-140 26-63 (82)
308 1pdo_A Mannose permease; phosp 25.6 1.3E+02 0.0046 19.1 6.0 44 103-147 47-91 (135)
309 1iuk_A Hypothetical protein TT 25.6 1.4E+02 0.0047 19.2 5.9 42 102-147 4-48 (140)
310 3dmp_A Uracil phosphoribosyltr 25.5 1.1E+02 0.0036 21.7 4.5 32 114-145 129-165 (217)
311 1req_A Methylmalonyl-COA mutas 25.4 1.9E+02 0.0064 24.6 6.6 35 114-148 647-685 (727)
312 3dfz_A SIRC, precorrin-2 dehyd 25.4 91 0.0031 22.1 4.2 49 77-146 13-61 (223)
313 1u7z_A Coenzyme A biosynthesis 25.3 1.3E+02 0.0043 21.4 4.9 24 123-147 33-56 (226)
314 1y8q_A Ubiquitin-like 1 activa 25.2 76 0.0026 24.0 4.0 34 114-148 36-69 (346)
315 3fpn_A Geobacillus stearotherm 25.2 1.3E+02 0.0046 19.0 4.8 45 101-147 6-55 (119)
316 2e1m_A L-glutamate oxidase; L- 25.2 1.1E+02 0.0039 23.3 5.0 32 114-147 44-75 (376)
317 4id9_A Short-chain dehydrogena 25.1 85 0.0029 22.9 4.2 32 113-145 18-49 (347)
318 1z3i_X Similar to RAD54-like; 25.1 77 0.0026 26.1 4.3 36 113-149 415-450 (644)
319 2dvm_A Malic enzyme, 439AA lon 25.1 1E+02 0.0035 24.3 4.8 33 113-146 185-219 (439)
320 3orq_A N5-carboxyaminoimidazol 25.0 1E+02 0.0035 23.3 4.7 33 113-147 11-43 (377)
321 3f6p_A Transcriptional regulat 25.0 1.1E+02 0.0039 18.0 5.1 6 134-139 42-47 (120)
322 1cbf_A Cobalt-precorrin-4 tran 24.7 2E+02 0.0069 20.8 8.1 104 48-159 32-144 (285)
323 2bcg_G Secretory pathway GDP d 24.5 88 0.003 24.3 4.4 31 114-146 11-41 (453)
324 2qxy_A Response regulator; reg 24.4 1.3E+02 0.0043 18.3 4.6 23 117-139 7-29 (142)
325 3hz7_A Uncharacterized protein 24.3 1.2E+02 0.004 17.9 4.1 37 104-140 18-55 (87)
326 2g3w_A YAEQ protein, hypotheti 24.2 1.8E+02 0.0061 20.1 5.8 44 99-145 87-132 (182)
327 3phh_A Shikimate dehydrogenase 24.2 1.2E+02 0.004 22.2 4.7 31 114-146 118-148 (269)
328 2r25_B Osmosensing histidine p 24.1 1.3E+02 0.0043 18.3 5.4 13 118-130 30-42 (133)
329 3hdv_A Response regulator; PSI 24.1 1.2E+02 0.0043 18.2 5.4 34 115-149 8-41 (136)
330 1d5r_A Phosphoinositide phosph 24.0 82 0.0028 23.5 3.9 71 64-138 58-137 (324)
331 4e4t_A Phosphoribosylaminoimid 24.0 1.1E+02 0.0037 23.7 4.8 34 111-146 32-65 (419)
332 3awd_A GOX2181, putative polyo 24.0 1.1E+02 0.0039 21.2 4.6 31 114-145 13-43 (260)
333 3heb_A Response regulator rece 23.8 1.4E+02 0.0046 18.5 5.2 24 116-139 6-29 (152)
334 2eyq_A TRCF, transcription-rep 23.8 84 0.0029 28.1 4.4 46 104-150 802-849 (1151)
335 2dri_A D-ribose-binding protei 23.7 64 0.0022 22.6 3.2 30 116-145 183-212 (271)
336 1jw9_B Molybdopterin biosynthe 23.7 88 0.003 22.3 3.9 35 114-149 31-65 (249)
337 2rjn_A Response regulator rece 23.7 1.4E+02 0.0047 18.5 4.9 24 116-139 9-32 (154)
338 2wsb_A Galactitol dehydrogenas 23.6 1.2E+02 0.004 21.0 4.6 32 114-146 11-42 (254)
339 2b49_A Protein tyrosine phosph 23.6 92 0.0032 22.8 4.1 17 112-128 207-224 (287)
340 2gkg_A Response regulator homo 23.6 1.2E+02 0.004 17.8 4.5 8 132-139 23-30 (127)
341 2qr3_A Two-component system re 23.6 1.3E+02 0.0044 18.1 4.5 13 132-145 41-53 (140)
342 4gcm_A TRXR, thioredoxin reduc 23.5 93 0.0032 22.3 4.1 33 113-147 144-176 (312)
343 3qw4_B UMP synthase; N-termina 23.5 86 0.0029 24.8 4.1 50 111-160 362-420 (453)
344 3mmj_A MYO-inositol hexaphosph 23.4 98 0.0033 23.3 4.2 26 99-124 195-223 (314)
345 3hv2_A Response regulator/HD d 23.3 1.4E+02 0.0048 18.5 4.6 10 130-139 30-39 (153)
346 2pk3_A GDP-6-deoxy-D-LYXO-4-he 23.2 1E+02 0.0035 22.1 4.3 33 112-145 10-42 (321)
347 1rsg_A FMS1 protein; FAD bindi 23.1 1.1E+02 0.0038 24.1 4.7 31 115-146 9-39 (516)
348 3l49_A ABC sugar (ribose) tran 23.0 1.6E+02 0.0055 20.6 5.3 31 115-145 191-221 (291)
349 1z63_A Helicase of the SNF2/RA 22.9 97 0.0033 24.1 4.3 38 112-150 339-377 (500)
350 1bd3_D Uprtase, uracil phospho 22.9 87 0.003 22.6 3.7 31 114-144 156-191 (243)
351 1y1l_A Arsenate reductase (ARS 22.7 88 0.003 19.6 3.4 22 117-138 2-24 (124)
352 2gn4_A FLAA1 protein, UDP-GLCN 22.7 1E+02 0.0034 22.9 4.2 33 114-146 21-54 (344)
353 3f41_A Phytase; tandem repeat, 22.7 65 0.0022 26.8 3.3 121 19-140 419-560 (629)
354 3zyw_A Glutaredoxin-3; metal b 22.6 97 0.0033 19.0 3.5 28 113-140 14-47 (111)
355 1oi7_A Succinyl-COA synthetase 22.6 1.1E+02 0.0037 22.5 4.3 35 111-145 4-38 (288)
356 1pp7_U 39 kDa initiator bindin 22.5 9.3 0.00032 24.7 -1.4 27 131-157 84-110 (131)
357 3nkl_A UDP-D-quinovosamine 4-d 22.5 1.1E+02 0.0037 19.1 3.9 32 114-146 4-36 (141)
358 3gx8_A Monothiol glutaredoxin- 22.3 71 0.0024 20.0 2.8 27 114-140 15-47 (121)
359 4gsl_A Ubiquitin-like modifier 22.1 1.3E+02 0.0044 25.0 4.9 35 114-149 326-360 (615)
360 1byk_A Protein (trehalose oper 22.1 1.8E+02 0.0062 19.8 5.3 31 115-145 172-202 (255)
361 1o5i_A 3-oxoacyl-(acyl carrier 22.0 1.4E+02 0.0047 20.9 4.7 32 113-145 18-49 (249)
362 2bc0_A NADH oxidase; flavoprot 22.0 2.6E+02 0.0089 21.8 6.7 33 112-146 192-224 (490)
363 3dmq_A RNA polymerase-associat 22.0 90 0.0031 27.2 4.2 36 113-149 502-538 (968)
364 2pwy_A TRNA (adenine-N(1)-)-me 21.9 39 0.0013 23.6 1.7 45 102-146 179-223 (258)
365 3r4v_A Putative uncharacterize 21.8 1.7E+02 0.0057 22.1 5.0 42 106-147 73-119 (315)
366 1pav_A Hypothetical protein TA 21.8 88 0.003 17.8 3.0 38 103-140 22-59 (78)
367 1zat_A L,D-transpeptidase; L,D 21.7 67 0.0023 22.9 2.9 19 102-120 232-250 (250)
368 1xg5_A ARPG836; short chain de 21.7 1.4E+02 0.0047 21.2 4.7 31 114-145 32-62 (279)
369 1sur_A PAPS reductase; assimil 21.7 1.7E+02 0.0059 19.9 5.1 24 116-139 46-69 (215)
370 3klj_A NAD(FAD)-dependent dehy 21.7 83 0.0028 23.9 3.6 32 113-146 145-176 (385)
371 2ayx_A Sensor kinase protein R 21.6 1.7E+02 0.0059 20.4 5.2 38 115-153 130-167 (254)
372 4grz_A Tyrosine-protein phosph 21.6 1.3E+02 0.0043 22.0 4.5 18 111-128 203-221 (288)
373 3ruf_A WBGU; rossmann fold, UD 21.4 1.3E+02 0.0043 22.0 4.5 33 113-146 24-56 (351)
374 4hjh_A Phosphomannomutase; str 21.3 1.3E+02 0.0045 23.8 4.8 42 103-145 163-208 (481)
375 1yb2_A Hypothetical protein TA 21.3 17 0.00057 26.3 -0.4 46 101-146 191-236 (275)
376 1fpr_A Protein-tyrosine phosph 21.2 1.2E+02 0.0042 22.0 4.3 18 111-128 201-219 (284)
377 2vvm_A Monoamine oxidase N; FA 21.2 1.2E+02 0.0041 23.5 4.6 30 115-146 40-69 (495)
378 3l6u_A ABC-type sugar transpor 21.1 1E+02 0.0035 21.7 3.9 30 116-145 196-225 (293)
379 2v3a_A Rubredoxin reductase; a 21.1 2.4E+02 0.0081 21.0 6.1 35 110-146 141-175 (384)
380 2fn9_A Ribose ABC transporter, 21.1 1E+02 0.0035 21.7 3.9 30 116-145 192-221 (290)
381 4dad_A Putative pilus assembly 20.9 1.5E+02 0.005 18.1 4.3 37 114-151 20-57 (146)
382 1l3i_A Precorrin-6Y methyltran 20.9 1.1E+02 0.0037 19.8 3.7 42 101-143 114-155 (192)
383 3ozf_A Hypoxanthine-guanine-xa 20.8 1E+02 0.0036 22.3 3.8 31 113-143 155-188 (250)
384 3u62_A Shikimate dehydrogenase 20.8 1.3E+02 0.0046 21.5 4.4 31 116-147 110-140 (253)
385 1y80_A Predicted cobalamin bin 20.7 1.6E+02 0.0054 20.1 4.7 31 114-145 88-122 (210)
386 1k66_A Phytochrome response re 20.7 1.5E+02 0.0052 17.9 5.3 24 116-139 8-31 (149)
387 2c46_A MRNA capping enzyme; ph 20.7 1.9E+02 0.0066 20.5 5.2 84 52-139 67-169 (241)
388 2z5l_A Tylkr1, tylactone synth 20.7 1.4E+02 0.0049 23.8 4.9 35 111-145 256-290 (511)
389 1tmy_A CHEY protein, TMY; chem 20.6 1.4E+02 0.0047 17.4 5.0 10 116-125 28-37 (120)
390 1lu9_A Methylene tetrahydromet 20.6 1.4E+02 0.0047 21.5 4.5 33 113-146 118-150 (287)
391 2zay_A Response regulator rece 20.6 1.2E+02 0.0043 18.5 3.9 11 129-139 23-33 (147)
392 2i2x_B MTAC, methyltransferase 20.5 1.7E+02 0.0059 20.9 5.0 31 114-145 123-157 (258)
393 3kht_A Response regulator; PSI 20.5 1.6E+02 0.0053 18.0 4.8 23 117-139 8-30 (144)
394 3sbx_A Putative uncharacterize 20.4 1.5E+02 0.0051 20.4 4.4 26 115-140 14-46 (189)
395 3tbh_A O-acetyl serine sulfhyd 20.4 1.4E+02 0.0046 22.3 4.5 37 112-148 69-105 (334)
396 2vdc_G Glutamate synthase [NAD 20.4 1.3E+02 0.0044 23.5 4.6 31 114-146 122-152 (456)
397 2bgk_A Rhizome secoisolaricire 20.2 1.5E+02 0.0053 20.7 4.7 31 114-145 16-46 (278)
398 1yb1_A 17-beta-hydroxysteroid 20.2 1.5E+02 0.0051 20.9 4.6 31 114-145 31-61 (272)
399 2ykg_A Probable ATP-dependent 20.1 1.4E+02 0.0047 24.4 4.8 34 113-147 397-434 (696)
400 2fca_A TRNA (guanine-N(7)-)-me 20.1 1.7E+02 0.0059 19.8 4.8 43 101-143 133-175 (213)
401 3ic5_A Putative saccharopine d 20.0 1.4E+02 0.0049 17.4 4.1 31 115-146 6-36 (118)
402 4a5l_A Thioredoxin reductase; 20.0 1.1E+02 0.0038 21.8 3.9 32 113-146 151-182 (314)
403 3hzh_A Chemotaxis response reg 20.0 1.7E+02 0.0058 18.3 4.7 25 116-140 38-62 (157)
404 3ghd_A A cystathionine beta-sy 20.0 1.3E+02 0.0043 16.7 3.8 26 122-147 6-31 (70)
405 1y1p_A ARII, aldehyde reductas 20.0 1.4E+02 0.0049 21.4 4.6 32 113-145 10-41 (342)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.97 E-value=1.4e-30 Score=170.34 Aligned_cols=99 Identities=25% Similarity=0.402 Sum_probs=87.3
Q ss_pred cccCHHHHHHHHhC--CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhH
Q 031359 50 TSVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 127 (161)
Q Consensus 50 ~~i~~~~~~~~~~~--~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a 127 (161)
..|+++++++++.+ +++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.||
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivv~C~~G~rS 69 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCccc------------chhhhhhhhcCCCeEEEECCCCHHH
Confidence 36899999887754 388999999999999999999999993 3444556788999999999999999
Q ss_pred HHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 128 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 128 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
..++..|++.||+++ .|.||+.+|.++|+|+++
T Consensus 70 ~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 70 AKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHcCCCEE-EecChHHHHHHCCCccee
Confidence 999999999999755 699999999999999985
No 2
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.97 E-value=3.4e-30 Score=174.99 Aligned_cols=115 Identities=68% Similarity=1.123 Sum_probs=100.5
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchh
Q 031359 47 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 126 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~ 126 (161)
.....++++++.++++++.+|||||++.||..||||||+|||+..+...+...+.+++.+....++++++|||||.+|.+
T Consensus 15 ~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~r 94 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGR 94 (129)
T ss_dssp CCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCSH
T ss_pred CCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCcH
Confidence 44568899999998887789999999999999999999999985544444445567777777778899999999999999
Q ss_pred HHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 127 SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 127 a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
|..++..|+++||++|++|+||+.+|..+|+|+++
T Consensus 95 s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (129)
T 1tq1_A 95 SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129 (129)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred HHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999874
No 3
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.96 E-value=3.8e-29 Score=164.88 Aligned_cols=99 Identities=29% Similarity=0.433 Sum_probs=91.4
Q ss_pred CcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHH
Q 031359 49 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 128 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~ 128 (161)
...++++++.+++++ ++|||||++.||..||||||+|+|+ ..+......++++++||+||.+|.+|.
T Consensus 3 ~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyC~~G~rs~ 69 (108)
T 3gk5_A 3 YRSINAADLYENIKA-YTVLDVREPFELIFGSIANSINIPI------------SELREKWKILERDKKYAVICAHGNRSA 69 (108)
T ss_dssp CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTCEECCH------------HHHHHHGGGSCTTSCEEEECSSSHHHH
T ss_pred ccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCCEEcCH------------HHHHHHHHhCCCCCeEEEEcCCCcHHH
Confidence 356899999998877 9999999999999999999999999 567777788899999999999999999
Q ss_pred HHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 129 MAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 129 ~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
.++..|+++|| +|++|+||+.+|.++|+|+++
T Consensus 70 ~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 70 AAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 99999999999 999999999999999999874
No 4
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.96 E-value=1.6e-29 Score=164.40 Aligned_cols=97 Identities=24% Similarity=0.389 Sum_probs=86.6
Q ss_pred cccCHHHHHHHHh--CCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhH
Q 031359 50 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 127 (161)
Q Consensus 50 ~~i~~~~~~~~~~--~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a 127 (161)
..++++++.++++ ++++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.+|
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivvyC~~g~rs 69 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMN------------SIPDNLNYFNDNETYYIICKAGGRS 69 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGSCTTSEEEEECSSSHHH
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHHhCCCCCcEEEEcCCCchH
Confidence 3578999999874 4589999999999999999999999993 3444556688899999999999999
Q ss_pred HHHHHHHHHCCCcceeEecccHHHHhhCCCCC
Q 031359 128 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 128 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 159 (161)
..++..|++.|| +|++|+||+.+|.++|+||
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 70 AQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred HHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 999999999999 9999999999999999986
No 5
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.96 E-value=1.7e-29 Score=165.16 Aligned_cols=99 Identities=25% Similarity=0.387 Sum_probs=87.9
Q ss_pred cccCHHHHHHHHh--CCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhH
Q 031359 50 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 127 (161)
Q Consensus 50 ~~i~~~~~~~~~~--~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a 127 (161)
..++++++.+++. ++++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.+|
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~yC~~g~rs 69 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhCCCCCeEEEECCCChHH
Confidence 3578999998873 4589999999999999999999999994 3444556678899999999999999
Q ss_pred HHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 128 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 128 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
..++..|+.+|| +|++|+||+.+|.++|+|+++
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 70 AKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 999999999999 899999999999999999974
No 6
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.7e-28 Score=165.45 Aligned_cols=113 Identities=23% Similarity=0.305 Sum_probs=95.3
Q ss_pred CCCcccCHHHHHHHHh---CCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEe
Q 031359 47 GVPTSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGC 121 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~---~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c 121 (161)
.....++++++.++++ ++.+|||||++.||..||||||+|+|+..+ ......+++.+...+. .++++++|||||
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC 98 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSH-PDAFALDPLEFEKQIGIPKPDSAKELIFYC 98 (139)
T ss_dssp CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTC-TTGGGSCHHHHHHHHSSCCCCTTSEEEEEC
T ss_pred CCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHh-hhhccCCHHHHHHHHhccCCCCCCeEEEEC
Confidence 3456899999999885 458899999999999999999999999543 3333344555665554 357889999999
Q ss_pred CCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 122 QSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 122 ~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
.+|.+|..++..|+++||++|++|+||+.+|.++|+|+.
T Consensus 99 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 137 (139)
T 3d1p_A 99 ASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKL 137 (139)
T ss_dssp SSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGC
T ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999985
No 7
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.95 E-value=3.2e-28 Score=160.34 Aligned_cols=99 Identities=30% Similarity=0.500 Sum_probs=88.9
Q ss_pred CcccCHHHHHHHHhC-CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhH
Q 031359 49 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 127 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a 127 (161)
...++++++.+++++ +.+|||||++.||..||||||+|+|+ ..+......++++++||+||.+|.+|
T Consensus 4 ~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyc~~g~rs 71 (108)
T 1gmx_A 4 FECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTN------------DTLGAFMRDNDFDTPVMVMCYHGNSS 71 (108)
T ss_dssp CEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCH------------HHHHHHHHHSCTTSCEEEECSSSSHH
T ss_pred ccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCH------------HHHHHHHHhcCCCCCEEEEcCCCchH
Confidence 356899999988865 48999999999999999999999998 44555666688999999999999999
Q ss_pred HHHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 128 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 128 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
..++..|++.||++|++|+||+.+|.++ +|++
T Consensus 72 ~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~ 103 (108)
T 1gmx_A 72 KGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAE 103 (108)
T ss_dssp HHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGG
T ss_pred HHHHHHHHHcCCceEEEecCCHHHHHHh-CCcc
Confidence 9999999999999999999999999998 8876
No 8
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.95 E-value=2.7e-28 Score=160.24 Aligned_cols=94 Identities=31% Similarity=0.533 Sum_probs=78.5
Q ss_pred HHHHHh---CCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHH
Q 031359 57 AHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATD 133 (161)
Q Consensus 57 ~~~~~~---~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~ 133 (161)
++++++ ++++|||||++.||..||||||+|+|+. ++.......++++++|||||.+|.+|..++..
T Consensus 3 l~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~~ 71 (106)
T 3hix_A 3 LKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQAVNL 71 (106)
T ss_dssp ----------CCEEEECSCHHHHHTCEETTCEECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHHHHH
T ss_pred HHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHHHHH
Confidence 444544 3489999999999999999999999994 33344456788899999999999999999999
Q ss_pred HHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 134 LLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 134 L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
|+.+||++|++|+||+.+|.++|+|+++
T Consensus 72 L~~~G~~~v~~l~GG~~~W~~~g~~~~~ 99 (106)
T 3hix_A 72 LRSAGFEHVSELKGGLAAWKAIGGPTEL 99 (106)
T ss_dssp HHHTTCSCEEECTTHHHHHHHTTCCEEE
T ss_pred HHHcCCcCEEEecCCHHHHHHCCCCCCC
Confidence 9999999999999999999999999863
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.95 E-value=7.3e-28 Score=165.82 Aligned_cols=98 Identities=31% Similarity=0.514 Sum_probs=87.2
Q ss_pred cCHHHHHHHHhC---CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHH
Q 031359 52 VPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 128 (161)
Q Consensus 52 i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~ 128 (161)
|++++++++++. +++|||||++.||..||||||+|+|+. .+.......++++++|||||.+|.+|.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~rs~ 70 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTS 70 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGG-----------GHHHHHHTTSCTTSEEEEECSSHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHH-----------HHHHHHHhcCCCCCeEEEEECCChHHH
Confidence 788899888863 478999999999999999999999994 333344457889999999999999999
Q ss_pred HHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 129 MAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 129 ~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
.+++.|+.+||++|++|+||+.+|.++|+|++
T Consensus 71 ~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 102 (141)
T 3ilm_A 71 QAVNLLRSAGFEHVSELKGGLAAWKAIGGPTE 102 (141)
T ss_dssp HHHHHHHHTTCCSEEECTTHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCCEEEecCHHHHHHHCCCCcc
Confidence 99999999999999999999999999999985
No 10
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.95 E-value=2.7e-27 Score=162.29 Aligned_cols=103 Identities=27% Similarity=0.459 Sum_probs=88.0
Q ss_pred CCCcccCHHHHHHHHh--C-CCEEEEcCChhhHhc-CCCCCcEEeccccccCCCCCCCHHHHHHHH--------hcCCCC
Q 031359 47 GVPTSVPVRVAHELLQ--A-GHRYLDVRTPEEFSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVS--------TRFRKH 114 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~--~-~~~liDvR~~~e~~~-ghIpgA~nip~~~~~~~~~~~~~~~~~~~~--------~~l~~~ 114 (161)
.....++++++.++++ . +++|||||++.||.. ||||||+|+|+.. +.... ..++++
T Consensus 19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~------------l~~~~~~~~~~~~~~~~~~ 86 (139)
T 2hhg_A 19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGM------------LEFWIDPQSPYAKPIFQED 86 (139)
T ss_dssp TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGG------------HHHHHCTTSTTCCGGGGSS
T ss_pred HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHH------------HHHhcCccchhhhccCCCC
Confidence 3446789999999887 3 488999999999999 9999999999842 22211 235788
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
++|||||.+|.+|..+++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus 87 ~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 133 (139)
T 2hhg_A 87 KKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEA 133 (139)
T ss_dssp SEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC-
T ss_pred CeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeec
Confidence 99999999999999999999999999999999999999999999873
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.94 E-value=2.3e-27 Score=162.60 Aligned_cols=103 Identities=24% Similarity=0.385 Sum_probs=89.3
Q ss_pred CCcccCHHHHHHHHh-C-CCEEEEcCChhhHhc-CC--CCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeC
Q 031359 48 VPTSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GH--ATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ 122 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~-~-~~~liDvR~~~e~~~-gh--IpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~ 122 (161)
....++++++.++++ + +++|||||++.||.. || ||||+|+|+..+ .. ...+..++++++|||||.
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l---------~~-~~~~~~l~~~~~ivvyC~ 90 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKL---------EP-LLAKSGLDPEKPVVVFCK 90 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTS---------HH-HHHHHCCCTTSCEEEECC
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHh---------hh-HHhhccCCCCCeEEEEcC
Confidence 345789999999886 4 489999999999999 99 999999998421 11 113456888999999999
Q ss_pred CchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 123 SGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 123 ~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
+|.+|..++..|+..||++|++|+||+.+|.++|+|++
T Consensus 91 ~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (137)
T 1qxn_A 91 TAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSL 128 (137)
T ss_dssp SSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEE
T ss_pred CCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcc
Confidence 99999999999999999999999999999999999986
No 12
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.94 E-value=5.4e-27 Score=158.10 Aligned_cols=100 Identities=24% Similarity=0.287 Sum_probs=89.3
Q ss_pred CcccCHHHHHHHHhC---CCEEEEcCChhhH-hcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCc
Q 031359 49 PTSVPVRVAHELLQA---GHRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG 124 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~---~~~liDvR~~~e~-~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g 124 (161)
...|+++++.++++. +++|||||++.|| ..||||||+|||+ ..+......++++++|||||.+|
T Consensus 14 ~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~------------~~l~~~~~~l~~~~~ivvyC~~g 81 (124)
T 3flh_A 14 SLYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPA------------KDLATRIGELDPAKTYVVYDWTG 81 (124)
T ss_dssp TTEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCH------------HHHHHHGGGSCTTSEEEEECSSS
T ss_pred cceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCH------------HHHHHHHhcCCCCCeEEEEeCCC
Confidence 346899999888764 3789999999998 9999999999999 55667777899999999999999
Q ss_pred hh--HHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 125 KR--SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 125 ~~--a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
.+ |..++..|++.||+ |++|+||+.+|..+|+|+.+
T Consensus 82 ~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~ 119 (124)
T 3flh_A 82 GTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEH 119 (124)
T ss_dssp SCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC
T ss_pred CchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCc
Confidence 98 89999999999996 99999999999999999764
No 13
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.94 E-value=1.5e-27 Score=153.35 Aligned_cols=92 Identities=24% Similarity=0.304 Sum_probs=76.3
Q ss_pred ccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHH
Q 031359 51 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMA 130 (161)
Q Consensus 51 ~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~ 130 (161)
.++++++.++++++.+|||||++.||..||||||+|+|+. .+......+++ ++||+||.+|.+|..+
T Consensus 3 ~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gAi~ip~~------------~l~~~~~~l~~-~~ivvyC~~g~rs~~a 69 (94)
T 1wv9_A 3 KVRPEELPALLEEGVLVVDVRPADRRSTPLPFAAEWVPLE------------KIQKGEHGLPR-RPLLLVCEKGLLSQVA 69 (94)
T ss_dssp EECGGGHHHHHHTTCEEEECCCC--CCSCCSSCCEECCHH------------HHTTTCCCCCS-SCEEEECSSSHHHHHH
T ss_pred cCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCCEECCHH------------HHHHHHHhCCC-CCEEEEcCCCChHHHH
Confidence 5778888888877899999999999999999999999983 33334455778 9999999999999999
Q ss_pred HHHHHHCCCcceeEecccHHHHhhCC
Q 031359 131 ATDLLNAGFAGITDIAGGFAAWRQNG 156 (161)
Q Consensus 131 ~~~L~~~G~~~v~~l~GG~~~W~~~g 156 (161)
+..|+..||+ |++|+||+.+|.++|
T Consensus 70 ~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 70 ALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHTCC-EEEETTGGGCC----
T ss_pred HHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 9999999998 999999999998875
No 14
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.94 E-value=2.4e-26 Score=174.28 Aligned_cols=139 Identities=21% Similarity=0.328 Sum_probs=102.3
Q ss_pred eeecccccccccccccccccccc----------cCCCcccCHHHHHHHHh-CCCEEEEcCChhhH-----------hcCC
Q 031359 23 IGFISSKILSFCPKASLRGNLEA----------VGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-----------SAGH 80 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~-~~~~liDvR~~~e~-----------~~gh 80 (161)
+..|+||+.+|..+..+...-.. ......++.+++.++++ ++.+|||||++.|| ..||
T Consensus 115 v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~gh 194 (280)
T 1urh_A 115 VSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGH 194 (280)
T ss_dssp EEEETTHHHHHHHTTCCCBBSCCCCCCCCCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSS
T ss_pred EEEecCCHHHHHHCCCcccCCCCCCCCCccccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCcc
Confidence 46789999999865422221100 01123588999988875 45899999999999 6899
Q ss_pred CCCcEEeccccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhh-CCC
Q 031359 81 ATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQ-NGL 157 (161)
Q Consensus 81 IpgA~nip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~-~g~ 157 (161)
||||+|||+..+...+.+.+.+.+...+. .++++++||+||.+|.+|..++..|+.+||++|++|+|||.+|.. .++
T Consensus 195 IpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~ 274 (280)
T 1urh_A 195 IPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADL 274 (280)
T ss_dssp CTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-------
T ss_pred CCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCC
Confidence 99999999976655455566677777666 467899999999999999999999999999999999999999987 599
Q ss_pred CCCC
Q 031359 158 PTEP 161 (161)
Q Consensus 158 p~~~ 161 (161)
|+++
T Consensus 275 Pv~~ 278 (280)
T 1urh_A 275 PVEP 278 (280)
T ss_dssp ----
T ss_pred Ccee
Confidence 9874
No 15
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.94 E-value=8.4e-27 Score=161.02 Aligned_cols=100 Identities=23% Similarity=0.352 Sum_probs=86.1
Q ss_pred cccCHHHHHHHHhCC---CEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCc--
Q 031359 50 TSVPVRVAHELLQAG---HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 124 (161)
Q Consensus 50 ~~i~~~~~~~~~~~~---~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g-- 124 (161)
..++++++.+++.++ ++|||||++.||..||||||+|+|+..+.. .....++++++|||||.+|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~-----------~~~~~l~~~~~ivvyC~~g~~ 84 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINE-----------DTTKRLSKEKVIITYCWGPAC 84 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCST-----------TTTTTCCTTSEEEEECSCTTC
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhH-----------HHHhhCCCCCeEEEEECCCCc
Confidence 357899999888653 789999999999999999999999953211 1334578899999999998
Q ss_pred hhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 125 KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 125 ~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
.+|..++..|+.+|| +|++|+||+.+|.++|+|+++
T Consensus 85 ~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~ 120 (144)
T 3nhv_A 85 NGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEG 120 (144)
T ss_dssp CHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBS
T ss_pred cHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccC
Confidence 799999999999999 699999999999999999864
No 16
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.94 E-value=3.1e-26 Score=172.87 Aligned_cols=138 Identities=17% Similarity=0.285 Sum_probs=106.4
Q ss_pred eeecccccccccccccccccccc----------cCCCcccCHHHHHHHHhC-CCEEEEcCChhhHh--------cCCCCC
Q 031359 23 IGFISSKILSFCPKASLRGNLEA----------VGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFS--------AGHATG 83 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~~--------~ghIpg 83 (161)
+.+|+||+.+|..+..+...... ......++++++.+++++ +.+|||||++.||. .|||||
T Consensus 110 v~~L~GG~~~w~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpg 189 (271)
T 1e0c_A 110 YHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPG 189 (271)
T ss_dssp EEEETTHHHHHHHTTCCCBCCCCCCCCSCCCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTT
T ss_pred eEEecCCHHHHHHcCCCccCCCCCCCCCCccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCC
Confidence 34789999999866422221110 011235688999888765 48899999999999 999999
Q ss_pred cEEeccccccCC--CCCCCHHHHHHHHh--cCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhC-CCC
Q 031359 84 AINVPYMYRVGS--GMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQN-GLP 158 (161)
Q Consensus 84 A~nip~~~~~~~--~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~-g~p 158 (161)
|+|+|+..+... ..... +.+.+.+. .++++++||+||.+|.+|..++..|+.+||++|++|+|||.+|.++ |+|
T Consensus 190 A~~ip~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~p 268 (271)
T 1e0c_A 190 AVNFEWTAAMDPSRALRIR-TDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTP 268 (271)
T ss_dssp CEECCGGGGEEGGGTTEEC-TTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCC
T ss_pred ceeccHHHhCCCCCCCCCH-HHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCC
Confidence 999999654422 22222 44555555 5788999999999999999999999999999999999999999998 999
Q ss_pred CCC
Q 031359 159 TEP 161 (161)
Q Consensus 159 ~~~ 161 (161)
+++
T Consensus 269 v~~ 271 (271)
T 1e0c_A 269 VEL 271 (271)
T ss_dssp CBC
T ss_pred CcC
Confidence 975
No 17
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.93 E-value=8.2e-26 Score=174.46 Aligned_cols=138 Identities=20% Similarity=0.322 Sum_probs=111.5
Q ss_pred eeeccccccccccccccccc-cc--------c---cCCCcccCHHHHHHHHhCCCEEEEcCChhhHhc------------
Q 031359 23 IGFISSKILSFCPKASLRGN-LE--------A---VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA------------ 78 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~-~~--------~---~~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~------------ 78 (161)
+..|+||+.+|..+..+... .. . ......++.+++.++++++ +|||||++.||..
T Consensus 140 V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~ 218 (318)
T 3hzu_A 140 VRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEG 218 (318)
T ss_dssp EEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCCTTTBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCS
T ss_pred eEEccCCHHHHhhcCCCcccCCCCCCCCccccccCCCccccccHHHHHHhhcCC-eEEecCCHHHhcccccCcccccccc
Confidence 45789999999976432221 00 0 1112357889999988776 8999999999998
Q ss_pred ----CCCCCcEEecccccc-CCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHH-CCCcceeEecccHHHH
Q 031359 79 ----GHATGAINVPYMYRV-GSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLN-AGFAGITDIAGGFAAW 152 (161)
Q Consensus 79 ----ghIpgA~nip~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~-~G~~~v~~l~GG~~~W 152 (161)
||||||+|+|+..++ ..+.+.+.+.+.+.+..++++++||+||++|.+|..++..|++ +||++|++|+|||.+|
T Consensus 219 ~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W 298 (318)
T 3hzu_A 219 ALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEW 298 (318)
T ss_dssp CSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHH
T ss_pred CCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHH
Confidence 999999999996554 3455667777888877789999999999999999999999997 9999999999999999
Q ss_pred hh-CCCCCCC
Q 031359 153 RQ-NGLPTEP 161 (161)
Q Consensus 153 ~~-~g~p~~~ 161 (161)
.+ .|+|+++
T Consensus 299 ~~~~g~Pv~~ 308 (318)
T 3hzu_A 299 GNAVRVPIVA 308 (318)
T ss_dssp TTSTTCCCBC
T ss_pred hcCCCCCccc
Confidence 95 6999874
No 18
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.93 E-value=1.5e-25 Score=170.33 Aligned_cols=139 Identities=20% Similarity=0.334 Sum_probs=110.1
Q ss_pred eeeccccccccccccccccc-cc----------ccCCCcccCHHHHHHHHh----CCCEEEEcCChhhHh----------
Q 031359 23 IGFISSKILSFCPKASLRGN-LE----------AVGVPTSVPVRVAHELLQ----AGHRYLDVRTPEEFS---------- 77 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~-~~----------~~~~~~~i~~~~~~~~~~----~~~~liDvR~~~e~~---------- 77 (161)
+-+|+||+.+|..+..+... .. .......++++++.++++ .+..|||||++.||.
T Consensus 108 v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~ 187 (285)
T 1uar_A 108 VRLMNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYP 187 (285)
T ss_dssp EEEETTHHHHHHHHTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC-------
T ss_pred eEEecCCHHHHHHCCCcccCCCCcccCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeecccccccc
Confidence 34789999999765322211 00 011113589999998884 456799999999998
Q ss_pred ------cCCCCCcEEeccccccC-CCCCCCHHHHHHHHhc--CCCCCeEEEEeCCchhHHHHHHHHH-HCCCcceeEecc
Q 031359 78 ------AGHATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLL-NAGFAGITDIAG 147 (161)
Q Consensus 78 ------~ghIpgA~nip~~~~~~-~~~~~~~~~~~~~~~~--l~~~~~ivv~c~~g~~a~~~~~~L~-~~G~~~v~~l~G 147 (161)
.||||||+|+|+..+.. .+.+.+.+.+...+.. ++++++|||||.+|.+|..++..|+ .+||++|++|+|
T Consensus 188 ~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~G 267 (285)
T 1uar_A 188 QEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDG 267 (285)
T ss_dssp -CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESS
T ss_pred ccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCc
Confidence 89999999999865542 3456677778887776 7889999999999999999999999 999999999999
Q ss_pred cHHHHh-hCCCCCCC
Q 031359 148 GFAAWR-QNGLPTEP 161 (161)
Q Consensus 148 G~~~W~-~~g~p~~~ 161 (161)
||.+|. .+|+|+++
T Consensus 268 G~~~W~~~~g~pv~~ 282 (285)
T 1uar_A 268 SWTEWGNLVGVPIAK 282 (285)
T ss_dssp HHHHHTTSTTCCCBC
T ss_pred hHHHHhcCCCCCccc
Confidence 999998 78999874
No 19
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.93 E-value=2.1e-26 Score=152.11 Aligned_cols=87 Identities=18% Similarity=0.319 Sum_probs=76.5
Q ss_pred hCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEeCCchhHHHHHHHHHHCCC
Q 031359 62 QAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 62 ~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.++++|||||++.||..||||||+|+|+. .+..... .++++++||+||.+|.+|..++..|+.+||
T Consensus 14 ~~~~~liDvR~~~e~~~ghIpgAi~ip~~------------~l~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~ 81 (110)
T 2k0z_A 14 FNDFIVVDVRELDEYEELHLPNATLISVN------------DQEKLADFLSQHKDKKVLLHCRAGRRALDAAKSMHELGY 81 (110)
T ss_dssp GGGSEEEEEECHHHHHHSBCTTEEEEETT------------CHHHHHHHHHSCSSSCEEEECSSSHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhcccCCCCEEEEEeCCCchHHHHHHHHHHCCC
Confidence 45689999999999999999999999984 2223332 378899999999999999999999999999
Q ss_pred cceeEecccHHHHhhCCCCCCC
Q 031359 140 AGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 140 ~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
++ ++|+||+.+|.++|+|+++
T Consensus 82 ~~-~~l~GG~~~W~~~g~p~~~ 102 (110)
T 2k0z_A 82 TP-YYLEGNVYDFEKYGFRMVY 102 (110)
T ss_dssp CC-EEEESCGGGTTTTTCCCBC
T ss_pred CE-EEecCCHHHHHHCCCcEec
Confidence 99 9999999999999999864
No 20
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.93 E-value=8e-26 Score=172.81 Aligned_cols=138 Identities=14% Similarity=0.249 Sum_probs=108.6
Q ss_pred eeecccccccccccccccccccc----------cCCCcccCHHHHHHHHh-CCCEEEEcCChhhH------------hcC
Q 031359 23 IGFISSKILSFCPKASLRGNLEA----------VGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF------------SAG 79 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~-~~~~liDvR~~~e~------------~~g 79 (161)
+-.|+||+.+|..+..+...-.. ......++.+++.++++ ++.+|||||++.|| ..|
T Consensus 123 V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~g 202 (296)
T 1rhs_A 123 VSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSG 202 (296)
T ss_dssp EEEETTHHHHHHHTTCCCBCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCC
T ss_pred EEEcCCCHHHHHHcCCccccCCCCCCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCc
Confidence 34689999999866432221100 01124678899888875 56899999999999 889
Q ss_pred CCCCcEEeccccccC-CCCCCCHHHHHHHHh--cCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhh-C
Q 031359 80 HATGAINVPYMYRVG-SGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQ-N 155 (161)
Q Consensus 80 hIpgA~nip~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~-~ 155 (161)
|||||+|||+..+.. .+.+.+.+.+...+. .++++++||+||.+|.+|..++..|+.+||++|++|+|||.+|.. .
T Consensus 203 hIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~ 282 (296)
T 1rhs_A 203 HIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRA 282 (296)
T ss_dssp EETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHS
T ss_pred cCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCC
Confidence 999999999965543 344556667776665 368899999999999999999999999999999999999999988 7
Q ss_pred CCCCC
Q 031359 156 GLPTE 160 (161)
Q Consensus 156 g~p~~ 160 (161)
++|++
T Consensus 283 ~~pv~ 287 (296)
T 1rhs_A 283 PPETW 287 (296)
T ss_dssp CGGGE
T ss_pred CCCcc
Confidence 99885
No 21
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=172.53 Aligned_cols=137 Identities=15% Similarity=0.284 Sum_probs=109.1
Q ss_pred eeecccccccccccccccccc---------cc-cCCCcccCHHHHHHHHh-CCCEEEEcCChhhH-----------hcCC
Q 031359 23 IGFISSKILSFCPKASLRGNL---------EA-VGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-----------SAGH 80 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~~---------~~-~~~~~~i~~~~~~~~~~-~~~~liDvR~~~e~-----------~~gh 80 (161)
+..|+||+.+|..+..+.... .. ......++.+++.++++ ++.+|||||++.|| ..||
T Consensus 138 V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~Gh 217 (302)
T 3olh_A 138 VSLLDGGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGH 217 (302)
T ss_dssp EEEETTHHHHHHHSCCC-CCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCC
T ss_pred EEECCCCHHHHHHcCCCcccCCCCcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCcc
Confidence 567899999999764222211 00 11123578888887775 56899999999999 7999
Q ss_pred CCCcEEeccccccC-CCCCCCHHHHHHHHh--cCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCC
Q 031359 81 ATGAINVPYMYRVG-SGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGL 157 (161)
Q Consensus 81 IpgA~nip~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~ 157 (161)
||||+|+|+..+.. .+.+.+.+.+.+.+. .++++++||+||++|.+|+.++..|+.+||++|++|+|||.+|.++|+
T Consensus 218 IpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~ 297 (302)
T 3olh_A 218 IPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRAR 297 (302)
T ss_dssp CTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHC
T ss_pred CCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccC
Confidence 99999999976553 355667777777766 468899999999999999999999999999999999999999999998
Q ss_pred CC
Q 031359 158 PT 159 (161)
Q Consensus 158 p~ 159 (161)
|.
T Consensus 298 P~ 299 (302)
T 3olh_A 298 PE 299 (302)
T ss_dssp CC
T ss_pred CC
Confidence 85
No 22
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.92 E-value=4.9e-25 Score=166.78 Aligned_cols=138 Identities=21% Similarity=0.308 Sum_probs=106.2
Q ss_pred eeecccccccccccccccccccc-----------cCCCcccCHHHHHHHHhCCCEEEEcCChhhHhc-------------
Q 031359 23 IGFISSKILSFCPKASLRGNLEA-----------VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA------------- 78 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~~~~-----------~~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~------------- 78 (161)
+-.|+||+.+|..+..+...... ......++.+++.++++.+. |||+|++.||..
T Consensus 106 v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~ 184 (277)
T 3aay_A 106 VKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQS 184 (277)
T ss_dssp EEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCC
T ss_pred EEEecCCHHHHHHcCCccccCCCCcCCCCccccCcccchhcCHHHHHHhcCCCC-EEEeCChHHeeeeeccccccccccc
Confidence 34688999999866422221100 00111367888888876555 999999999985
Q ss_pred ---CCCCCcEEeccccccC-CCCCCCHHHHHHHHh--cCCCCCeEEEEeCCchhHHHHHHHHHH-CCCcceeEecccHHH
Q 031359 79 ---GHATGAINVPYMYRVG-SGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLN-AGFAGITDIAGGFAA 151 (161)
Q Consensus 79 ---ghIpgA~nip~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~a~~~~~~L~~-~G~~~v~~l~GG~~~ 151 (161)
||||||+|+|+..+.. .+.+.+++.+...+. .++++++||+||.+|.+|..++..|++ +||++|++|+|||.+
T Consensus 185 ~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~ 264 (277)
T 3aay_A 185 QRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTE 264 (277)
T ss_dssp SCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHH
T ss_pred ccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHH
Confidence 9999999999864432 344566667777665 368899999999999999999999995 999999999999999
Q ss_pred Hhh-CCCCCCC
Q 031359 152 WRQ-NGLPTEP 161 (161)
Q Consensus 152 W~~-~g~p~~~ 161 (161)
|.+ +|+|+++
T Consensus 265 W~~~~g~pv~~ 275 (277)
T 3aay_A 265 YGSLVGAPIEL 275 (277)
T ss_dssp HTTSTTCCCBC
T ss_pred HhcCCCCCCcc
Confidence 998 8999874
No 23
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2e-25 Score=154.70 Aligned_cols=111 Identities=28% Similarity=0.433 Sum_probs=86.5
Q ss_pred CCcccCHHHHHHHHh--CCCEEEEcCChhhHhc-CCC------CCcEEeccccccCCCCCCCHHHHHHHHhc-----CCC
Q 031359 48 VPTSVPVRVAHELLQ--AGHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTR-----FRK 113 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~--~~~~liDvR~~~e~~~-ghI------pgA~nip~~~~~~~~~~~~~~~~~~~~~~-----l~~ 113 (161)
....|+++++.++++ ++++|||||++.||.. ||| |||+|+|+.. .. .. ..+.+...+... +++
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~-~~-~~~~~~~~l~~~l~~~~~~~ 79 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SD-GT-HNDNFLAELRDRIPADADQH 79 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TT-SC-BCTTHHHHHHHHCC------
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-cc-cc-cCHHHHHHHHHHHhhccCCC
Confidence 345689999998876 4689999999999997 999 9999999954 11 11 122233333332 378
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH------------HHHhhCCCCCCC
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF------------AAWRQNGLPTEP 161 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~------------~~W~~~g~p~~~ 161 (161)
+++|||||.+|.+|..++..|+.+||++|++|+||+ .+|+++|+|+++
T Consensus 80 ~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~ 139 (148)
T 2fsx_A 80 ERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQ 139 (148)
T ss_dssp -CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEEC
T ss_pred CCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCc
Confidence 899999999999999999999999999999999999 789999999863
No 24
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.91 E-value=1.8e-25 Score=155.64 Aligned_cols=106 Identities=19% Similarity=0.289 Sum_probs=87.2
Q ss_pred CCcccCHHHHHHHHh-CCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeC-Cch
Q 031359 48 VPTSVPVRVAHELLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ-SGK 125 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~-~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~-~g~ 125 (161)
....++++++.++++ ++++|||||++.||..||||||+|||+..+. +.+.++...++++++|||||. +|.
T Consensus 26 ~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~--------~~~~~l~~~~~~~~~iVvyC~~~G~ 97 (152)
T 1t3k_A 26 SISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFD--------DKISHLVQNVKDKDTLVFHSALSQV 97 (152)
T ss_dssp SSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSS--------TTHHHHHHTCCSCCEEEESSSCCSS
T ss_pred CCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHH--------HHHHHHHHhcCCCCEEEEEcCCCCc
Confidence 345678888777765 4588999999999999999999999984321 234555556678999999999 999
Q ss_pred hHHHHHHHHH--------HCCCcceeEecccHHHHhhCCCCCCC
Q 031359 126 RSMMAATDLL--------NAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 126 ~a~~~~~~L~--------~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
++..++..|. ..||++|++|+||+.+|.++|+|+++
T Consensus 98 rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 141 (152)
T 1t3k_A 98 RGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCR 141 (152)
T ss_dssp SHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCC
T ss_pred chHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCcccc
Confidence 9988888774 38999999999999999999999874
No 25
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.91 E-value=2.5e-24 Score=162.46 Aligned_cols=113 Identities=18% Similarity=0.163 Sum_probs=96.1
Q ss_pred CcccCHHHHHHHHh-CCCEEEEcCChhhHhcCCCCCcEEeccccccCC-----CCCCCHHHHHHHHhc--CCCCCeEEEE
Q 031359 49 PTSVPVRVAHELLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR--FRKHDEIIVG 120 (161)
Q Consensus 49 ~~~i~~~~~~~~~~-~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~-----~~~~~~~~~~~~~~~--l~~~~~ivv~ 120 (161)
+..++++++.++++ ++++|||||++.+|..||||||+|+|+..+... .+..+.+.+...+.. ++++++||||
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 87 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVY 87 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 45789999998885 458899999999999999999999998654321 345566677776665 6889999999
Q ss_pred eCCch-hHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 121 CQSGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 121 c~~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
|.+|. +|.++++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus 88 c~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~ 129 (271)
T 1e0c_A 88 DDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSR 129 (271)
T ss_dssp CSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccC
Confidence 99987 999999999999999999999999999999999863
No 26
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.91 E-value=1.1e-24 Score=176.04 Aligned_cols=121 Identities=24% Similarity=0.403 Sum_probs=102.7
Q ss_pred ceeecccccccccccccccccccccCCCcccCHHHHHHHHhC-CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCC
Q 031359 22 NIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN 100 (161)
Q Consensus 22 ~~~~l~gg~~~w~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~ 100 (161)
+..+++ |+.+|....... .....++++++.++++. +.+|||+|++.||..||||||+|+|+
T Consensus 353 v~~~l~-G~~~W~~~g~~~------~~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~----------- 414 (474)
T 3tp9_A 353 VVDWTD-PAAVDRAAPDDV------ASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPL----------- 414 (474)
T ss_dssp EEEEEC-GGGGTTCCGGGE------ECCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCH-----------
T ss_pred eEEecC-cHHHHHhccccc------ccccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCH-----------
Confidence 455676 899998763221 12346889999888764 58999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
..+...+..++++++||+||++|.+|..++..|+.+||++|++|+|||.+|.++|+|+++
T Consensus 415 -~~l~~~~~~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 415 -SKLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp -HHHTTTGGGSCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred -HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 345555667889999999999999999999999999999999999999999999999985
No 27
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.91 E-value=2.1e-24 Score=176.97 Aligned_cols=126 Identities=19% Similarity=0.308 Sum_probs=107.2
Q ss_pred eeccc-ccccccccccccccccccCCCcccCHHHHHHHHhC-CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCH
Q 031359 24 GFISS-KILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNL 101 (161)
Q Consensus 24 ~~l~g-g~~~w~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~ 101 (161)
-.|+| |+.+|.....+............++++++.+++++ +.+|||+|++.||..||||||+|+|.
T Consensus 350 ~~l~G~G~~~w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~------------ 417 (539)
T 1yt8_A 350 AVLDGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLR------------ 417 (539)
T ss_dssp EEECSCCGGGCCBCSSCCCCCCCCCCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCG------------
T ss_pred EEecCCChHHHHHhhccccCCCCCCcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCH------------
Confidence 35889 99999887544443333445568999999998865 48899999999999999999999998
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 102 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
..+...+..++++++||+||.+|.+|..++..|+.+||++|++|+||+.+|.++|+|+++
T Consensus 418 ~~l~~~l~~l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 477 (539)
T 1yt8_A 418 SQLKQALERLGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTED 477 (539)
T ss_dssp GGHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHHhCCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCccc
Confidence 345555566788999999999999999999999999999999999999999999999874
No 28
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.91 E-value=7e-25 Score=138.32 Aligned_cols=77 Identities=32% Similarity=0.567 Sum_probs=68.6
Q ss_pred CEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeEEEEeCCchhHHHHHHHHHHCCCcce
Q 031359 65 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 142 (161)
Q Consensus 65 ~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v 142 (161)
++|||+|++.||..||||||+|+|+ ..+...+..+ +++++||+||.+|.+|..++..|+++||++|
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPL------------KEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCH------------HHHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSE
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCH------------HHHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999998 3455555554 7889999999999999999999999999999
Q ss_pred eEecccHHHHhh
Q 031359 143 TDIAGGFAAWRQ 154 (161)
Q Consensus 143 ~~l~GG~~~W~~ 154 (161)
+++ |||.+|..
T Consensus 70 ~~l-GG~~~w~~ 80 (85)
T 2jtq_A 70 ENA-GGLKDIAM 80 (85)
T ss_dssp EEE-EETTTCCS
T ss_pred Eec-cCHHHHhc
Confidence 999 99999953
No 29
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.91 E-value=5.8e-24 Score=164.12 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=95.1
Q ss_pred CcccCHHHHHHHHhC-CCEEEEcCChhh-HhcCCCCCcEEecccccc---CCCCCCCHHHHHHHHhc--CCCCCeEEEEe
Q 031359 49 PTSVPVRVAHELLQA-GHRYLDVRTPEE-FSAGHATGAINVPYMYRV---GSGMTKNLKFVEEVSTR--FRKHDEIIVGC 121 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~-~~~liDvR~~~e-~~~ghIpgA~nip~~~~~---~~~~~~~~~~~~~~~~~--l~~~~~ivv~c 121 (161)
...++++++.+++++ +++|||||++.+ |..||||||+|+|+...+ ......+.+.+...+.. ++++++|||||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 347899999998854 588999999876 999999999999974322 22445566677777666 67899999999
Q ss_pred CCch-hHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 122 QSGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 122 ~~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
.+|. +|.++++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus 119 ~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 159 (318)
T 3hzu_A 119 DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTL 159 (318)
T ss_dssp SGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBC
T ss_pred CCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCccc
Confidence 9887 899999999999999999999999999999999864
No 30
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.91 E-value=2.5e-24 Score=146.19 Aligned_cols=103 Identities=24% Similarity=0.394 Sum_probs=78.1
Q ss_pred cccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCC---------------------CCCCHHHHHHHH
Q 031359 50 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSG---------------------MTKNLKFVEEVS 108 (161)
Q Consensus 50 ~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~---------------------~~~~~~~~~~~~ 108 (161)
..++++++.+ .++++|||||++.||..||||||+|+|+..+.... .......+....
T Consensus 5 ~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (134)
T 3g5j_A 5 SVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQA 82 (134)
T ss_dssp CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred cccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHHHHH
Confidence 4577777765 55689999999999999999999999984211000 000001223333
Q ss_pred hcCCCC-CeEEEEe-CCchhHHHHHHHHHHCCCcceeEecccHHHHhhC
Q 031359 109 TRFRKH-DEIIVGC-QSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQN 155 (161)
Q Consensus 109 ~~l~~~-~~ivv~c-~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~ 155 (161)
..++++ ++||+|| .+|.+|..+++.|+.+|| +|++|+||+.+|++.
T Consensus 83 ~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 83 AELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred HHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 445677 9999999 589999999999999999 999999999999874
No 31
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.90 E-value=1.6e-24 Score=146.04 Aligned_cols=105 Identities=24% Similarity=0.245 Sum_probs=80.8
Q ss_pred ccCHHHHHHHHhC--CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHH-------h--cCCCCCeEEE
Q 031359 51 SVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVS-------T--RFRKHDEIIV 119 (161)
Q Consensus 51 ~i~~~~~~~~~~~--~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~-------~--~l~~~~~ivv 119 (161)
.|+++++.++++. +++|||||++.||..||||||+|+|+..+... ....+.... . ..+++++||+
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~ivv 77 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERR----DAESLKLLKEAIWEEKQGTQEGAAVPIYV 77 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTT----CHHHHHHHHHHHHHHHTTC---CCEEEEE
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhh----hhhhHHHHHHHHhhhcccccCCCCCeEEE
Confidence 5788999888764 38999999999999999999999998533211 111111111 1 1234569999
Q ss_pred EeCCchhHHHHHHHHHHC------CCcceeEecccHHHHhhCCCCC
Q 031359 120 GCQSGKRSMMAATDLLNA------GFAGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 120 ~c~~g~~a~~~~~~L~~~------G~~~v~~l~GG~~~W~~~g~p~ 159 (161)
||.+|.+|..++..|++. |+.+|++|+||+.+|.+++.|.
T Consensus 78 ~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~ 123 (127)
T 3i2v_A 78 ICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGT 123 (127)
T ss_dssp ECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTT
T ss_pred EcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCC
Confidence 999999999999999998 6889999999999999887664
No 32
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.90 E-value=6.9e-24 Score=160.77 Aligned_cols=112 Identities=19% Similarity=0.197 Sum_probs=94.6
Q ss_pred cccCHHHHHHHHh-CCCEEEEcC----------ChhhHhcCCCCCcEEeccccccCC-----CCCCCHHHHHHHHhc--C
Q 031359 50 TSVPVRVAHELLQ-AGHRYLDVR----------TPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR--F 111 (161)
Q Consensus 50 ~~i~~~~~~~~~~-~~~~liDvR----------~~~e~~~ghIpgA~nip~~~~~~~-----~~~~~~~~~~~~~~~--l 111 (161)
..++++++.++++ ++++|||+| ++.+|..||||||+|+|+..+... .+..+.+.+...+.. +
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 4688999988876 458899999 789999999999999999644321 344556667776665 5
Q ss_pred CCCCeEEEEeCCchh-HHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 112 RKHDEIIVGCQSGKR-SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~-a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
+++++|||||.+|.+ |..+++.|+.+||++|++|+||+.+|..+|+|+++
T Consensus 84 ~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 134 (280)
T 1urh_A 84 NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEE 134 (280)
T ss_dssp CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBB
T ss_pred CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccC
Confidence 789999999999988 99999999999999999999999999999999863
No 33
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.90 E-value=2.9e-24 Score=146.52 Aligned_cols=106 Identities=21% Similarity=0.302 Sum_probs=85.7
Q ss_pred CcccCHHHHHHHHh--CCCEEEEcCChhhHhc-CCC------CCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeE
Q 031359 49 PTSVPVRVAHELLQ--AGHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEI 117 (161)
Q Consensus 49 ~~~i~~~~~~~~~~--~~~~liDvR~~~e~~~-ghI------pgA~nip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~i 117 (161)
...++++++.++++ ++++|||||++.||.. +|+ |||+|||+..+ ....++..+...+ +++++|
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~------~~~~~~~~l~~~~~~~~~~~i 77 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGE------DKPGFLKKLSLKFKDPENTTL 77 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGG------GHHHHHHHHHTTCSCGGGCEE
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccc------cChhHHHHHHHHhCCCCCCEE
Confidence 34689999988876 3588999999999985 333 79999998421 1223444443333 678999
Q ss_pred EEEeCCchhHHHHHHHHHHCCCcceeEecccH---HHHhhCCCCCC
Q 031359 118 IVGCQSGKRSMMAATDLLNAGFAGITDIAGGF---AAWRQNGLPTE 160 (161)
Q Consensus 118 vv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~---~~W~~~g~p~~ 160 (161)
||||.+|.||..++..|+++||++|++|.||+ .+|.++|+|++
T Consensus 78 vv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~ 123 (134)
T 1vee_A 78 YILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWI 123 (134)
T ss_dssp EEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEE
T ss_pred EEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCC
Confidence 99999999999999999999999999999999 78999999986
No 34
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.90 E-value=3e-23 Score=153.21 Aligned_cols=99 Identities=33% Similarity=0.506 Sum_probs=82.4
Q ss_pred ccCHHHHHHHHhCCCEEEEcCChhhHhc----------CCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEE
Q 031359 51 SVPVRVAHELLQAGHRYLDVRTPEEFSA----------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVG 120 (161)
Q Consensus 51 ~i~~~~~~~~~~~~~~liDvR~~~e~~~----------ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~ 120 (161)
.++.+++.+ +.+|||+|++.||.. ||||||+|+|+..+.... +.+.. ..++++++||+|
T Consensus 122 ~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-----e~~~~--~~~~~~~~iv~~ 190 (230)
T 2eg4_A 122 LLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-----GLLER--LGLQPGQEVGVY 190 (230)
T ss_dssp BCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-----THHHH--HTCCTTCEEEEE
T ss_pred eeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-----HHHHh--cCCCCCCCEEEE
Confidence 466776655 788999999999999 999999999996443211 11111 246789999999
Q ss_pred eCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 121 CQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 121 c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
|++|.+|..++..|+++| .+|++|+|||.+|.++|+|+++
T Consensus 191 C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 191 CHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp CSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred cCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 999999999999999999 8999999999999999999974
No 35
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.89 E-value=4e-23 Score=164.90 Aligned_cols=139 Identities=13% Similarity=0.171 Sum_probs=106.0
Q ss_pred eeeccccccccccccccccc-cccc-------------CCCcccCHHHHHHHHhC-CCEEEEcCChhhH-----------
Q 031359 23 IGFISSKILSFCPKASLRGN-LEAV-------------GVPTSVPVRVAHELLQA-GHRYLDVRTPEEF----------- 76 (161)
Q Consensus 23 ~~~l~gg~~~w~~~~~~~~~-~~~~-------------~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~----------- 76 (161)
+..++||+.+|.....+... .... .....++.+++.++++. +.+|||||++.||
T Consensus 231 v~~l~Gg~~~W~~~g~pv~~g~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~ 310 (423)
T 2wlr_A 231 VRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIK 310 (423)
T ss_dssp EEEETTTHHHHHHTTCCCBCSSCCCCCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCC
T ss_pred eEEECCCHHHHhhCCCCcccCCCCCCCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCC
Confidence 44688999999754322211 0000 01124788888887754 4789999999999
Q ss_pred hcCCCCCcEEeccc-------ccc-CCCCCCCHHHHHHHHh--cCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 77 SAGHATGAINVPYM-------YRV-GSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 77 ~~ghIpgA~nip~~-------~~~-~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
..||||||+|+|+. .+. ..+.+.+.+.+...+. .++++++||+||.+|.||..++..|+.+||++|++|+
T Consensus 311 ~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~ 390 (423)
T 2wlr_A 311 PKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYD 390 (423)
T ss_dssp CCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEES
T ss_pred cCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeC
Confidence 89999999999974 111 2244556667777664 4688999999999999999999999999999999999
Q ss_pred ccHHHHhh-CCCCCCC
Q 031359 147 GGFAAWRQ-NGLPTEP 161 (161)
Q Consensus 147 GG~~~W~~-~g~p~~~ 161 (161)
|||.+|.+ .|+|+++
T Consensus 391 GG~~~W~~~~~~Pv~~ 406 (423)
T 2wlr_A 391 GGWYEWSSDPKNPVAT 406 (423)
T ss_dssp SHHHHHTTSTTSCEEC
T ss_pred ccHHHHhcCCCCCccc
Confidence 99999998 8999863
No 36
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.89 E-value=8.4e-23 Score=156.05 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=94.2
Q ss_pred CcccCHHHHHHHHhC-----CCEEEEcC--------ChhhHhcCCCCCcEEeccccccC-----CCCCCCHHHHHHHHhc
Q 031359 49 PTSVPVRVAHELLQA-----GHRYLDVR--------TPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEVSTR 110 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~-----~~~liDvR--------~~~e~~~ghIpgA~nip~~~~~~-----~~~~~~~~~~~~~~~~ 110 (161)
...|+++++.+++++ +++||||| ++.+|..||||||+|+|+..+.. ..+..+.+.+...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 457899999998875 58899999 68999999999999999864322 1344555666666664
Q ss_pred --CCCCCeEEEEeCC--chh-HHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 111 --FRKHDEIIVGCQS--GKR-SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 111 --l~~~~~ivv~c~~--g~~-a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
++++++|||||.+ |.+ +.++++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus 87 lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 142 (296)
T 1rhs_A 87 LGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTS 142 (296)
T ss_dssp TTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCcccc
Confidence 5789999999998 776 88999999999999999999999999999999863
No 37
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.89 E-value=3.7e-23 Score=156.44 Aligned_cols=112 Identities=16% Similarity=0.225 Sum_probs=92.7
Q ss_pred cccCHHHHHHHHhC-CCEEEEcCC-hhhHhcCCCCCcEEeccccccC---CCCCCCHHHHHHHHhc--CCCCCeEEEEeC
Q 031359 50 TSVPVRVAHELLQA-GHRYLDVRT-PEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 122 (161)
Q Consensus 50 ~~i~~~~~~~~~~~-~~~liDvR~-~~e~~~ghIpgA~nip~~~~~~---~~~~~~~~~~~~~~~~--l~~~~~ivv~c~ 122 (161)
..++++++.+++++ +++|||||+ +.+|..||||||+|+|+..... .....+.+.+...+.. ++++++|||||.
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc~ 85 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGG 85 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEECS
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 36888999888765 478999998 8999999999999999853322 1334455566666665 788999999999
Q ss_pred Cch-hHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 123 SGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 123 ~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
+|. +|.++++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus 86 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 125 (277)
T 3aay_A 86 NNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSS 125 (277)
T ss_dssp GGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBC
T ss_pred CCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCcccc
Confidence 874 788999999999999999999999999999999863
No 38
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.89 E-value=7.2e-23 Score=149.57 Aligned_cols=102 Identities=18% Similarity=0.232 Sum_probs=84.3
Q ss_pred CCCcccCHHHHHHHHhC-------CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh---cCC--CC
Q 031359 47 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KH 114 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~---~l~--~~ 114 (161)
.....|+++++.++++. +++|||||++.||..||||||+|||+. ........ .++ ++
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~-----------~l~~~~~~~~~~l~~~~d 109 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLD 109 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHTTTCCCSSTT
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCch-----------HHHHHhhhhhhhccccCC
Confidence 44568899999998875 578999999999999999999999984 22222222 343 67
Q ss_pred CeE--EEEeC-CchhHHHHHHHHHH----------CCCcceeEecccHHHHhhCCCCC
Q 031359 115 DEI--IVGCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 115 ~~i--vv~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~p~ 159 (161)
++| |+||. +|.+|..++..|+. +||++|++|+||+.+|.++|.|+
T Consensus 110 ~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~ 167 (211)
T 1qb0_A 110 KRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 167 (211)
T ss_dssp SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccc
Confidence 887 78899 99999999999986 69999999999999999998775
No 39
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.89 E-value=7.5e-23 Score=145.30 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=81.0
Q ss_pred CCCcccCHHHHHHHHhC-------CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh---cCC--CC
Q 031359 47 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KH 114 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~---~l~--~~ 114 (161)
.....++++++.++++. +++|||||++.||..||||||+|+|+. +....... .++ ++
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~-----------~l~~~~~~~~~~~~~~~~ 89 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLD 89 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHSSCCCC----
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChh-----------HHHHHhhhhhhhccccCC
Confidence 34567999999998874 578999999999999999999999984 22222222 133 67
Q ss_pred CeEEE--EeC-CchhHHHHHHHHHH----------CCCcceeEecccHHHHhhCCCCC
Q 031359 115 DEIIV--GCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 115 ~~ivv--~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~p~ 159 (161)
++||| ||. +|.+|..++..|++ +||++|++|+||+.+|.++|.|+
T Consensus 90 ~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~ 147 (175)
T 2a2k_A 90 KRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 147 (175)
T ss_dssp CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccc
Confidence 88754 698 89999999999985 59999999999999999998775
No 40
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.89 E-value=1.3e-22 Score=155.43 Aligned_cols=115 Identities=18% Similarity=0.192 Sum_probs=93.4
Q ss_pred CCCcccCHHHHHHHHhC-----CCEEEEcC---------ChhhHhcCCCCCcEEeccccccC-----CCCCCCHHHHHHH
Q 031359 47 GVPTSVPVRVAHELLQA-----GHRYLDVR---------TPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEV 107 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~-----~~~liDvR---------~~~e~~~ghIpgA~nip~~~~~~-----~~~~~~~~~~~~~ 107 (161)
.....|+++++.+++++ +++||||| ++.+|..||||||+|+|+..+.. ..+....+.+...
T Consensus 19 ~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~ 98 (302)
T 3olh_A 19 YFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEY 98 (302)
T ss_dssp -CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred CCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence 34457899999998875 68899999 78999999999999999854321 2334556667777
Q ss_pred HhcC--CCCCeEEEEeCC---chhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 108 STRF--RKHDEIIVGCQS---GKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 108 ~~~l--~~~~~ivv~c~~---g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
+..+ +++++|||||.+ +.+|.++++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus 99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 157 (302)
T 3olh_A 99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSS 157 (302)
T ss_dssp HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CC
T ss_pred HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCccc
Confidence 6664 789999999964 35699999999999999999999999999999999864
No 41
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.89 E-value=5.1e-23 Score=144.28 Aligned_cols=101 Identities=17% Similarity=0.292 Sum_probs=82.5
Q ss_pred CCcccCHHHHHHHHhC-------CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh---cC-CCCCe
Q 031359 48 VPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RF-RKHDE 116 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~---~l-~~~~~ 116 (161)
....++++++.++++. +++|||||++.||..||||||+|+|+. +....... .+ +++++
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~-----------~~~~~~~~~~~~~~~~~~~ 89 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHME-----------EEVEDFLLKKPIVPTDGKR 89 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHTTTSCCCCCTTSE
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChh-----------HHHHHHHhhhhhccCCCCC
Confidence 3457999999998875 578999999999999999999999984 22233222 23 46777
Q ss_pred E--EEEeC-CchhHHHHHHHHHH----------CCCcceeEecccHHHHhhCCCCC
Q 031359 117 I--IVGCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 117 i--vv~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~p~ 159 (161)
| |+||. +|.+|..++..|++ +||++|++|+||+.+|.+++.|+
T Consensus 90 ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~ 145 (161)
T 1c25_A 90 VIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSY 145 (161)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGG
T ss_pred eEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccc
Confidence 6 67899 99999999999986 49999999999999999887665
No 42
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.89 E-value=2.9e-23 Score=157.67 Aligned_cols=112 Identities=16% Similarity=0.194 Sum_probs=93.0
Q ss_pred cccCHHHHHHHHhC-CCEEEEcC-ChhhHhcCCCCCcEEeccccccC---CCCCCCHHHHHHHHhc--CCCCCeEEEEeC
Q 031359 50 TSVPVRVAHELLQA-GHRYLDVR-TPEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 122 (161)
Q Consensus 50 ~~i~~~~~~~~~~~-~~~liDvR-~~~e~~~ghIpgA~nip~~~~~~---~~~~~~~~~~~~~~~~--l~~~~~ivv~c~ 122 (161)
..++++++.+++++ +++||||| ++.+|..||||||+|+|+...+. .....+.+.+...+.. ++++++|||||.
T Consensus 8 ~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvyc~ 87 (285)
T 1uar_A 8 VLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGD 87 (285)
T ss_dssp GEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEECH
T ss_pred ceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 46899999888765 58899999 78999999999999999853221 2334455566666665 578999999999
Q ss_pred Cch-hHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 123 SGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 123 ~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
+|. +|..+++.|+.+||++|++|+||+.+|..+|+|+++
T Consensus 88 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 127 (285)
T 1uar_A 88 KNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTT 127 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBC
T ss_pred CCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccC
Confidence 987 799999999999999999999999999999999863
No 43
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.88 E-value=2.1e-22 Score=160.79 Aligned_cols=112 Identities=19% Similarity=0.262 Sum_probs=96.3
Q ss_pred cccCHHHHHHHHh---------CCCEEEEcC--ChhhHhcCCCCCcEEeccccccC--CCCCCCHHHHHHHHhc--CCCC
Q 031359 50 TSVPVRVAHELLQ---------AGHRYLDVR--TPEEFSAGHATGAINVPYMYRVG--SGMTKNLKFVEEVSTR--FRKH 114 (161)
Q Consensus 50 ~~i~~~~~~~~~~---------~~~~liDvR--~~~e~~~ghIpgA~nip~~~~~~--~~~~~~~~~~~~~~~~--l~~~ 114 (161)
..++++++.++++ ++.+|||+| ++.+|..||||||+|+|+..+.. ...+.+.+.+.+.+.. ++++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~ 203 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHD 203 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTT
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 4688898888876 257899999 99999999999999999965533 2456677777777754 6789
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
++||+||++|.+|+.++..|+.+||++|++|+|||.+|..+|+|+++
T Consensus 204 ~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~ 250 (423)
T 2wlr_A 204 TTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVER 250 (423)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBC
T ss_pred CeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCccc
Confidence 99999999999999999999999999999999999999999999863
No 44
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.88 E-value=1.5e-23 Score=164.87 Aligned_cols=98 Identities=17% Similarity=0.305 Sum_probs=81.2
Q ss_pred hCCCEEEEcCChhhHh-----------cCCCCCcEEecccccc--C-CCC-CCCHHHHHHHHhcC----CC---CCeEEE
Q 031359 62 QAGHRYLDVRTPEEFS-----------AGHATGAINVPYMYRV--G-SGM-TKNLKFVEEVSTRF----RK---HDEIIV 119 (161)
Q Consensus 62 ~~~~~liDvR~~~e~~-----------~ghIpgA~nip~~~~~--~-~~~-~~~~~~~~~~~~~l----~~---~~~ivv 119 (161)
.++.+|||||++.||. .||||||+|||+..+. . .+. +.+.+.+...+..+ ++ +++||+
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivv 251 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 251 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEE
Confidence 4568899999999999 9999999999996554 2 223 45666777776654 77 899999
Q ss_pred EeCCchhHHHHHHHHHHCCCcceeEecccHHHHhh-CCCCC
Q 031359 120 GCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQ-NGLPT 159 (161)
Q Consensus 120 ~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~-~g~p~ 159 (161)
||++|.||..++..|+.+||++|++|+|||.+|.. .++|+
T Consensus 252 yC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv 292 (373)
T 1okg_A 252 SCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPI 292 (373)
T ss_dssp ECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHH
T ss_pred ECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCc
Confidence 99999999999999999999999999999999987 57765
No 45
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.87 E-value=7.2e-23 Score=142.35 Aligned_cols=109 Identities=18% Similarity=0.175 Sum_probs=77.9
Q ss_pred cccCHHHHHHHHh---CCCEEEEcCChhhHhcCCCCCcEEeccccccCC----CCCCCHHHH-HHHHh--cCCCCCeEEE
Q 031359 50 TSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGS----GMTKNLKFV-EEVST--RFRKHDEIIV 119 (161)
Q Consensus 50 ~~i~~~~~~~~~~---~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~----~~~~~~~~~-~~~~~--~l~~~~~ivv 119 (161)
..|+++++.++++ ++++|||||++.||..||||||+|||+..+... +.......+ ..... .++++++|||
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iVv 83 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVVV 83 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEEE
Confidence 4688999999886 358899999999999999999999998532100 000000000 00001 2467899999
Q ss_pred EeCCchhHHHH------HHHHHHC--CCcceeEecccHHHHhhCCCC
Q 031359 120 GCQSGKRSMMA------ATDLLNA--GFAGITDIAGGFAAWRQNGLP 158 (161)
Q Consensus 120 ~c~~g~~a~~~------~~~L~~~--G~~~v~~l~GG~~~W~~~g~p 158 (161)
||.+|.++..+ +..|+.+ ||++|++|+||+.+|.+++.+
T Consensus 84 yc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~ 130 (153)
T 2vsw_A 84 YDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPG 130 (153)
T ss_dssp ECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGG
T ss_pred EeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChh
Confidence 99999877655 5777744 999999999999999886543
No 46
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.87 E-value=1.6e-22 Score=159.01 Aligned_cols=110 Identities=16% Similarity=0.077 Sum_probs=91.5
Q ss_pred CcccCHHHHHHHHhCCCEEEEcCC--------hhhHhcCCCCCcEEecccc-ccC-------CCCCCCHHHHHHHHh--c
Q 031359 49 PTSVPVRVAHELLQAGHRYLDVRT--------PEEFSAGHATGAINVPYMY-RVG-------SGMTKNLKFVEEVST--R 110 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~liDvR~--------~~e~~~ghIpgA~nip~~~-~~~-------~~~~~~~~~~~~~~~--~ 110 (161)
...++++++.+++++ ++|||||+ +.||..||||||+|+|+.. +.. .......+.+...+. .
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~g 91 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANG 91 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHTT
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHcC
Confidence 468899999888776 89999998 6999999999999999964 322 133455566666654 3
Q ss_pred CCCCCeEEEEe-CCchhHH-HHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 111 FRKHDEIIVGC-QSGKRSM-MAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 111 l~~~~~ivv~c-~~g~~a~-~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
++++++||||| .+|.+++ ++++.|+.+|| +|++|+||+.+|.++|+|++
T Consensus 92 i~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~ 142 (373)
T 1okg_A 92 MAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEME 142 (373)
T ss_dssp CSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEE
T ss_pred CCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcc
Confidence 67899999999 6787876 99999999999 99999999999999999975
No 47
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.87 E-value=6.4e-22 Score=144.76 Aligned_cols=99 Identities=19% Similarity=0.233 Sum_probs=78.8
Q ss_pred CCCcccCHHHHHHHHhC-------CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh---cC--CCC
Q 031359 47 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RF--RKH 114 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~---~l--~~~ 114 (161)
.....|+++++.++++. +++|||||++.||..||||||+|||+. +.+...+. .+ +++
T Consensus 54 ~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~-----------~~l~~~l~~~~~~~~~~~ 122 (216)
T 3op3_A 54 QDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQ-----------EELFNFFLKKPIVPLDTQ 122 (216)
T ss_dssp SSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSH-----------HHHHHHHTSSCCCCSSTT
T ss_pred CCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChH-----------HHHHHHHhhccccccccC
Confidence 34568999999999875 378999999999999999999999983 33433332 12 234
Q ss_pred C--eEEEEeC-CchhHHHHHHHHHHC----------CCcceeEecccHHHHhhCC
Q 031359 115 D--EIIVGCQ-SGKRSMMAATDLLNA----------GFAGITDIAGGFAAWRQNG 156 (161)
Q Consensus 115 ~--~ivv~c~-~g~~a~~~~~~L~~~----------G~~~v~~l~GG~~~W~~~g 156 (161)
+ +|||||. +|.||..++..|+.. ||.+|++|+||+.+|.++.
T Consensus 123 k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~ 177 (216)
T 3op3_A 123 KRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY 177 (216)
T ss_dssp SEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred CCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence 4 4999999 999999999999886 8999999999999998763
No 48
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.87 E-value=4.3e-22 Score=138.47 Aligned_cols=103 Identities=20% Similarity=0.270 Sum_probs=78.6
Q ss_pred CcccCHHHHHHHHhC-----CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeEEEEe
Q 031359 49 PTSVPVRVAHELLQA-----GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGC 121 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~-----~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivv~c 121 (161)
...|+++++.+++++ +++|||||++ ||..||||||+|||+..+. ...+..+...+ ...+.||+||
T Consensus 4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~-------~~~~~~l~~~l~~~~~~~vV~yC 75 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCT-------EEMYEKLAKTLFEEKKELAVFHC 75 (152)
T ss_dssp CEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCC-------HHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhh-------HHHHHHHHHHhcccCCCEEEEEc
Confidence 356899999988875 6889999999 9999999999999984221 11222222222 2334677789
Q ss_pred -CCchhHHHHH----HHHHHCCC--cceeEecccHHHHhhCCCCC
Q 031359 122 -QSGKRSMMAA----TDLLNAGF--AGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 122 -~~g~~a~~~~----~~L~~~G~--~~v~~l~GG~~~W~~~g~p~ 159 (161)
.+|.++..++ ..|++.|| .+|++|+||+.+|.++|.++
T Consensus 76 ~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~ 120 (152)
T 2j6p_A 76 AQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDV 120 (152)
T ss_dssp SSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTT
T ss_pred CCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCC
Confidence 6898988887 77888997 58999999999999988765
No 49
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.87 E-value=3.1e-22 Score=136.96 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=74.8
Q ss_pred ccCHHHHHH--------HHh-CCCEEEEcCChhhHhcCCCCCcEEeccccccCC-----CCCCCHHHHHH-----HHhcC
Q 031359 51 SVPVRVAHE--------LLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEE-----VSTRF 111 (161)
Q Consensus 51 ~i~~~~~~~--------~~~-~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~-----~~~~~~~~~~~-----~~~~l 111 (161)
.|+++++.+ +++ ++++|||+|++.||..||||||+|+|+..+... .....+..+.. .....
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 467888877 443 358999999999999999999999998532210 00000011100 00000
Q ss_pred CCCCeEEEEeCCchhH---------HHHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 112 RKHDEIIVGCQSGKRS---------MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a---------~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
++++||+||.+|.++ ..++..|...|| +|++|+||+.+|.++|.++.
T Consensus 82 -~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~ 137 (142)
T 2ouc_A 82 -FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLC 137 (142)
T ss_dssp -HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGE
T ss_pred -CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhh
Confidence 268899999998774 467888999999 99999999999999998763
No 50
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.86 E-value=5.7e-22 Score=162.52 Aligned_cols=100 Identities=24% Similarity=0.294 Sum_probs=87.0
Q ss_pred CcccCHHHHHHHHhC--CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc-C-CCCCeEEEEeCCc
Q 031359 49 PTSVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR-F-RKHDEIIVGCQSG 124 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~--~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~-l-~~~~~ivv~c~~g 124 (161)
...|+++++++++++ +++|||||++.+|..||||||+|+|+. .+...... . +++++|||||.+|
T Consensus 6 ~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~------------~~~~~~~~l~~~~~~~iVvyc~~g 73 (539)
T 1yt8_A 6 IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLS------------RLELEIHARVPRRDTPITVYDDGE 73 (539)
T ss_dssp CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGG------------GHHHHHHHHSCCTTSCEEEECSSS
T ss_pred CcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHHhhCCCCCCeEEEEECCC
Confidence 457899999988863 589999999999999999999999984 23333333 3 4789999999999
Q ss_pred hhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 125 KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 125 ~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
.+|.++++.|+.+||+||++|+||+.+|.++|+|++
T Consensus 74 ~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 109 (539)
T 1yt8_A 74 GLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELF 109 (539)
T ss_dssp SHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCB
T ss_pred ChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcc
Confidence 999999999999999999999999999999999986
No 51
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.86 E-value=6.1e-22 Score=148.72 Aligned_cols=101 Identities=21% Similarity=0.263 Sum_probs=83.9
Q ss_pred CCcccCHHHHHHHHhC-CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc--CCCCCeEEEEeCCc
Q 031359 48 VPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR--FRKHDEIIVGCQSG 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~--l~~~~~ivv~c~~g 124 (161)
....++++++.+++++ +++|||||++.||..||||||+|+|+..+ .++..+.... .+++++||+||.+|
T Consensus 120 ~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~--------~~~~~~l~~~l~~~kdk~IVvyC~~G 191 (265)
T 4f67_A 120 AGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENF--------REFPDYVQRNLIDKKDKKIAMFCTGG 191 (265)
T ss_dssp TTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSG--------GGHHHHHHHHTGGGTTSCEEEECSSS
T ss_pred CCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHH--------HhhHHHHHHhhhhCCCCeEEEEeCCC
Confidence 3457899999999865 48999999999999999999999998422 1222222222 36789999999999
Q ss_pred hhHHHHHHHHHHCCCcceeEecccHHHHhhCC
Q 031359 125 KRSMMAATDLLNAGFAGITDIAGGFAAWRQNG 156 (161)
Q Consensus 125 ~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g 156 (161)
.+|..++..|++.||++|++|+||+.+|.++.
T Consensus 192 ~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~ 223 (265)
T 4f67_A 192 IRCEKTTAYMKELGFEHVYQLHDGILNYLESI 223 (265)
T ss_dssp HHHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred hHHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence 99999999999999999999999999998764
No 52
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.85 E-value=8.4e-21 Score=146.58 Aligned_cols=107 Identities=20% Similarity=0.329 Sum_probs=82.8
Q ss_pred ccCHHHHHHHHhCC-----CEEEEcCChhhHh-----------cCCCCCcEEeccccccCCC--CCC-CHHH----HHHH
Q 031359 51 SVPVRVAHELLQAG-----HRYLDVRTPEEFS-----------AGHATGAINVPYMYRVGSG--MTK-NLKF----VEEV 107 (161)
Q Consensus 51 ~i~~~~~~~~~~~~-----~~liDvR~~~e~~-----------~ghIpgA~nip~~~~~~~~--~~~-~~~~----~~~~ 107 (161)
.++.+++.+.++.+ .+|||+|++++|. .||||||+|+|+..++.+. +.. ..+. +++.
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~ 264 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKA 264 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHH
Confidence 35666777776553 6899999999996 5999999999997776432 222 2222 2222
Q ss_pred Hh----cCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCC
Q 031359 108 ST----RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGL 157 (161)
Q Consensus 108 ~~----~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~ 157 (161)
+. .++++++||+||++|.+|+..+..|+.+||++|++|+|+|.+|.....
T Consensus 265 ~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~ 318 (327)
T 3utn_X 265 LKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSG 318 (327)
T ss_dssp HHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHC
T ss_pred HHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccC
Confidence 22 367889999999999999999999999999999999999999986543
No 53
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.85 E-value=3.6e-22 Score=141.17 Aligned_cols=108 Identities=22% Similarity=0.315 Sum_probs=79.1
Q ss_pred CCCcccCHHHHHHHHhC--------CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC-------
Q 031359 47 GVPTSVPVRVAHELLQA--------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------- 111 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~--------~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l------- 111 (161)
.....|+++++.++++. +++|||||+ .||..||||||+|||+..+.. ....+.++...+
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~-----~~~~l~~l~~~~~~~~~~~ 101 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQ-----DPEYLRELKHRLLEKQADG 101 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHH-----CHHHHHHHHHHHHHHHHTS
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhc-----ccccHHHHHHHHHhhcccc
Confidence 34457999999998864 378999999 999999999999999843211 101122222211
Q ss_pred CCCCeEEEEeCCc-hhHHHHHHHHHH----CC--CcceeEecccHHHHhhCCCCCC
Q 031359 112 RKHDEIIVGCQSG-KRSMMAATDLLN----AG--FAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~~~~~L~~----~G--~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
..+++|||||.+| .|+..++..|.+ .| +.+|++|+||+.+|.+++.|.+
T Consensus 102 ~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~ 157 (169)
T 3f4a_A 102 RGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDE 157 (169)
T ss_dssp SSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCT
T ss_pred cCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcc
Confidence 1247999999987 888888876654 36 5789999999999999887654
No 54
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.83 E-value=2.8e-20 Score=130.02 Aligned_cols=105 Identities=19% Similarity=0.248 Sum_probs=77.3
Q ss_pred CCCcccCHHHHHHHHhC---------CCEEEEcCChhhHhcCCCCCcEEecccccc-----CCCCCCCHHHHHHHH----
Q 031359 47 GVPTSVPVRVAHELLQA---------GHRYLDVRTPEEFSAGHATGAINVPYMYRV-----GSGMTKNLKFVEEVS---- 108 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~---------~~~liDvR~~~e~~~ghIpgA~nip~~~~~-----~~~~~~~~~~~~~~~---- 108 (161)
.....|+++++.++++. +.+|||+|++.||..||||||+|+|+..++ ..+... +....
T Consensus 8 ~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~----~~~~~~~~~ 83 (158)
T 3tg1_B 8 ASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKIT----VLDLISCRE 83 (158)
T ss_dssp ---CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCC----HHHHTCCCC
T ss_pred CCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCccc----HHhhcCCHH
Confidence 45568999999998862 489999999999999999999999995331 100000 00000
Q ss_pred --hcC--CCCCeEEEEeCCc---------hhHHHHHHHHHHCCCcceeEecccHHHHhhCC
Q 031359 109 --TRF--RKHDEIIVGCQSG---------KRSMMAATDLLNAGFAGITDIAGGFAAWRQNG 156 (161)
Q Consensus 109 --~~l--~~~~~ivv~c~~g---------~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g 156 (161)
..+ .++++|||||.+| .++..++..|+..|| +|++|+|||.+|.++.
T Consensus 84 ~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~ 143 (158)
T 3tg1_B 84 GKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH 143 (158)
T ss_dssp SSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred HHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence 011 2478999999998 468899999999999 6999999999998753
No 55
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.83 E-value=2.4e-21 Score=134.64 Aligned_cols=105 Identities=20% Similarity=0.188 Sum_probs=76.9
Q ss_pred CcccCHHHHHHHHhC---CCEEEEcCChhhHhcCCCCCcEEecccccc-----CC-----CCCCCHHHHHHHHhcCCCCC
Q 031359 49 PTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRV-----GS-----GMTKNLKFVEEVSTRFRKHD 115 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgA~nip~~~~~-----~~-----~~~~~~~~~~~~~~~l~~~~ 115 (161)
...++++++.+++++ +++|||||++.||..||||||+|+|+..+. .. .....+. ....+..+++++
T Consensus 15 ~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 93 (154)
T 1hzm_A 15 AISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGE-DRDRFTRRCGTD 93 (154)
T ss_dssp SSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSH-HHHHHHHSTTSS
T ss_pred ccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHH-HHHHHhccCCCC
Confidence 346777778777653 689999999999999999999999985432 01 1222221 223344567789
Q ss_pred eEEEEeCCchhH-------HHHHHHHHHC---CCcceeEecccHHHHhhC
Q 031359 116 EIIVGCQSGKRS-------MMAATDLLNA---GFAGITDIAGGFAAWRQN 155 (161)
Q Consensus 116 ~ivv~c~~g~~a-------~~~~~~L~~~---G~~~v~~l~GG~~~W~~~ 155 (161)
+|||||.+|.++ ..+++.|+.+ ||+ |++|+||+.+|.++
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred eEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 999999998764 4446667655 998 99999999999875
No 56
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.83 E-value=9.5e-21 Score=156.43 Aligned_cols=95 Identities=25% Similarity=0.492 Sum_probs=85.4
Q ss_pred CcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHH
Q 031359 49 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 128 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~ 128 (161)
...++++++.++++++.+|||||++.||..||||||+|+|+ +.+......++++++||+||.+|.+|.
T Consensus 488 ~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga~~ip~------------~~l~~~~~~l~~~~~iv~~C~~g~rs~ 555 (588)
T 3ics_A 488 VDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGSINIPL------------DELRDRLEEVPVDKDIYITCQLGMRGY 555 (588)
T ss_dssp CCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTEEECCH------------HHHTTCGGGSCSSSCEEEECSSSHHHH
T ss_pred cceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCCEECCH------------HHHHHHHhhCCCCCeEEEECCCCcHHH
Confidence 45678888888888889999999999999999999999998 456666667889999999999999999
Q ss_pred HHHHHHHHCCCcceeEecccHHHHhhCC
Q 031359 129 MAATDLLNAGFAGITDIAGGFAAWRQNG 156 (161)
Q Consensus 129 ~~~~~L~~~G~~~v~~l~GG~~~W~~~g 156 (161)
.+++.|++.||+ |++|+||+.+|.++.
T Consensus 556 ~a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 556 VAARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp HHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred HHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 999999999998 999999999998753
No 57
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.82 E-value=3.7e-21 Score=157.93 Aligned_cols=91 Identities=27% Similarity=0.477 Sum_probs=77.1
Q ss_pred cCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHH
Q 031359 52 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAA 131 (161)
Q Consensus 52 i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~ 131 (161)
++++++.++ +++.+|||||++.||..||||||+|+|+. .+......++++++||+||.+|.+|..++
T Consensus 475 i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga~~ip~~------------~l~~~~~~~~~~~~iv~~c~~g~rs~~a~ 541 (565)
T 3ntd_A 475 IHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGAVNIPVD------------ELRDRMHELPKDKEIIIFSQVGLRGNVAY 541 (565)
T ss_dssp ECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTCEECCGG------------GTTTSGGGSCTTSEEEEECSSSHHHHHHH
T ss_pred eeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCcEECCHH------------HHHHHHhhcCCcCeEEEEeCCchHHHHHH
Confidence 444444444 44578999999999999999999999993 33444556889999999999999999999
Q ss_pred HHHHHCCCcceeEecccHHHHhhCC
Q 031359 132 TDLLNAGFAGITDIAGGFAAWRQNG 156 (161)
Q Consensus 132 ~~L~~~G~~~v~~l~GG~~~W~~~g 156 (161)
+.|++.|| +|++|+||+.+|.++|
T Consensus 542 ~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 542 RQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHcCC-CEEEEcChHHHHHhCc
Confidence 99999999 9999999999999876
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.80 E-value=7.9e-20 Score=134.84 Aligned_cols=92 Identities=17% Similarity=0.123 Sum_probs=72.2
Q ss_pred CCCEEEEcCChhhHhcCCCCCcEEeccc--cccCC---CCCCCHHHHHHHHhcCCCCCeEEEEeCCch-hHHHHHHHHHH
Q 031359 63 AGHRYLDVRTPEEFSAGHATGAINVPYM--YRVGS---GMTKNLKFVEEVSTRFRKHDEIIVGCQSGK-RSMMAATDLLN 136 (161)
Q Consensus 63 ~~~~liDvR~~~e~~~ghIpgA~nip~~--~~~~~---~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~-~a~~~~~~L~~ 136 (161)
++++|||+|++.+|..||||||+|+|+. .+... .+....+.+...+..++.+++|||||.+|. +|.++++.|+
T Consensus 5 ~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~- 83 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLG- 83 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHH-
T ss_pred CCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHH-
Confidence 4589999999999999999999999985 22100 001112345666666666899999999988 9999999999
Q ss_pred CCCcceeEecccHHHHhhCCCCCC
Q 031359 137 AGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 137 ~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
+||++|++|+|| |.+ +|++
T Consensus 84 ~G~~~v~~l~GG---W~~--~p~~ 102 (230)
T 2eg4_A 84 LGGLEVQLWTEG---WEP--YATE 102 (230)
T ss_dssp HTTCCEEEECSS---CGG--GCCB
T ss_pred cCCceEEEeCCC---Ccc--Cccc
Confidence 999999999999 876 6664
No 59
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.80 E-value=4.7e-21 Score=154.63 Aligned_cols=86 Identities=33% Similarity=0.475 Sum_probs=0.0
Q ss_pred HHHHHh-CCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHH
Q 031359 57 AHELLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL 135 (161)
Q Consensus 57 ~~~~~~-~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~ 135 (161)
+.++++ ++.+|||||++.||..||||||+|+|+. .+...+..++++++||+||.+|.+|..++..|+
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~~C~~G~rs~~a~~~L~ 446 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHG------------KLLETDLPFNKNDVIYVHCQSGIRSSIAIGILE 446 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHH------------HHHHHHhhCCCCCeEEEECCCChHHHHHHHHHH
Confidence 444443 3478999999999999999999999993 345555667889999999999999999999999
Q ss_pred HCCCcceeEecccHHHHhh
Q 031359 136 NAGFAGITDIAGGFAAWRQ 154 (161)
Q Consensus 136 ~~G~~~v~~l~GG~~~W~~ 154 (161)
++||++|++|+|||.+|.+
T Consensus 447 ~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 447 HKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp -------------------
T ss_pred HcCCCCEEEecChHHHHhh
Confidence 9999999999999999975
No 60
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.3e-18 Score=134.40 Aligned_cols=114 Identities=14% Similarity=0.081 Sum_probs=92.1
Q ss_pred CCCcccCHHHHHHHHhCC----CEEEEcC--------C-hhhH-hcCCCCCcEEecccccc-----CCCCCCCHHHHHHH
Q 031359 47 GVPTSVPVRVAHELLQAG----HRYLDVR--------T-PEEF-SAGHATGAINVPYMYRV-----GSGMTKNLKFVEEV 107 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~~----~~liDvR--------~-~~e~-~~ghIpgA~nip~~~~~-----~~~~~~~~~~~~~~ 107 (161)
+....|+++++.++++.+ +++||++ + ..|| ++||||||++++++.+. ...++++++.+++.
T Consensus 25 ~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~ 104 (327)
T 3utn_X 25 PLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDA 104 (327)
T ss_dssp CSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHH
T ss_pred ccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHH
Confidence 444579999999998632 6789985 2 3466 78999999999985432 22557778888888
Q ss_pred Hhc--CCCCCeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCCCC
Q 031359 108 STR--FRKHDEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 161 (161)
Q Consensus 108 ~~~--l~~~~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 161 (161)
+.. +.++++||||++.+ ..|+++|++|+.+|+++|++|+|| .+|.++|+|+++
T Consensus 105 l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~ 160 (327)
T 3utn_X 105 MSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDS 160 (327)
T ss_dssp HHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBC
T ss_pred HHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCccc
Confidence 776 57899999998865 568899999999999999999977 899999999863
No 61
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.77 E-value=1.2e-18 Score=121.70 Aligned_cols=110 Identities=10% Similarity=0.107 Sum_probs=73.3
Q ss_pred CCcccCHHHHHHHHhC---CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCC------CCHHHHHHHHhcCCCCCeEE
Q 031359 48 VPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMT------KNLKFVEEVSTRFRKHDEII 118 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~------~~~~~~~~~~~~l~~~~~iv 118 (161)
....|+++++.++++. +++|||||++.||+.||||||+|||...+ ..... ..++.....+....+.+.||
T Consensus 18 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l-~~~~~~~~l~~~lp~~~~~l~~~~~~~~~VV 96 (157)
T 2gwf_A 18 GSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAI-SPGVTASWIEAHLPDDSKDTWKKRGNVEYVV 96 (157)
T ss_dssp -CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGC-CTTCCHHHHHHTSCHHHHHHHHTTTTSSEEE
T ss_pred CCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHc-CCCCcHHHHHHHcCHHHHHHHHhcCCCCEEE
Confidence 3457899999988764 57899999999999999999999998532 21110 00111222333334455689
Q ss_pred EEeCCchh----HHHHHHHHH----HC----CCc-ceeEecccHHHHhhCCCCC
Q 031359 119 VGCQSGKR----SMMAATDLL----NA----GFA-GITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 119 v~c~~g~~----a~~~~~~L~----~~----G~~-~v~~l~GG~~~W~~~g~p~ 159 (161)
+||.++.+ +..+++.|. +. |+. +|++|+||+.+|.+. +|+
T Consensus 97 vy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 149 (157)
T 2gwf_A 97 LLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 149 (157)
T ss_dssp EECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGG
T ss_pred EEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chh
Confidence 99987643 334555544 32 444 399999999999874 664
No 62
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.77 E-value=1.3e-18 Score=121.42 Aligned_cols=111 Identities=10% Similarity=0.108 Sum_probs=74.1
Q ss_pred CCCcccCHHHHHHHHhC---CCEEEEcCChhhHhcCCCCCcEEeccccccCCCCC------CCHHHHHHHHhcCCCCCeE
Q 031359 47 GVPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMT------KNLKFVEEVSTRFRKHDEI 117 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~------~~~~~~~~~~~~l~~~~~i 117 (161)
+....|+++++.++++. +++|||||++.||+.||||||+|||...+ ..... ..++.....+......+.|
T Consensus 12 ~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~-~~~~~~~~l~~~lp~~~~~~~~~~~~~~~V 90 (157)
T 1whb_A 12 KEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAI-SPGVTASWIEAHLPDDSKDTWKKRGNVEYV 90 (157)
T ss_dssp CCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSC-CTTCCHHHHHHSCCTTHHHHHHGGGTSSEE
T ss_pred ccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHc-cCCCcHHHHHHHCChHHHHHHHhcCCCCEE
Confidence 44567899999988864 57899999999999999999999998532 11100 0001111222222334569
Q ss_pred EEEeCCchh----HHHHHHHHHH----C----CCc-ceeEecccHHHHhhCCCCC
Q 031359 118 IVGCQSGKR----SMMAATDLLN----A----GFA-GITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 118 vv~c~~g~~----a~~~~~~L~~----~----G~~-~v~~l~GG~~~W~~~g~p~ 159 (161)
|+||..+.+ +..+++.|.+ . ||. +|++|+||+.+|.+. +|+
T Consensus 91 Vvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 144 (157)
T 1whb_A 91 VLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 144 (157)
T ss_dssp EEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGG
T ss_pred EEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-Chh
Confidence 999987643 3455666662 2 454 399999999999874 654
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.76 E-value=5.6e-19 Score=142.66 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=84.3
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchh
Q 031359 47 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 126 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~ 126 (161)
+.+..+++++++++++++ +|||+|++.+|..||||||+|+|+.. .+........+++++|||||..+.
T Consensus 270 ~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA~~i~~~~----------~~~~~~~~l~~~~~~vvvy~~~~~- 337 (474)
T 3tp9_A 270 PERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGSLNIPWNK----------SFVTWAGWLLPADRPIHLLAADAI- 337 (474)
T ss_dssp CEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTCEECCSST----------THHHHHHHHCCSSSCEEEECCTTT-
T ss_pred CCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCeEEECcch----------HHHHHHHhcCCCCCeEEEEECCCc-
Confidence 445678999999998877 99999999999999999999999831 233333333477899999999876
Q ss_pred HHHHHHHHHHCCCcceeEecccHHHHhhCCCCCC
Q 031359 127 SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 160 (161)
Q Consensus 127 a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 160 (161)
+.++++.|+.+||++|+++.+|+.+|..+|.+++
T Consensus 338 ~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~ 371 (474)
T 3tp9_A 338 APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVA 371 (474)
T ss_dssp HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEE
T ss_pred HHHHHHHHHHcCCcceEEecCcHHHHHhcccccc
Confidence 5679999999999999986679999999887764
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.51 E-value=3.4e-14 Score=114.62 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=61.9
Q ss_pred CCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcce
Q 031359 63 AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 142 (161)
Q Consensus 63 ~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v 142 (161)
++++|||+|++.+|..||||||+|+|+. ..+..+....++++++||+||. +.++.++++.|+.+||++|
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~v 363 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYD----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYDDI 363 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSS----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCCCE
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCcc----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhcccc
Confidence 4578999999999999999999999983 1233333334678999999999 5688999999999999999
Q ss_pred eE-ecccHHHHh
Q 031359 143 TD-IAGGFAAWR 153 (161)
Q Consensus 143 ~~-l~GG~~~W~ 153 (161)
+. ++|+...|.
T Consensus 364 ~~~l~g~~~~~~ 375 (466)
T 3r2u_A 364 AGYQLPQSKIQT 375 (466)
T ss_dssp EEEECCC-----
T ss_pred cccccCcccccH
Confidence 96 677665543
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.24 E-value=3.3e-06 Score=58.11 Aligned_cols=84 Identities=18% Similarity=0.193 Sum_probs=53.8
Q ss_pred cCHHHHHHHHhCC-CEEEEcCChhh------------HhcC-CCCCcEEeccccccCCCCCCCHHHHHHHHhcC-CCCCe
Q 031359 52 VPVRVAHELLQAG-HRYLDVRTPEE------------FSAG-HATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDE 116 (161)
Q Consensus 52 i~~~~~~~~~~~~-~~liDvR~~~e------------~~~g-hIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ 116 (161)
++++++..+.+.+ ..|||+|++.| +..+ +|.|.+|+|.... ....+.+......+ ..+.+
T Consensus 30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~-----~~~~~~~~~~~~~l~~~~~p 104 (156)
T 2f46_A 30 LTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR-----DIQKHDVETFRQLIGQAEYP 104 (156)
T ss_dssp CCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT-----TCCHHHHHHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC-----CCCHHHHHHHHHHHHhCCCC
Confidence 4566777776666 57999997655 3334 5999999998421 12234444443333 24789
Q ss_pred EEEEeCCchhHHHHHHH-HHHCCCc
Q 031359 117 IIVGCQSGKRSMMAATD-LLNAGFA 140 (161)
Q Consensus 117 ivv~c~~g~~a~~~~~~-L~~~G~~ 140 (161)
|+|+|.+|.|+..++.. |...|..
T Consensus 105 VlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 105 VLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCC
Confidence 99999999988754443 2445653
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=94.85 E-value=0.053 Score=36.02 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=46.9
Q ss_pred CHHHHHHHHhCC-CEEEEcCChhhHhcCCCCC--cEEeccccccCCCCCCCHHHHHHHHhc----CCCCCeEEEEeCCch
Q 031359 53 PVRVAHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSGK 125 (161)
Q Consensus 53 ~~~~~~~~~~~~-~~liDvR~~~e~~~ghIpg--A~nip~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ivv~c~~g~ 125 (161)
+.++++.+.+.+ ..|||+|+..+......+| -+++|+.+. .....+.+...... +..+.+|+|.|..|.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~ 99 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDF----CPPAPDQIDRFVQIVDEANARGEAVGVHCALGF 99 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTT----SCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCC----CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 356677776667 5699999876544333444 345555322 11223333333222 345789999999884
Q ss_pred -hHH-HHHH-HHHHCCCc
Q 031359 126 -RSM-MAAT-DLLNAGFA 140 (161)
Q Consensus 126 -~a~-~~~~-~L~~~G~~ 140 (161)
|+. .++. .+...|++
T Consensus 100 ~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 100 GRTGTMLACYLVKERGLA 117 (150)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 665 3333 33445653
No 67
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=94.12 E-value=0.099 Score=34.61 Aligned_cols=83 Identities=13% Similarity=0.117 Sum_probs=44.9
Q ss_pred CHHHHHHHHhCC-CEEEEcCChhhHhcCCCCC--cEEeccccccCCCCCCCHHHHHHHHh----cCCCCCeEEEEeCCc-
Q 031359 53 PVRVAHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSG- 124 (161)
Q Consensus 53 ~~~~~~~~~~~~-~~liDvR~~~e~~~ghIpg--A~nip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ivv~c~~g- 124 (161)
+.+....+.+.+ ..|||+|+..++....+++ -.++|+.+.. ....+.+..... .+..+.+|+|.|..|
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~----~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~ 100 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC----PPAPDQIDRFVQIVDEANARGEAVGVHCALGF 100 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTC----CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCC----CCCHHHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence 456666666667 5699999875544333332 4556653211 122233332222 224578999999987
Q ss_pred hhHHH-HHHHHHHC-CC
Q 031359 125 KRSMM-AATDLLNA-GF 139 (161)
Q Consensus 125 ~~a~~-~~~~L~~~-G~ 139 (161)
.|+.. ++..|... |.
T Consensus 101 ~Rsg~~~~~~l~~~~~~ 117 (151)
T 2img_A 101 GRTGTMLACYLVKERGL 117 (151)
T ss_dssp SHHHHHHHHHHHHHHCC
T ss_pred ChHHHHHHHHHHHHhCc
Confidence 35543 33344433 65
No 68
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=93.97 E-value=0.14 Score=34.11 Aligned_cols=86 Identities=8% Similarity=-0.022 Sum_probs=45.0
Q ss_pred HHHHHHHHhCC-CEEEEcCChhhHhc-------CCCCCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeEEEEeCC
Q 031359 54 VRVAHELLQAG-HRYLDVRTPEEFSA-------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQS 123 (161)
Q Consensus 54 ~~~~~~~~~~~-~~liDvR~~~e~~~-------ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivv~c~~ 123 (161)
..++..+.+.+ ..|||+|+..+... ..| .-+++|......+......+.+.+.+..+ ..+.+|+|+|..
T Consensus 23 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi-~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~a 101 (151)
T 1xri_A 23 SANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGI-RLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKR 101 (151)
T ss_dssp HHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTC-EEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSS
T ss_pred ccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCC-eEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCC
Confidence 44555555556 57999998654321 112 13566653211111112333444444432 246799999998
Q ss_pred ch-hHHH-HHHHHHHCCCc
Q 031359 124 GK-RSMM-AATDLLNAGFA 140 (161)
Q Consensus 124 g~-~a~~-~~~~L~~~G~~ 140 (161)
|. |+.. ++..|...|+.
T Consensus 102 G~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 102 GKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp SSSHHHHHHHHHHHHTTBC
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 84 6554 44455566763
No 69
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=93.85 E-value=0.009 Score=41.46 Aligned_cols=22 Identities=18% Similarity=0.451 Sum_probs=20.1
Q ss_pred CEEEEcCChhhHhcCCCCCcEEeccc
Q 031359 65 HRYLDVRTPEEFSAGHATGAINVPYM 90 (161)
Q Consensus 65 ~~liDvR~~~e~~~ghIpgA~nip~~ 90 (161)
.++||||++.||. |||+|+|..
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg 143 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQL 143 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChh
Confidence 3899999999999 999999974
No 70
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=92.19 E-value=0.4 Score=33.89 Aligned_cols=83 Identities=20% Similarity=0.183 Sum_probs=43.1
Q ss_pred CHHHHHHHHhCC-CEEEEcCChhhHhcCCCC---------C--cEEeccccccCCCCCCCHHHHHHHHh----cCCCCCe
Q 031359 53 PVRVAHELLQAG-HRYLDVRTPEEFSAGHAT---------G--AINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDE 116 (161)
Q Consensus 53 ~~~~~~~~~~~~-~~liDvR~~~e~~~ghIp---------g--A~nip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ 116 (161)
..+++..+.+.+ ..|||+|+..|...-.++ | -+++|+.+.. ....+.+..... .+..+.+
T Consensus 60 ~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~~----~p~~~~~~~~~~~i~~~~~~~~~ 135 (212)
T 1fpz_A 60 VQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGG----TPDIASCCEIMEELTTCLKNYRK 135 (212)
T ss_dssp HHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTC----CCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCCC----CCCHHHHHHHHHHHHHHHhCCCC
Confidence 355566666556 579999998664332111 1 2455542211 112222222222 2335789
Q ss_pred EEEEeCCch-hHH-HHHHHHHH--CCC
Q 031359 117 IIVGCQSGK-RSM-MAATDLLN--AGF 139 (161)
Q Consensus 117 ivv~c~~g~-~a~-~~~~~L~~--~G~ 139 (161)
|+|+|..|. |+. .++..|.. .|.
T Consensus 136 VlVHC~aG~gRTg~~~a~~L~~~~~g~ 162 (212)
T 1fpz_A 136 TLIHSYGGLGRSCLVAACLLLYLSDTI 162 (212)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHCSSC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhccCC
Confidence 999999873 544 34444544 365
No 71
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=92.09 E-value=1.1 Score=33.70 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=23.2
Q ss_pred CCCcccCHHHHHHHHhCC-CEEEEcCChhhHh
Q 031359 47 GVPTSVPVRVAHELLQAG-HRYLDVRTPEEFS 77 (161)
Q Consensus 47 ~~~~~i~~~~~~~~~~~~-~~liDvR~~~e~~ 77 (161)
+.+..++++++..+.+-+ ..|||.|++.|..
T Consensus 51 ~~l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~ 82 (296)
T 1ywf_A 51 SELSRLDDAGRATLRRLGITDVADLRSSREVA 82 (296)
T ss_dssp SCCTTCCHHHHHHHHHHTCCEEEECCCHHHHH
T ss_pred CCcccCCHHHHHHHHhCCCCEEEECcChhhhh
Confidence 444567788888777667 5799999988754
No 72
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=92.00 E-value=0.22 Score=33.67 Aligned_cols=79 Identities=23% Similarity=0.333 Sum_probs=40.3
Q ss_pred HHHHHhCC-CEEEEcCChhhHhcCCCCC--cEEeccccccCCCCCCCHHHHHHHHh----cCCCCCeEEEEeCCc-hhHH
Q 031359 57 AHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSG-KRSM 128 (161)
Q Consensus 57 ~~~~~~~~-~~liDvR~~~e~~~ghIpg--A~nip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ivv~c~~g-~~a~ 128 (161)
...+.+.+ ..|||+|+..+.. ...| -+++|..+.... .....+..... .+..+.+|+|+|..| .|+.
T Consensus 30 ~~~L~~~gI~~Vi~l~~~~~~~--~~~~~~~~~ip~~D~~~~---~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 104 (164)
T 2hcm_A 30 TELLVRAGITLCVNVSRQQPGP--RAPGVAELRVPVFDDPAE---DLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSA 104 (164)
T ss_dssp HHHHHHTTEEEEEECSSSCCCC--CCTTCEEEECCCCSCTTS---CCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHH
T ss_pred HHHHHHCCCeEEEEcCCCCCCC--CCCCCEEEEEeCcCCCCc---hHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHH
Confidence 33444556 4699999854321 1122 345565321111 11112222211 223578999999998 6766
Q ss_pred H--HHHHHHHCCCc
Q 031359 129 M--AATDLLNAGFA 140 (161)
Q Consensus 129 ~--~~~~L~~~G~~ 140 (161)
. ++..+...|+.
T Consensus 105 ~~~~ayLm~~~~~~ 118 (164)
T 2hcm_A 105 AVCTAYLMRHRGHS 118 (164)
T ss_dssp HHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCCC
Confidence 3 34556666763
No 73
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=91.90 E-value=0.3 Score=32.25 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=40.2
Q ss_pred HHHHHhCC-CEEEEcCChhhHhcCCCCC---cEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEeCCc-hhHHH-
Q 031359 57 AHELLQAG-HRYLDVRTPEEFSAGHATG---AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM- 129 (161)
Q Consensus 57 ~~~~~~~~-~~liDvR~~~e~~~ghIpg---A~nip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~a~~- 129 (161)
+..+.+.+ ..|||+++..+ ...++ -.++|..+......... .+.++.....+..+.+|+|+|..| .||..
T Consensus 22 ~~~L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 22 LEDLQNRGVRYILNVTREID---NFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp HHHHHHTTEEEEEECCSSSC---CSCBTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHCCCCEEEEeCCCCc---cCCCCCcEEEEEEEeCCCCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 44444556 46999997532 11232 24666532211111100 111111212223578999999998 67653
Q ss_pred -HHHHHHHCCC
Q 031359 130 -AATDLLNAGF 139 (161)
Q Consensus 130 -~~~~L~~~G~ 139 (161)
++..+...|+
T Consensus 99 v~ayLm~~~~~ 109 (145)
T 2nt2_A 99 VIAYAMKEYGW 109 (145)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhCC
Confidence 3455555665
No 74
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=91.21 E-value=0.41 Score=32.17 Aligned_cols=81 Identities=11% Similarity=0.108 Sum_probs=39.4
Q ss_pred HHHHHhCC-CEEEEcCChhhHhcCCCCC--cEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEeCCc-hhHHH--
Q 031359 57 AHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM-- 129 (161)
Q Consensus 57 ~~~~~~~~-~~liDvR~~~e~~~ghIpg--A~nip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~a~~-- 129 (161)
...+.+.+ ..|||+|+..+.. ..| -+++|+.+......... ...++.+...+..+.+|+|+|..| .|+..
T Consensus 26 ~~~L~~~gI~~Vi~l~~~~~~~---~~~i~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~ 102 (160)
T 1yz4_A 26 LDQLGRNKITHIISIHESPQPL---LQDITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIV 102 (160)
T ss_dssp HHHHHHTTCCEEEEECSSCCCC---CTTCEEEEECCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHH
T ss_pred HHHHHHCCCeEEEEccCCCCCc---cCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHH
Confidence 33444456 5699999754321 122 24566532211111100 111111111223578999999998 67653
Q ss_pred HHHHHHHCCCc
Q 031359 130 AATDLLNAGFA 140 (161)
Q Consensus 130 ~~~~L~~~G~~ 140 (161)
++..+...|+.
T Consensus 103 ~aylm~~~~~~ 113 (160)
T 1yz4_A 103 TAYVMTVTGLG 113 (160)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHcCCC
Confidence 34444556653
No 75
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=90.38 E-value=0.52 Score=31.89 Aligned_cols=82 Identities=16% Similarity=0.189 Sum_probs=39.2
Q ss_pred HHHHHhCC-CEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEeCCc-hhHHH--HH
Q 031359 57 AHELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--AA 131 (161)
Q Consensus 57 ~~~~~~~~-~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~a~~--~~ 131 (161)
...+.+.+ ..|||+|+..+-...++ .-+++|..+......... .+.++.+......+.+|+|+|..| .||.. ++
T Consensus 25 ~~~L~~~gI~~Vi~l~~~~~~~~~~i-~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~a 103 (165)
T 1wrm_A 25 AEQLSKNKVTHILSVHDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIA 103 (165)
T ss_dssp HHHHHHTTEEEEEECSTTCCCCSTTC-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHH
T ss_pred HHHHHHCCCcEEEEecCCCCCCCCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHH
Confidence 33444456 46999997543211111 124566532211111100 111111111123578999999988 67665 34
Q ss_pred HHHHHCCC
Q 031359 132 TDLLNAGF 139 (161)
Q Consensus 132 ~~L~~~G~ 139 (161)
..+...|+
T Consensus 104 yLm~~~~~ 111 (165)
T 1wrm_A 104 YIMTVTDF 111 (165)
T ss_dssp HHHHTSSC
T ss_pred HHHHHcCC
Confidence 44555565
No 76
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=90.14 E-value=0.75 Score=31.73 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=32.7
Q ss_pred HHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 104 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 104 ~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
+..++....++.+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 36 L~~ll~~~~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 81 (185)
T 2jgn_A 36 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 81 (185)
T ss_dssp HHHHHHHC-CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC----
T ss_pred HHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCC
Confidence 3344444545678999999988999999999999984 778888874
No 77
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=90.13 E-value=1.1 Score=29.67 Aligned_cols=84 Identities=13% Similarity=0.050 Sum_probs=41.2
Q ss_pred HHHHHHhCC-CEEEEcCChhhHhc--CCCC-C--cEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEeCCc-hhH
Q 031359 56 VAHELLQAG-HRYLDVRTPEEFSA--GHAT-G--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRS 127 (161)
Q Consensus 56 ~~~~~~~~~-~~liDvR~~~e~~~--ghIp-g--A~nip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~a 127 (161)
++..+.+.+ ..|||+|+..+... -..+ | -+++|..+......... ....+.....+..+.+|+|+|..| .|+
T Consensus 25 d~~~L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS 104 (154)
T 2r0b_A 25 KLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRS 104 (154)
T ss_dssp GHHHHHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred cHHHHHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChH
Confidence 344454556 57999998765321 1122 2 24566532211111100 111111111123578999999998 576
Q ss_pred HH-H-HHHHHHCCC
Q 031359 128 MM-A-ATDLLNAGF 139 (161)
Q Consensus 128 ~~-~-~~~L~~~G~ 139 (161)
.. + +..+...|.
T Consensus 105 ~~~~~ayl~~~~~~ 118 (154)
T 2r0b_A 105 AAFVIAYIMETFGM 118 (154)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCC
Confidence 64 3 344455665
No 78
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=89.91 E-value=1.4 Score=28.85 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=38.8
Q ss_pred HHHHhCC-CEEEEcCChhhH-hcCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEeCCc-hhHH-H-HH
Q 031359 58 HELLQAG-HRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSM-M-AA 131 (161)
Q Consensus 58 ~~~~~~~-~~liDvR~~~e~-~~ghIpgA~nip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~a~-~-~~ 131 (161)
..+.+.+ ..||++++.... ...++ .-.++|+.+......... .+.++.+......+.+|+|.|..| .||. . ++
T Consensus 23 ~~L~~~gI~~Vi~l~~~~~~~~~~~~-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~a 101 (144)
T 3ezz_A 23 DMLDALGITALLNVSSDCPNHFEGHY-QYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLA 101 (144)
T ss_dssp HHHHHTTCCEEEECSSSCCCTTTTTS-EEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHH
T ss_pred HHHHHCCCeEEEEccCCCCccCCCCc-eEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHH
Confidence 3444556 579999974221 11111 234566643222222111 122222222234567999999988 3655 3 33
Q ss_pred HHHHHCCC
Q 031359 132 TDLLNAGF 139 (161)
Q Consensus 132 ~~L~~~G~ 139 (161)
..+...|+
T Consensus 102 ylm~~~~~ 109 (144)
T 3ezz_A 102 YLMMKKRV 109 (144)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 34445665
No 79
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=89.44 E-value=0.51 Score=31.30 Aligned_cols=81 Identities=12% Similarity=0.097 Sum_probs=41.6
Q ss_pred HHHHH-HhCC-CEEEEcCChhhHhcC----------CCCCcEEeccccccCCCCCCCHHHHHHHHh----cCCCCCeEEE
Q 031359 56 VAHEL-LQAG-HRYLDVRTPEEFSAG----------HATGAINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIV 119 (161)
Q Consensus 56 ~~~~~-~~~~-~~liDvR~~~e~~~g----------hIpgA~nip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ivv 119 (161)
+..++ .+.+ ..|||+|+..+.... .| .-+++|..+.. .....+.+..... .+..+.+|+|
T Consensus 19 ~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi-~~~~~p~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~vlV 94 (157)
T 3rgo_A 19 MTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGV-EQLRLSTVDMT---GVPTLANLHKGVQFALKYQALGQCVYV 94 (157)
T ss_dssp GHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTC-EEEEECCCTTT---SSCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHcCCCEEEECccccccccccCCHHHHHHCCC-eEEEecCCCCC---CCChHHHHHHHHHHHHHHHHCCCEEEE
Confidence 34444 3456 469999987554211 11 23456653221 1122233333222 2345679999
Q ss_pred EeCCch-hHHHH--HHHHHHCCCc
Q 031359 120 GCQSGK-RSMMA--ATDLLNAGFA 140 (161)
Q Consensus 120 ~c~~g~-~a~~~--~~~L~~~G~~ 140 (161)
+|..|. |+..+ +..+...|.+
T Consensus 95 HC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 95 HCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp ESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCChHHHHHHHHHHHHcCCC
Confidence 999885 66643 3344445653
No 80
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=88.84 E-value=0.95 Score=31.38 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=39.5
Q ss_pred HHHHhCC-CEEEEcCChhhHhcCCCCC--cEEeccccccCCCCCC-CHHHHHHHHhcCCCCCeEEEEeCCc-hhHHH--H
Q 031359 58 HELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTK-NLKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--A 130 (161)
Q Consensus 58 ~~~~~~~-~~liDvR~~~e~~~ghIpg--A~nip~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ivv~c~~g-~~a~~--~ 130 (161)
..+.+.+ ..||+++...+ ....+| -+++|..+........ ....++.+...+..+.+|+|+|..| .||.. +
T Consensus 39 ~~L~~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ 116 (188)
T 2esb_A 39 LMLSSNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCL 116 (188)
T ss_dssp HHHHHTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHH
T ss_pred HHHHHCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCCccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHH
Confidence 3344456 56999997432 112233 2455653211111110 0111111111223578999999998 67663 3
Q ss_pred HHHHHHCCCc
Q 031359 131 ATDLLNAGFA 140 (161)
Q Consensus 131 ~~~L~~~G~~ 140 (161)
+..+...|+.
T Consensus 117 ayLm~~~~~s 126 (188)
T 2esb_A 117 AYLMKYHAMS 126 (188)
T ss_dssp HHHHHHSCCC
T ss_pred HHHHHHcCCC
Confidence 4555666753
No 81
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=88.70 E-value=0.94 Score=31.48 Aligned_cols=81 Identities=17% Similarity=0.149 Sum_probs=39.4
Q ss_pred HHHHHhCC-CEEEEcCChhhHhcCCCCC--cEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEeCCc-hhHHH--
Q 031359 57 AHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM-- 129 (161)
Q Consensus 57 ~~~~~~~~-~~liDvR~~~e~~~ghIpg--A~nip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~a~~-- 129 (161)
...+.+.+ ..|||+|+..+ ....+| -+++|+.+......... ...++.+...+..+.+|+|+|..| .|+..
T Consensus 44 ~~~L~~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv 121 (190)
T 2wgp_A 44 RHLLQARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLC 121 (190)
T ss_dssp HHHHHHTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHH
T ss_pred HHHHHHCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCCCHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHH
Confidence 33444556 57999997432 112233 24556532211111100 111111111123578899999988 67653
Q ss_pred HHHHHHHCCC
Q 031359 130 AATDLLNAGF 139 (161)
Q Consensus 130 ~~~~L~~~G~ 139 (161)
++..+...|+
T Consensus 122 ~ayLm~~~~~ 131 (190)
T 2wgp_A 122 IAYLMKFHNV 131 (190)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHcCC
Confidence 3455565665
No 82
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=86.78 E-value=2.6 Score=28.99 Aligned_cols=87 Identities=20% Similarity=0.240 Sum_probs=42.8
Q ss_pred CCcccCHHHHHHHH-hCC-CEEEEcCChhh----HhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc------CCCCC
Q 031359 48 VPTSVPVRVAHELL-QAG-HRYLDVRTPEE----FSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR------FRKHD 115 (161)
Q Consensus 48 ~~~~i~~~~~~~~~-~~~-~~liDvR~~~e----~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~------l~~~~ 115 (161)
.|...+.++..+.+ +.+ ..||+++++.+ +..-+| .-+++|+.+ ......+.+...... ..++.
T Consensus 44 ~P~~~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i-~~~~~pi~d----~~~~~~~~~~~~~~~i~~~~~~~~~~ 118 (189)
T 3rz2_A 44 NPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDD----GAPPSNQIVDDWLSLVKIKFREEPGC 118 (189)
T ss_dssp CCCTTTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC-EEEECCCCS----SSCCCSHHHHHHHHHHHHHHHHSTTC
T ss_pred CCCcccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc-EEEEecCCC----CCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 33345555554444 445 56999997532 222222 123455321 111222222322222 24678
Q ss_pred eEEEEeCCc-hhHH-HHHHHHHHCCC
Q 031359 116 EIIVGCQSG-KRSM-MAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g-~~a~-~~~~~L~~~G~ 139 (161)
+|+|.|..| .|+. .++..|...|+
T Consensus 119 ~VlVHC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 119 CIAVHCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHTTTC
T ss_pred cEEEECCCCCCHHHHHHHHHHHHcCC
Confidence 999999987 3544 44445555565
No 83
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=86.50 E-value=1 Score=32.04 Aligned_cols=28 Identities=25% Similarity=0.329 Sum_probs=19.3
Q ss_pred CCCCeEEEEeCCc-hhHHH--HHHHHHHCCC
Q 031359 112 RKHDEIIVGCQSG-KRSMM--AATDLLNAGF 139 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~--~~~~L~~~G~ 139 (161)
..+.+|+|+|..| .|+.. ++..++..|+
T Consensus 81 ~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 81 EKGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp HTTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred hcCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 4578999999988 57653 3455555565
No 84
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=86.36 E-value=2 Score=28.50 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=18.1
Q ss_pred CCCeEEEEeCCc-hhHH-HHHHHHHHC-CCc
Q 031359 113 KHDEIIVGCQSG-KRSM-MAATDLLNA-GFA 140 (161)
Q Consensus 113 ~~~~ivv~c~~g-~~a~-~~~~~L~~~-G~~ 140 (161)
++.+|+|.|..| .|+. .++..|... |++
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 378999999987 3443 444455554 653
No 85
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=85.74 E-value=1.4 Score=30.13 Aligned_cols=26 Identities=23% Similarity=0.465 Sum_probs=17.5
Q ss_pred CCeEEEEeCCc-hhHHH-H-HHHHHHCCC
Q 031359 114 HDEIIVGCQSG-KRSMM-A-ATDLLNAGF 139 (161)
Q Consensus 114 ~~~ivv~c~~g-~~a~~-~-~~~L~~~G~ 139 (161)
+.+|+|+|..| .|+.. + +..+...|+
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 68999999988 36554 3 334455665
No 86
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=85.30 E-value=2.2 Score=27.88 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=37.7
Q ss_pred HHHHhCC-CEEEEcCChhhHhcCCCCC--cEEeccccccCCCCCC-CHHHHHHHHhcCCCCCeEEEEeCCch-hHHH--H
Q 031359 58 HELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTK-NLKFVEEVSTRFRKHDEIIVGCQSGK-RSMM--A 130 (161)
Q Consensus 58 ~~~~~~~-~~liDvR~~~e~~~ghIpg--A~nip~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ivv~c~~g~-~a~~--~ 130 (161)
..+.+.+ ..||+++...+ .....+ -.++|..+........ ..+.++.+...+..+.+|+|.|..|. ||.. +
T Consensus 23 ~~L~~~gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ 100 (144)
T 3s4e_A 23 DTLKKNKVTHILNVAYGVE--NAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVI 100 (144)
T ss_dssp HHHHHTTCCEEEECSSSCC--CCCTTTSEEEECCCCCCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHH
T ss_pred HHHHHcCCCEEEEccCCCC--CCCCCCCEEEEEeccCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHH
Confidence 3444556 56999986322 111112 2456653222111111 11112222222345778999999883 6543 3
Q ss_pred HHHHHHCCC
Q 031359 131 ATDLLNAGF 139 (161)
Q Consensus 131 ~~~L~~~G~ 139 (161)
+..+...|+
T Consensus 101 ayLm~~~~~ 109 (144)
T 3s4e_A 101 GFLMNSEQT 109 (144)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHcCC
Confidence 444455665
No 87
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=84.80 E-value=2.1 Score=28.88 Aligned_cols=36 Identities=14% Similarity=0.400 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+..+++|+|++-..+..++..|...|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 356899999999999999999999998 477888885
No 88
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=83.50 E-value=2.6 Score=28.47 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=33.9
Q ss_pred HHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 105 EEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 105 ~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..++... +..+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 23 ~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 66 (172)
T 1t5i_A 23 FDLLDVL-EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 66 (172)
T ss_dssp HHHHHHS-CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHHHHhC-CCCcEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCCC
Confidence 3334434 3567899999999999999999999984 778888863
No 89
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=82.80 E-value=3.1 Score=27.70 Aligned_cols=45 Identities=13% Similarity=0.307 Sum_probs=34.2
Q ss_pred HHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 104 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 104 ~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
+..+.... +..+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 21 l~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 65 (165)
T 1fuk_A 21 LTDLYDSI-SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 65 (165)
T ss_dssp HHHHHHHT-TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHHHHHhC-CCCCEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 33444444 3467889999989999999999999984 778888853
No 90
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=82.33 E-value=1.8 Score=28.91 Aligned_cols=36 Identities=22% Similarity=0.439 Sum_probs=30.7
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 35 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 70 (163)
T 2hjv_A 35 PDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGMI 70 (163)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 457899999999999999999999984 778888863
No 91
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=82.29 E-value=7.9 Score=27.40 Aligned_cols=28 Identities=29% Similarity=0.489 Sum_probs=19.3
Q ss_pred CCCCeEEEEeCCc-hhHHH--HHHHHHHCCC
Q 031359 112 RKHDEIIVGCQSG-KRSMM--AATDLLNAGF 139 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~--~~~~L~~~G~ 139 (161)
..+.+|+|+|..| .||.. ++..+...|+
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4578999999988 56653 3445566665
No 92
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=79.95 E-value=9 Score=27.82 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=24.0
Q ss_pred CeEEEEeCCch---hHHHHHHHHHHCCCcceeEe
Q 031359 115 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 115 ~~ivv~c~~g~---~a~~~~~~L~~~G~~~v~~l 145 (161)
++|+|+|+.|+ .+-.+|+.|...||+ |.++
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 91 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVF 91 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999999874 566899999999995 6543
No 93
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=79.62 E-value=4.2 Score=31.04 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=37.1
Q ss_pred HHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 103 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 103 ~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
.+.........+.+++|+|++-..+..++..|...|+ ++..+.|++.
T Consensus 265 ~l~~~l~~~~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 265 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 311 (417)
T ss_dssp HHHHHHHTCCTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred HHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCCC
Confidence 3444455555678899999998899999999999998 4888888764
No 94
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=78.65 E-value=8.9 Score=26.72 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=18.8
Q ss_pred CCCeEEEEeCCc-hhHHH--HHHHHHHCCC
Q 031359 113 KHDEIIVGCQSG-KRSMM--AATDLLNAGF 139 (161)
Q Consensus 113 ~~~~ivv~c~~g-~~a~~--~~~~L~~~G~ 139 (161)
.+.+|+|.|..| .||.. ++..+...|.
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENM 159 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCC
Confidence 577899999988 57653 3445556665
No 95
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=78.32 E-value=5.6 Score=27.54 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=18.3
Q ss_pred CCCCeEEEEeCCc-hhHHHH--HHHHHHCCCc
Q 031359 112 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGFA 140 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~~--~~~L~~~G~~ 140 (161)
..+.+|+|.|..| .|+..+ +..+...|..
T Consensus 123 ~~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 123 QRNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred HcCCcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 3568999999988 565533 3333445654
No 96
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=77.92 E-value=6.1 Score=25.70 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=31.7
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHh
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWR 153 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~ 153 (161)
+++-+|+++.++..........|+..||..|.....|..++.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 455578888777666667888999999977776777777764
No 97
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=77.91 E-value=4.5 Score=27.06 Aligned_cols=29 Identities=7% Similarity=0.242 Sum_probs=19.3
Q ss_pred CCCCeEEEEeCCc-hhHH--HHHHHHHHCCCc
Q 031359 112 RKHDEIIVGCQSG-KRSM--MAATDLLNAGFA 140 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~--~~~~~L~~~G~~ 140 (161)
..+.+|+|.|..| .||. .++..+...|+.
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 3568999999988 4654 344555666653
No 98
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=77.34 E-value=4.7 Score=33.13 Aligned_cols=37 Identities=24% Similarity=0.230 Sum_probs=32.6
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
++..+||||.+-..+..++..|...|+ ++..|.||+.
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~-~~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGI-HAGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 567899999999999999999999998 4888999873
No 99
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=77.34 E-value=3.8 Score=27.02 Aligned_cols=23 Identities=22% Similarity=0.123 Sum_probs=15.9
Q ss_pred HHHHHHHHhCC-CEEEEcCChhhH
Q 031359 54 VRVAHELLQAG-HRYLDVRTPEEF 76 (161)
Q Consensus 54 ~~~~~~~~~~~-~~liDvR~~~e~ 76 (161)
.+++..+.+.+ ..|||+|+..|.
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e~ 41 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWEI 41 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHHH
T ss_pred HHHHHHHHHCCCCEEEEcCchhhh
Confidence 45566665556 579999998654
No 100
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=76.63 E-value=4.1 Score=29.93 Aligned_cols=30 Identities=10% Similarity=0.182 Sum_probs=23.7
Q ss_pred CeEEEEeCCch---hHHHHHHHHHHCCCcceeEe
Q 031359 115 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 115 ~~ivv~c~~g~---~a~~~~~~L~~~G~~~v~~l 145 (161)
.+|+|+|+.|+ .+..+|+.|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 57999999864 566899999999995 5543
No 101
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=76.55 E-value=4.2 Score=27.55 Aligned_cols=28 Identities=18% Similarity=0.213 Sum_probs=18.7
Q ss_pred CCCeEEEEeCCc-hhHHH--HHHHHHHCCCc
Q 031359 113 KHDEIIVGCQSG-KRSMM--AATDLLNAGFA 140 (161)
Q Consensus 113 ~~~~ivv~c~~g-~~a~~--~~~~L~~~G~~ 140 (161)
.+.+|+|+|..| .||.. ++..+...|..
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 467999999988 56543 34455555654
No 102
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=76.09 E-value=4.1 Score=30.70 Aligned_cols=30 Identities=10% Similarity=0.182 Sum_probs=23.8
Q ss_pred CeEEEEeCCch---hHHHHHHHHHHCCCcceeEe
Q 031359 115 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 115 ~~ivv~c~~g~---~a~~~~~~L~~~G~~~v~~l 145 (161)
.+|+|+|+.|+ .+..+|+.|...||+ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 57999999864 566899999999995 6543
No 103
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=75.05 E-value=4.5 Score=29.84 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=23.9
Q ss_pred CeEEEEeCCch---hHHHHHHHHHHCCCcceeEe
Q 031359 115 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 115 ~~ivv~c~~g~---~a~~~~~~L~~~G~~~v~~l 145 (161)
++|+|+|+.|+ .+-.+|+.|...||+ |.++
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIY 112 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 58999999864 566899999999995 6543
No 104
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=74.35 E-value=8.9 Score=24.17 Aligned_cols=92 Identities=17% Similarity=0.209 Sum_probs=49.6
Q ss_pred CcccCHHHHHHHHhCCCEEE-EcCChhhHh-cCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCc--
Q 031359 49 PTSVPVRVAHELLQAGHRYL-DVRTPEEFS-AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 124 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~li-DvR~~~e~~-~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g-- 124 (161)
+..+|....+.+.+.+.++. |.+...++. .-.+++..-+.+. .....+..+.+.+.+..++.|++.+..|
T Consensus 18 ~~~lT~~a~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~V~~l~d~GdP 91 (117)
T 3hh1_A 18 LDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYH------SFNEERAVRQVIELLEEGSDVALVTDAGTP 91 (117)
T ss_dssp GGGSCHHHHHHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECC------STTHHHHHHHHHHHHHTTCCEEEEEETTSC
T ss_pred HHHhhHHHHHHHHhCCEEEEecCchHHHHHHHhCCCCCEEeccC------CccHHHHHHHHHHHHHCCCeEEEEecCCcC
Confidence 44678887777766776666 444433333 2234443222221 1111233444455555567788887333
Q ss_pred ---hhHHHHHHHHHHCCCcceeEecc
Q 031359 125 ---KRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 125 ---~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.........+++.|++ +.++.|
T Consensus 92 ~i~~~~~~l~~~~~~~gi~-v~viPG 116 (117)
T 3hh1_A 92 AISDPGYTMASAAHAAGLP-VVPVPG 116 (117)
T ss_dssp GGGSTTHHHHHHHHHTTCC-EEEEC-
T ss_pred eEeccHHHHHHHHHHCCCc-EEEeCC
Confidence 2445666777888985 777765
No 105
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=73.29 E-value=5.1 Score=27.59 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=30.2
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 456999999988999999999999985 777888853
No 106
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=73.25 E-value=3.8 Score=28.69 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=30.6
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 31 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~~ 66 (212)
T 3eaq_A 31 PDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDLS 66 (212)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSSC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 568999999988888999999999984 778888853
No 107
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=70.57 E-value=20 Score=23.69 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=45.0
Q ss_pred ccCHHHHHHHHhCC-CEEEEcCChhhHh----------cCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeE
Q 031359 51 SVPVRVAHELLQAG-HRYLDVRTPEEFS----------AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEI 117 (161)
Q Consensus 51 ~i~~~~~~~~~~~~-~~liDvR~~~e~~----------~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~i 117 (161)
.++.+.++.+.+.| -++|+.|+..+-. ... -..+++|.+ + .....+.+......+ ..+++|
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G-~~~~~i~~D-v----~~~~~~~v~~~~~~i~~~~G~dV 100 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG-MDYVYIPVD-W----QNPKVEDVEAFFAAMDQHKGKDV 100 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT-CEEEECCCC-T----TSCCHHHHHHHHHHHHHTTTSCE
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC-CeEEEecCC-C----CCCCHHHHHHHHHHHHhcCCCCE
Confidence 45678888888888 4678888654321 111 124566652 1 111224444444332 113389
Q ss_pred EEEeCCchhHHH-HHHHHHHCCCc
Q 031359 118 IVGCQSGKRSMM-AATDLLNAGFA 140 (161)
Q Consensus 118 vv~c~~g~~a~~-~~~~L~~~G~~ 140 (161)
+|.|.++.+... .+..+...|..
T Consensus 101 LVnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 101 LVHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp EEECSBSHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCHHHHHHHHHHHcCCC
Confidence 999998765443 33344456653
No 108
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=68.16 E-value=7.1 Score=25.43 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=19.3
Q ss_pred CCCCeEEEEeCCc-hhHHHH--HHHHHHCCC
Q 031359 112 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGF 139 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~~--~~~L~~~G~ 139 (161)
..+.+|+|+|..| .|+..+ +..+...|.
T Consensus 81 ~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred HcCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 3578999999988 676643 344555675
No 109
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=67.51 E-value=8 Score=27.46 Aligned_cols=30 Identities=30% Similarity=0.340 Sum_probs=25.1
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEe
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l 145 (161)
-.+-++|.+. +||..+-..|.+.|| +|..+
T Consensus 26 Lr~avVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 56 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAHNILSKRGF-SVRSF 56 (214)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred CeEEEECCCCcchhHHHHHHHHHCCC-ceEee
Confidence 3578899876 899999999999999 57655
No 110
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=67.28 E-value=5.7 Score=31.99 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
++..++|||++-..+..++..|...|+ ++..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~-~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGI-SAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 456899999999999999999999998 4888999874
No 111
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=67.26 E-value=23 Score=26.34 Aligned_cols=106 Identities=10% Similarity=0.179 Sum_probs=62.1
Q ss_pred CCcccCHHHHHHHHhCCCEEE-EcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCc--
Q 031359 48 VPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~li-DvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g-- 124 (161)
.+..+|...++.+.+.++++. |.|.........-+++.-+++.. ....+....+...+..++.|++++++|
T Consensus 27 ~~~~lT~rA~~~L~~aDvI~~edtr~~~~lL~~~~~~~~~i~~~~------~~~~~~~~~li~~l~~G~~Va~lsdaGdP 100 (296)
T 3kwp_A 27 NLDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEITTKQISFHE------HNTQERIPQLIAKLKQGMQIAQVSDAGMP 100 (296)
T ss_dssp CGGGCCHHHHHHHHHSSEEEESCHHHHHHHHHHTTCCCEEEECST------TTHHHHHHHHHHHHHTTCEEEEECSSBCT
T ss_pred CccchhhHHHHHHhHhhhhhhhccccHHHHhhheeeeeeeeehhh------cchhhHhHHHHHHHhcCceEEEeccCCCC
Confidence 345788888887777788888 77754443321112333333310 011234445555555677888887544
Q ss_pred ---hhHHHHHHHHHHCCCcceeEeccc---HHHHhhCCCCCC
Q 031359 125 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPTE 160 (161)
Q Consensus 125 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~~ 160 (161)
.........+.+.|++ |.++.|= ..+....|.|++
T Consensus 101 ~i~~~g~~lv~~~~~~gi~-v~viPGiSA~~aA~a~~Glp~~ 141 (296)
T 3kwp_A 101 SISDPGHELVNACIDAHIP-VVPLPGANAGLTALIASGLAPQ 141 (296)
T ss_dssp TSSHHHHHHHHHHHHTTCC-EEECCCCCHHHHHHHHHSSCCS
T ss_pred CCCCCchHHHHHHHHcCCC-eeeCCCcccchHHHHhccCCCC
Confidence 3555677788888985 7777773 234555677653
No 112
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=66.28 E-value=8.3 Score=25.11 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=19.7
Q ss_pred CCCeEEEEeCCc-hhHH-H-HHHHHHHCCCc
Q 031359 113 KHDEIIVGCQSG-KRSM-M-AATDLLNAGFA 140 (161)
Q Consensus 113 ~~~~ivv~c~~g-~~a~-~-~~~~L~~~G~~ 140 (161)
.+.+|+|+|..| .|+. . ++..+...|+.
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999998 6766 3 34455666753
No 113
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=66.25 E-value=13 Score=25.32 Aligned_cols=46 Identities=17% Similarity=0.216 Sum_probs=34.4
Q ss_pred HHHHhcCCCCCeEEEEeCCc--hhHHHHHHHHHH---CCCcceeEecccHH
Q 031359 105 EEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGFA 150 (161)
Q Consensus 105 ~~~~~~l~~~~~ivv~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~~ 150 (161)
+.+...++++..+|+.+-.| ..|...|..|.. .|..++..+-||-.
T Consensus 65 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 65 QRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 34566678788888888777 467788887766 68778988888854
No 114
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=65.83 E-value=8.4 Score=28.75 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=30.2
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
..+++|+|++-..+..++..|...|+. +..+.|++
T Consensus 28 ~~~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l 62 (300)
T 3i32_A 28 PDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDM 62 (300)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCC
T ss_pred CCCEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 668999999988888999999999984 77888885
No 115
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=65.68 E-value=6.7 Score=25.91 Aligned_cols=28 Identities=18% Similarity=0.223 Sum_probs=18.8
Q ss_pred CCCCeEEEEeCCc-hhHHHH--HHHHHHCCC
Q 031359 112 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGF 139 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~~--~~~L~~~G~ 139 (161)
..+.+|+|+|..| .||..+ +..++..|+
T Consensus 83 ~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 83 SQNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred HcCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 3578999999998 676633 334445565
No 116
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=64.97 E-value=12 Score=27.43 Aligned_cols=76 Identities=11% Similarity=0.040 Sum_probs=44.3
Q ss_pred CEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcce
Q 031359 65 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 142 (161)
Q Consensus 65 ~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v 142 (161)
-++|.|.+.+|.+..--.|+--|-..+-.-..+..+.+....+...++.+. ++++.+|..+..-...|+..|++.+
T Consensus 155 ~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~--~~VsESGI~t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 155 EPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNV--VKVAKLGISERNEIEELRKLGVNAF 230 (258)
T ss_dssp CCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTS--EEEEEESSCCHHHHHHHHHTTCCEE
T ss_pred HHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCC--EEEEcCCCCCHHHHHHHHHCCCCEE
Confidence 467888887776532112222121111111122234455666667777554 5567899888888889999999754
No 117
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=64.55 E-value=15 Score=29.69 Aligned_cols=46 Identities=17% Similarity=0.335 Sum_probs=31.5
Q ss_pred CCCeEEEEeCCch---hHHHHHHHHHHCCCcceeEe-ccc---------HHHHhhCCCCC
Q 031359 113 KHDEIIVGCQSGK---RSMMAATDLLNAGFAGITDI-AGG---------FAAWRQNGLPT 159 (161)
Q Consensus 113 ~~~~ivv~c~~g~---~a~~~~~~L~~~G~~~v~~l-~GG---------~~~W~~~g~p~ 159 (161)
+.++|+|+|+.|+ .+..+|+.|...||+ |.++ .+. +..|++.|.++
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~ 109 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKV 109 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEECCCCCHHHHHHHHHHHhCCCce
Confidence 4678999999874 456788999999995 5533 221 34566666543
No 118
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=62.75 E-value=16 Score=27.36 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=30.9
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+..+++|+|++-..+..++..|...|+. +..+.|++
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 284 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGM 284 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 4568999999988999999999999985 77788875
No 119
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=62.17 E-value=11 Score=25.81 Aligned_cols=49 Identities=18% Similarity=0.210 Sum_probs=35.0
Q ss_pred CCCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe------cccHHHHhhCCCCCC
Q 031359 112 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI------AGGFAAWRQNGLPTE 160 (161)
Q Consensus 112 ~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l------~GG~~~W~~~g~p~~ 160 (161)
.+++.|+++.+ +|.....++..|++.|-+.|.++ .+|-+...+.|+|+.
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~ 169 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYR 169 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEE
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEE
Confidence 45788988875 68888889999999998765532 245555555677753
No 120
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=62.08 E-value=50 Score=25.13 Aligned_cols=81 Identities=12% Similarity=0.121 Sum_probs=41.2
Q ss_pred HHHHHHHHhCC-CEEEEcCCh----hhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC-CCCCeEEEEeCCc-hh
Q 031359 54 VRVAHELLQAG-HRYLDVRTP----EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEIIVGCQSG-KR 126 (161)
Q Consensus 54 ~~~~~~~~~~~-~~liDvR~~----~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivv~c~~g-~~ 126 (161)
.+.+..+.+.+ ..|||+|+. ..+....| .-+++|+.+ ......+.+......+ ..+.+|+|.|..| .|
T Consensus 208 ~~~~~~L~~~GI~~VInL~~~~y~~~~~~~~gi-~~~~ipi~D----~~~P~~~~~~~fi~~~~~~~~~VLVHC~aG~gR 282 (348)
T 1ohe_A 208 ETYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGF-DHHDLFFAD----GSTPTDAIVKEFLDICENAEGAIAVHSKAGLGR 282 (348)
T ss_dssp HHHHHHHHHTTEEEEEECSCCSSCTHHHHTTTC-EEEECCCCT----TCCCCHHHHHHHHHHHHSCSSEEEEECSSSSHH
T ss_pred HHHHHHHHHcCCCEEEECCCCcCChhhhhcCCc-EEEEecCCC----CCCCCHHHHHHHHHHHHhCCCcEEEECCCCCCh
Confidence 34455555556 469999964 22332211 124555532 1112233333333332 4578999999988 55
Q ss_pred HHH-HHHHHHH-CCC
Q 031359 127 SMM-AATDLLN-AGF 139 (161)
Q Consensus 127 a~~-~~~~L~~-~G~ 139 (161)
+.. ++..|.. .|+
T Consensus 283 TGtvvaayLm~~~g~ 297 (348)
T 1ohe_A 283 TGTLIACYIMKHYRM 297 (348)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCC
Confidence 543 3333433 565
No 121
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=61.98 E-value=12 Score=31.06 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=33.6
Q ss_pred HHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 107 VSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 107 ~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+...+..+..++|+|.+-.++..++..|...|+ ++..+.|++
T Consensus 438 l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 479 (661)
T 2d7d_A 438 IQARIERNERVLVTTLTKKMSEDLTDYLKEIGI-KVNYLHSEI 479 (661)
T ss_dssp HHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred HHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCC-CeEEEeCCC
Confidence 333345677899999998999999999999998 477788875
No 122
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=61.21 E-value=13 Score=26.15 Aligned_cols=31 Identities=29% Similarity=0.282 Sum_probs=25.1
Q ss_pred CCeEEEEeCCc-hhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQSG-KRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l 145 (161)
.-.+-++|.+. +||..+-..|++.|| +|..+
T Consensus 9 ~l~~avVCaSN~NRSMEaH~~L~k~G~-~V~Sf 40 (198)
T 3p9y_A 9 KLAVAVVDSSNMNRSMEAHNFLAKKGF-NVRSY 40 (198)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred CceEEEEcCCCCcccHHHHHHHHhCCC-ceeec
Confidence 34688889875 799999999999999 46654
No 123
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=60.65 E-value=13 Score=25.95 Aligned_cols=45 Identities=11% Similarity=0.116 Sum_probs=28.5
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCC
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 159 (161)
.+++++| ..|..+..++..|++.||+-+..++.....+.-.|+|+
T Consensus 12 ~k~v~Ii-GAGg~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~V 56 (220)
T 4ea9_A 12 IGGVVII-GGGGHAKVVIESLRACGETVAAIVDADPTRRAVLGVPV 56 (220)
T ss_dssp SSCEEEE-CCSHHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCE
T ss_pred CCCEEEE-cCCHHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeE
Confidence 4578888 55566778888888889876667776544333345543
No 124
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=60.54 E-value=24 Score=21.88 Aligned_cols=26 Identities=23% Similarity=0.431 Sum_probs=17.8
Q ss_pred CeEEEEeCCchhHHH-HH----HHHHHCCCc
Q 031359 115 DEIIVGCQSGKRSMM-AA----TDLLNAGFA 140 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~-~~----~~L~~~G~~ 140 (161)
..|+++|.+|.-+.. ++ ..+.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 569999999964443 33 356667875
No 125
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=60.18 E-value=13 Score=23.83 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=20.7
Q ss_pred EEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 118 IVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 118 vv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
|++|+.|.....++..|.+.|++ |.+++-
T Consensus 10 viIiG~G~~G~~la~~L~~~g~~-v~vid~ 38 (140)
T 3fwz_A 10 ALLVGYGRVGSLLGEKLLASDIP-LVVIET 38 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred EEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 44567787888888888888874 665553
No 126
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=60.08 E-value=11 Score=31.46 Aligned_cols=38 Identities=8% Similarity=0.069 Sum_probs=32.1
Q ss_pred CCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 111 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 111 l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+..+..++|+|.+-..+..++..|...|+ ++..+.|++
T Consensus 436 ~~~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 473 (664)
T 1c4o_A 436 AARGERTLVTVLTVRMAEELTSFLVEHGI-RARYLHHEL 473 (664)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred HhcCCEEEEEECCHHHHHHHHHHHHhcCC-CceeecCCC
Confidence 34577899999999999999999999998 477788875
No 127
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=59.78 E-value=8.1 Score=28.77 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=16.4
Q ss_pred CHHHHHHHHhCC-CEEEEcCChhhH
Q 031359 53 PVRVAHELLQAG-HRYLDVRTPEEF 76 (161)
Q Consensus 53 ~~~~~~~~~~~~-~~liDvR~~~e~ 76 (161)
+..++..+.+.+ ..||+++...+.
T Consensus 28 ~~~d~~~L~~~GIt~Vlnl~~~~e~ 52 (294)
T 3nme_A 28 TPEDVDKLRKIGVKTIFCLQQDPDL 52 (294)
T ss_dssp STHHHHHHHHTTEEEEEECCCHHHH
T ss_pred CHHHHHHHHHCCCCEEEECCCCcch
Confidence 345566666667 469999987663
No 128
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=58.66 E-value=11 Score=25.43 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=19.0
Q ss_pred CCCCeEEEEeCCc-hhHHHH--HHHHHHCCC
Q 031359 112 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGF 139 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~~--~~~L~~~G~ 139 (161)
..+.+|+|+|..| .||..+ +..+...|+
T Consensus 85 ~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred hcCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 3578999999988 666643 334445665
No 129
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=62.22 E-value=2.2 Score=28.72 Aligned_cols=36 Identities=22% Similarity=0.144 Sum_probs=29.5
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
+.++||+|++-..+..++..|...|+. +..+.|++.
T Consensus 30 ~~~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~ 65 (170)
T 2yjt_D 30 ATRSIVFVRKRERVHELANWLREAGIN-NCYLEGEMV 65 (170)
Confidence 457889999988888999999999984 667888764
No 130
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=57.15 E-value=22 Score=24.21 Aligned_cols=48 Identities=19% Similarity=0.211 Sum_probs=33.2
Q ss_pred HHHHHhcCCCCCeEEEEeCCc--hhHHHHHHHHHH---CCCcceeEecccHHH
Q 031359 104 VEEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGFAA 151 (161)
Q Consensus 104 ~~~~~~~l~~~~~ivv~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~~~ 151 (161)
-+.+...++++..+|+.+-.| ..|...|..|.. .|..++..+-||-.+
T Consensus 60 ~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~G 112 (167)
T 1to0_A 60 GDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLG 112 (167)
T ss_dssp HHHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSC
T ss_pred HHHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCC
Confidence 344555566665577777777 468888888776 576778888888643
No 131
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=57.03 E-value=11 Score=23.79 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=20.1
Q ss_pred CCCeEEEEeCCchhHHHHHHHHH----HCCCc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLL----NAGFA 140 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~----~~G~~ 140 (161)
+...|++.|.+|..+...+..++ +.|++
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~ 36 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVR 36 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCc
Confidence 45579999999987776666554 45664
No 132
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=56.33 E-value=56 Score=23.85 Aligned_cols=109 Identities=17% Similarity=0.087 Sum_probs=58.7
Q ss_pred CCcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCC-CcEEeccccccCCCCCCCHHHHHH-HHhcCCCCCeEEEEeCCc-
Q 031359 48 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEE-VSTRFRKHDEIIVGCQSG- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIp-gA~nip~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ivv~c~~g- 124 (161)
-+..+|..-++.+.+.++++.|.+-..+... +++ ++.-++..... .......+.+.+ +.+....++.|++.+.+.
T Consensus 26 d~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~-~~~~~~~~~~~~k~~-~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP 103 (280)
T 1s4d_A 26 DPGLLTLHAANALRQADVIVHDALVNEDCLK-LARPGAVLEFAGKRG-GKPSPKQRDISLRLVELARAGNRVLRLKGGDP 103 (280)
T ss_dssp CTTSSBHHHHHHHHHCSEEEECSCSCTTGGG-GSSTTCCEEECSCCC---CCCCHHHHHHHHHHHHHTTCCEEEEESBCT
T ss_pred CHHHHHHHHHHHHHhCCEEEEcCCCCHHHHH-hccCCCEEEeccccc-cccccCHHHHHHHHHHHHhCCCeEEEEcCCCC
Confidence 3456788888877777888888876544432 332 33222221000 001122233333 333334456677776532
Q ss_pred ---hhHHHHHHHHHHCCCcceeEeccc---HHHHhhCCCCC
Q 031359 125 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 159 (161)
Q Consensus 125 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 159 (161)
.+.......|.+.|++ +.++.|= ..+....|.|+
T Consensus 104 ~i~g~g~~l~~~l~~~gi~-veviPGiSs~~aa~a~~Gipl 143 (280)
T 1s4d_A 104 FVFGRGGEEALTLVEHQVP-FRIVPGITAGIGGLAYAGIPV 143 (280)
T ss_dssp TSSSSHHHHHHHHHTTTCC-EEEECCCCTTTHHHHHTTCCS
T ss_pred ccccCHHHHHHHHHHCCCC-EEEEcCccHHHHHHHHcCCCc
Confidence 3455677788888974 7777662 23445567765
No 133
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=56.19 E-value=15 Score=27.18 Aligned_cols=38 Identities=24% Similarity=0.300 Sum_probs=31.6
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..+..++|+|++-..+..++..|+..|+. +..+.|++.
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 273 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDLS 273 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSSC
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCCC-eEEeeCCCC
Confidence 34567899999988999999999999984 778888763
No 134
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=55.82 E-value=12 Score=28.22 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=31.0
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
...+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCCC-eEEecCCCC
Confidence 3568999999988899999999999984 778888763
No 135
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=55.81 E-value=14 Score=27.65 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
.+.+++++|++-..+..++..|+..|+ ++..+.|++.
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCC-cEEEeCCCCC
Confidence 456899999998889999999999998 4778888863
No 136
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=55.31 E-value=14 Score=27.96 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=30.8
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
...+++++|++-..+..++..|...|+. +..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCe-EEEecCCC
Confidence 3468999999999999999999999984 77888885
No 137
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=54.32 E-value=15 Score=27.94 Aligned_cols=36 Identities=11% Similarity=0.354 Sum_probs=30.6
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
...++|+|++-..+..++..|...|+ ++..+.|++.
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANF-TVSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCC-ceEEeeCCCC
Confidence 45789999998889999999999998 4778888863
No 138
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=54.31 E-value=18 Score=26.05 Aligned_cols=50 Identities=14% Similarity=0.179 Sum_probs=35.5
Q ss_pred CCCCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE---e----cccHHHHhhCCCCCC
Q 031359 111 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---I----AGGFAAWRQNGLPTE 160 (161)
Q Consensus 111 l~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~---l----~GG~~~W~~~g~p~~ 160 (161)
+.+++.|+++.+ +|.....++..|++.|...+.+ + .+|.....+.|.|+.
T Consensus 134 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~ 193 (234)
T 3m3h_A 134 AEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASY 193 (234)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEE
Confidence 346788888875 6888889999999999765432 2 244556667787763
No 139
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=54.20 E-value=23 Score=26.99 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=30.0
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
..+.+++|+|++-..+..++..|...|+. +..++|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIK-AKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCC-cEEEec
Confidence 45778999999988888999999999984 777888
No 140
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=54.15 E-value=22 Score=28.37 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=31.2
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHC---CCcceeEecccHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNA---GFAGITDIAGGFA 150 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~---G~~~v~~l~GG~~ 150 (161)
..+..+||||.+-..+..++..|... |+ .+..+.|++.
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~-~v~~~h~~~~ 377 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDL-PILEFHGKIT 377 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTS-CEEEESTTSC
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCc-eEEEecCCCC
Confidence 56778999999988888999999887 76 4777888863
No 141
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=53.81 E-value=14 Score=28.29 Aligned_cols=83 Identities=12% Similarity=0.153 Sum_probs=42.7
Q ss_pred CHHHHHHHHh----CCCEEEEcCChhhHhcCCCCC-cEEeccccccCCCCCCCHHHHHHHHh----cC--CCCCeEEEEe
Q 031359 53 PVRVAHELLQ----AGHRYLDVRTPEEFSAGHATG-AINVPYMYRVGSGMTKNLKFVEEVST----RF--RKHDEIIVGC 121 (161)
Q Consensus 53 ~~~~~~~~~~----~~~~liDvR~~~e~~~ghIpg-A~nip~~~~~~~~~~~~~~~~~~~~~----~l--~~~~~ivv~c 121 (161)
+.+++...++ +.+.|++++++..|....+.+ -.++|+.+. ..+..+.+..... .+ .++.+|+|.|
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~----~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC 126 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDH----NVPTLVDLLKFIDDAKVWMTSDPDHVIAIHS 126 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECTT----SCCCHHHHHHHHHHHHHHHHTCTTCEEEEEC
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCCC----CCCCHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 4455555543 347899998655565443333 345665322 1122222222211 12 3457899999
Q ss_pred CCc-hh-HHHHHHHHHHCCC
Q 031359 122 QSG-KR-SMMAATDLLNAGF 139 (161)
Q Consensus 122 ~~g-~~-a~~~~~~L~~~G~ 139 (161)
..| .| +..++..|...|.
T Consensus 127 ~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 127 KGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp SSSSHHHHHHHHHHHHHTTS
T ss_pred CCCCcchHHHHHHHHHHhcC
Confidence 876 34 3445555655553
No 142
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=52.15 E-value=26 Score=24.36 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=34.4
Q ss_pred CCCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe------cccHHHHhhCCCCC
Q 031359 112 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI------AGGFAAWRQNGLPT 159 (161)
Q Consensus 112 ~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l------~GG~~~W~~~g~p~ 159 (161)
.+++.|+++.+ +|.....++..|++.|-+.|.++ .+|.......|.|+
T Consensus 109 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v 165 (205)
T 2wns_A 109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRL 165 (205)
T ss_dssp CTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEE
T ss_pred CCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeE
Confidence 35778888875 68888889999999998765432 25555666667665
No 143
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=51.80 E-value=28 Score=26.98 Aligned_cols=33 Identities=24% Similarity=0.209 Sum_probs=28.9
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
.++|+|++-..+..++..|.+.|+. +..+.|++
T Consensus 302 ~~lVF~~t~~~a~~l~~~L~~~~~~-~~~lhg~~ 334 (434)
T 2db3_A 302 GTIVFVETKRGADFLASFLSEKEFP-TTSIHGDR 334 (434)
T ss_dssp TEEEECSSHHHHHHHHHHHHHTTCC-EEEESTTS
T ss_pred CEEEEEeCcHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 3899999988999999999999985 77888885
No 144
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=51.45 E-value=18 Score=23.66 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=25.7
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.|-+.|.+
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~ 116 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKI 116 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEE
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEE
Confidence 4678888875 6888889999999999876653
No 145
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=50.58 E-value=47 Score=21.29 Aligned_cols=88 Identities=19% Similarity=0.250 Sum_probs=42.7
Q ss_pred CCCcccCHHHHHHH-HhCC-CEEEEcCChh----hHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc----C--CCC
Q 031359 47 GVPTSVPVRVAHEL-LQAG-HRYLDVRTPE----EFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR----F--RKH 114 (161)
Q Consensus 47 ~~~~~i~~~~~~~~-~~~~-~~liDvR~~~----e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~----l--~~~ 114 (161)
+.+...+.+++.++ .+.+ ..||++++.. .+...++ .-+++|... ......+.+...... + .++
T Consensus 22 ~~p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~-~~~~~p~~d----~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (159)
T 1rxd_A 22 HNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDD----GAPPSNQIVDDWLSLVKIKFREEPG 96 (159)
T ss_dssp CCCCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTC-EEEECCC------CCCCCHHHHHHHHHHHHHHHHHSTT
T ss_pred CCCccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCC-EEEeCCCcC----CCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 34445666774444 4556 4688888642 2222222 123444321 111222322222221 1 346
Q ss_pred CeEEEEeCCc-hhHH-HHHHHHHHCCC
Q 031359 115 DEIIVGCQSG-KRSM-MAATDLLNAGF 139 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~-~~~~~L~~~G~ 139 (161)
.+|+|.|..| .|+. .++..|...|.
T Consensus 97 ~~vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 97 CCIAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp CEEEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 8999999987 4554 34445555565
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.54 E-value=24 Score=22.37 Aligned_cols=29 Identities=14% Similarity=0.096 Sum_probs=19.9
Q ss_pred EEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 118 IVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 118 vv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
|++|+.|.....++..|.+.|++ |.+++-
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~-V~~id~ 37 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKK-VLAVDK 37 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCCe-EEEEEC
Confidence 34456677777888888888874 665543
No 147
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=50.36 E-value=22 Score=23.84 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=26.0
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++++ +|.....++..|++.|-+.|++
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEE
Confidence 4678888875 6888889999999999876653
No 148
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=49.95 E-value=60 Score=23.91 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=55.2
Q ss_pred CCcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCC-CcEEeccccccCCCCCCCHHHHH-HHHhcCCCCCeEEEEeCCc-
Q 031359 48 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVE-EVSTRFRKHDEIIVGCQSG- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIp-gA~nip~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ivv~c~~g- 124 (161)
-+..+|...++.+.+.++++.|.|...+... +++ ++..+....... ......+.+. .+.+....++.|++.+.+.
T Consensus 36 dp~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~i~~~k~~~-~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP 113 (294)
T 2ybo_A 36 DPGLLTLRAWALLQQAEVVVYDRLVARELIA-LLPESCQRIYVGKRCG-HHSLPQEEINELLVRLARQQRRVVRLKGGDP 113 (294)
T ss_dssp CGGGSCHHHHHHHTTCSEEEECTTSCHHHHH-HSCTTSEEEECC---------CHHHHHHHHHHHHHTTCCEEEEEEBCT
T ss_pred CHHHHHHHHHHHHHcCCEEEEcCCCCHHHHH-hcccCCeEEecccccc-cccCCHHHHHHHHHHHHHCCCeEEEEcCCCC
Confidence 3456788777777666777888875544432 222 222222110000 0011222233 2333333455666654321
Q ss_pred ---hhHHHHHHHHHHCCCcceeEeccc---HHHHhhCCCCC
Q 031359 125 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 159 (161)
Q Consensus 125 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 159 (161)
.+.......|.+.|++ +.++.|= ..+....|.|+
T Consensus 114 ~i~g~g~~l~~~l~~~gi~-vevIPGiSS~~aa~a~~Gipl 153 (294)
T 2ybo_A 114 FIFGRGAEELERLLEAGVD-CQVVPGVTAASGCSTYAGIPL 153 (294)
T ss_dssp TSSSSHHHHHHHHHHTTCC-EEEECCCCHHHHHHHHTTCCS
T ss_pred CccCCHHHHHHHHHHCCCC-EEEECCHHHHHHHHHHcCCCc
Confidence 3455677788888974 7777762 22445567776
No 149
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=49.68 E-value=19 Score=26.82 Aligned_cols=26 Identities=23% Similarity=0.194 Sum_probs=22.3
Q ss_pred chhHHHHHHHHHHCCCcceeEecccH
Q 031359 124 GKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 124 g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
|..-..++..|+++|..+...|+||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 45567899999999999999999974
No 150
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=49.59 E-value=19 Score=30.96 Aligned_cols=37 Identities=19% Similarity=0.289 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
+.++++|+|.+-..+..++..|.+.|+. ..+|.|+..
T Consensus 473 ~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~-~~vLhgkq~ 509 (822)
T 3jux_A 473 KGQPVLVGTTSIEKSELLSSMLKKKGIP-HQVLNAKYH 509 (822)
T ss_dssp HTCCEEEEESSHHHHHHHHHHHHTTTCC-CEEECSCHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCch
Confidence 5789999999999999999999999996 667888753
No 151
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=49.47 E-value=29 Score=28.05 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=30.7
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHC---CCcceeEecccH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNA---GFAGITDIAGGF 149 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~---G~~~v~~l~GG~ 149 (161)
..+..++|||.+-..+..++..|... |+ .+..+.|++
T Consensus 286 ~~~~~~iVF~~t~~~~~~l~~~L~~~~~~~~-~v~~~hg~~ 325 (579)
T 3sqw_A 286 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDL-PILEFHGKI 325 (579)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHHTTTS-CEEEESTTS
T ss_pred CCCCcEEEECCcHHHHHHHHHHHHHhhcCCC-cEEEecCCC
Confidence 45678999999988888999999887 76 477788885
No 152
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=48.85 E-value=29 Score=23.45 Aligned_cols=47 Identities=15% Similarity=0.137 Sum_probs=33.1
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee---Eec---ccHHHHhhCCCCC
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT---DIA---GGFAAWRQNGLPT 159 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~---~l~---GG~~~W~~~g~p~ 159 (161)
+++.|+++.+ +|.....++..|++.|-+.+. +++ +|.....+.|.|+
T Consensus 105 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~ 160 (178)
T 2yzk_A 105 PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRL 160 (178)
T ss_dssp CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEE
T ss_pred CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcE
Confidence 6788988875 688888999999999976443 233 4445555566664
No 153
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=48.80 E-value=16 Score=22.92 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=17.9
Q ss_pred CCeEEEEeCCchhHHH-HHH----HHHHCCCc
Q 031359 114 HDEIIVGCQSGKRSMM-AAT----DLLNAGFA 140 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~-~~~----~L~~~G~~ 140 (161)
...|+++|++|.-+.. ++. .+.+.|++
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 3579999999954333 343 55667875
No 154
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=48.31 E-value=7.2 Score=24.37 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=17.2
Q ss_pred CCeEEEEeCCchhHHHHHH----HHHHCCCc
Q 031359 114 HDEIIVGCQSGKRSMMAAT----DLLNAGFA 140 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~----~L~~~G~~ 140 (161)
.-.|++.|++|..+..++. .+.+.|++
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 3459999999854334444 45556774
No 155
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=48.08 E-value=24 Score=23.74 Aligned_cols=32 Identities=13% Similarity=-0.037 Sum_probs=26.1
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.|-+.|.+
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~ 153 (180)
T 1zn8_A 119 PGQRVVVVDDLLATGGTMNAACELLGRLQAEVLEC 153 (180)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEE
Confidence 5778888875 6888889999999999876653
No 156
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=48.05 E-value=32 Score=24.12 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=25.3
Q ss_pred CCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++.|+++++ +|.....+...|++.|.++|+++
T Consensus 124 ~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~ 158 (209)
T 1i5e_A 124 ERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFM 158 (209)
T ss_dssp TSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 567888765 68888889999999998877743
No 157
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=47.73 E-value=20 Score=23.23 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=23.4
Q ss_pred eEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccHH
Q 031359 116 EIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 116 ~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
.|+|+|.+. -||..|...|+.+.-+++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 688999764 57777777777765445555555543
No 158
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=47.10 E-value=20 Score=30.10 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=31.7
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
+...++|+|++-..+..++..|++.|+ ++..+.|++.
T Consensus 395 ~~~~vLVFv~Tr~~ae~la~~L~~~g~-~v~~lHG~l~ 431 (666)
T 3o8b_A 395 RGGRHLIFCHSKKKCDELAAKLSGLGI-NAVAYYRGLD 431 (666)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECTTSC
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHhCCC-cEEEecCCCC
Confidence 456899999999999999999999998 4878888864
No 159
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=47.02 E-value=26 Score=25.34 Aligned_cols=49 Identities=10% Similarity=0.123 Sum_probs=34.3
Q ss_pred CCCCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE---ec----ccHHHHhhCCCCC
Q 031359 111 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---IA----GGFAAWRQNGLPT 159 (161)
Q Consensus 111 l~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~---l~----GG~~~W~~~g~p~ 159 (161)
+.+++.|+++.+ +|.....++..|++.|.+.+.+ ++ +|.....+.|+++
T Consensus 146 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~ 204 (243)
T 3dez_A 146 VTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKL 204 (243)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCE
T ss_pred cCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCE
Confidence 346788888875 6888889999999999765442 23 3455555567665
No 160
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=46.92 E-value=19 Score=23.09 Aligned_cols=26 Identities=35% Similarity=0.566 Sum_probs=17.6
Q ss_pred CCeEEEEeCCchhHHHH-HH----HHHHCCC
Q 031359 114 HDEIIVGCQSGKRSMMA-AT----DLLNAGF 139 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~-~~----~L~~~G~ 139 (161)
-..|+++|++|.-+... +. .|.+.|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 45799999999654443 33 5556787
No 161
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=46.38 E-value=25 Score=23.91 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=26.0
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++++ +|.....++..|++.|-+.|++
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 131 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 131 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 6888889999999999877663
No 162
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=46.23 E-value=15 Score=22.91 Aligned_cols=26 Identities=8% Similarity=0.074 Sum_probs=18.3
Q ss_pred CeEEEEeCCchhHHHHHH----HHHHCCCc
Q 031359 115 DEIIVGCQSGKRSMMAAT----DLLNAGFA 140 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~----~L~~~G~~ 140 (161)
..|++.|++|..+..++. .+++.|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 469999999965544444 55667875
No 163
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=46.14 E-value=16 Score=27.65 Aligned_cols=44 Identities=5% Similarity=0.177 Sum_probs=30.6
Q ss_pred HHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 105 EEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 105 ~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
....... ...+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 272 ~~~~~~~-~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~h~~~~ 315 (414)
T 3eiq_A 272 CDLYETL-TITQAVIFINTRRKVDWLTEKMHARDFT-VSAMHGDMD 315 (414)
T ss_dssp HHHHHSS-CCSSCEEECSCHHHHHHHHHHHHTTTCC-CEEC---CH
T ss_pred HHHHHhC-CCCcEEEEeCCHHHHHHHHHHHHhcCCe-EEEecCCCC
Confidence 3333333 3456888999988899999999999984 778888864
No 164
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=45.99 E-value=48 Score=20.12 Aligned_cols=12 Identities=17% Similarity=0.404 Sum_probs=5.0
Q ss_pred HHHHHHHHCCCc
Q 031359 129 MAATDLLNAGFA 140 (161)
Q Consensus 129 ~~~~~L~~~G~~ 140 (161)
.....|...||.
T Consensus 20 ~l~~~L~~~g~~ 31 (129)
T 3h1g_A 20 IIKNTLSRLGYE 31 (129)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCc
Confidence 333444444443
No 165
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=45.96 E-value=14 Score=24.52 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=23.7
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
..|+|+|... -||..|...|+.+.-+++.+...|.
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt 56 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT 56 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc
Confidence 5699999864 5887777788776544555554444
No 166
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=45.58 E-value=52 Score=24.19 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=41.8
Q ss_pred CEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcce
Q 031359 65 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 142 (161)
Q Consensus 65 ~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v 142 (161)
.+++++.+.+|...-.--|+--|-..+.....+..+.+...++...++.+ +++++.+|..+..-+..+.+.|++-|
T Consensus 171 ~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~--~~vIaesGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 171 DALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSD--RLLVGESGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp EEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTT--SEEEEESSCCSHHHHHHHHTTTCCEE
T ss_pred eEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCC--CcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 45778887777653221122111110000011122335556666667654 45567889877788888899998754
No 167
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=45.29 E-value=30 Score=23.64 Aligned_cols=28 Identities=25% Similarity=0.340 Sum_probs=19.0
Q ss_pred CCCCeEEEEeCCc-hhHHH--HHHHHHHCCC
Q 031359 112 RKHDEIIVGCQSG-KRSMM--AATDLLNAGF 139 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~~--~~~~L~~~G~ 139 (161)
..+..|+|.|..| .||.. +|..++..|.
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 4578899999988 56553 4445555665
No 168
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=45.19 E-value=77 Score=22.22 Aligned_cols=108 Identities=19% Similarity=0.070 Sum_probs=57.8
Q ss_pred CCcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHH-HHHhcCCCCCeEEEEeCCc--
Q 031359 48 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVE-EVSTRFRKHDEIIVGCQSG-- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ivv~c~~g-- 124 (161)
.+..+|....+.+.+.+.++.|.+...+... ++ ++.-++..... .......+.+. .+.+....++.|++.+.+.
T Consensus 14 ~~~~LT~~A~~~L~~advv~~~~~~~~~~l~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~ 90 (235)
T 1ve2_A 14 GPEHLTLKALRVLEVAEVVLHDRLVHPGVLA-LA-KGELVPVGKEG-YGGKTPQEAITARLIALAREGRVVARLKGGDPM 90 (235)
T ss_dssp SGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TC-CSEEEEC--------CCCHHHHHHHHHHHHHTTCEEEEEESBCTT
T ss_pred CHHHHHHHHHHHHHhCCEEEEeCCCCHHHHH-hh-CcEEEEecccC-cccccCHHHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 3456788877777777888888776555443 22 43333221000 00011222333 2333344566777765432
Q ss_pred --hhHHHHHHHHHHCCCcceeEeccc---HHHHhhCCCCC
Q 031359 125 --KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 159 (161)
Q Consensus 125 --~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 159 (161)
.........|.+.|++ +.++.|= ..+....|.|+
T Consensus 91 i~~~~~~l~~~l~~~gi~-v~viPGiSs~~aa~a~~g~pl 129 (235)
T 1ve2_A 91 VFGRGGEEALALRRAGIP-FEVVPGVTSAVGALSALGLPL 129 (235)
T ss_dssp SSTTHHHHHHHHHHHTCC-EEEECCCCTTHHHHHHTTCCS
T ss_pred cccCHHHHHHHHHHCCCC-EEEECCHhHHHHHHHHcCCCc
Confidence 3455666777788874 7777762 23456667775
No 169
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=45.06 E-value=36 Score=29.48 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=32.7
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
.+.++++|.|.+-..|..++..|.+.|+. ..+|+|...
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~-~~vLnak~~ 476 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIK-HNVLNAKFH 476 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCC-CEECCTTCH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 46789999999999999999999999996 567888754
No 170
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=44.98 E-value=29 Score=23.70 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=34.8
Q ss_pred CCCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE---ec----ccHHHHhhCCCCC
Q 031359 112 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---IA----GGFAAWRQNGLPT 159 (161)
Q Consensus 112 ~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~---l~----GG~~~W~~~g~p~ 159 (161)
.+++.|+++.+ +|.....++..|++.|-+.|.+ ++ +|.....+.|.|+
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~v 181 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITS 181 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCEE
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCcE
Confidence 36788998875 6888889999999999876542 22 4556655557665
No 171
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=44.67 E-value=29 Score=23.75 Aligned_cols=48 Identities=15% Similarity=0.107 Sum_probs=33.2
Q ss_pred CCCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE---ec----ccHHHHhhCCCCC
Q 031359 112 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---IA----GGFAAWRQNGLPT 159 (161)
Q Consensus 112 ~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~---l~----GG~~~W~~~g~p~ 159 (161)
.+++.|+++.+ +|.....++..|++.|-..|++ ++ +|.....+.|.|+
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~ 175 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRV 175 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCE
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCCcE
Confidence 35788998875 6888889999999999876653 22 3444444456554
No 172
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=44.13 E-value=40 Score=22.97 Aligned_cols=33 Identities=6% Similarity=-0.031 Sum_probs=26.3
Q ss_pred cCCCCCeEEEEeCCchh--HHHHHHHHHHCCCcce
Q 031359 110 RFRKHDEIIVGCQSGKR--SMMAATDLLNAGFAGI 142 (161)
Q Consensus 110 ~l~~~~~ivv~c~~g~~--a~~~~~~L~~~G~~~v 142 (161)
.+.+.+.+++++++|.. ...+|..+++.|.+-|
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vI 108 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYS 108 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEE
Confidence 67788899999999854 4578889999998643
No 173
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=43.75 E-value=30 Score=23.46 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=25.8
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.|-+.|.+
T Consensus 94 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~ 128 (183)
T 1hgx_A 94 EGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKV 128 (183)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 6888888999999999876663
No 174
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=43.73 E-value=35 Score=25.65 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=27.7
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+++.++++++ +|.....++..|++.|-+.|+.+.
T Consensus 216 ~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 4678888875 688888999999999998887554
No 175
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=43.72 E-value=31 Score=23.46 Aligned_cols=32 Identities=9% Similarity=0.023 Sum_probs=26.2
Q ss_pred CCCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 112 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 112 ~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
.+++.|+++.+ +|.....++..|++.|-+.|.
T Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 154 (187)
T 1g2q_A 120 PAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLE 154 (187)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEE
Confidence 35778888875 688888999999999987665
No 176
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=43.56 E-value=90 Score=22.52 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=55.6
Q ss_pred CCcccCHHHHHHHHhCCCEEE-EcCChhhHhcCCCCCcEEeccccccCCCCCCCH-HHHHHHHhcCCCCCeEEEEeCCc-
Q 031359 48 VPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNL-KFVEEVSTRFRKHDEIIVGCQSG- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~li-DvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ivv~c~~g- 124 (161)
-+..+|..-.+.+.+.++++. |.+-..+......+++.-+... .... +..+.+.+....++.|++.+.+.
T Consensus 15 ~~~lLT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~G~~Va~L~~GDP 87 (264)
T 3ndc_A 15 AADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTA-------PMSLDAIIDTIAEAHAAGQDVARLHSGDL 87 (264)
T ss_dssp CGGGSBHHHHHHHHHCSEEEECSTTSCGGGGGGSCTTCEEEECT-------TSCHHHHHHHHHHHHHHTCCEEEEESBCT
T ss_pred ChHHHHHHHHHHHHcCCEEEEECCCCCHHHHhhcCCCCEEEecC-------CCCHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 345678887777777777666 6664433332222355444431 0122 22333333334466677766321
Q ss_pred ---hhHHHHHHHHHHCCCcceeEecccH---HHHhhCCCCC
Q 031359 125 ---KRSMMAATDLLNAGFAGITDIAGGF---AAWRQNGLPT 159 (161)
Q Consensus 125 ---~~a~~~~~~L~~~G~~~v~~l~GG~---~~W~~~g~p~ 159 (161)
.........|.+.|++ +.++.|=- .+-...|.|+
T Consensus 88 ~iyg~~~~l~~~l~~~gi~-veviPGiSs~~aaaA~lG~pl 127 (264)
T 3ndc_A 88 SIWSAMGEQLRRLRALNIP-YDVTPGVPSFAAAAATLGAEL 127 (264)
T ss_dssp TSSCSHHHHHHHHHHTTCC-EEEECCCCHHHHHHHHHTCCS
T ss_pred ccccHHHHHHHHHHhCCCC-EEEeCCHHHHHHHHHHhCCCc
Confidence 3455677788888885 77776621 2233446665
No 177
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 3iqy_A 1m6n_A 1m74_A* 3iqm_A 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=43.23 E-value=25 Score=30.35 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=32.2
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
+.++++|+|.+-..+..++..|...|+. +.+|+|...
T Consensus 431 ~~~pvLVft~s~~~se~Ls~~L~~~gi~-~~vLhg~~~ 467 (844)
T 1tf5_A 431 TGQPVLVGTVAVETSELISKLLKNKGIP-HQVLNAKNH 467 (844)
T ss_dssp HTCCEEEEESCHHHHHHHHHHHHTTTCC-CEEECSSCH
T ss_pred cCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCcc
Confidence 4678999999999999999999999996 667888764
No 178
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=43.16 E-value=32 Score=22.27 Aligned_cols=31 Identities=13% Similarity=0.235 Sum_probs=23.1
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+..|+| ++.|.....++..|...|+ +|.+++
T Consensus 19 ~~~v~I-iG~G~iG~~la~~L~~~g~-~V~vid 49 (155)
T 2g1u_A 19 SKYIVI-FGCGRLGSLIANLASSSGH-SVVVVD 49 (155)
T ss_dssp CCEEEE-ECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCcEEE-ECCCHHHHHHHHHHHhCCC-eEEEEE
Confidence 445554 4778888889999999998 576664
No 179
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=43.01 E-value=7.1 Score=27.07 Aligned_cols=39 Identities=26% Similarity=0.309 Sum_probs=25.0
Q ss_pred CCeEEEEeCCc-hhHHHHHHHHHHC----CCcceeEecccHHHHh
Q 031359 114 HDEIIVGCQSG-KRSMMAATDLLNA----GFAGITDIAGGFAAWR 153 (161)
Q Consensus 114 ~~~ivv~c~~g-~~a~~~~~~L~~~----G~~~v~~l~GG~~~W~ 153 (161)
...|+|+|... -||..|...|+.+ |. ++.+...|..+|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 35799999865 4676666555543 42 4666667776663
No 180
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=42.83 E-value=51 Score=25.36 Aligned_cols=72 Identities=10% Similarity=0.223 Sum_probs=38.5
Q ss_pred CCCEEEEcCChhhHhcCCCCCcE-EeccccccCCCCCCCHHHHHHHHh----cC--CCCCeEEEEeCCc-hh-HHHHHHH
Q 031359 63 AGHRYLDVRTPEEFSAGHATGAI-NVPYMYRVGSGMTKNLKFVEEVST----RF--RKHDEIIVGCQSG-KR-SMMAATD 133 (161)
Q Consensus 63 ~~~~liDvR~~~e~~~ghIpgA~-nip~~~~~~~~~~~~~~~~~~~~~----~l--~~~~~ivv~c~~g-~~-a~~~~~~ 133 (161)
+.+.|+++++ ..|......+.+ ++|+.+. ..+..+.+..... .+ +++.+|+|.|..| .| +..++..
T Consensus 62 ~~y~V~NLse-~~Yd~~~f~~~V~~~~~pD~----~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~ 136 (361)
T 3n0a_A 62 DHYTVYNLSP-KSYRTAKFHSRVSECSWPIR----QAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAM 136 (361)
T ss_dssp TCEEEEECSS-SCCGGGSCGGGEEECCCCSS----SCCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHH
T ss_pred CeEEEEECCC-CCCChhhcCCcEEEeecCCC----CCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCccHHHHHHHH
Confidence 3588999964 567655555433 4555321 1122222222111 11 4567899999876 34 3455556
Q ss_pred HHHCCC
Q 031359 134 LLNAGF 139 (161)
Q Consensus 134 L~~~G~ 139 (161)
|...|.
T Consensus 137 Li~~~~ 142 (361)
T 3n0a_A 137 FIFCNL 142 (361)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 666554
No 181
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=42.60 E-value=35 Score=23.63 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=26.5
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.|+++.+ +|.....++..|++.|-..|++.
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~ 154 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVA 154 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEE
Confidence 5688998876 58888889999999998777643
No 182
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=42.42 E-value=31 Score=23.89 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=25.9
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++++ +|.....++..|++.|-+.|++
T Consensus 117 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 151 (205)
T 1yfz_A 117 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 151 (205)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 6888888999999999877663
No 183
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=41.77 E-value=56 Score=22.14 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=25.7
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 152 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W 152 (161)
...|+++.+.......+...|...||..|.....|-.++
T Consensus 61 ~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~~~eal 99 (206)
T 3mm4_A 61 GKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEAL 99 (206)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESSHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCCHHHHH
Confidence 446777766666666777788888875566666655544
No 184
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=41.74 E-value=35 Score=29.78 Aligned_cols=38 Identities=13% Similarity=0.220 Sum_probs=32.6
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
.+.++++|.|.+-..|..++..|.+.|+. ..+|+|...
T Consensus 458 ~~gqpvLVft~Sie~sE~Ls~~L~~~Gi~-~~vLnak~~ 495 (922)
T 1nkt_A 458 AKGQPVLIGTTSVERSEYLSRQFTKRRIP-HNVLNAKYH 495 (922)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHTTCC-CEEECSSCH
T ss_pred hcCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 35789999999999999999999999996 567888754
No 185
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=41.64 E-value=32 Score=23.18 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=25.6
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCC-CcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G-~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.| .+.|++
T Consensus 95 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 130 (181)
T 1ufr_A 95 TGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYL 130 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 4678888875 6888889999999999 776653
No 186
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=41.03 E-value=37 Score=24.20 Aligned_cols=106 Identities=9% Similarity=0.011 Sum_probs=51.9
Q ss_pred cCHHHHHHHHhCCCEEE-EcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCc-----h
Q 031359 52 VPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-----K 125 (161)
Q Consensus 52 i~~~~~~~~~~~~~~li-DvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g-----~ 125 (161)
+|..-++.+.+.++++. |.|...+.....-+++.-+.. ...........+..+.+.+.+..++.|++.|.+| .
T Consensus 21 lTlrA~~~L~~aDvI~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~G~~Va~ls~~GdP~i~~ 99 (242)
T 1wyz_A 21 LPSYNTEIIRGIRHFIVEDVRSARRFLKKVDREIDIDSL-TFYPLNKHTSPEDISGYLKPLAGGASMGVISEAGCPAVAD 99 (242)
T ss_dssp SCTHHHHHHTTCCEEEESCHHHHHHHHHHHCSSSCTTCC-CCEECCSSCCHHHHHHHHHHHHTTCCEEEECC-------C
T ss_pred cCHHHHHHHHhCCEEEEeCCcchHHHHHhcCCCCceeee-eeecccccCHHHHHHHHHHHHHcCCEEEEEecCCCCcccC
Confidence 67676666666666666 655433332211111110000 0000011112344455555555677888887533 3
Q ss_pred hHHHHHHHHHHCCCcceeEeccc---HHHHhhCCCCC
Q 031359 126 RSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 159 (161)
Q Consensus 126 ~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 159 (161)
+.......+++.|++ +.++.|= ..+....|.|.
T Consensus 100 ~g~~l~~~l~~~gi~-vevIPGiSs~~aa~a~~G~p~ 135 (242)
T 1wyz_A 100 PGADVVAIAQRQKLK-VIPLVGPSSIILSVMASGFNG 135 (242)
T ss_dssp HHHHHHHHHHHTTCC-EEECCCCCHHHHHHHHHTSCS
T ss_pred cHHHHHHHHHHCCCC-EEEeCcHHHHHHHHHHcCCCC
Confidence 444566777888985 7777762 23444456553
No 187
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=40.99 E-value=49 Score=22.40 Aligned_cols=48 Identities=25% Similarity=0.224 Sum_probs=32.5
Q ss_pred HHHHHhcCCCCCeEEEEeCCc--hhHHHHHHHHHH---CCCcceeEecccHHHH
Q 031359 104 VEEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGFAAW 152 (161)
Q Consensus 104 ~~~~~~~l~~~~~ivv~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~~~W 152 (161)
-+.+...++++..+|+.+-.| ..|...|..|.. .| .++..+-||-.++
T Consensus 55 ~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~Gl 107 (163)
T 1o6d_A 55 TEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYGL 107 (163)
T ss_dssp HHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTCC
T ss_pred HHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCC
Confidence 344555676665577777776 467778877765 47 6788888986544
No 188
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=40.47 E-value=34 Score=24.17 Aligned_cols=32 Identities=3% Similarity=-0.044 Sum_probs=26.2
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.|-..|++
T Consensus 102 ~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v 136 (220)
T 1tc1_A 102 EGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKT 136 (220)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 6888889999999999877664
No 189
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=40.33 E-value=42 Score=22.79 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=25.7
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCc--cee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFA--GIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~--~v~ 143 (161)
+++.|+++++ +|.....++..|++.|-. .|.
T Consensus 116 ~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~ 151 (186)
T 1l1q_A 116 PHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIY 151 (186)
T ss_dssp TTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEE
T ss_pred CcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEE
Confidence 5778888875 688888899999999987 665
No 190
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=40.30 E-value=36 Score=23.82 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=26.2
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.|-+.|.+
T Consensus 117 ~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v 151 (211)
T 1pzm_A 117 ENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKT 151 (211)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 6888889999999999876663
No 191
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=40.25 E-value=34 Score=19.56 Aligned_cols=25 Identities=20% Similarity=0.369 Sum_probs=20.7
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLN 136 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~ 136 (161)
..|++|+++|.+...+......+++
T Consensus 45 AGDDTIlvi~r~~~~a~~l~~~i~~ 69 (71)
T 1b4b_A 45 CGDDTCLIICRTPKDAKKVSNQLLS 69 (71)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred eeCCEEEEEECCHHHHHHHHHHHHH
Confidence 4688999999999888888877764
No 192
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=39.83 E-value=80 Score=21.12 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=30.9
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCC
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
...++.....+.++..+++.+............|++.||
T Consensus 122 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 122 EEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 456777777788888888887776666778889999998
No 193
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=39.70 E-value=49 Score=23.55 Aligned_cols=32 Identities=25% Similarity=0.217 Sum_probs=24.2
Q ss_pred CCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++.|+++++ +|.....+...|++.|.++++++
T Consensus 136 gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~ 170 (221)
T 1o5o_A 136 DKEVFLLDPMLATGVSSIKAIEILKENGAKKITLV 170 (221)
T ss_dssp TCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEE
Confidence 567777764 57888888889999998777643
No 194
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=39.47 E-value=36 Score=26.57 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=28.4
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
..+++++|++-..+..++..|+..|+ ++..+.|
T Consensus 177 ~~~~lVF~~s~~~a~~l~~~L~~~~~-~v~~lhg 209 (440)
T 1yks_A 177 KRPTAWFLPSIRAANVMAASLRKAGK-SVVVLNR 209 (440)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTC-CEEECCS
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCC-CEEEecc
Confidence 56799999998889999999999997 4777877
No 195
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=39.31 E-value=44 Score=26.41 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=27.6
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.|+++++ +|.....++..|++.|-+.|+++
T Consensus 337 ~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~ 372 (459)
T 1ao0_A 337 EGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVK 372 (459)
T ss_dssp TTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4688999987 58888899999999998877754
No 196
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=39.16 E-value=36 Score=22.85 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=25.5
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCC-CcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G-~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.| -..|++
T Consensus 97 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 132 (181)
T 1a3c_A 97 TDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQL 132 (181)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 4678888875 6888889999999997 776653
No 197
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=38.56 E-value=43 Score=24.69 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=26.2
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.++++.+ +|.....++..|++.|-+.|+.
T Consensus 204 ~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~ 238 (284)
T 1u9y_A 204 KDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIA 238 (284)
T ss_dssp TTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEE
Confidence 4677888875 6888889999999999887764
No 198
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=38.38 E-value=34 Score=22.11 Aligned_cols=35 Identities=20% Similarity=0.012 Sum_probs=22.6
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+.|+|+|.+. -||..|...|+.+.-.++.+...|.
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt 39 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGI 39 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEES
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcC
Confidence 3688999764 5777777777766434455555554
No 199
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=38.32 E-value=20 Score=24.09 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=24.0
Q ss_pred CeEEEEeCCc-hhHHHHHHHHH----HCCCcceeEecccHHHH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLL----NAGFAGITDIAGGFAAW 152 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~----~~G~~~v~~l~GG~~~W 152 (161)
..|+|+|.+. -||..|...|+ +.|..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 4689999764 46655555444 34655566666677665
No 200
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=37.99 E-value=1.1e+02 Score=21.85 Aligned_cols=103 Identities=9% Similarity=-0.006 Sum_probs=54.3
Q ss_pred CcccCHHHHHHHHhCCCEEE-EcCChhhHhcCCCCCcEEeccccccCCCCCCCHH-HHHHHHhcCCCCCeEEEEeCCc--
Q 031359 49 PTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLK-FVEEVSTRFRKHDEIIVGCQSG-- 124 (161)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~li-DvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~-~~~~~~~~l~~~~~ivv~c~~g-- 124 (161)
+..+|....+.+.+.++++. |.+...+.....-+++.-+... ....+ ..+.+...+..++.|++.+.+.
T Consensus 17 ~~~lT~~A~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~ 89 (253)
T 4e16_A 17 KELITLKGYKLLSNADVVIYAGSLVNPELLEYCKEDCQIHNSA-------HMDLQEIIDVMREGIENNKSVVRLQTGDFS 89 (253)
T ss_dssp GGGSCHHHHHHHHHCSEEEECTTTSCGGGGGGSCTTCEEEEGG-------GCCHHHHHHHHHHHHHTTCCEEEEESBCTT
T ss_pred HHHHHHHHHHHHHhCCEEEEeCCCCCHHHHhhcCCCCEEEecC-------CCCHHHHHHHHHHHHHCCCcEEEEeCCCCc
Confidence 45678888877777777777 6554433322111233322210 01122 2333333344566677766321
Q ss_pred --hhHHHHHHHHHHCCCcceeEeccc---HHHHhhCCCCC
Q 031359 125 --KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 159 (161)
Q Consensus 125 --~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 159 (161)
.........|.+.|++ +.++.|= ..+....|.|+
T Consensus 90 i~~~~~~l~~~l~~~gi~-veviPGiSS~~aa~a~~G~pl 128 (253)
T 4e16_A 90 IYGSIREQVEDLNKLNID-YDCTPGVSSFLGAASSLGVEY 128 (253)
T ss_dssp TTCCHHHHHHHHHHHTCC-EEEECCCCHHHHHHHHHTCCS
T ss_pred cccCHHHHHHHHHHCCCC-EEEECCHHHHHHHHHHhCCCc
Confidence 3455667778888884 7777762 22344456665
No 201
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=37.83 E-value=43 Score=26.68 Aligned_cols=28 Identities=7% Similarity=0.017 Sum_probs=20.1
Q ss_pred CCCeEEEEeCCc-------hhHHHHHHHHHHCCCc
Q 031359 113 KHDEIIVGCQSG-------KRSMMAATDLLNAGFA 140 (161)
Q Consensus 113 ~~~~ivv~c~~g-------~~a~~~~~~L~~~G~~ 140 (161)
+...|++||++. ..+..+...|.+.|+.
T Consensus 145 r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~ 179 (462)
T 3gh1_A 145 ATPNLVVCWGGHSINEVEYQYTREVGHELGLRELN 179 (462)
T ss_dssp CCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 457799999975 2355666778888885
No 202
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=37.73 E-value=1.1e+02 Score=23.99 Aligned_cols=110 Identities=14% Similarity=0.074 Sum_probs=56.4
Q ss_pred CCcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCC-CcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCc--
Q 031359 48 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIp-gA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g-- 124 (161)
-+..+|...++.+.+.+.++.|.+-..+... +++ ++..++.............+..+.+.+....++.|++.+.+.
T Consensus 227 d~~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~~~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~ 305 (457)
T 1pjq_A 227 DAGLLTLKGLQQIQQADIVVYDRLVSDDIMN-LVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKGGDPF 305 (457)
T ss_dssp CGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TSCTTSEEEECSCC---CCCTTHHHHHHHHHHHHTTCEEEEEESBCTT
T ss_pred ChHHccHHHHHHHHhCCEEEEeCCCCHHHHh-hcccCCEEEeccccccccCCCHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3456788888877777888889876555443 332 333333211000001111222333334444566776664432
Q ss_pred --hhHHHHHHHHHHCCCcceeEecccH---HHHhhCCCCC
Q 031359 125 --KRSMMAATDLLNAGFAGITDIAGGF---AAWRQNGLPT 159 (161)
Q Consensus 125 --~~a~~~~~~L~~~G~~~v~~l~GG~---~~W~~~g~p~ 159 (161)
.+.......|.+.|++ +.++.|=- .+....|.|+
T Consensus 306 i~g~g~~l~~~l~~~gi~-v~vvPGiSs~~aa~a~~Gipl 344 (457)
T 1pjq_A 306 IFGRGGEELETLCHAGIP-FSVVPGITAASGCSAYSGIPL 344 (457)
T ss_dssp TSSSHHHHHTTTTTTTCC-EEEECCCCHHHHHHHHTTCCS
T ss_pred ccCCHHHHHHHHHHCCCC-EEEeCCHhHHHHHHHHcCCCc
Confidence 3444555666677874 77776621 2334457665
No 203
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=37.55 E-value=39 Score=24.22 Aligned_cols=29 Identities=7% Similarity=-0.026 Sum_probs=23.9
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcc
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAG 141 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~ 141 (161)
+++.|+++.+ +|.....++..|++.|-+-
T Consensus 135 ~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~v 166 (232)
T 3mjd_A 135 TNKKVLLIDDVMTAGTAFYESYNKLKIINAKI 166 (232)
T ss_dssp TTCEEEEECSCCSSSHHHHHHHHHHHTTTCEE
T ss_pred CCCEEEEEEeeccccHHHHHHHHHHHHCCCEE
Confidence 5788999886 5888888999999999754
No 204
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=37.55 E-value=48 Score=20.22 Aligned_cols=28 Identities=11% Similarity=0.039 Sum_probs=22.3
Q ss_pred CCCeEEEEeCC------chhHHHHHHHHHHCCCc
Q 031359 113 KHDEIIVGCQS------GKRSMMAATDLLNAGFA 140 (161)
Q Consensus 113 ~~~~ivv~c~~------g~~a~~~~~~L~~~G~~ 140 (161)
.+.+|++|..+ ...+..+-..|.+.|++
T Consensus 16 ~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~ 49 (109)
T 3ipz_A 16 NSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP 49 (109)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred ccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCC
Confidence 35678888774 57888899999999975
No 205
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=36.97 E-value=44 Score=23.17 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=25.2
Q ss_pred CCCCeEEEEeC---CchhHHHHHHHHHHCCCcce
Q 031359 112 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGI 142 (161)
Q Consensus 112 ~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v 142 (161)
-+++.|+++.+ +|.....++..|++.|-+.|
T Consensus 115 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v 148 (211)
T 2aee_A 115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVL 148 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEE
T ss_pred CCcCEEEEEeecccchHHHHHHHHHHHHCCCcEE
Confidence 35778888875 68888899999999998764
No 206
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=36.44 E-value=69 Score=19.14 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=13.4
Q ss_pred EEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 117 IIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 117 ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
|+++.+...........|...||..+.....+
T Consensus 7 ilivdd~~~~~~~l~~~l~~~~~~~v~~~~~~ 38 (128)
T 1jbe_A 7 FLVVDDFSTMRRIVRNLLKELGFNNVEEAEDG 38 (128)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCCEEEESSH
T ss_pred EEEECCCHHHHHHHHHHHHHcCCcEEEeeCCH
Confidence 44443333333344444555555334333333
No 207
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=36.39 E-value=49 Score=20.45 Aligned_cols=24 Identities=25% Similarity=0.254 Sum_probs=13.6
Q ss_pred CCchhHHHHHHHHHHCCCcceeEec
Q 031359 122 QSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 122 ~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+.|.....++..|.+.|++ |.+++
T Consensus 11 G~G~iG~~~a~~L~~~g~~-v~~~d 34 (140)
T 1lss_A 11 GIGRVGYTLAKSLSEKGHD-IVLID 34 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCHHHHHHHHHHHhCCCe-EEEEE
Confidence 5565566666666666653 54443
No 208
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=36.20 E-value=39 Score=21.42 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=22.3
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHH
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 152 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W 152 (161)
+|+++.+...........|++.||+-+.....|-.++
T Consensus 10 rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl 46 (123)
T 2lpm_A 10 RVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEAL 46 (123)
T ss_dssp CEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 5666666655555677777777875333444555544
No 209
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=36.11 E-value=37 Score=19.84 Aligned_cols=26 Identities=15% Similarity=0.069 Sum_probs=21.6
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHC
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNA 137 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~ 137 (161)
..|++|+++|.++..+......++++
T Consensus 48 AGDDTIlvi~r~~~~a~~l~~~i~~l 73 (78)
T 1xxa_A 48 AGDDTIFTTPANGFTVKDLYEAILEL 73 (78)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHTT
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHHH
Confidence 36789999999998888888887664
No 210
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=36.07 E-value=96 Score=21.98 Aligned_cols=29 Identities=14% Similarity=0.163 Sum_probs=23.9
Q ss_pred EEEEeCCchhHHHHHHHHHHCCCc--ceeEe
Q 031359 117 IIVGCQSGKRSMMAATDLLNAGFA--GITDI 145 (161)
Q Consensus 117 ivv~c~~g~~a~~~~~~L~~~G~~--~v~~l 145 (161)
++++|.+...+.-+...|++.|+. ++.++
T Consensus 199 ~~i~~~nD~~A~g~~~al~~~g~~v~di~vv 229 (306)
T 8abp_A 199 WLIVGMNDSTVLGGVRATEGQGFKAADIIGI 229 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCCCCceEEE
Confidence 468899988888999999999995 77654
No 211
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=36.01 E-value=70 Score=26.21 Aligned_cols=34 Identities=9% Similarity=0.118 Sum_probs=26.8
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHC------CCcceeEeccc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNA------GFAGITDIAGG 148 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~------G~~~v~~l~GG 148 (161)
+..+||||.+-..+..++..|... |+. +..+.|+
T Consensus 400 ~~~~IVF~~s~~~~~~l~~~L~~~~~l~~~g~~-~~~lhg~ 439 (699)
T 4gl2_A 400 SARGIIFTKTRQSAYALSQWITENEKFAEVGVK-AHHLIGA 439 (699)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHSSCSCC------CEECCCS
T ss_pred CCcEEEEECcHHHHHHHHHHHHhCccccccCcc-eEEEECC
Confidence 678999999988888999999987 874 6678887
No 212
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=35.83 E-value=57 Score=26.07 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=24.9
Q ss_pred HHhcCCCCCeEEEEeCCch---hHHHHHHHHHHCCCcceeE
Q 031359 107 VSTRFRKHDEIIVGCQSGK---RSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 107 ~~~~l~~~~~ivv~c~~g~---~a~~~~~~L~~~G~~~v~~ 144 (161)
....+++.++|+|+|+.|+ .+..+++.|... |+ |.+
T Consensus 39 i~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~-~~-V~v 77 (475)
T 3k5w_A 39 VLQNASLGAKVIILCGSGDNGGDGYALARRLVGR-FR-VLV 77 (475)
T ss_dssp HHTTSCTTCEEEEEECSSHHHHHHHHHHHHHBTT-BE-EEE
T ss_pred HHHHcCCCCeEEEEECCCCCHHHHHHHHHHHHcC-Cc-eEE
Confidence 3344566788999999875 455778888866 64 554
No 213
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=35.68 E-value=47 Score=25.89 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=25.8
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
.+.+||++ +.|.-...+++.|..+|.+++.+++
T Consensus 191 ~~~kVVv~-GAGaAG~~iAkll~~~G~~~I~v~D 223 (388)
T 1vl6_A 191 EEVKVVVN-GIGAAGYNIVKFLLDLGVKNVVAVD 223 (388)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCcEEEEE-CCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 35566665 7778888899999999998888765
No 214
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=35.14 E-value=56 Score=26.18 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=27.4
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.||++.+ +|.....++..|++.|-+.|+++
T Consensus 358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~ 393 (504)
T 1ecf_A 358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLA 393 (504)
T ss_dssp TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEE
Confidence 4678999987 58888899999999998877743
No 215
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=35.04 E-value=34 Score=20.01 Aligned_cols=25 Identities=20% Similarity=0.129 Sum_probs=20.7
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLN 136 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~ 136 (161)
..|++|+++|.+...+..+...|.+
T Consensus 53 AGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 53 AGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHh
Confidence 4688999999999888888877765
No 216
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=35.02 E-value=50 Score=22.46 Aligned_cols=31 Identities=16% Similarity=0.053 Sum_probs=25.2
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.....++..|++.|-+.++
T Consensus 94 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 127 (181)
T 2ywu_A 94 HGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVR 127 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEE
Confidence 4678888774 788888999999999977665
No 217
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=34.79 E-value=49 Score=26.33 Aligned_cols=30 Identities=13% Similarity=0.067 Sum_probs=23.0
Q ss_pred CCCCCeEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 111 FRKHDEIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 111 l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
+.+.++|++...+|..|..++..|++.|++
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e~G~e 36 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQKGAV 36 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHHcCCE
Confidence 455667777777788888888888888885
No 218
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=34.61 E-value=42 Score=19.80 Aligned_cols=25 Identities=20% Similarity=0.344 Sum_probs=20.7
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLN 136 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~ 136 (161)
..|++|+++|.++..+......+.+
T Consensus 57 AGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 57 CGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp ECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHH
Confidence 4688999999999888888877764
No 219
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=34.56 E-value=39 Score=24.54 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=29.4
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHC-CCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNA-GFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~-G~~~v~~l~GG~~ 150 (161)
.+.++||+|+.-.....+...|... |+. +..++|+..
T Consensus 111 ~~~kvlIFs~~~~~~~~l~~~L~~~~g~~-~~~l~G~~~ 148 (271)
T 1z5z_A 111 EGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGELS 148 (271)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHHHCSC-CCEECTTSC
T ss_pred CCCeEEEEeccHHHHHHHHHHHHHhcCCc-EEEEECCCC
Confidence 5678999999888888888899874 985 667888863
No 220
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=34.41 E-value=49 Score=25.67 Aligned_cols=36 Identities=17% Similarity=-0.010 Sum_probs=29.7
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
...++++|++-..+..++..|+..|+ ++..+.|+..
T Consensus 171 ~~~~lVF~~~~~~~~~l~~~L~~~~~-~v~~lhg~~r 206 (431)
T 2v6i_A 171 DGRTVWFVHSIKQGAEIGTCLQKAGK-KVLYLNRKTF 206 (431)
T ss_dssp SSCEEEECSSHHHHHHHHHHHHHTTC-CEEEESTTTH
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCC-eEEEeCCccH
Confidence 44688899998889999999999987 5888888743
No 221
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=34.29 E-value=1.3e+02 Score=22.84 Aligned_cols=43 Identities=12% Similarity=0.215 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 102 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+....+...+...+.++|+ ++|..+..++..|.+.|. +|.++.
T Consensus 133 ~~~~~l~~~~~~~~~vvVi-GgG~~g~E~A~~l~~~g~-~Vtlv~ 175 (408)
T 2gqw_A 133 EDARRIQAGLRPQSRLLIV-GGGVIGLELAATARTAGV-HVSLVE 175 (408)
T ss_dssp HHHHHHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHHHhhcCCeEEEE-CCCHHHHHHHHHHHhCCC-EEEEEE
Confidence 4444444455556777777 677888899999999997 477654
No 222
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=34.12 E-value=59 Score=22.69 Aligned_cols=31 Identities=10% Similarity=0.025 Sum_probs=25.1
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.....++..|++.|-+.+.
T Consensus 115 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 148 (204)
T 3hvu_A 115 EGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVK 148 (204)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEE
Confidence 4678888774 788888999999999977655
No 223
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=34.06 E-value=33 Score=22.62 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=23.2
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccHH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..|+|+|.+. -||..|...|+.+. .++.+...|..
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~ 44 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVG 44 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETT
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEecccc
Confidence 3699999864 58877777777654 23555555553
No 224
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=33.97 E-value=51 Score=23.15 Aligned_cols=31 Identities=10% Similarity=0.117 Sum_probs=23.9
Q ss_pred CCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 114 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 114 ~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
++.++++++ +|.....+...|++.|-+++++
T Consensus 121 ~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 154 (208)
T 2e55_A 121 GKIVVILDPMLATGGTLEVALREILKHSPLKVKS 154 (208)
T ss_dssp TSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 567777765 5788888888999999877664
No 225
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=33.95 E-value=60 Score=23.66 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=25.8
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
.+++++|+ +.|..+..++..|.+.|..+|++++--
T Consensus 118 ~~~~vlvl-GaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 118 KNAKVIVH-GSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TTSCEEEE-CSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCCEEEEE-CCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45567666 666777778888999999888877543
No 226
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=33.71 E-value=77 Score=18.93 Aligned_cols=6 Identities=50% Similarity=0.861 Sum_probs=2.1
Q ss_pred HHHCCC
Q 031359 134 LLNAGF 139 (161)
Q Consensus 134 L~~~G~ 139 (161)
|...||
T Consensus 26 L~~~g~ 31 (129)
T 1p6q_A 26 LQQLGF 31 (129)
T ss_dssp HHTTTC
T ss_pred HHHCCC
Confidence 333333
No 227
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=33.68 E-value=75 Score=20.80 Aligned_cols=42 Identities=7% Similarity=0.065 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeE
Q 031359 102 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
..+......+ ++..+++.+........+...|++.||+.+.+
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEE
Confidence 4666766667 67777777766667778888999999975443
No 228
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.45 E-value=60 Score=22.35 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=25.6
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
++.|+|...+|.-...++..|.+.|+ +|..+.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~ 52 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGH-EPVAMV 52 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCC-eEEEEE
Confidence 56788887788888889999999998 476554
No 229
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=33.45 E-value=49 Score=21.93 Aligned_cols=30 Identities=17% Similarity=0.060 Sum_probs=21.2
Q ss_pred eEEEEeCCchhHHHHHHHHHHC-CCcceeEecc
Q 031359 116 EIIVGCQSGKRSMMAATDLLNA-GFAGITDIAG 147 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~-G~~~v~~l~G 147 (161)
.|+ +|+.|.....++..|.+. |++ |.+++-
T Consensus 41 ~v~-IiG~G~~G~~~a~~L~~~~g~~-V~vid~ 71 (183)
T 3c85_A 41 QVL-ILGMGRIGTGAYDELRARYGKI-SLGIEI 71 (183)
T ss_dssp SEE-EECCSHHHHHHHHHHHHHHCSC-EEEEES
T ss_pred cEE-EECCCHHHHHHHHHHHhccCCe-EEEEEC
Confidence 444 457788888888888888 874 666543
No 230
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=33.35 E-value=75 Score=23.16 Aligned_cols=34 Identities=26% Similarity=0.162 Sum_probs=25.7
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
+++++++. +.|..+..++..|.+.|..++++++-
T Consensus 124 ~~~~~lil-GaGGaarai~~aL~~~g~~~i~i~nR 157 (269)
T 3tum_A 124 AGKRALVI-GCGGVGSAIAYALAEAGIASITLCDP 157 (269)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred ccCeEEEE-ecHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 45666665 66777777888999999988887754
No 231
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=33.12 E-value=77 Score=18.71 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=24.9
Q ss_pred CCCCeEEEEeCCc---hhHHHHHHHHHHCCCcceeEe
Q 031359 112 RKHDEIIVGCQSG---KRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 112 ~~~~~ivv~c~~g---~~a~~~~~~L~~~G~~~v~~l 145 (161)
.++.+|++.++.. ..-..+...|+..|+.++.+.
T Consensus 55 ~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~ 91 (99)
T 2pfu_A 55 KKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLV 91 (99)
T ss_dssp CCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECT
T ss_pred CCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 3466788888765 344567778899999988754
No 232
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=33.07 E-value=52 Score=23.16 Aligned_cols=31 Identities=6% Similarity=0.063 Sum_probs=25.3
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.....+...|++.|-+.|.
T Consensus 133 ~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~ 166 (225)
T 2jbh_A 133 AGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIK 166 (225)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888875 688888899999999987665
No 233
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=33.00 E-value=55 Score=23.29 Aligned_cols=32 Identities=6% Similarity=0.053 Sum_probs=26.1
Q ss_pred CCCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 112 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 112 ~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
.+++.|+++.+ +|.....++..|++.|-+.|.
T Consensus 136 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~ 170 (236)
T 1qb7_A 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVE 170 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEE
Confidence 46788998875 688888999999999987654
No 234
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=32.93 E-value=56 Score=22.13 Aligned_cols=32 Identities=13% Similarity=0.010 Sum_probs=25.4
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.|+++.+ +|.....++..|++.|-+.+++
T Consensus 90 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~ 124 (177)
T 3ohp_A 90 KGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRI 124 (177)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEE
Confidence 4678888774 6888888999999999876653
No 235
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=32.90 E-value=61 Score=23.86 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=25.2
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.++.++|+ +.|..+..++..|.+.|..+|.++.-
T Consensus 121 ~~k~vlvl-GaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 121 KNNICVVL-GSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp TTSEEEEE-CSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred cCCEEEEE-CCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 35667766 55666778888999999987887653
No 236
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=32.88 E-value=69 Score=23.97 Aligned_cols=35 Identities=9% Similarity=0.103 Sum_probs=25.8
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
.++.++|+ +.|..+..++..|.+.|.++|.++.-.
T Consensus 147 ~gk~~lVl-GAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLL-GAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEE-CcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35566666 567778788899999999888876543
No 237
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=32.55 E-value=73 Score=23.23 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=25.0
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.++.++++ +.|..+..++..|.+.|..+|.++.-
T Consensus 119 ~~k~~lvl-GaGg~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 119 RNRRVLLL-GAGGAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp TTSEEEEE-CCSHHHHHHHHHHHHTCCSEEEEECS
T ss_pred cCCEEEEE-CccHHHHHHHHHHHHcCCCEEEEEeC
Confidence 35566666 56777778888999999877877653
No 238
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=32.49 E-value=6.1 Score=26.13 Aligned_cols=38 Identities=8% Similarity=-0.014 Sum_probs=22.1
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccHHHH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAAW 152 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~~W 152 (161)
..|+|+|.+. -||..|...|+.+.-+++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 3588888754 4666666666655433344555565555
No 239
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=32.40 E-value=54 Score=23.06 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=24.8
Q ss_pred CCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 114 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 114 ~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
++.|+++++ +|.....+...|++.|-+++++
T Consensus 123 ~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 156 (208)
T 1v9s_A 123 ERRAFLLDPMLATGGSASLALSLLKERGATGVKL 156 (208)
T ss_dssp GSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 467777765 6888888999999999888764
No 240
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=32.36 E-value=1e+02 Score=20.88 Aligned_cols=44 Identities=9% Similarity=0.021 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeE
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
..++......+.++..+++.++.......+...|.+.||..+..
T Consensus 136 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 136 KTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp HHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 46777777778888888888876556667777888889865443
No 241
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=32.27 E-value=74 Score=23.31 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=25.5
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
+++.++|+ +.|..+..++..|.+.|..+|.+++-.
T Consensus 126 ~~k~vlVl-GaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQV-GAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEE-CCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 35566666 557777788889999999878876543
No 242
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=32.26 E-value=56 Score=23.20 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=25.4
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.....+...|++.|-+.|.
T Consensus 141 ~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~ 174 (233)
T 1fsg_A 141 RDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMR 174 (233)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888875 688888999999999987665
No 243
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=32.03 E-value=88 Score=19.03 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=23.1
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 152 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W 152 (161)
...|+++.+...........|...|| ++.....+-.++
T Consensus 15 ~~~ilivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~al 52 (138)
T 2b4a_A 15 PFRVTLVEDEPSHATLIQYHLNQLGA-EVTVHPSGSAFF 52 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC-EEEEESSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCC-EEEEeCCHHHHH
Confidence 44566665555556667777777787 465555555544
No 244
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=32.03 E-value=59 Score=22.27 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=25.2
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.+...+...|++.|-+.+.
T Consensus 93 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 126 (186)
T 3o7m_A 93 TGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALK 126 (186)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEE
Confidence 4678888875 788888999999999977655
No 245
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=31.99 E-value=65 Score=19.90 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=20.9
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.|+++ +.|.-...++..|.+.|++ |.+++-
T Consensus 8 ~v~I~-G~G~iG~~~a~~l~~~g~~-v~~~d~ 37 (144)
T 2hmt_A 8 QFAVI-GLGRFGGSIVKELHRMGHE-VLAVDI 37 (144)
T ss_dssp SEEEE-CCSHHHHHHHHHHHHTTCC-CEEEES
T ss_pred cEEEE-CCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 45544 5577778888888888874 666553
No 246
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=31.95 E-value=61 Score=20.71 Aligned_cols=36 Identities=19% Similarity=0.012 Sum_probs=23.1
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccHH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..|+|+|.+. -||..|...|+.+.-.++.+...|..
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 40 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIE 40 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESS
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCC
Confidence 3688999764 57777777777654244555555543
No 247
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=31.92 E-value=98 Score=19.54 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=25.1
Q ss_pred CHHHHHHHHhcCCCCCeEEEEeCC------chhHHHHHHHHHHCCCc
Q 031359 100 NLKFVEEVSTRFRKHDEIIVGCQS------GKRSMMAATDLLNAGFA 140 (161)
Q Consensus 100 ~~~~~~~~~~~l~~~~~ivv~c~~------g~~a~~~~~~L~~~G~~ 140 (161)
..+.++.+.. +.+||+|..+ ...+.++...|...|+.
T Consensus 9 ~~e~i~~~i~----~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~ 51 (118)
T 2wul_A 9 SAEQLDALVK----KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVR 51 (118)
T ss_dssp CHHHHHHHHH----HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHh----cCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCc
Confidence 3455555554 4567887653 45788888899999874
No 248
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=31.67 E-value=48 Score=25.18 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=27.8
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCccee-Eeccc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGIT-DIAGG 148 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~-~l~GG 148 (161)
+.+++|+|++-..+..++..|...|+. +. .+.|.
T Consensus 252 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~h~~ 286 (414)
T 3oiy_A 252 RDGILIFAQTEEEGKELYEYLKRFKFN-VGETWSEF 286 (414)
T ss_dssp CSSEEEEESSHHHHHHHHHHHHHTTCC-EEESSSCH
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-eehhhcCc
Confidence 367899999988899999999999985 54 56654
No 249
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=31.66 E-value=57 Score=22.55 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=25.1
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCC-Cccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G-~~~v~ 143 (161)
+++.|+++.+ +|.....++..|++.| -+.|+
T Consensus 111 ~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~ 145 (201)
T 1w30_A 111 DDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQ 145 (201)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEE
Confidence 4678888875 6888888999999999 76665
No 250
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=31.66 E-value=61 Score=24.54 Aligned_cols=33 Identities=27% Similarity=0.208 Sum_probs=26.5
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.++++.+ +|.....++..|++.|-+.|+.+
T Consensus 212 ~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~ 247 (326)
T 3s5j_B 212 KDRVAILVDDMADTCGTICHAADKLLSAGATRVYAI 247 (326)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEE
Confidence 4677888764 78888899999999998877743
No 251
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=31.48 E-value=86 Score=18.78 Aligned_cols=24 Identities=8% Similarity=0.008 Sum_probs=12.1
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.|+++.+...........|...||
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~ 32 (130)
T 3eod_A 9 QILIVEDEQVFRSLLDSWFSSLGA 32 (130)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCc
Confidence 455554444444445555555555
No 252
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=31.40 E-value=68 Score=24.17 Aligned_cols=33 Identities=12% Similarity=0.022 Sum_probs=26.7
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.++++.+ +|.....++..|++.|-..|+.+
T Consensus 215 ~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~ 250 (319)
T 3dah_A 215 EGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAY 250 (319)
T ss_dssp CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEE
Confidence 4677888764 78888899999999998887743
No 253
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=31.37 E-value=37 Score=22.94 Aligned_cols=36 Identities=25% Similarity=0.217 Sum_probs=24.7
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccHHH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAA 151 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~~ 151 (161)
..|+|+|.+. -||..|...|+.+. .++.+...|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 3799999864 58877777887764 235566666543
No 254
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=31.20 E-value=93 Score=19.06 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=11.3
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.|+++.+...........|...||
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~ 30 (140)
T 3h5i_A 7 KILIVEDSKFQAKTIANILNKYGY 30 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCC
Confidence 344444444444444555555555
No 255
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=31.08 E-value=81 Score=18.82 Aligned_cols=7 Identities=14% Similarity=0.572 Sum_probs=2.9
Q ss_pred HHHHCCC
Q 031359 133 DLLNAGF 139 (161)
Q Consensus 133 ~L~~~G~ 139 (161)
.+....+
T Consensus 42 ~l~~~~~ 48 (127)
T 3i42_A 42 AMSTRGY 48 (127)
T ss_dssp HHHHSCC
T ss_pred HHHhcCC
Confidence 3344444
No 256
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=31.06 E-value=17 Score=24.31 Aligned_cols=38 Identities=16% Similarity=-0.006 Sum_probs=24.1
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHH----CCCc-c-eeEecccHHHH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLN----AGFA-G-ITDIAGGFAAW 152 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~----~G~~-~-v~~l~GG~~~W 152 (161)
..|+|+|.+. -||..|-..|+. .|.. + +.+...|..+|
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 4699999864 466655555444 4553 3 66667777665
No 257
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=31.05 E-value=79 Score=24.08 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=27.9
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+.+|+++ +.|.-.+.++..|...|+.++.+++...
T Consensus 34 ~~~VlIv-GaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLL-GAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEE-CCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4566666 6777778999999999999998887754
No 258
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=31.00 E-value=1.4e+02 Score=20.94 Aligned_cols=106 Identities=18% Similarity=0.131 Sum_probs=54.7
Q ss_pred CCcccCHHHHHHHHhCCCEEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHH-HHHHhcCCCCCeEEEEeCCc--
Q 031359 48 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV-EEVSTRFRKHDEIIVGCQSG-- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~-~~~~~~l~~~~~ivv~c~~g-- 124 (161)
.+..+|...++.+.+.+.++.|.+....... +++ +-.+........ ....+.+ +.+.+....++.|++.+.+.
T Consensus 12 ~~~~LT~~A~~~L~~advI~~~~~~~~~~l~-~~~-~~~i~~~~~~~~--~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~ 87 (239)
T 1va0_A 12 DPELLTLKAYRLLKEAPVVLYDRLVDERVLA-LAP-GEKVYVGKEEGE--SEKQEEIHRLLLRHARAHPFVVRLKGGDPM 87 (239)
T ss_dssp CGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TCC-SEEEECCCCC------CHHHHHHHHHHHHHTSSEEEEEESBCTT
T ss_pred CHHHHHHHHHHHHHhCCEEEEcCCCCHHHHh-hcc-ccEEeccccccc--ccCHHHHHHHHHHHHHCCCcEEEEeCCCCc
Confidence 3446788877777777888888776554432 333 333322100000 1122222 23333344566777765432
Q ss_pred --hhHHHHHHHHHHCCCcceeEecccHHHHhhCCCCC
Q 031359 125 --KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPT 159 (161)
Q Consensus 125 --~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 159 (161)
.........|.+.|++ +.++.| ..+...+|.|+
T Consensus 88 i~~~~~~l~~~l~~~gi~-v~viPG-iSs~~aag~pl 122 (239)
T 1va0_A 88 VFGRGGEEVLFLLRHGVP-VEVVPG-VTSLLASGLPL 122 (239)
T ss_dssp SSSSHHHHHHHHHHTTCC-EEEECC-CCGGGTTCCCS
T ss_pred cccCHHHHHHHHHHCCCc-EEEECC-cchHhhcCCCc
Confidence 3455667778888874 777765 33333225554
No 259
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=30.90 E-value=61 Score=25.36 Aligned_cols=33 Identities=18% Similarity=0.026 Sum_probs=27.8
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
...++|+|++-..+..++..|+..|+. +..|.|
T Consensus 190 ~~~~LVF~~s~~~~~~l~~~L~~~g~~-v~~lh~ 222 (459)
T 2z83_A 190 AGKTVWFVASVKMGNEIAMCLQRAGKK-VIQLNR 222 (459)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCC-EEEEST
T ss_pred CCCEEEEeCChHHHHHHHHHHHhcCCc-EEecCH
Confidence 457899999988999999999999984 666776
No 260
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=30.84 E-value=53 Score=24.11 Aligned_cols=32 Identities=19% Similarity=0.086 Sum_probs=24.3
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
++.++|+ +.|..+..++..|.+.|+.+|.+++
T Consensus 117 ~k~vlvl-GaGg~g~aia~~L~~~G~~~v~v~~ 148 (277)
T 3don_A 117 DAYILIL-GAGGASKGIANELYKIVRPTLTVAN 148 (277)
T ss_dssp GCCEEEE-CCSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred CCEEEEE-CCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4566666 5677777888999999997787664
No 261
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=30.74 E-value=55 Score=25.55 Aligned_cols=37 Identities=14% Similarity=-0.014 Sum_probs=30.5
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAA 151 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~ 151 (161)
..+++|+|++-..+..++..|+..|+. +..+.|....
T Consensus 188 ~~~~lVF~~s~~~a~~l~~~L~~~g~~-~~~lh~~~~~ 224 (451)
T 2jlq_A 188 QGKTVWFVPSIKAGNDIANCLRKSGKR-VIQLSRKTFD 224 (451)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHTTTCC-EEEECTTTHH
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHcCCe-EEECCHHHHH
Confidence 457899999988999999999999984 7778886653
No 262
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=30.71 E-value=79 Score=24.56 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=25.8
Q ss_pred CCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 111 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 111 l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+++...|+|+ ++|.-...+|..|.+.|+ +|.+++
T Consensus 8 ~~~~~~v~II-GaG~aGl~aA~~L~~~g~-~v~v~E 41 (489)
T 2jae_A 8 VKGSHSVVVL-GGGPAGLCSAFELQKAGY-KVTVLE 41 (489)
T ss_dssp CCSCCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred ccCCCCEEEE-CCCHHHHHHHHHHHHCCC-CEEEEe
Confidence 3445667776 777777889999999998 577775
No 263
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=30.62 E-value=64 Score=22.68 Aligned_cols=31 Identities=16% Similarity=0.034 Sum_probs=25.1
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.....++..|++.|-+.+.
T Consensus 124 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~ 157 (226)
T 2ps1_A 124 ENKRILIIDDVMTAGTAINEAFEIISNAKGQVVG 157 (226)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CcCEEEEEEecccChHHHHHHHHHHHHcCCeEEE
Confidence 5778888875 688888899999999976554
No 264
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=30.62 E-value=63 Score=25.27 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=24.6
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+.+||++ +.|.-..-+++.|..+|.+||.+++
T Consensus 188 d~kVVi~-GAGaAG~~iA~ll~~~Ga~~I~v~D 219 (398)
T 2a9f_A 188 EVSIVVN-GGGSAGLSITRKLLAAGATKVTVVD 219 (398)
T ss_dssp SCEEEEE-CCSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ccEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEE
Confidence 4556655 7777777888899999998888775
No 265
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=30.41 E-value=54 Score=21.56 Aligned_cols=27 Identities=26% Similarity=0.378 Sum_probs=17.8
Q ss_pred CCCeEEEEeCCc-hhHH-HHHHHHHH-CCC
Q 031359 113 KHDEIIVGCQSG-KRSM-MAATDLLN-AGF 139 (161)
Q Consensus 113 ~~~~ivv~c~~g-~~a~-~~~~~L~~-~G~ 139 (161)
.+.+|+|.|..| .|+. .++..|.. .|+
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~ 141 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGI 141 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCC
Confidence 578999999987 4544 34444443 676
No 266
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=30.25 E-value=58 Score=22.80 Aligned_cols=31 Identities=6% Similarity=0.012 Sum_probs=24.9
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.....+...|++.|-+.|.
T Consensus 125 ~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~ 158 (217)
T 1z7g_A 125 TGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVK 158 (217)
T ss_dssp TTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888875 688888899999999987665
No 267
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=30.05 E-value=96 Score=18.86 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=11.1
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.|+++.+...........|...||
T Consensus 8 ~iLivdd~~~~~~~l~~~l~~~g~ 31 (140)
T 3grc_A 8 RILICEDDPDIARLLNLMLEKGGF 31 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCC
Confidence 344444444444444445555555
No 268
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=29.90 E-value=51 Score=25.99 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=29.2
Q ss_pred HhcCCC-CCeEEEEeCCchhHHHHHHHHHHC--CCcceeEecccHHHH
Q 031359 108 STRFRK-HDEIIVGCQSGKRSMMAATDLLNA--GFAGITDIAGGFAAW 152 (161)
Q Consensus 108 ~~~l~~-~~~ivv~c~~g~~a~~~~~~L~~~--G~~~v~~l~GG~~~W 152 (161)
....+. .-.-+++|++|..|..+|..|.+. |-+++..++|+|.+|
T Consensus 117 ~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~ 164 (456)
T 4atq_A 117 NRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGR 164 (456)
T ss_dssp HHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCS
T ss_pred HHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCc
Confidence 333443 245678899998888777766543 444566677777654
No 269
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=29.84 E-value=59 Score=22.85 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=23.8
Q ss_pred CCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 114 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 114 ~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
++.|+++++ +|.....+...|++.|-+++.+
T Consensus 123 ~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 156 (208)
T 2ehj_A 123 ERMALIVDPMLATGGSVIATIDLLKKAGCSSIKV 156 (208)
T ss_dssp GCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 457777764 6888888888999999877664
No 270
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=29.38 E-value=11 Score=29.46 Aligned_cols=36 Identities=17% Similarity=0.341 Sum_probs=0.0
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..+++++|++-..+..++..|...|+ ++..+.|++.
T Consensus 333 ~~~~lvF~~s~~~~~~l~~~L~~~~~-~v~~lh~~~~ 368 (479)
T 3fmp_B 333 IAQAMIFCHTRKTASWLAAELSKEGH-QVALLSGEMM 368 (479)
T ss_dssp -------------------------------------
T ss_pred CCceEEEeCcHHHHHHHHHHHHhCCc-cEEEecCCCC
Confidence 45789999998888899999999997 4778888864
No 271
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=29.34 E-value=84 Score=23.53 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=24.9
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.++.++|+ +.|.-+..++..|.+.|.++|.++.-
T Consensus 153 ~gk~~lVl-GaGG~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 153 IGKKMTIC-GAGGAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp TTSEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred cCCEEEEE-CCChHHHHHHHHHHHCCCCEEEEEEC
Confidence 35666666 55777778888999999977876643
No 272
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.23 E-value=95 Score=18.53 Aligned_cols=6 Identities=33% Similarity=0.800 Sum_probs=2.2
Q ss_pred HHHCCC
Q 031359 134 LLNAGF 139 (161)
Q Consensus 134 L~~~G~ 139 (161)
|...||
T Consensus 22 l~~~g~ 27 (122)
T 3gl9_A 22 LKKEGY 27 (122)
T ss_dssp HHHTTC
T ss_pred HHHCCc
Confidence 333333
No 273
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=29.19 E-value=77 Score=26.84 Aligned_cols=38 Identities=11% Similarity=0.129 Sum_probs=31.2
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..+.++||+|+.-.....+...|...|+. +..++|++.
T Consensus 570 ~~g~kvLIFsq~~~~ld~L~~~L~~~g~~-~~~i~G~~~ 607 (800)
T 3mwy_W 570 KDGHRVLIFSQMVRMLDILGDYLSIKGIN-FQRLDGTVP 607 (800)
T ss_dssp TTTCCEEEEESCHHHHHHHHHHHHHHTCC-CEEESTTSC
T ss_pred hCCCeEEEEechHHHHHHHHHHHHhCCCC-EEEEeCCCC
Confidence 45678999999877888899999999985 667899864
No 274
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=29.19 E-value=78 Score=23.20 Aligned_cols=34 Identities=24% Similarity=0.143 Sum_probs=24.9
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.++.++|. +.|..+..++..|.+.|+.+|.+++-
T Consensus 125 ~~k~vlvl-GaGg~g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 125 KGATILLI-GAGGAARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHTTCCSEEEEEES
T ss_pred cCCEEEEE-CchHHHHHHHHHHHhcCCCeEEEEEC
Confidence 35566666 55777777888999999877887653
No 275
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=29.19 E-value=44 Score=22.53 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=23.6
Q ss_pred CeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccHH
Q 031359 115 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 115 ~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..|+|+|.+. -||..|...|+.+. .++.+...|..
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~ 58 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLG 58 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETT
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecC
Confidence 3799999864 58877777777664 23555555653
No 276
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=29.19 E-value=41 Score=23.57 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=36.2
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCC--CcceeEecc
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAG--FAGITDIAG 147 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G--~~~v~~l~G 147 (161)
...+......+.++..+++++............|++.| |..+..+.-
T Consensus 174 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 174 ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEE
Confidence 34677777777778888999887777778888999999 887765543
No 277
>2wv9_A Flavivirin protease NS2B regulatory subunit, FLAV protease NS3 catalytic subunit; nucleotide-binding, capsid protein; 2.75A {Murray valley encephalitis virus}
Probab=28.65 E-value=58 Score=27.19 Aligned_cols=35 Identities=20% Similarity=0.011 Sum_probs=29.5
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
...+++|+|++-..+..++..|+..|+ ++..|.|.
T Consensus 409 ~~~~~lVF~~s~~~~e~la~~L~~~g~-~v~~lHg~ 443 (673)
T 2wv9_A 409 YAGKTVWFVASVKMSNEIAQCLQRAGK-RVIQLNRK 443 (673)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCC-eEEEeChH
Confidence 456789999998889899999999998 47778874
No 278
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=28.33 E-value=52 Score=25.99 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=31.8
Q ss_pred HHHHHHhc-CCCCCeEEEEeCCchhHHHHHHHHHHC--CCcceeEecccHHHHh
Q 031359 103 FVEEVSTR-FRKHDEIIVGCQSGKRSMMAATDLLNA--GFAGITDIAGGFAAWR 153 (161)
Q Consensus 103 ~~~~~~~~-l~~~~~ivv~c~~g~~a~~~~~~L~~~--G~~~v~~l~GG~~~W~ 153 (161)
.+.+.+.+ ++ .-.-|++|++|..|..+|..|.+. |-++|..+.|+|.+|.
T Consensus 131 ~lae~l~~~~p-~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t 183 (454)
T 4ao9_A 131 RLARLICERFP-QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGV 183 (454)
T ss_dssp HHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTT
T ss_pred HHHHHHHHhCC-CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCcc
Confidence 34444333 44 344577889998888777766442 6556767788887654
No 279
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=28.28 E-value=62 Score=24.87 Aligned_cols=27 Identities=26% Similarity=0.441 Sum_probs=21.6
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
+.+|++-..+|.-|..++..|++.||+
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~ 35 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYD 35 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCc
Confidence 456777777788888899999999985
No 280
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=28.00 E-value=84 Score=23.09 Aligned_cols=34 Identities=18% Similarity=0.072 Sum_probs=25.1
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.++.++|+ +.|..+..++..|.+.|+.+|.+++-
T Consensus 140 ~~~~vlVl-GaGg~g~aia~~L~~~G~~~V~v~nR 173 (297)
T 2egg_A 140 DGKRILVI-GAGGGARGIYFSLLSTAAERIDMANR 173 (297)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHTTTCSEEEEECS
T ss_pred CCCEEEEE-CcHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 35566666 55777778888999999877887653
No 281
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=27.46 E-value=66 Score=25.51 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=27.5
Q ss_pred HHHhcCCCCCeEEEEeCCchhHHHHHHHHHH-----CCCc---ceeEecccHHHH
Q 031359 106 EVSTRFRKHDEIIVGCQSGKRSMMAATDLLN-----AGFA---GITDIAGGFAAW 152 (161)
Q Consensus 106 ~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~-----~G~~---~v~~l~GG~~~W 152 (161)
.+.+..+.+-.-|++|++|..|..+|..|.. .|.. .+-.+.|||.++
T Consensus 119 ~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~ 173 (473)
T 4e3q_A 119 KLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGV 173 (473)
T ss_dssp HHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCS
T ss_pred HHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCC
Confidence 3334445455568899999877766665532 3432 344566766543
No 282
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=27.45 E-value=1e+02 Score=22.74 Aligned_cols=39 Identities=13% Similarity=0.281 Sum_probs=27.1
Q ss_pred CCCCCeEEEEeCCchhHHHHHHHHHHC----CCccee--EecccH
Q 031359 111 FRKHDEIIVGCQSGKRSMMAATDLLNA----GFAGIT--DIAGGF 149 (161)
Q Consensus 111 l~~~~~ivv~c~~g~~a~~~~~~L~~~----G~~~v~--~l~GG~ 149 (161)
+.++++|+|.+.+|..|..++..|.+. |++++. .++-|+
T Consensus 21 ~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHML 65 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCS
T ss_pred CCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCC
Confidence 456778888888888888888888765 665243 455554
No 283
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=27.42 E-value=24 Score=28.04 Aligned_cols=37 Identities=14% Similarity=0.283 Sum_probs=27.2
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
...+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 356 ~~~~~LVF~~s~~~a~~l~~~L~~~~~~-v~~~hg~~~ 392 (508)
T 3fho_A 356 TIGQSIIFCKKKDTAEEIARRMTADGHT-VACLTGNLE 392 (508)
T ss_dssp -CCCEEEBCSSTTTTTHHHHHHTTTTCC-CCEEC----
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 3567899999988888999999999874 777888764
No 284
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=27.37 E-value=84 Score=23.23 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=25.8
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.++++.+ +|.....++..|++.|-+.++.
T Consensus 202 ~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 236 (286)
T 3lrt_A 202 NGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYV 236 (286)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEE
Confidence 4677888764 6888889999999999887663
No 285
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=27.37 E-value=72 Score=26.27 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=28.9
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
...++|+|++-..+..++..|+..|+. +..+.|.
T Consensus 355 ~~~~LVF~~s~~~a~~l~~~L~~~g~~-v~~lhg~ 388 (618)
T 2whx_A 355 QGKTVWFVPSIKAGNDIANCLRKSGKR-VIQLSRK 388 (618)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTT
T ss_pred CCCEEEEECChhHHHHHHHHHHHcCCc-EEEEChH
Confidence 457899999999999999999999984 7777775
No 286
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=27.33 E-value=1.2e+02 Score=19.03 Aligned_cols=24 Identities=21% Similarity=0.235 Sum_probs=11.3
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.|+++.+...........|...||
T Consensus 9 ~ILivdd~~~~~~~l~~~L~~~g~ 32 (154)
T 3gt7_A 9 EILIVEDSPTQAEHLKHILEETGY 32 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTC
T ss_pred cEEEEeCCHHHHHHHHHHHHHCCC
Confidence 344444444444444455555555
No 287
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=27.25 E-value=77 Score=21.19 Aligned_cols=44 Identities=18% Similarity=0.198 Sum_probs=29.8
Q ss_pred HHHhcCCCCCeEEEEeCCc--hhHHHHHHHHHH---CCCcceeEecccHHH
Q 031359 106 EVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGFAA 151 (161)
Q Consensus 106 ~~~~~l~~~~~ivv~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~~~ 151 (161)
.+...++++ .+|+.+-.| ..|...|..|.. .| .++..+-||-.+
T Consensus 59 ~il~~i~~~-~vi~Ld~~Gk~~sS~~fA~~l~~~~~~g-~~i~FvIGG~~G 107 (155)
T 1ns5_A 59 QMLAAAGKN-RIVTLDIPGKPWDTPQLAAELERWKLDG-RDVSLLIGGPEG 107 (155)
T ss_dssp HHHHHHTTS-EEEEEEEEEECCCHHHHHHHHHHHHHHC-SCEEEEECBTTB
T ss_pred HHHHhcCCC-cEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 344556655 577777766 467778877765 47 678888888644
No 288
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=27.16 E-value=1e+02 Score=18.37 Aligned_cols=23 Identities=13% Similarity=0.030 Sum_probs=9.6
Q ss_pred EEEEeCCchhHHHHHHHHHHCCC
Q 031359 117 IIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 117 ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
|+++.+...........|.+.||
T Consensus 9 ilivdd~~~~~~~l~~~L~~~g~ 31 (132)
T 3lte_A 9 ILVVDDDQAMAAAIERVLKRDHW 31 (132)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHCCc
Confidence 44443333333344444444444
No 289
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=27.15 E-value=52 Score=25.37 Aligned_cols=27 Identities=30% Similarity=0.434 Sum_probs=19.8
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
+.+|++-..+|..|..++..|++.||+
T Consensus 17 ~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 17 AKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 456666666777788888888888875
No 290
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=27.11 E-value=78 Score=24.42 Aligned_cols=32 Identities=19% Similarity=-0.010 Sum_probs=26.3
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 144 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~ 144 (161)
+++.+|++.+ +|.....++..|++.|-+.|+.
T Consensus 271 ~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 305 (379)
T 2ji4_A 271 GGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV 305 (379)
T ss_dssp TTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEE
Confidence 4678888765 6888889999999999887764
No 291
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=27.10 E-value=90 Score=24.45 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=26.0
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
.++.|+|+ ++|..+..++..+.+.|.++|.++.
T Consensus 263 ~gk~VvVI-GgG~~a~d~A~~~~r~Ga~~Vtiv~ 295 (456)
T 2vdc_G 263 AGKHVVVL-GGGDTAMDCVRTAIRQGATSVKCLY 295 (456)
T ss_dssp CCSEEEEE-CSSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE-CCChhHHHHHHHHHHcCCCEEEEEE
Confidence 45677777 7788888999999999987788654
No 292
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=26.88 E-value=13 Score=27.80 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=0.0
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
..+++++|++-..+..++..|+..|+. +..+.|++.
T Consensus 259 ~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 294 (394)
T 1fuu_A 259 VTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 294 (394)
T ss_dssp -------------------------------------
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCe-EEEeeCCCC
Confidence 457899999988888899999998874 777888764
No 293
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=26.79 E-value=1.3e+02 Score=19.41 Aligned_cols=32 Identities=25% Similarity=0.454 Sum_probs=20.7
Q ss_pred HHHHHHHHHHCCCcceeEecccHHHHh-hCCCCCC
Q 031359 127 SMMAATDLLNAGFAGITDIAGGFAAWR-QNGLPTE 160 (161)
Q Consensus 127 a~~~~~~L~~~G~~~v~~l~GG~~~W~-~~g~p~~ 160 (161)
....+..|..+||+ ++ -.||...|. +.|++++
T Consensus 39 l~~~a~~l~~lGf~-i~-AT~GTa~~L~~~Gi~v~ 71 (143)
T 2yvq_A 39 FLGVAEQLHNEGFK-LF-ATEATSDWLNANNVPAT 71 (143)
T ss_dssp HHHHHHHHHTTTCE-EE-EEHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHCCCE-EE-ECchHHHHHHHcCCeEE
Confidence 44577888999995 54 345665554 4577664
No 294
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=26.76 E-value=1.1e+02 Score=18.53 Aligned_cols=38 Identities=5% Similarity=-0.049 Sum_probs=29.4
Q ss_pred HHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 103 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 103 ~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
.....+..+..++.+.|..+.......+..+++..||+
T Consensus 42 ~tkkaL~~l~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~ 79 (98)
T 1jdq_A 42 ETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHE 79 (98)
T ss_dssp HHHHHHHTCCTTCEEEEEESSCTHHHHHHHHHHHSSCC
T ss_pred HHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 34556677888888888877766666888899999996
No 295
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=26.70 E-value=2e+02 Score=21.99 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=29.6
Q ss_pred HHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 103 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 103 ~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
....+...+...+.++++ ++|..+..+|..|.+.|. +|.++.
T Consensus 138 d~~~l~~~l~~~~~vvVi-GgG~~g~E~A~~l~~~G~-~Vtlv~ 179 (431)
T 1q1r_A 138 DAECIRRQLIADNRLVVI-GGGYIGLEVAATAIKANM-HVTLLD 179 (431)
T ss_dssp HHHHHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred HHHHHHHHhhcCCeEEEE-CCCHHHHHHHHHHHhCCC-EEEEEE
Confidence 333444445556777776 677888899999999997 477654
No 296
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=26.57 E-value=2e+02 Score=21.73 Aligned_cols=43 Identities=14% Similarity=0.167 Sum_probs=30.7
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 102 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+....+...+...+.++|+ ++|..+..++..|.+.|. +|.++.
T Consensus 131 ~d~~~l~~~~~~~~~vvVi-GgG~~g~E~A~~l~~~g~-~Vtvv~ 173 (410)
T 3ef6_A 131 GDVQVLRDSWTSATRLLIV-GGGLIGCEVATTARKLGL-SVTILE 173 (410)
T ss_dssp HHHHHHHHHCCTTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred HHHHHHHHHhccCCeEEEE-CCCHHHHHHHHHHHhCCC-eEEEEe
Confidence 3444444456667777777 677888899999999997 477654
No 297
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=26.38 E-value=76 Score=24.49 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=23.5
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
...|+|+ ++|.....+|..|.+.|+ +|.+++
T Consensus 16 ~~~v~ii-G~G~~Gl~aa~~l~~~g~-~v~v~E 46 (478)
T 2ivd_A 16 GMNVAVV-GGGISGLAVAHHLRSRGT-DAVLLE 46 (478)
T ss_dssp -CCEEEE-CCBHHHHHHHHHHHTTTC-CEEEEC
T ss_pred CCcEEEE-CCCHHHHHHHHHHHHCCC-CEEEEE
Confidence 3456666 777888888999999998 587775
No 298
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=26.31 E-value=66 Score=22.70 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=25.0
Q ss_pred CCCeEEEEeCCc-hhHHHHHHHHHHCCCcceeEecccH
Q 031359 113 KHDEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 113 ~~~~ivv~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
....|+|+|.+. -||..+...|+.+.-+++.+...|.
T Consensus 80 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 80 PVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 356899999865 5787777777776434555555554
No 299
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=26.30 E-value=1.1e+02 Score=18.33 Aligned_cols=11 Identities=18% Similarity=0.247 Sum_probs=4.3
Q ss_pred HHHHHHHHCCC
Q 031359 129 MAATDLLNAGF 139 (161)
Q Consensus 129 ~~~~~L~~~G~ 139 (161)
.....|...|+
T Consensus 17 ~l~~~L~~~~~ 27 (140)
T 1k68_A 17 LIQEALANSTV 27 (140)
T ss_dssp HHHHHHHTCSS
T ss_pred HHHHHHHhcCC
Confidence 33334444443
No 300
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=26.07 E-value=92 Score=23.55 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=24.3
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
++++|.|+ ++|..+..++..++++|++ +.+++
T Consensus 13 ~~k~IlIl-G~G~~g~~la~aa~~~G~~-vi~~d 44 (389)
T 3q2o_A 13 PGKTIGII-GGGQLGRMMALAAKEMGYK-IAVLD 44 (389)
T ss_dssp TTSEEEEE-CCSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHcCCE-EEEEe
Confidence 45666666 6777888899999999995 66555
No 301
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=26.05 E-value=16 Score=26.40 Aligned_cols=46 Identities=9% Similarity=0.174 Sum_probs=34.5
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 102 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
..+......+.++..+++++........+...|++.||..+..+.-
T Consensus 194 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 194 NYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp GTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEE
Confidence 5666666667777888888887666677888888999987665543
No 302
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=26.05 E-value=1.4e+02 Score=25.42 Aligned_cols=35 Identities=14% Similarity=0.059 Sum_probs=27.2
Q ss_pred CCeEEEEeCCc----hhHHHHHHHHHHCCCcceeEeccc
Q 031359 114 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 114 ~~~ivv~c~~g----~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
+-.+|.+|..- .....+...|++.|..++.++.||
T Consensus 655 ~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG 693 (762)
T 2xij_A 655 DVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGG 693 (762)
T ss_dssp TCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 56688888742 344568889999999889999998
No 303
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=25.99 E-value=1.2e+02 Score=18.46 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=16.2
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
..|+++.+...........|...||. |.....+
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~~-v~~~~~~ 40 (142)
T 3cg4_A 8 GDVMIVDDDAHVRIAVKTILSDAGFH-IISADSG 40 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE-EEEESSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCeE-EEEeCCH
Confidence 34555544444444555556656653 4433333
No 304
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=25.83 E-value=83 Score=22.46 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=25.9
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
+.+|+++ +.|.-...++..|...|+.++.+++..
T Consensus 28 ~~~Vlvv-G~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLII-GLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEE-CCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEE-ccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4566665 555566689999999999988888764
No 305
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=25.82 E-value=1.2e+02 Score=18.41 Aligned_cols=36 Identities=8% Similarity=-0.095 Sum_probs=21.9
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 150 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 150 (161)
...|+++.+...........|...||. |.....+-.
T Consensus 18 ~~~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~ 53 (137)
T 2pln_A 18 SMRVLLIEKNSVLGGEIEKGLNVKGFM-ADVTESLED 53 (137)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCE-EEEESCHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCcE-EEEeCCHHH
Confidence 455666666656666677777777773 554444433
No 306
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=25.72 E-value=78 Score=19.38 Aligned_cols=27 Identities=19% Similarity=0.057 Sum_probs=17.4
Q ss_pred EEEEeC-CchhHHHHHHHHHHCCCccee
Q 031359 117 IIVGCQ-SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 117 ivv~c~-~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+|+|+= +..+...++..|+..|+..|.
T Consensus 6 lV~YDI~~~kr~~kv~k~L~~yGl~rvQ 33 (101)
T 2ivy_A 6 LIFYDITDDNLRNRVAEFLKKKGLDRIQ 33 (101)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCChHHHHHHHHHHHHhCChhcc
Confidence 455653 345667888888888865443
No 307
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=25.68 E-value=1e+02 Score=17.81 Aligned_cols=38 Identities=3% Similarity=-0.028 Sum_probs=28.4
Q ss_pred HHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 103 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 103 ~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
.....+..+..+..+.|..+.......+..+++..||+
T Consensus 26 ~~kkal~~l~~G~~l~V~~dd~~a~~di~~~~~~~G~~ 63 (82)
T 3lvj_C 26 MVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHE 63 (82)
T ss_dssp HHHHHHHTSCTTCEEEEEECCTTHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 34556667777888877777766666788889999996
No 308
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=25.61 E-value=1.3e+02 Score=19.07 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=24.0
Q ss_pred HHHHHHhcCCCCCeEEEEeCC-chhHHHHHHHHHHCCCcceeEecc
Q 031359 103 FVEEVSTRFRKHDEIIVGCQS-GKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 103 ~~~~~~~~l~~~~~ivv~c~~-g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.+.+....++.++.|++.++- |..-..++..+... ..++.++.|
T Consensus 47 ~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~-~~~v~vi~G 91 (135)
T 1pdo_A 47 KYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVD-KEHYEVIAG 91 (135)
T ss_dssp HHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHHTT-CTTEEEEES
T ss_pred HHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHhc-cCCEEEEeC
Confidence 344555556666678888875 43323334333332 346777755
No 309
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=25.61 E-value=1.4e+02 Score=19.16 Aligned_cols=42 Identities=10% Similarity=0.101 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCCCeEEEEeCC---chhHHHHHHHHHHCCCcceeEecc
Q 031359 102 KFVEEVSTRFRKHDEIIVGCQS---GKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~c~~---g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
+.+..++ +..+.|.|+..+ |..+..++..|.+.||+ |+.++-
T Consensus 4 ~~l~~ll---~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~-v~~vnp 48 (140)
T 1iuk_A 4 QELRAYL---SQAKTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNP 48 (140)
T ss_dssp HHHHHHH---HHCCEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECG
T ss_pred HHHHHHH---cCCCEEEEECCCCCCCChHHHHHHHHHHCCCE-EEEeCC
Confidence 3455555 124668888665 45677888889999995 776543
No 310
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=25.45 E-value=1.1e+02 Score=21.70 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=23.7
Q ss_pred CCeEEEEeC---CchhHHHHHHHHHHCCC--cceeEe
Q 031359 114 HDEIIVGCQ---SGKRSMMAATDLLNAGF--AGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~---~g~~a~~~~~~L~~~G~--~~v~~l 145 (161)
++.|+++.. +|.....+...|++.|. +++.++
T Consensus 129 ~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~ 165 (217)
T 3dmp_A 129 DRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFL 165 (217)
T ss_dssp TCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEE
T ss_pred CCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEE
Confidence 456777654 67888888889999998 776643
No 311
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.43 E-value=1.9e+02 Score=24.58 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=27.1
Q ss_pred CCeEEEEeCCc----hhHHHHHHHHHHCCCcceeEeccc
Q 031359 114 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 114 ~~~ivv~c~~g----~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
+-.+|.+|..- .....+...|++.|..++.++-||
T Consensus 647 ~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG 685 (727)
T 1req_A 647 DVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGG 685 (727)
T ss_dssp TCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcC
Confidence 56688888742 244568889999999889999998
No 312
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=25.42 E-value=91 Score=22.09 Aligned_cols=49 Identities=27% Similarity=0.342 Sum_probs=27.5
Q ss_pred hcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 77 SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 77 ~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
..|||.+.-.+|... .+ .+++|+|+ +.|..+...+..|.+.|. +|.++.
T Consensus 13 ~~~~~~~~~~~Pifl------------------~L-~gk~VLVV-GgG~va~~ka~~Ll~~GA-~VtVva 61 (223)
T 3dfz_A 13 SSGHIEGRHMYTVML------------------DL-KGRSVLVV-GGGTIATRRIKGFLQEGA-AITVVA 61 (223)
T ss_dssp ---------CCEEEE------------------CC-TTCCEEEE-CCSHHHHHHHHHHGGGCC-CEEEEC
T ss_pred ccCcccccCccccEE------------------Ec-CCCEEEEE-CCCHHHHHHHHHHHHCCC-EEEEEC
Confidence 468888888888721 11 25667666 677888888888988897 577664
No 313
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=25.25 E-value=1.3e+02 Score=21.41 Aligned_cols=24 Identities=29% Similarity=0.379 Sum_probs=18.5
Q ss_pred CchhHHHHHHHHHHCCCcceeEecc
Q 031359 123 SGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 123 ~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
+|.....+|..|.+.|++ |.++.+
T Consensus 33 Sg~iG~aiA~~~~~~Ga~-V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGAN-VTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccHHHHHHHHHHHHCCCE-EEEEEC
Confidence 477888899999999985 665544
No 314
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=25.21 E-value=76 Score=24.00 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=27.0
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
+..|+++ +.|.-...++..|...|+.++.++++.
T Consensus 36 ~~~Vliv-G~GGlG~~ia~~La~~Gvg~itlvD~d 69 (346)
T 1y8q_A 36 ASRVLLV-GLKGLGAEIAKNLILAGVKGLTMLDHE 69 (346)
T ss_dssp TCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEE-CCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4455554 777778899999999999999888764
No 315
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=25.19 E-value=1.3e+02 Score=18.97 Aligned_cols=45 Identities=9% Similarity=0.238 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCCCCeEEEEeC-----CchhHHHHHHHHHHCCCcceeEecc
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQ-----SGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~-----~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.+.+-...-.++.++.+.+.+. .|.. ......|++.||.+++ ++|
T Consensus 6 ~~qivd~il~~~egtri~iLAPvv~~rKg~~-~~ll~~l~~~Gf~Rvr-vDG 55 (119)
T 3fpn_A 6 IEQMVDRLLSYPERTKMQILAPIVSGKKGTH-AKTLEDIRKQGYVRVR-IDR 55 (119)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEEEEEEECSCC-HHHHHHHHHTTCCEEE-ETT
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEeeCCCCcH-HHHHHHHHhCCCeEEE-ECC
Confidence 3444444445777888877765 2333 4678889999998876 455
No 316
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=25.16 E-value=1.1e+02 Score=23.33 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=24.5
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
...|+|+ +.|.....+|..|.+.|+ +|.+++.
T Consensus 44 ~~~V~II-GAGiaGL~aA~~L~~~G~-~V~VlE~ 75 (376)
T 2e1m_A 44 PKRILIV-GAGIAGLVAGDLLTRAGH-DVTILEA 75 (376)
T ss_dssp CCEEEEE-CCBHHHHHHHHHHHHTSC-EEEEECS
T ss_pred CceEEEE-CCCHHHHHHHHHHHHCCC-cEEEEec
Confidence 4456665 788888889999999998 5777764
No 317
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=25.11 E-value=85 Score=22.94 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=23.8
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+.+.|+|...+|.-...++..|.+.|++ |..+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~ 49 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRT-VRGF 49 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCC-EEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCE-EEEE
Confidence 3567888878898888999999999984 6654
No 318
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination-DNA binding COM; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=25.07 E-value=77 Score=26.09 Aligned_cols=36 Identities=8% Similarity=0.114 Sum_probs=30.1
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
.+.++||+|+.-.....+...|...|+. +..++|++
T Consensus 415 ~~~k~lIFs~~~~~~~~l~~~l~~~g~~-~~~l~G~~ 450 (644)
T 1z3i_X 415 TSDKVVLVSNYTQTLDLFEKLCRNRRYL-YVRLDGTM 450 (644)
T ss_dssp CCCEEEEEESCHHHHHHHHHHHHHHTCC-EEEECSSC
T ss_pred CCCEEEEEEccHHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 4678999999887888888999999985 66789986
No 319
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=25.06 E-value=1e+02 Score=24.33 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=25.5
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCC--cceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGF--AGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~--~~v~~l~ 146 (161)
.+++++++ +.|.-+..++..|...|. +++++++
T Consensus 185 ~~~rvlvl-GAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALF-GAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEE-CCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEE-CccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 35667666 667777788999999999 7888776
No 320
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=25.05 E-value=1e+02 Score=23.31 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
+.++|.++ ++|..+..++..++++|++ +.+++.
T Consensus 11 ~~~~IlIl-G~G~lg~~la~aa~~lG~~-viv~d~ 43 (377)
T 3orq_A 11 FGATIGII-GGGQLGKMMAQSAQKMGYK-VVVLDP 43 (377)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHCCCE-EEEEEC
Confidence 45566665 7788888999999999995 666653
No 321
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=25.03 E-value=1.1e+02 Score=18.04 Aligned_cols=6 Identities=0% Similarity=-0.335 Sum_probs=2.3
Q ss_pred HHHCCC
Q 031359 134 LLNAGF 139 (161)
Q Consensus 134 L~~~G~ 139 (161)
+....+
T Consensus 42 ~~~~~~ 47 (120)
T 3f6p_A 42 VEELQP 47 (120)
T ss_dssp HHTTCC
T ss_pred HhhCCC
Confidence 333333
No 322
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=24.69 E-value=2e+02 Score=20.78 Aligned_cols=104 Identities=19% Similarity=0.135 Sum_probs=55.7
Q ss_pred CCcccCHHHHHHHHhCCCEEE-EcCChhhHhcCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEeCCc-
Q 031359 48 VPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG- 124 (161)
Q Consensus 48 ~~~~i~~~~~~~~~~~~~~li-DvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g- 124 (161)
-+..+|...++.+.+.+.++. |.+-..+...-.-+++.-+... ... .+..+.+.+.+..++.|++.+.+.
T Consensus 32 d~~~LT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~g~~Vv~L~~GDP 104 (285)
T 1cbf_A 32 DPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKTA-------GMHLEEMVGTMLDRMREGKMVVRVHTGDP 104 (285)
T ss_dssp CGGGSCHHHHHHHHHCSEEEECTTTSCHHHHTTSCTTCEEEECT-------TCCHHHHHHHHHHHHTTTCCEEEEESBCT
T ss_pred CHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHhcCCCCEEEecC-------CCCHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 345678887777777776666 6554434332222344333221 011 233444444455566777776532
Q ss_pred ---hhHHHHHHHHHHCCCcceeEeccc---HHHHhhCCCCC
Q 031359 125 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 159 (161)
Q Consensus 125 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 159 (161)
.........|.+.|++ +.++.|= ..+....|.|+
T Consensus 105 ~i~g~~~~l~~~l~~~gi~-veviPGiSS~~aa~a~~G~pl 144 (285)
T 1cbf_A 105 AMYGAIMEQMVLLKREGVD-IEIVPGVTSVFAAAAAAEAEL 144 (285)
T ss_dssp TTTCCCHHHHHHHHHTTCE-EEEECCCCHHHHHHHHTTCCS
T ss_pred cccccHHHHHHHHHHCCCc-EEEECCchHHHHHHHHcCCCc
Confidence 2344566777788874 7777662 12344567664
No 323
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=24.46 E-value=88 Score=24.26 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=23.7
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
...|||+ ++|.....+|..|.+.|++ |.+++
T Consensus 11 ~~dvvVI-GaG~~GL~aA~~La~~G~~-V~vlE 41 (453)
T 2bcg_G 11 DYDVIVL-GTGITECILSGLLSVDGKK-VLHID 41 (453)
T ss_dssp BCSEEEE-CCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred cCCEEEE-CcCHHHHHHHHHHHHCCCe-EEEEe
Confidence 3456555 7888888999999999984 77765
No 324
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=24.45 E-value=1.3e+02 Score=18.33 Aligned_cols=23 Identities=22% Similarity=0.257 Sum_probs=9.3
Q ss_pred EEEEeCCchhHHHHHHHHHHCCC
Q 031359 117 IIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 117 ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
|+++.+...........|...||
T Consensus 7 iLivdd~~~~~~~l~~~L~~~g~ 29 (142)
T 2qxy_A 7 VMVVDESRITFLAVKNALEKDGF 29 (142)
T ss_dssp EEEECSCHHHHHHHHHHHGGGTC
T ss_pred EEEEeCCHHHHHHHHHHHHhCCC
Confidence 33433333333334444444444
No 325
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=24.30 E-value=1.2e+02 Score=17.93 Aligned_cols=37 Identities=5% Similarity=-0.002 Sum_probs=28.1
Q ss_pred HHHHHhcCC-CCCeEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 104 VEEVSTRFR-KHDEIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 104 ~~~~~~~l~-~~~~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
....+..++ .+..+.|..+.......+..+++..||.
T Consensus 18 ~kkal~~l~~~G~~L~V~~dd~~a~~dI~~~~~~~G~~ 55 (87)
T 3hz7_A 18 AKKALAELGEAGGVVTVLVDNDISRQNLQKMAEGMGYQ 55 (87)
T ss_dssp HHHHHHTTGGGCCEEEEEESSHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHhccCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 445566676 7788888877766666788899999996
No 326
>2g3w_A YAEQ protein, hypothetical protein XAC2396; xanthomonas axonopodis PV citri, unknown funct; HET: MSE; 1.90A {Xanthomonas axonopodis PV} SCOP: c.52.1.33
Probab=24.23 E-value=1.8e+02 Score=20.06 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=24.3
Q ss_pred CCHHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHH--HCCCcceeEe
Q 031359 99 KNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL--NAGFAGITDI 145 (161)
Q Consensus 99 ~~~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~--~~G~~~v~~l 145 (161)
++++.+.+.-. +.+.|+|||.++..+..-+...+ -..++|+.++
T Consensus 87 Pde~rl~KA~~---ra~~V~vy~yg~~~~~vWw~~~~~kl~r~~nl~V~ 132 (182)
T 2g3w_A 87 PDESRVRKACN---RSREAVVIGYGGQATETWWKKHANAMGRYRNLRVI 132 (182)
T ss_dssp CCHHHHHHHHH---HSSEEEEEECCTHHHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCHHHHHHhhc---cCCeEEEEecCCchHHHHHHHhHHHHhCcCCcEEE
Confidence 44555555443 46689999988655433333222 2356666654
No 327
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=24.16 E-value=1.2e+02 Score=22.17 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=24.2
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+++++|+ +.|..+..++..|.+.| .+|.+++
T Consensus 118 ~k~vlvl-GaGGaaraia~~L~~~G-~~v~V~n 148 (269)
T 3phh_A 118 YQNALIL-GAGGSAKALACELKKQG-LQVSVLN 148 (269)
T ss_dssp CCEEEEE-CCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEE-CCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 6677776 56777888899999999 6787764
No 328
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=24.06 E-value=1.3e+02 Score=18.26 Aligned_cols=13 Identities=15% Similarity=0.107 Sum_probs=6.2
Q ss_pred EEEeCCchhHHHH
Q 031359 118 IVGCQSGKRSMMA 130 (161)
Q Consensus 118 vv~c~~g~~a~~~ 130 (161)
|..+.++..+...
T Consensus 30 v~~~~~~~~al~~ 42 (133)
T 2r25_B 30 IELACDGQEAFDK 42 (133)
T ss_dssp EEEESSHHHHHHH
T ss_pred EEEECCHHHHHHH
Confidence 4445555444433
No 329
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=24.06 E-value=1.2e+02 Score=18.17 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=17.6
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
..|+++.+...........|...||+ +.....+-
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~ 41 (136)
T 3hdv_A 8 PLVLVVDDNAVNREALILYLKSRGID-AVGADGAE 41 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCC-EEEESSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHHcCce-EEEeCCHH
Confidence 34555555544455556666666663 44444433
No 330
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=24.02 E-value=82 Score=23.49 Aligned_cols=71 Identities=13% Similarity=0.302 Sum_probs=33.9
Q ss_pred CCEEEEcCChhhHhcCCCC-CcEEeccccccCCCCCCCHHHHHH----HHhcC--CCCCeEEEEeCCc-hhHH-HHHHHH
Q 031359 64 GHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEE----VSTRF--RKHDEIIVGCQSG-KRSM-MAATDL 134 (161)
Q Consensus 64 ~~~liDvR~~~e~~~ghIp-gA~nip~~~~~~~~~~~~~~~~~~----~~~~l--~~~~~ivv~c~~g-~~a~-~~~~~L 134 (161)
.+.|+++.....|....+. .-.++|+.+.- .+..+.+.. ....+ .++.+|+|.|..| .|+. .++..|
T Consensus 58 ~~~v~nl~~e~~y~~~~~~~~~~~~~~~D~~----~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTGt~ia~yL 133 (324)
T 1d5r_A 58 HYKIYNLCAERHYDTAKFNCRVAQYPFEDHN----PPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYL 133 (324)
T ss_dssp CEEEEEEESSCCCCTTSCSSCEEEEEECTTS----CCCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHHHHHHHHH
T ss_pred cEEEEEcCCCCCCChHHhCCeEEEEeecCCC----CCcHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCChhHHHHHHHH
Confidence 3678888654344433332 23456653221 112222222 21112 3457899999987 4443 344444
Q ss_pred HHCC
Q 031359 135 LNAG 138 (161)
Q Consensus 135 ~~~G 138 (161)
...+
T Consensus 134 ~~~~ 137 (324)
T 1d5r_A 134 LHRG 137 (324)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 4433
No 331
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=24.02 E-value=1.1e+02 Score=23.65 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=25.7
Q ss_pred CCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 111 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 111 l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+-+.++|.+. ++|..+..++..++++|++ +.+++
T Consensus 32 ~~~~~~IlIl-G~G~lg~~~~~aa~~lG~~-v~v~d 65 (419)
T 4e4t_A 32 ILPGAWLGMV-GGGQLGRMFCFAAQSMGYR-VAVLD 65 (419)
T ss_dssp CCTTCEEEEE-CCSHHHHHHHHHHHHTTCE-EEEEC
T ss_pred CCCCCEEEEE-CCCHHHHHHHHHHHHCCCE-EEEEC
Confidence 3355666665 7778888899999999995 76665
No 332
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.98 E-value=1.1e+02 Score=21.16 Aligned_cols=31 Identities=19% Similarity=0.138 Sum_probs=18.3
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++.++|...+|.-...++..|.+.|+ +|..+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~ 43 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGA-RVIIA 43 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEE
Confidence 34555555556666666666767776 35543
No 333
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=23.85 E-value=1.4e+02 Score=18.52 Aligned_cols=24 Identities=13% Similarity=0.159 Sum_probs=11.3
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.|+++.+...........|...|+
T Consensus 6 ~ILivddd~~~~~~l~~~L~~~g~ 29 (152)
T 3heb_A 6 TIVMIEDDLGHARLIEKNIRRAGV 29 (152)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCC
Confidence 344444444444444455555554
No 334
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=23.81 E-value=84 Score=28.05 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=35.2
Q ss_pred HHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHC--CCcceeEecccHH
Q 031359 104 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNA--GFAGITDIAGGFA 150 (161)
Q Consensus 104 ~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~--G~~~v~~l~GG~~ 150 (161)
...+...+..+..++++|++-..+..++..|++. |+ ++..++|++.
T Consensus 802 ~~~il~~l~~g~qvlvf~~~v~~~~~l~~~L~~~~p~~-~v~~lhg~~~ 849 (1151)
T 2eyq_A 802 REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEA-RIAIGHGQMR 849 (1151)
T ss_dssp HHHHHHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTS-CEEECCSSCC
T ss_pred HHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHhCCCC-eEEEEeCCCC
Confidence 3444555666788999999888888899999887 65 5878898864
No 335
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=23.73 E-value=64 Score=22.63 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=24.5
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+-.++|.+...+.-+...|++.|++++.++
T Consensus 183 ~~ai~~~nD~~A~g~~~al~~~g~~dv~vv 212 (271)
T 2dri_A 183 VQAVFAQNDEMALGALRALQTAGKSDVMVV 212 (271)
T ss_dssp CCEEEESSHHHHHHHHHHHHHHTCCSCEEE
T ss_pred ccEEEECCCcHHHHHHHHHHHcCCCCcEEE
Confidence 446788888888899999999999777754
No 336
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=23.72 E-value=88 Score=22.28 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=27.1
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+..|+|+ +.|.-...++..|...|+.++.+++...
T Consensus 31 ~~~VlVv-G~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIV-GLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEE-eeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3556665 6777788999999999998888887653
No 337
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.71 E-value=1.4e+02 Score=18.54 Aligned_cols=24 Identities=4% Similarity=-0.108 Sum_probs=10.8
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.|+++.+...........|...||
T Consensus 9 ~iLivdd~~~~~~~l~~~L~~~g~ 32 (154)
T 2rjn_A 9 TVMLVDDEQPILNSLKRLIKRLGC 32 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTC
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCC
Confidence 344444443344444444554554
No 338
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=23.64 E-value=1.2e+02 Score=21.00 Aligned_cols=32 Identities=9% Similarity=-0.011 Sum_probs=21.2
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
++.++|...+|.-...++..|.+.|++ |..+.
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~-V~~~~ 42 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGAR-LILID 42 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEe
Confidence 455666666666667777778788874 65543
No 339
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=23.63 E-value=92 Score=22.77 Aligned_cols=17 Identities=24% Similarity=0.577 Sum_probs=12.5
Q ss_pred CCCCeEEEEeCCc-hhHH
Q 031359 112 RKHDEIIVGCQSG-KRSM 128 (161)
Q Consensus 112 ~~~~~ivv~c~~g-~~a~ 128 (161)
..+.+|||.|..| .|+.
T Consensus 207 ~~~~PivVHCsaGvGRTG 224 (287)
T 2b49_A 207 VDSEPVLVHCSAGIGRTG 224 (287)
T ss_dssp CTTCCEEEECSSSSHHHH
T ss_pred cCCCcEEEEcCCCCcHHH
Confidence 4468999999987 4444
No 340
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=23.62 E-value=1.2e+02 Score=17.77 Aligned_cols=8 Identities=38% Similarity=0.659 Sum_probs=3.0
Q ss_pred HHHHHCCC
Q 031359 132 TDLLNAGF 139 (161)
Q Consensus 132 ~~L~~~G~ 139 (161)
..|...||
T Consensus 23 ~~L~~~g~ 30 (127)
T 2gkg_A 23 SALEGRGF 30 (127)
T ss_dssp HHHHHHTC
T ss_pred HHHHhcCc
Confidence 33333333
No 341
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=23.58 E-value=1.3e+02 Score=18.14 Aligned_cols=13 Identities=15% Similarity=0.003 Sum_probs=5.3
Q ss_pred HHHHHCCCcceeEe
Q 031359 132 TDLLNAGFAGITDI 145 (161)
Q Consensus 132 ~~L~~~G~~~v~~l 145 (161)
..+....+ ++.++
T Consensus 41 ~~l~~~~~-dlvi~ 53 (140)
T 2qr3_A 41 TVLREENP-EVVLL 53 (140)
T ss_dssp HHHHHSCE-EEEEE
T ss_pred HHHHcCCC-CEEEE
Confidence 33444444 24444
No 342
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=23.54 E-value=93 Score=22.33 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=25.7
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
++++|+|+ ++|..+..+|..|.+.|. +|.++..
T Consensus 144 ~~k~vvVi-GgG~ig~E~A~~l~~~g~-~Vtlv~~ 176 (312)
T 4gcm_A 144 KNKRLFVI-GGGDSAVEEGTFLTKFAD-KVTIVHR 176 (312)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHTTTCS-EEEEECS
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHhcCC-EEEEEec
Confidence 45677777 778888899999999996 5776643
No 343
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=23.50 E-value=86 Score=24.84 Aligned_cols=50 Identities=22% Similarity=0.341 Sum_probs=35.1
Q ss_pred CCCCCeEEEEeC---CchhHHHHHHHHHHCCCcceeE---e---cccHHHHhhCCCCCC
Q 031359 111 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---I---AGGFAAWRQNGLPTE 160 (161)
Q Consensus 111 l~~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~~---l---~GG~~~W~~~g~p~~ 160 (161)
+.+++.|+++.+ +|.....+...|++.|-+-+.+ + .||-....+.|+|+.
T Consensus 362 ~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~~g~~~l~~~g~~v~ 420 (453)
T 3qw4_B 362 YKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDMGAKAFLNKLGYDFE 420 (453)
T ss_dssp CCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSSSHHHHHHHTTCCEE
T ss_pred cCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCcchHHHHHhcCCCEE
Confidence 456788888875 6888888999999999764332 2 356666667788764
No 344
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=23.45 E-value=98 Score=23.33 Aligned_cols=26 Identities=4% Similarity=0.091 Sum_probs=17.1
Q ss_pred CCHHHHHHH---HhcCCCCCeEEEEeCCc
Q 031359 99 KNLKFVEEV---STRFRKHDEIIVGCQSG 124 (161)
Q Consensus 99 ~~~~~~~~~---~~~l~~~~~ivv~c~~g 124 (161)
+.++.+... ...++.+..|+|.|..|
T Consensus 195 P~~e~id~fl~~v~~l~~~~~i~vHC~aG 223 (314)
T 3mmj_A 195 PTPENIDRFLAFYRTLPQDAWLHFHSEAG 223 (314)
T ss_dssp CCHHHHHHHHHHHHTCCTTCEEEEECSSS
T ss_pred CCHHHHHHHHHHHHHcCCCCCEEEECCCC
Confidence 344444433 33467788999999987
No 345
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=23.35 E-value=1.4e+02 Score=18.52 Aligned_cols=10 Identities=10% Similarity=-0.067 Sum_probs=3.9
Q ss_pred HHHHHHHCCC
Q 031359 130 AATDLLNAGF 139 (161)
Q Consensus 130 ~~~~L~~~G~ 139 (161)
....|...||
T Consensus 30 l~~~L~~~g~ 39 (153)
T 3hv2_A 30 LQQLLSPLPY 39 (153)
T ss_dssp HHHHHTTSSC
T ss_pred HHHHhcccCc
Confidence 3333333343
No 346
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=23.21 E-value=1e+02 Score=22.13 Aligned_cols=33 Identities=9% Similarity=0.043 Sum_probs=23.0
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
.+.+.|+|...+|.-...++..|.+.|+ +|..+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~ 42 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNV-EVFGT 42 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCC-EEEEE
Confidence 4566777777788888888888888887 46544
No 347
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=23.12 E-value=1.1e+02 Score=24.06 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=23.7
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
..|||+ +.|.....+|..|.+.|+.+|.+|+
T Consensus 9 ~~VvII-GaG~aGL~AA~~L~~~G~~~V~VlE 39 (516)
T 1rsg_A 9 KKVIII-GAGIAGLKAASTLHQNGIQDCLVLE 39 (516)
T ss_dssp EEEEEE-CCBHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CcEEEE-CCCHHHHHHHHHHHhcCCCCEEEEe
Confidence 456666 7788888899999999933588775
No 348
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=23.01 E-value=1.6e+02 Score=20.57 Aligned_cols=31 Identities=19% Similarity=0.012 Sum_probs=24.3
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++-.++|.++..+..+...|++.|..++.++
T Consensus 191 ~~~ai~~~~d~~a~g~~~al~~~g~~di~vv 221 (291)
T 3l49_A 191 DVGAIWACWDVPMIGATQALQAAGRTDIRTY 221 (291)
T ss_dssp SCCEEEESSHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CcCEEEECCCchHHHHHHHHHHcCCCCeEEE
Confidence 3446678888888889999999998666654
No 349
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=22.89 E-value=97 Score=24.13 Aligned_cols=38 Identities=11% Similarity=0.050 Sum_probs=29.8
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHC-CCcceeEecccHH
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNA-GFAGITDIAGGFA 150 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~-G~~~v~~l~GG~~ 150 (161)
..+.+++|+|..-..+..+...|... |+. +..++|++.
T Consensus 339 ~~~~k~lvF~~~~~~~~~l~~~l~~~~~~~-~~~~~g~~~ 377 (500)
T 1z63_A 339 DEGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGELS 377 (500)
T ss_dssp TTTCCEEEECSCHHHHHHHHHHHHHHHTCC-CCEEETTSC
T ss_pred ccCCcEEEEEehHHHHHHHHHHHHHhhCCC-eEEEECCCC
Confidence 46778999999887788888888875 874 667888863
No 350
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=22.86 E-value=87 Score=22.59 Aligned_cols=31 Identities=16% Similarity=0.036 Sum_probs=24.0
Q ss_pred CCeEEEEeC---CchhHHHHHHHHHHCCC--cceeE
Q 031359 114 HDEIIVGCQ---SGKRSMMAATDLLNAGF--AGITD 144 (161)
Q Consensus 114 ~~~ivv~c~---~g~~a~~~~~~L~~~G~--~~v~~ 144 (161)
++.|++++. +|.....+...|++.|. +++.+
T Consensus 156 ~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~~ 191 (243)
T 1bd3_D 156 ERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIF 191 (243)
T ss_dssp GSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCcceEEE
Confidence 466777764 68888888999999998 77664
No 351
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=22.74 E-value=88 Score=19.65 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=14.3
Q ss_pred EEEEeCCc-hhHHHHHHHHHHCC
Q 031359 117 IIVGCQSG-KRSMMAATDLLNAG 138 (161)
Q Consensus 117 ivv~c~~g-~~a~~~~~~L~~~G 138 (161)
|+|+|.+. -||..|...|+.+.
T Consensus 2 VLFVC~gN~cRSpmAEa~~~~~~ 24 (124)
T 1y1l_A 2 VLFVCIHNTARSVMAEALFNAMA 24 (124)
T ss_dssp EEEEESSCSSHHHHHHHHHHTTC
T ss_pred EEEEeCCChhHHHHHHHHHHHhc
Confidence 67777654 57766666666653
No 352
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=22.74 E-value=1e+02 Score=22.87 Aligned_cols=33 Identities=12% Similarity=0.155 Sum_probs=24.7
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHC-CCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNA-GFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~-G~~~v~~l~ 146 (161)
++.|+|...+|.-...++..|.+. |+.+|..+.
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~ 54 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS 54 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE
Confidence 567777777888777888888887 875677654
No 353
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=22.68 E-value=65 Score=26.84 Aligned_cols=121 Identities=10% Similarity=0.028 Sum_probs=0.0
Q ss_pred cccceeecccccccccccccccccccccCCCcccCHHHHHHHHhCCCEEE-----------------EcCChhhHhcCCC
Q 031359 19 RCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYL-----------------DVRTPEEFSAGHA 81 (161)
Q Consensus 19 ~~~~~~~l~gg~~~w~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~li-----------------DvR~~~e~~~ghI 81 (161)
|....|+++|.--.|....+-...--........-.+.+.++......++ ++.++.+...++=
T Consensus 419 REEshg~iNG~~vSw~~~~n~~N~G~s~~eve~~E~~ll~~l~g~~~~~~~~~~~~~~~~~~~~~~~~v~te~e~~~~~G 498 (629)
T 3f41_A 419 RQETHGVFNGNAVSWYGLRDWGNLGKNKAEVLKDENSRLNAARGKSLIVAELDKDKMPIDPKPVKIESVMTEQQLVEKNG 498 (629)
T ss_dssp ECSCEEEETTEEEEEEEGGGCTTTTCCHHHHHHHHHHHHHHHTTSEEEEECBCTTSCBSSCCEEECCCEECHHHHHHHTT
T ss_pred cccceeeECCcEEEcccCCCcCCCCCCHHHHHHHHHHHHHHhhCCCceeeecCCCCccccceecchhhhcCHHHHHHhCC
Q ss_pred CCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEeCCc----hhHHHHHHHHHHCCCc
Q 031359 82 TGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG----KRSMMAATDLLNAGFA 140 (161)
Q Consensus 82 pgA~nip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g----~~a~~~~~~L~~~G~~ 140 (161)
-.-..||..+...+....-..++..... ++++..|+|.|..| .....+..+++..++.
T Consensus 499 i~Y~Ripi~D~~aP~~e~id~fl~~v~~-lp~~~~v~vHC~aG~GRTtT~mv~y~m~k~~~~s 560 (629)
T 3f41_A 499 LHYYRIAATDHIWPSAANIDEFINFTRT-MPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVS 560 (629)
T ss_dssp CEEEEEEECTTSCCCHHHHHHHHHHHHH-SCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSC
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHHh-cCCCCCEEEeCCCCCchHHHHHHHHHHHHcCCCC
No 354
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=22.62 E-value=97 Score=18.95 Aligned_cols=28 Identities=7% Similarity=-0.113 Sum_probs=20.9
Q ss_pred CCCeEEEEeC-----C-chhHHHHHHHHHHCCCc
Q 031359 113 KHDEIIVGCQ-----S-GKRSMMAATDLLNAGFA 140 (161)
Q Consensus 113 ~~~~ivv~c~-----~-g~~a~~~~~~L~~~G~~ 140 (161)
.+.+||+|.. . ...+..+-..|.+.|++
T Consensus 14 ~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~ 47 (111)
T 3zyw_A 14 HAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQ 47 (111)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred hcCCEEEEEecCCCCCcchhHHHHHHHHHHcCCC
Confidence 3567888875 3 46777888899999875
No 355
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=22.61 E-value=1.1e+02 Score=22.45 Aligned_cols=35 Identities=11% Similarity=0.314 Sum_probs=26.0
Q ss_pred CCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 111 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 111 l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++++.+|+|+..+|......+..|.+.||+-++.+
T Consensus 4 ~~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~V 38 (288)
T 1oi7_A 4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGV 38 (288)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEE
Confidence 45677888887778878788888888898744433
No 356
>1pp7_U 39 kDa initiator binding protein; core promoter, transcription initation, IBP39, T. vaginalis, transcription/DNA complex; 2.45A {Trichomonas vaginalis} SCOP: a.4.5.44 PDB: 1pp8_U
Probab=22.55 E-value=9.3 Score=24.71 Aligned_cols=27 Identities=22% Similarity=0.683 Sum_probs=22.2
Q ss_pred HHHHHHCCCcceeEecccHHHHhhCCC
Q 031359 131 ATDLLNAGFAGITDIAGGFAAWRQNGL 157 (161)
Q Consensus 131 ~~~L~~~G~~~v~~l~GG~~~W~~~g~ 157 (161)
-.-|+.+||.+..-=.+||..|+..|+
T Consensus 84 NvNLRdL~F~Q~q~dk~g~T~W~~~gF 110 (131)
T 1pp7_U 84 NVNLRDLAFEQLQHDKGGWTQWKRSGF 110 (131)
T ss_dssp HHHHHHTTCEEEEEEETTEEEEECTTE
T ss_pred cccchhccceeeccccCceeEEecCCc
Confidence 346899999887776799999998875
No 357
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=22.52 E-value=1.1e+02 Score=19.09 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=19.1
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHC-CCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNA-GFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~-G~~~v~~l~ 146 (161)
.+++++| +.|..+..++..|... ||+-+.+++
T Consensus 4 ~~~vlIi-GaG~~g~~l~~~l~~~~g~~vvg~~d 36 (141)
T 3nkl_A 4 KKKVLIY-GAGSAGLQLANMLRQGKEFHPIAFID 36 (141)
T ss_dssp CEEEEEE-CCSHHHHHHHHHHHHSSSEEEEEEEC
T ss_pred CCEEEEE-CCCHHHHHHHHHHHhCCCcEEEEEEE
Confidence 3456666 5566667777777664 664333444
No 358
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=22.29 E-value=71 Score=19.99 Aligned_cols=27 Identities=15% Similarity=0.010 Sum_probs=21.2
Q ss_pred CCeEEEEeCC------chhHHHHHHHHHHCCCc
Q 031359 114 HDEIIVGCQS------GKRSMMAATDLLNAGFA 140 (161)
Q Consensus 114 ~~~ivv~c~~------g~~a~~~~~~L~~~G~~ 140 (161)
..+|++|..+ ...+..+-..|.+.|++
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~ 47 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVD 47 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBC
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCC
Confidence 5678888774 57788888899998875
No 359
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=22.11 E-value=1.3e+02 Score=24.99 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=27.9
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEecccH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 149 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 149 (161)
+.+|+|+ +.|.-.+.++..|...|+.++.+++...
T Consensus 326 ~arVLIV-GaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLL-GAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEE-CCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEE-CCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4566666 6777778999999999999999888754
No 360
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=22.07 E-value=1.8e+02 Score=19.84 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=24.4
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++-.++|.+...+..+...|++.|++++.++
T Consensus 172 ~~~ai~~~~d~~A~g~~~al~~~g~~di~vi 202 (255)
T 1byk_A 172 ETTALLCATDTLALGASKYLQEQRIDTLQLA 202 (255)
T ss_dssp TCCEEEESSHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCEEEEeChHHHHHHHHHHHHcCCCcEEEE
Confidence 3456778888888889999999998777653
No 361
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=22.01 E-value=1.4e+02 Score=20.87 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=23.7
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.++|...++.-...++..|.+.|++ |..+
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~ 49 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAE-VTIC 49 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEE
Confidence 3566777777777777888889899984 6654
No 362
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=22.00 E-value=2.6e+02 Score=21.76 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=25.3
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
...+.|+|+ ++|..+..+|..|.+.|. +|.++.
T Consensus 192 ~~~~~vvVI-GgG~ig~E~A~~l~~~g~-~Vtlv~ 224 (490)
T 2bc0_A 192 KDIKRVAVV-GAGYIGVELAEAFQRKGK-EVVLID 224 (490)
T ss_dssp TTCCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCceEEEE-CCCHHHHHHHHHHHHCCC-eEEEEE
Confidence 345667766 778888899999999997 577664
No 363
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription factor, RNA polymerase recycling, activator, ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Probab=21.97 E-value=90 Score=27.20 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=29.9
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHH-CCCcceeEecccH
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLN-AGFAGITDIAGGF 149 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~-~G~~~v~~l~GG~ 149 (161)
++..+||+|+.-..+..++..|.. .|+. +..++|++
T Consensus 502 ~~~k~iVF~~~~~~~~~l~~~L~~~~g~~-~~~lhG~~ 538 (968)
T 3dmq_A 502 RSQKVLVICAKAATALQLEQVLREREGIR-AAVFHEGM 538 (968)
T ss_dssp SSSCCCEECSSTHHHHHHHHHHHTTTCCC-EEEECTTS
T ss_pred CCCCEEEEeCcHHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 466789999998888899999994 6984 77899986
No 364
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=21.91 E-value=39 Score=23.60 Aligned_cols=45 Identities=7% Similarity=-0.010 Sum_probs=33.6
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 102 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
..+......+.++-.+++++............|++.||..+..++
T Consensus 179 ~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 179 KVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp GGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 566666666777778888888766666777888889997666544
No 365
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=21.78 E-value=1.7e+02 Score=22.06 Aligned_cols=42 Identities=14% Similarity=0.111 Sum_probs=26.3
Q ss_pred HHHhcCCCCCeEEEEeCC-c----hhHHHHHHHHHHCCCcceeEecc
Q 031359 106 EVSTRFRKHDEIIVGCQS-G----KRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 106 ~~~~~l~~~~~ivv~c~~-g----~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
++.+.++..+-+++.|+- | ..+..++..+++.|+.-+.++.+
T Consensus 73 eI~~~l~~aD~VFVtaGLGGGTGTGaAPVvAeiake~GalvVavVt~ 119 (315)
T 3r4v_A 73 ALMDTIPEADFYIVCYSLGGGSGSVLGPLITGQLADRKASFVSFVVG 119 (315)
T ss_dssp HHHHTSCCBSCEEEEEESSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHhcCCCCEEEEEeccCCccccchHHHHHHHHHHcCCCEEEEEec
Confidence 444456655555555553 2 34667888999999975555444
No 366
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=21.78 E-value=88 Score=17.78 Aligned_cols=38 Identities=11% Similarity=-0.027 Sum_probs=28.1
Q ss_pred HHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 103 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 103 ~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
.....+..+..+..+.|..+.......+..+++..||+
T Consensus 22 ~~k~al~~l~~G~~L~V~~dd~~a~~di~~~~~~~G~~ 59 (78)
T 1pav_A 22 ELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQE 59 (78)
T ss_dssp HHHHHHTTSCTTCCEECCBSSSCHHHHHHHHHHHHTEE
T ss_pred HHHHHHHcCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 45556777877877877777655556778889999985
No 367
>1zat_A L,D-transpeptidase; L,D-transpeptidation, peptidoglycan, beta-lactam insensitive transpeptidase, antibiotic resistance, transferase; 2.40A {Enterococcus faecium} SCOP: b.160.1.1 d.335.1.1 PDB: 2hkl_A
Probab=21.73 E-value=67 Score=22.89 Aligned_cols=19 Identities=16% Similarity=0.155 Sum_probs=16.1
Q ss_pred HHHHHHHhcCCCCCeEEEE
Q 031359 102 KFVEEVSTRFRKHDEIIVG 120 (161)
Q Consensus 102 ~~~~~~~~~l~~~~~ivv~ 120 (161)
+.+++++..++.+.+|+||
T Consensus 232 ~da~~l~~~v~~Gt~V~I~ 250 (250)
T 1zat_A 232 SVMKELFGMVEKGTPVLVF 250 (250)
T ss_dssp HHHHHHHHHCCTTCEEEEC
T ss_pred HHHHHHHhhCCCCCEEEeC
Confidence 6788888888889999875
No 368
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=21.69 E-value=1.4e+02 Score=21.17 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=18.9
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++.++|...+|.-...++..|.+.|++ |..+
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~-V~~~ 62 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLK-VVGC 62 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 455666655666666667777777763 5544
No 369
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=21.69 E-value=1.7e+02 Score=19.94 Aligned_cols=24 Identities=8% Similarity=0.047 Sum_probs=12.1
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
+|+|-+.+|..|..++..|.+.++
T Consensus 46 ~v~Va~SGGkDS~vLL~ll~~~~~ 69 (215)
T 1sur_A 46 EYVLSSSFGIQAAVSLHLVNQIRP 69 (215)
T ss_dssp EEEEECCCCTTHHHHHHHHHHHST
T ss_pred CEEEEecCCHHHHHHHHHHHHhCC
Confidence 444444455555555555555443
No 370
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=21.68 E-value=83 Score=23.92 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=24.5
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+.+.++|+ ++|..+..+|..|.+.|. +|.++.
T Consensus 145 ~~~~vvVI-GgG~~g~E~A~~l~~~g~-~Vtvv~ 176 (385)
T 3klj_A 145 NKGKAFII-GGGILGIELAQAIIDSGT-PASIGI 176 (385)
T ss_dssp HHSCEEEE-CCSHHHHHHHHHHHHHTC-CEEEEC
T ss_pred cCCeEEEE-CCCHHHHHHHHHHHhCCC-eEEEEE
Confidence 34567766 778888899999999997 477664
No 371
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=21.62 E-value=1.7e+02 Score=20.38 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=27.6
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEecccHHHHh
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWR 153 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~ 153 (161)
..|+++.++......+...|...||+ |.....|-.++.
T Consensus 130 ~~ILivdd~~~~~~~l~~~L~~~g~~-v~~a~~~~eal~ 167 (254)
T 2ayx_A 130 MMILVVDDHPINRRLLADQLGSLGYQ-CKTANDGVDALN 167 (254)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHTSE-EEEECCSHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCE-EEEECCHHHHHH
Confidence 45777777766667788888889984 776777766653
No 372
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=21.57 E-value=1.3e+02 Score=21.96 Aligned_cols=18 Identities=28% Similarity=0.373 Sum_probs=13.1
Q ss_pred CCCCCeEEEEeCCc-hhHH
Q 031359 111 FRKHDEIIVGCQSG-KRSM 128 (161)
Q Consensus 111 l~~~~~ivv~c~~g-~~a~ 128 (161)
.+.+.||||.|..| .|+.
T Consensus 203 ~~~~~PivVHCsaGvGRTG 221 (288)
T 4grz_A 203 LPHAGPIIVHSSAGIGRTG 221 (288)
T ss_dssp STTCCCEEEECSSSSHHHH
T ss_pred cCCCCcEEEEeCCCCcHHH
Confidence 45678999999987 3443
No 373
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=21.35 E-value=1.3e+02 Score=22.01 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=25.9
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
.++.|+|...+|.-...++..|.+.|++ |..+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~ 56 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQV-VIGLD 56 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCE-EEEEe
Confidence 3567888877898888999999999984 66553
No 374
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=21.34 E-value=1.3e+02 Score=23.79 Aligned_cols=42 Identities=10% Similarity=-0.011 Sum_probs=30.3
Q ss_pred HHHHHHhcCC----CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 103 FVEEVSTRFR----KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 103 ~~~~~~~~l~----~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.+...++ ++-+|+++|.+|.-...+-..|+++|++ |..+
T Consensus 163 Yi~~~~~~~~~~~~~~lkivvd~~~Ga~~~~~~~~l~~lG~~-v~~l 208 (481)
T 4hjh_A 163 YADRYAGFLGKGSLNGLRVGVYQHSSVARDLLMYLLTTLGVE-PVAL 208 (481)
T ss_dssp HHHHHHHHHCTTTTTTCEEEEEEETCTTHHHHHHHHHHTTCE-EEEE
T ss_pred HHHHHHHhcCcccccCCEEEEECCCChHHHHHHHHHHHcCCe-EEEe
Confidence 4454444332 3567999999888888888999999995 5444
No 375
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=21.27 E-value=17 Score=26.28 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=33.3
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
...++.....+.++..++++|............|.+.||..+..+.
T Consensus 191 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 191 WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEE
Confidence 3566777777777778888887765666777788889997665544
No 376
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=21.24 E-value=1.2e+02 Score=21.99 Aligned_cols=18 Identities=28% Similarity=0.373 Sum_probs=13.0
Q ss_pred CCCCCeEEEEeCCc-hhHH
Q 031359 111 FRKHDEIIVGCQSG-KRSM 128 (161)
Q Consensus 111 l~~~~~ivv~c~~g-~~a~ 128 (161)
+..+.+|||.|..| .|+.
T Consensus 201 ~~~~~pivVHCsaGvGRTG 219 (284)
T 1fpr_A 201 LPHAGPIIVHSSAGIGRTG 219 (284)
T ss_dssp STTCCCEEEESSBSSHHHH
T ss_pred cCCCCcEEEEcCCCCcHHH
Confidence 34678999999976 4443
No 377
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=21.16 E-value=1.2e+02 Score=23.52 Aligned_cols=30 Identities=30% Similarity=0.308 Sum_probs=23.4
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
..|+|+ +.|.....+|..|.+.|+ +|.+|+
T Consensus 40 ~~v~ii-GaG~aGl~aA~~l~~~g~-~v~v~E 69 (495)
T 2vvm_A 40 WDVIVI-GGGYCGLTATRDLTVAGF-KTLLLE 69 (495)
T ss_dssp EEEEEE-CCBHHHHHHHHHHHHTTC-CEEEEC
T ss_pred CCEEEE-CCcHHHHHHHHHHHHCCC-CEEEEe
Confidence 356665 778888889999999998 587775
No 378
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=21.15 E-value=1e+02 Score=21.66 Aligned_cols=30 Identities=20% Similarity=0.150 Sum_probs=23.8
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+-.++|.++..+..+...|++.|+.++.++
T Consensus 196 ~~ai~~~~d~~a~g~~~al~~~g~~di~vi 225 (293)
T 3l6u_A 196 FDAVYCHNDDIAMGVLEALKKAKISGKIVV 225 (293)
T ss_dssp CSEEEESSHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCEEEECCchHHHHHHHHHHhCCCCCeEEE
Confidence 346778888888889999999999766643
No 379
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=21.10 E-value=2.4e+02 Score=21.02 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=26.1
Q ss_pred cCCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 110 RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 110 ~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
.+...+.++++ ++|..+..++..|.+.|. +|.++.
T Consensus 141 ~~~~~~~v~Vi-GgG~~g~e~A~~l~~~g~-~Vtlv~ 175 (384)
T 2v3a_A 141 AAAGKRRVLLL-GAGLIGCEFANDLSSGGY-QLDVVA 175 (384)
T ss_dssp HHTTCCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred hhccCCeEEEE-CCCHHHHHHHHHHHhCCC-eEEEEe
Confidence 34445677776 777888899999999997 477664
No 380
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=21.05 E-value=1e+02 Score=21.66 Aligned_cols=30 Identities=17% Similarity=0.069 Sum_probs=23.1
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+-.|+|.++..+..+...|++.|++++.++
T Consensus 192 ~~ai~~~~d~~a~g~~~al~~~g~~dv~vi 221 (290)
T 2fn9_A 192 IKAIWCGNDAMALGAMKACEAAGRTDIYIF 221 (290)
T ss_dssp CCEEEESSHHHHHHHHHHHHHTTCTTCEEE
T ss_pred CcEEEECCchHHHHHHHHHHHCCCCCeEEE
Confidence 345668887888888899999998667654
No 381
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=20.90 E-value=1.5e+02 Score=18.13 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=22.7
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCC-CcceeEecccHHH
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAG-FAGITDIAGGFAA 151 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G-~~~v~~l~GG~~~ 151 (161)
...|+++.+...........|...| |. +.....+-.+
T Consensus 20 ~~~ilivdd~~~~~~~l~~~L~~~g~~~-v~~~~~~~~~ 57 (146)
T 4dad_A 20 MINILVASEDASRLAHLARLVGDAGRYR-VTRTVGRAAQ 57 (146)
T ss_dssp GCEEEEECSCHHHHHHHHHHHHHHCSCE-EEEECCCHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHhhCCCeE-EEEeCCHHHH
Confidence 3566776666666666777777777 64 5544444433
No 382
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=20.89 E-value=1.1e+02 Score=19.79 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCccee
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~ 143 (161)
...+......+.++..+++..............|++.|| ++.
T Consensus 114 ~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~~~ 155 (192)
T 1l3i_A 114 QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-DVN 155 (192)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-CCE
T ss_pred HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-ceE
Confidence 456666666666666666665555556677888999998 444
No 383
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=20.83 E-value=1e+02 Score=22.27 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=25.1
Q ss_pred CCCeEEEEeC---CchhHHHHHHHHHHCCCccee
Q 031359 113 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 113 ~~~~ivv~c~---~g~~a~~~~~~L~~~G~~~v~ 143 (161)
+++.|+++.+ +|.....+...|++.|-+.|.
T Consensus 155 ~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~ 188 (250)
T 3ozf_A 155 KGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVA 188 (250)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEE
Confidence 4678888875 788888999999999976655
No 384
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=20.82 E-value=1.3e+02 Score=21.50 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=24.0
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCcceeEecc
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
+++++ +.|..+..++..|.+.|.++|++++-
T Consensus 110 ~vlii-GaGg~a~ai~~~L~~~G~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVV-GAGGAARAVIYALLQMGVKDIWVVNR 140 (253)
T ss_dssp SEEEE-CCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred eEEEE-CcHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 66666 66777778888999999977887654
No 385
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=20.72 E-value=1.6e+02 Score=20.15 Aligned_cols=31 Identities=23% Similarity=0.421 Sum_probs=22.5
Q ss_pred CCeEEEEeCCc----hhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~~g----~~a~~~~~~L~~~G~~~v~~l 145 (161)
..+|++.|-.| .-...++..|+..||+ |.++
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~-v~~L 122 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFT-VYNL 122 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCE-EEEC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCE-EEEC
Confidence 45788888654 3455788899999996 6544
No 386
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.69 E-value=1.5e+02 Score=17.92 Aligned_cols=24 Identities=17% Similarity=0.061 Sum_probs=11.3
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCC
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
.|+++.+...........|...|+
T Consensus 8 ~iLivdd~~~~~~~l~~~L~~~g~ 31 (149)
T 1k66_A 8 PLLVVEDSDEDFSTFQRLLQREGV 31 (149)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTB
T ss_pred cEEEEECCHHHHHHHHHHHHHcCC
Confidence 344444444444444555555554
No 387
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=20.67 E-value=1.9e+02 Score=20.45 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=40.2
Q ss_pred cCHHHHHHHHh---CC-CEEEEcCCh------hhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc----CC--CCC
Q 031359 52 VPVRVAHELLQ---AG-HRYLDVRTP------EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR----FR--KHD 115 (161)
Q Consensus 52 i~~~~~~~~~~---~~-~~liDvR~~------~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~----l~--~~~ 115 (161)
-++.++.+.++ .+ ..|||++.. ..|...+|. -+++|+.+. +..+..+.+...... +. ++.
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi~-y~~~p~~D~---~~~P~~~~l~~~~~~i~~~~~~~~~~ 142 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIK-YIKLQCKGH---GECPTTENTETFIRLCERFNERNPPE 142 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTCE-EEECCCCCT---TCCCCHHHHHHHHHHHTTC-----CE
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCCE-EEEEecCCC---CCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 45666655443 24 579999864 233332221 234554210 112233333333332 22 347
Q ss_pred eEEEEeCCc-hhHH-HHHHHHHH-CCC
Q 031359 116 EIIVGCQSG-KRSM-MAATDLLN-AGF 139 (161)
Q Consensus 116 ~ivv~c~~g-~~a~-~~~~~L~~-~G~ 139 (161)
+|+|.|..| .|+. .++..|.. .|+
T Consensus 143 ~VlVHC~aG~gRTGt~ia~yLm~~~~~ 169 (241)
T 2c46_A 143 LIGVHCTHGFNRTGFLICAFLVEKMDW 169 (241)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHTTCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 899999987 4444 33334433 565
No 388
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=20.67 E-value=1.4e+02 Score=23.77 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=27.3
Q ss_pred CCCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 111 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 111 l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+.+++.++|...+|.-...++..|.+.|+.+|..+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~ 290 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLT 290 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEE
Confidence 45677788887788888888999999998766654
No 389
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=20.62 E-value=1.4e+02 Score=17.41 Aligned_cols=10 Identities=20% Similarity=0.418 Sum_probs=4.4
Q ss_pred eEEEEeCCch
Q 031359 116 EIIVGCQSGK 125 (161)
Q Consensus 116 ~ivv~c~~g~ 125 (161)
.++..|.++.
T Consensus 28 ~vv~~~~~~~ 37 (120)
T 1tmy_A 28 EVAGEATNGR 37 (120)
T ss_dssp EEEEEESSHH
T ss_pred EEEEEECCHH
Confidence 3344445543
No 390
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=20.58 E-value=1.4e+02 Score=21.50 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
+++.++|...+|.-+..++..|.+.|++ |.+++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~ 150 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCG 150 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEE
Confidence 3566777655777777888899999985 77654
No 391
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=20.57 E-value=1.2e+02 Score=18.48 Aligned_cols=11 Identities=27% Similarity=0.516 Sum_probs=4.5
Q ss_pred HHHHHHHHCCC
Q 031359 129 MAATDLLNAGF 139 (161)
Q Consensus 129 ~~~~~L~~~G~ 139 (161)
.....|...||
T Consensus 23 ~l~~~L~~~g~ 33 (147)
T 2zay_A 23 ASISALSQEGF 33 (147)
T ss_dssp HHHHHHHHHTE
T ss_pred HHHHHHHHcCC
Confidence 33334444444
No 392
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=20.51 E-value=1.7e+02 Score=20.88 Aligned_cols=31 Identities=13% Similarity=0.322 Sum_probs=22.6
Q ss_pred CCeEEEEeCCc----hhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~~g----~~a~~~~~~L~~~G~~~v~~l 145 (161)
..+|++.|-.| .-...++..|+..||+ |.+|
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~-Vi~L 157 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYN-VVDL 157 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCE-EEEC
Confidence 46788888765 3455788899999996 5444
No 393
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=20.48 E-value=1.6e+02 Score=17.96 Aligned_cols=23 Identities=9% Similarity=0.005 Sum_probs=9.4
Q ss_pred EEEEeCCchhHHHHHHHHHHCCC
Q 031359 117 IIVGCQSGKRSMMAATDLLNAGF 139 (161)
Q Consensus 117 ivv~c~~g~~a~~~~~~L~~~G~ 139 (161)
|+++.+...........|...|+
T Consensus 8 ILivdd~~~~~~~l~~~L~~~~~ 30 (144)
T 3kht_A 8 VLVVEDNPDDIALIRRVLDRKDI 30 (144)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCHHHHHHHHHHHHhcCC
Confidence 33333333333344444444444
No 394
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.39 E-value=1.5e+02 Score=20.43 Aligned_cols=26 Identities=12% Similarity=0.228 Sum_probs=16.1
Q ss_pred CeEEEEeCCc-------hhHHHHHHHHHHCCCc
Q 031359 115 DEIIVGCQSG-------KRSMMAATDLLNAGFA 140 (161)
Q Consensus 115 ~~ivv~c~~g-------~~a~~~~~~L~~~G~~ 140 (161)
..|-|||.+. ..+..++..|.+.|+.
T Consensus 14 ~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~ 46 (189)
T 3sbx_A 14 WTVAVYCAAAPTHPELLELAGAVGAAIAARGWT 46 (189)
T ss_dssp CEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCE
Confidence 4677788643 2345566677777764
No 395
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=20.39 E-value=1.4e+02 Score=22.33 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=25.5
Q ss_pred CCCCeEEEEeCCchhHHHHHHHHHHCCCcceeEeccc
Q 031359 112 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 148 (161)
Q Consensus 112 ~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 148 (161)
.+++.||+-+.+|+.+.-+|...+.+|++-+-++..+
T Consensus 69 ~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~ 105 (334)
T 3tbh_A 69 IPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPES 105 (334)
T ss_dssp CTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 4456655666788988888888888898644345443
No 396
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=20.37 E-value=1.3e+02 Score=23.53 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=23.4
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
.+.|+|+ ++|.-...+|..|.+.|++ |.+++
T Consensus 122 ~~~V~II-GgGpAGl~aA~~L~~~G~~-V~v~e 152 (456)
T 2vdc_G 122 GLSVGVI-GAGPAGLAAAEELRAKGYE-VHVYD 152 (456)
T ss_dssp CCCEEEE-CCSHHHHHHHHHHHHHTCC-EEEEC
T ss_pred CCEEEEE-CCCHHHHHHHHHHHHCCCe-EEEEe
Confidence 3557666 7777777889999999985 77664
No 397
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=20.19 E-value=1.5e+02 Score=20.68 Aligned_cols=31 Identities=13% Similarity=0.066 Sum_probs=22.1
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++.++|...+|.-...++..|.+.|+ +|..+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~-~V~~~ 46 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGA-KVVIA 46 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEE
Confidence 45677776677777788888888887 46554
No 398
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.16 E-value=1.5e+02 Score=20.95 Aligned_cols=31 Identities=3% Similarity=-0.017 Sum_probs=20.2
Q ss_pred CCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 114 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 114 ~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
++.++|...+|.-...++..|.+.|++ |..+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~-V~~~ 61 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSK-LVLW 61 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 455666656666666777777777864 5544
No 399
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=20.11 E-value=1.4e+02 Score=24.42 Aligned_cols=34 Identities=6% Similarity=-0.120 Sum_probs=25.8
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCC----CcceeEecc
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAG----FAGITDIAG 147 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G----~~~v~~l~G 147 (161)
++..+||+|++-..+..++..|...| + ++..+.|
T Consensus 397 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~-~~~~l~G 434 (696)
T 2ykg_A 397 PETITILFVKTRALVDALKNWIEGNPKLSFL-KPGILTG 434 (696)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHCTTCCSC-CEEC---
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCcccc-ceeEEEc
Confidence 45679999999989999999999998 5 3555644
No 400
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=20.07 E-value=1.7e+02 Score=19.80 Aligned_cols=43 Identities=9% Similarity=0.017 Sum_probs=32.1
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCchhHHHHHHHHHHCCCccee
Q 031359 101 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT 143 (161)
Q Consensus 101 ~~~~~~~~~~l~~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~ 143 (161)
..++......+.++-.+++.+........+...+...|+..+.
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTY 175 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 4677777777888888888877766666777788888986544
No 401
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=20.04 E-value=1.4e+02 Score=17.42 Aligned_cols=31 Identities=26% Similarity=0.071 Sum_probs=19.5
Q ss_pred CeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 115 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 115 ~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
..|+++.. |.-...++..|...|..+|..++
T Consensus 6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~ 36 (118)
T 3ic5_A 6 WNICVVGA-GKIGQMIAALLKTSSNYSVTVAD 36 (118)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSSEEEEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCceEEEEe
Confidence 34555544 77777777788888832466554
No 402
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=20.03 E-value=1.1e+02 Score=21.80 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=25.4
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEec
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 146 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l~ 146 (161)
++++++++ .+|..+..+|..|.++|. +|.++.
T Consensus 151 ~~~~vvVi-GgG~ig~e~A~~l~~~G~-~Vt~v~ 182 (314)
T 4a5l_A 151 RNKVLMVV-GGGDAAMEEALHLTKYGS-KVIILH 182 (314)
T ss_dssp TTSEEEEE-CSSHHHHHHHHHHTTTSS-EEEEEC
T ss_pred CCCeEEEE-CCChHHHHHHHHHHHhCC-eeeeec
Confidence 45677776 678889999999999996 587765
No 403
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=20.03 E-value=1.7e+02 Score=18.26 Aligned_cols=25 Identities=12% Similarity=0.093 Sum_probs=13.0
Q ss_pred eEEEEeCCchhHHHHHHHHHHCCCc
Q 031359 116 EIIVGCQSGKRSMMAATDLLNAGFA 140 (161)
Q Consensus 116 ~ivv~c~~g~~a~~~~~~L~~~G~~ 140 (161)
.|+++.+...........|...||.
T Consensus 38 ~Ilivdd~~~~~~~l~~~L~~~g~~ 62 (157)
T 3hzh_A 38 NVLIVDDSVFTVKQLTQIFTSEGFN 62 (157)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCCe
Confidence 3555544444444555555666653
No 404
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=20.02 E-value=1.3e+02 Score=16.69 Aligned_cols=26 Identities=15% Similarity=0.005 Sum_probs=14.1
Q ss_pred CCchhHHHHHHHHHHCCCcceeEecc
Q 031359 122 QSGKRSMMAATDLLNAGFAGITDIAG 147 (161)
Q Consensus 122 ~~g~~a~~~~~~L~~~G~~~v~~l~G 147 (161)
.....-..++..+.+.++..+-+.++
T Consensus 6 ~p~~tv~ea~~~M~~~~i~~~~V~d~ 31 (70)
T 3ghd_A 6 QPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp CTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 33344445666666666655555544
No 405
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=20.02 E-value=1.4e+02 Score=21.44 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=23.0
Q ss_pred CCCeEEEEeCCchhHHHHHHHHHHCCCcceeEe
Q 031359 113 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 145 (161)
Q Consensus 113 ~~~~ivv~c~~g~~a~~~~~~L~~~G~~~v~~l 145 (161)
+++.|+|...+|.-...++..|.+.|++ |..+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~ 41 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYK-VRGT 41 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE-EEEE
Confidence 4566777767787777888888888874 6644
Done!