AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>031361
MRRSLIFLLLLTVILSSLPPTSPRASPESGDLALVATLNGTVHLVDTKRGESRWSFSMGK
PIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKKPSIDVGEFMRRMPHVWDDGALLLGH
EKTSVFFVDAKSGGMICSHESDNSASTLGSGLPMKKSFVFM
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with IRE1A IRE1A IRE1A	protein from Arabidopsis thaliana	2.6e-05
BLAST match view associations BLAST with ern2 ern2 ern2 endoplasmic reticulum to nucleus signaling 2	gene_product from Danio rerio	8.2e-05
BLAST match view associations BLAST with ERN2 ERN2 ERN2 Uncharacterized protein	protein from Canis lupus familiaris	0.00021
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031361
        (161 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2053928 - symbol:IRE1A species:3702 "Arabidops...   111  2.6e-05   1
ZFIN|ZDB-GENE-090312-15 - symbol:ern2 "endoplasmic reticu...   107  8.2e-05   1
UNIPROTKB|F1PHS1 - symbol:ERN2 "Uncharacterized protein" ...   103  0.00021   1


>TAIR|locus:2053928 [details] [associations]
            symbol:IRE1A species:3702 "Arabidopsis thaliana"
            [GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
            "protein serine/threonine kinase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006468 "protein phosphorylation"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016301
            "kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
            transferring phosphorus-containing groups" evidence=IEA]
            [GO:0016891 "endoribonuclease activity, producing
            5'-phosphomonoesters" evidence=IEA] [GO:0004521 "endoribonuclease
            activity" evidence=IMP] [GO:0006987 "activation of signaling
            protein activity involved in unfolded protein response"
            evidence=IMP] [GO:0042406 "extrinsic to endoplasmic reticulum
            membrane" evidence=IDA] [GO:0030968 "endoplasmic reticulum unfolded
            protein response" evidence=IGI] [GO:0006487 "protein N-linked
            glycosylation" evidence=RCA] InterPro:IPR000719 InterPro:IPR006567
            InterPro:IPR008271 InterPro:IPR010513 InterPro:IPR011009
            Pfam:PF00069 Pfam:PF06479 PROSITE:PS00108 PROSITE:PS50011
            PROSITE:PS51392 SMART:SM00580 GO:GO:0005524 EMBL:CP002685
            GO:GO:0006987 SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0006397
            GO:GO:0004521 GO:GO:0042406 EMBL:AC007584 GO:GO:0016891
            EMBL:AF308596 EMBL:AB049937 IPI:IPI00526423 PIR:B84553
            RefSeq:NP_565419.1 UniGene:At.14585 ProteinModelPortal:Q9C5S2
            SMR:Q9C5S2 STRING:Q9C5S2 PRIDE:Q9C5S2 EnsemblPlants:AT2G17520.1
            GeneID:816258 KEGG:ath:AT2G17520 TAIR:At2g17520 InParanoid:Q9C5S2
            OMA:HIIVEYL PhylomeDB:Q9C5S2 ProtClustDB:CLSN2914938
            ArrayExpress:Q9C5S2 Genevestigator:Q9C5S2 Uniprot:Q9C5S2
        Length = 841

 Score = 111 (44.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 37/125 (29%), Positives = 58/125 (46%)

Query:    24 RASPESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKL 83
             R  P   +  LV   +G V L    +    WSFS G P++S +     +   +  E  + 
Sbjct:    52 REPPTEPNTKLVVDRDGKVFLKQQPKETPYWSFSTGSPMHSLYQAPANNNTENATEITRP 111

Query:    84 YFHRKGIGKMKKPS-ID------VGEFMRRMPHVWDDGALLLGHEKTSVFFVDAKSGGMI 136
             +   + +   K  + +D      V EF R+ P V DDG + LG E TS + VD +SG +I
Sbjct:   112 HIIVEYLNNSKAATTVDGYHNWTVQEFFRQKPLVTDDG-VTLGSETTSAYLVDGRSGRLI 170

Query:   137 CSHES 141
               ++S
Sbjct:   171 HVYKS 175


>ZFIN|ZDB-GENE-090312-15 [details] [associations]
            symbol:ern2 "endoplasmic reticulum to nucleus
            signaling 2" species:7955 "Danio rerio" [GO:0016772 "transferase
            activity, transferring phosphorus-containing groups" evidence=IEA]
            [GO:0004674 "protein serine/threonine kinase activity"
            evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
            [GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004672 "protein kinase activity"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR000719 InterPro:IPR006567 InterPro:IPR008271
            InterPro:IPR010513 InterPro:IPR011009 Pfam:PF00069 Pfam:PF06479
            PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51392 SMART:SM00580
            ZFIN:ZDB-GENE-090312-15 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
            GO:GO:0006397 InterPro:IPR018391 InterPro:IPR011047 SMART:SM00564
            SUPFAM:SSF50998 GO:GO:0016891 GeneTree:ENSGT00390000015684
            EMBL:BX004779 IPI:IPI00496992 Ensembl:ENSDART00000081355
            Bgee:F1R365 Uniprot:F1R365
        Length = 950

 Score = 107 (42.7 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 36/122 (29%), Positives = 57/122 (46%)

Query:    27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYF- 85
             PES  L  V+TL+G++H V  + G+ +W+      I       +P F  D   D  LY  
Sbjct:    26 PES--LLFVSTLDGSLHAVSKQTGDIKWTLKEDPIIQVPEYFQEPGFLPDPN-DGSLYVL 82

Query:    86 -HRKGIGKMKKPSIDVGEFMRRMPHVWDDGALLLGHEKTSVFFVDAKSGGMICSHESDNS 144
               ++  G MK P   + E ++  P    DG L  G ++ + F VD ++G    S  + +S
Sbjct:    83 GGKRKEGLMKLP-FTIQELVQSSPCRSSDGVLYTGKKQDTWFVVDPQTGEKQTSLSTSSS 141

Query:   145 AS 146
              S
Sbjct:   142 DS 143


>UNIPROTKB|F1PHS1 [details] [associations]
            symbol:ERN2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674 "protein
            serine/threonine kinase activity" evidence=IEA] [GO:0004540
            "ribonuclease activity" evidence=IEA] InterPro:IPR000719
            InterPro:IPR006567 InterPro:IPR008271 InterPro:IPR010513
            InterPro:IPR011009 Pfam:PF00069 Pfam:PF06479 PROSITE:PS00108
            PROSITE:PS50011 PROSITE:PS51392 SMART:SM00580 GO:GO:0005524
            SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0006397 InterPro:IPR018391
            InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998 GO:GO:0016891
            GeneTree:ENSGT00390000015684 OMA:MLRVHPT EMBL:AAEX03004448
            Ensembl:ENSCAFT00000027982 Uniprot:F1PHS1
        Length = 930

 Score = 103 (41.3 bits), Expect = 0.00021, P = 0.00021
 Identities = 33/109 (30%), Positives = 51/109 (46%)

Query:    27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYF- 85
             PES  L LV+TL+G++H ++ + G+ +W+      I       +  F  D   D  LY  
Sbjct:    38 PES--LLLVSTLDGSLHALNKQTGDLKWTLKDDPIIQGPMYVTETAFLSDPA-DGSLYVL 94

Query:    86 -HRKGIGKMKKPSIDVGEFMRRMPHVWDDGALLLGHEKTSVFFVDAKSG 133
               +K  G MK P   + E +   P    DG    G ++ + F VD +SG
Sbjct:    95 GTQKQQGLMKLP-FTIPELVHASPCRSSDGVFYTGRKQDAWFVVDPESG 142


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      161       141   0.00091  102 3  11 22  0.44    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  152 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.09u 0.08s 14.17t   Elapsed:  00:00:02
  Total cpu time:  14.09u 0.08s 14.17t   Elapsed:  00:00:02
  Start:  Fri May 10 23:01:19 2013   End:  Fri May 10 23:01:21 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
