Query 031365
Match_columns 161
No_of_seqs 225 out of 1500
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 21:00:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031365.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031365hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 9.7E-36 3.3E-40 219.0 10.1 145 1-161 1-151 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 1.7E-30 5.7E-35 192.8 12.1 104 54-160 57-161 (161)
3 3gla_A Low molecular weight he 100.0 1.5E-29 5.3E-34 173.6 14.1 98 51-149 2-99 (100)
4 4fei_A Heat shock protein-rela 100.0 5E-28 1.7E-32 166.9 11.7 96 50-151 3-98 (102)
5 3aab_A Putative uncharacterize 99.9 9.7E-27 3.3E-31 165.3 10.4 95 51-150 22-118 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 1.1E-25 3.9E-30 156.1 14.1 99 54-160 3-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.6E-25 5.6E-30 154.0 11.9 97 55-159 3-100 (101)
8 2klr_A Alpha-crystallin B chai 99.9 3E-25 1E-29 166.5 11.3 97 55-160 65-162 (175)
9 3q9p_A Heat shock protein beta 99.9 6.8E-24 2.3E-28 141.6 10.9 83 58-148 2-85 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 3.8E-23 1.3E-27 139.3 11.9 86 59-152 2-88 (90)
11 2bol_A TSP36, small heat shock 99.9 5E-22 1.7E-26 160.9 10.3 91 52-151 97-192 (314)
12 2bol_A TSP36, small heat shock 99.8 3.9E-21 1.3E-25 155.7 8.8 89 54-147 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.1 2.3E-10 7.9E-15 79.4 8.3 81 53-149 9-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.1 2E-10 6.9E-15 76.5 7.6 81 53-149 2-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.6 1.2E-07 4.2E-12 67.4 7.2 77 53-150 3-84 (134)
16 3eud_A Protein SHQ1; CS domain 98.6 1E-06 3.5E-11 60.8 11.2 80 51-151 15-99 (115)
17 3igf_A ALL4481 protein; two-do 98.4 1.3E-06 4.4E-11 72.2 9.0 71 54-147 298-369 (374)
18 1x5m_A Calcyclin-binding prote 98.1 6.5E-05 2.2E-09 52.7 10.9 82 52-149 19-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.0 4.4E-05 1.5E-09 54.3 9.1 92 51-149 17-112 (134)
20 1wgv_A KIAA1068 protein; CS do 98.0 0.00013 4.5E-09 50.9 11.0 85 49-149 15-102 (124)
21 3qor_A Nuclear migration prote 97.9 0.00011 3.7E-09 51.2 9.9 85 46-149 9-97 (121)
22 1ejf_A Progesterone receptor P 97.8 9.9E-05 3.4E-09 51.6 8.0 79 54-149 4-82 (125)
23 1wfi_A Nuclear distribution ge 97.8 0.00023 8E-09 50.1 9.9 80 51-149 5-88 (131)
24 2o30_A Nuclear movement protei 97.6 0.00039 1.4E-08 48.9 9.1 76 53-148 4-80 (131)
25 2rh0_A NUDC domain-containing 97.6 0.00087 3E-08 48.7 10.5 79 51-149 11-91 (157)
26 2kmw_A Uncharacterized protein 97.5 0.00021 7.2E-09 51.7 6.4 78 53-149 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.4 8.5E-05 2.9E-09 52.7 3.2 85 53-149 6-98 (134)
28 3q9p_A Heat shock protein beta 83.7 2.5 8.5E-05 26.7 5.2 33 115-148 8-40 (85)
29 4fei_A Heat shock protein-rela 83.1 5 0.00017 26.1 6.7 33 65-98 63-96 (102)
30 2y1y_A Alpha-crystallin B chai 77.0 4 0.00014 26.0 4.5 33 115-148 7-39 (90)
31 3gla_A Low molecular weight he 74.8 6.7 0.00023 25.2 5.2 32 64-96 65-97 (100)
32 2wj5_A Heat shock protein beta 74.3 5 0.00017 26.2 4.5 32 116-148 13-44 (101)
33 4eld_A MJ16.5-P1, small heat s 74.1 11 0.00038 26.5 6.6 33 116-149 68-100 (161)
34 3l1e_A Alpha-crystallin A chai 73.1 6.4 0.00022 25.9 4.8 32 115-147 13-44 (106)
35 2nwt_A UPF0165 protein AF_2212 73.1 5.9 0.0002 24.5 4.2 31 129-160 3-33 (69)
36 3aab_A Putative uncharacterize 70.9 11 0.00036 25.3 5.7 33 116-149 36-69 (123)
37 1gme_A Heat shock protein 16.9 66.0 17 0.00057 25.4 6.0 33 116-149 55-88 (151)
38 2klr_A Alpha-crystallin B chai 57.3 13 0.00045 26.8 4.2 32 116-148 75-106 (175)
39 1nkw_E 50S ribosomal protein L 49.1 46 0.0016 24.9 6.1 46 76-147 39-84 (212)
40 2cql_A OK/SW-CL.103, 60S ribos 48.3 27 0.00093 22.8 4.3 19 76-95 20-38 (100)
41 1rl6_A Protein (ribosomal prot 43.6 56 0.0019 23.6 5.8 46 76-147 11-56 (177)
42 1ew4_A CYAY protein; friedreic 43.6 13 0.00045 24.6 2.2 17 130-146 29-45 (106)
43 2o30_A Nuclear movement protei 42.1 38 0.0013 22.9 4.4 30 115-144 15-44 (131)
44 1n91_A ORF, hypothetical prote 42.0 57 0.0019 21.7 5.1 37 58-96 8-45 (108)
45 3oeq_A Frataxin homolog, mitoc 41.7 21 0.00072 24.4 3.0 16 131-146 49-64 (123)
46 3j21_F 50S ribosomal protein L 39.2 47 0.0016 24.2 4.8 43 77-144 15-57 (184)
47 1vq8_E 50S ribosomal protein L 37.7 60 0.0021 23.5 5.1 47 76-147 9-55 (178)
48 3qqz_A Putative uncharacterize 35.6 1.4E+02 0.0048 22.4 7.3 65 70-143 21-86 (255)
49 4awd_A Beta-porphyranase; hydr 34.5 88 0.003 24.7 6.0 48 75-125 85-145 (324)
50 3v2d_H 50S ribosomal protein L 33.1 81 0.0028 22.8 5.2 43 76-144 12-54 (180)
51 3iln_A Laminarinase; jelly ROW 32.0 65 0.0022 24.1 4.7 44 81-125 49-97 (251)
52 1wgv_A KIAA1068 protein; CS do 31.4 61 0.0021 21.5 4.1 31 115-145 30-61 (124)
53 3t3l_A Frataxin, mitochondrial 29.9 38 0.0013 23.3 2.8 17 129-145 40-56 (129)
54 2rh0_A NUDC domain-containing 29.0 66 0.0023 22.5 4.1 31 115-145 24-54 (157)
55 3iz5_F 60S ribosomal protein L 28.8 1.5E+02 0.005 21.6 6.0 46 76-146 13-60 (190)
56 2ks0_A Uncharacterized protein 28.6 35 0.0012 21.0 2.2 22 73-95 17-38 (71)
57 1q5l_A Chaperone protein DNAK; 27.3 1.2E+02 0.0041 20.4 5.1 30 129-160 98-130 (135)
58 3qor_A Nuclear migration prote 26.2 88 0.003 20.7 4.1 31 115-145 27-59 (121)
59 2kgs_A Uncharacterized protein 25.0 52 0.0018 22.3 2.8 26 71-97 2-27 (132)
60 1wfi_A Nuclear distribution ge 24.4 1E+02 0.0035 20.5 4.3 30 116-145 19-50 (131)
61 3u5e_H L8, RP24, YL11, 60S rib 24.2 1.6E+02 0.0054 21.4 5.4 46 76-146 13-59 (191)
62 2hyk_A Beta-1,3-glucanase; fam 24.1 60 0.0021 24.1 3.2 14 112-125 86-99 (245)
63 2uwa_A Cellulase; glycoside hy 23.1 1.5E+02 0.005 22.7 5.3 43 75-125 31-74 (274)
64 2gjh_A Designed protein; oblig 22.9 80 0.0027 18.0 2.8 21 75-96 31-51 (62)
65 3cdw_H Protein 3B, VPG; RNA-de 21.8 44 0.0015 16.4 1.3 18 144-161 6-23 (26)
66 3jx8_A Putative lipoprotein; s 20.6 1.1E+02 0.0039 22.6 4.2 40 55-95 33-72 (250)
67 1nvp_C Transcription initiatio 20.4 41 0.0014 21.0 1.3 15 128-142 46-60 (76)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=100.00 E-value=9.7e-36 Score=218.98 Aligned_cols=145 Identities=68% Similarity=1.093 Sum_probs=122.6
Q ss_pred CccccccCCCCCCCCCCCCCCCCC-CcCCCC-----CCCCCCCCCCCCCCCCCCccccCceeeEEECCCeEEEEEEcCCC
Q 031365 1 MSLIPSFFGNRRSSVSNPFSLDVW-DPFRDF-----PFPSGYSPALSSQFPPETSAIVNARVDWKETPEAHVFKADLPGL 74 (161)
Q Consensus 1 m~l~p~~f~~~~~~~~~pf~~~~~-d~f~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~dv~e~~d~~~i~~~lPG~ 74 (161)
||+++. .+.|+||+ ++| |||..| ++... .+.....+.|++||+|++++|+|.++|||+
T Consensus 1 ms~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~p~~di~e~~d~~~v~~dlPGv 64 (151)
T 1gme_A 1 MSIVRR------SNVFDPFA-DLWADPFDTFRSIVPAISGG---------GSETAAFANARMDWKETPEAHVFKADLPGV 64 (151)
T ss_dssp -CCCCS------CCCBCTTC-GGGSSHHHHHHHHGGGTTSS---------CCSHHHHGGGCEEEEECSSEEEEEEECTTC
T ss_pred Cccccc------ccccCchH-hhhhchhhhhhhhccccccc---------ccccccccCCceEEEEcCCEEEEEEECCCC
Confidence 787733 58899998 888 877543 11111 134456678999999999999999999999
Q ss_pred CCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEeCCEEEEEEeCcCCCCCCe
Q 031365 75 RKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPKVEVTKPDV 154 (161)
Q Consensus 75 ~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~~~~~~~~ 154 (161)
+++||+|++++++.|+|+|+++.+.+.++.+|+++|+.+|+|.|+|.||.+||.++|+|+|+||+|+|++||....+++.
T Consensus 65 ~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~~~~~~ 144 (151)
T 1gme_A 65 KKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEV 144 (151)
T ss_dssp CGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCCCTTCC
T ss_pred ChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccCcCCCCC
Confidence 99999999964459999999988766677899999999999999999999999999999999999999999998877777
Q ss_pred eEEeccC
Q 031365 155 KAIAISG 161 (161)
Q Consensus 155 ~~I~I~~ 161 (161)
++|+|+|
T Consensus 145 ~~I~I~~ 151 (151)
T 1gme_A 145 KAIQISG 151 (151)
T ss_dssp CCCCCCC
T ss_pred eEeeeCC
Confidence 8999987
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.97 E-value=1.7e-30 Score=192.79 Aligned_cols=104 Identities=28% Similarity=0.355 Sum_probs=95.4
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEee-eeeEEEEEEECCCCCccCCeE
Q 031365 54 ARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVER-SSGMFSRRFRLPENVKMDQIK 132 (161)
Q Consensus 54 p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~-~~g~f~r~~~LP~~vd~~~i~ 132 (161)
+++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++.+...++.+|+++|+ .+|.|.|+|.||.+||.++|+
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence 449999999999999999999999999999985 999999998766666778999999 999999999999999999999
Q ss_pred EEEeCCEEEEEEeCcCCCCCCeeEEecc
Q 031365 133 ASMESGVLTVTVPKVEVTKPDVKAIAIS 160 (161)
Q Consensus 133 A~~~nGvL~I~~pK~~~~~~~~~~I~I~ 160 (161)
|+|+||||+|++||.+..+ +++|+|+
T Consensus 136 A~~~nGvL~I~lpK~~~~~--~r~I~Ie 161 (161)
T 4eld_A 136 AKFENGVLSVILPKAESSI--KKGINIE 161 (161)
T ss_dssp EEEETTEEEEEEEBCGGGS--CCCCCCC
T ss_pred EEEECCEEEEEEEcCCCCC--CcEeecC
Confidence 9999999999999987765 4788885
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.97 E-value=1.5e-29 Score=173.57 Aligned_cols=98 Identities=37% Similarity=0.638 Sum_probs=91.4
Q ss_pred ccCceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCC
Q 031365 51 IVNARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 130 (161)
Q Consensus 51 ~~~p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 130 (161)
.|.|++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++.+...++.+|+++|+.+|+|.|+|.||.+||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 467999999999999999999999999999999985 9999999988777777899999999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeCcCC
Q 031365 131 IKASMESGVLTVTVPKVEV 149 (161)
Q Consensus 131 i~A~~~nGvL~I~~pK~~~ 149 (161)
|+|+|+||+|+|++||.++
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999864
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=5e-28 Score=166.85 Aligned_cols=96 Identities=29% Similarity=0.438 Sum_probs=88.5
Q ss_pred cccCceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccC
Q 031365 50 AIVNARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMD 129 (161)
Q Consensus 50 ~~~~p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 129 (161)
+.+.|++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++. +.+|+++|+.+|+|.|+|.||.+||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~ 76 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPA 76 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTT
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchh
Confidence 4577999999999999999999999999999999985 9999999853 367889999999999999999999999
Q ss_pred CeEEEEeCCEEEEEEeCcCCCC
Q 031365 130 QIKASMESGVLTVTVPKVEVTK 151 (161)
Q Consensus 130 ~i~A~~~nGvL~I~~pK~~~~~ 151 (161)
+|+|+|+||+|+|++||.++..
T Consensus 77 ~i~A~~~~GvL~I~lpK~~~~~ 98 (102)
T 4fei_A 77 SGVASLAGGVLTVRFEKLRPTI 98 (102)
T ss_dssp CCEEEEETTEEEEEEEBSSCCC
T ss_pred HcEEEEECCEEEEEEEccCccc
Confidence 9999999999999999987643
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=9.7e-27 Score=165.35 Aligned_cols=95 Identities=32% Similarity=0.425 Sum_probs=87.9
Q ss_pred ccCceeeEEECCCeEEEEEEcCCCCCCCeEEEEeC-CeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccC
Q 031365 51 IVNARVDWKETPEAHVFKADLPGLRKEEVKVEVED-DRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMD 129 (161)
Q Consensus 51 ~~~p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 129 (161)
.+.|++||+|++++|+|.++|||++++||+|++++ + .|+|+|+++.+. +.+|+++|+.+ +|.|+|.||.+||.+
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~ 96 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKD 96 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTT
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcc
Confidence 35599999999999999999999999999999998 6 999999987643 57899999999 999999999999999
Q ss_pred Ce-EEEEeCCEEEEEEeCcCCC
Q 031365 130 QI-KASMESGVLTVTVPKVEVT 150 (161)
Q Consensus 130 ~i-~A~~~nGvL~I~~pK~~~~ 150 (161)
+| +|+|+||+|+|++||.+..
T Consensus 97 ~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 97 AEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp CCCEEEEETTEEEEEEEGGGEE
T ss_pred hhCeeEEcCCEEEEEEEcCCCC
Confidence 99 9999999999999998754
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.94 E-value=1.1e-25 Score=156.08 Aligned_cols=99 Identities=25% Similarity=0.461 Sum_probs=86.0
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEE
Q 031365 54 ARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKA 133 (161)
Q Consensus 54 p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A 133 (161)
...+|+|++++|+|.++|||++++||+|+++++ .|+|+|+++... ++..|+++ .|.|+|.||.+||.++|+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~--~~~~~~~~-----eF~R~~~LP~~vd~~~i~A 74 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQ--DDHGYISR-----EFHRRYRLPSNVDQSALSC 74 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEE--TTTEEEEE-----EEEEEEECCTTBCTTSCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccc--CCCCEEEE-----EEEEEEECCCCcChhHcEE
Confidence 457999999999999999999999999999985 999999986543 23456654 3999999999999999999
Q ss_pred EE-eCCEEEEEEeCcCCCC---CCeeEEecc
Q 031365 134 SM-ESGVLTVTVPKVEVTK---PDVKAIAIS 160 (161)
Q Consensus 134 ~~-~nGvL~I~~pK~~~~~---~~~~~I~I~ 160 (161)
+| +||+|+|++||.++.. .++++|+|+
T Consensus 75 ~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 75 SLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 99 8999999999998763 467889885
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=1.6e-25 Score=154.03 Aligned_cols=97 Identities=20% Similarity=0.312 Sum_probs=82.9
Q ss_pred eeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEE
Q 031365 55 RVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKAS 134 (161)
Q Consensus 55 ~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~ 134 (161)
.+||+|++++|+|.++|||++++||+|+++++ .|+|+|+++... ++..|+++| |.|+|.||.+||.++|+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence 47999999999999999999999999999985 999999987543 345666655 9999999999999999999
Q ss_pred E-eCCEEEEEEeCcCCCCCCeeEEec
Q 031365 135 M-ESGVLTVTVPKVEVTKPDVKAIAI 159 (161)
Q Consensus 135 ~-~nGvL~I~~pK~~~~~~~~~~I~I 159 (161)
| +||+|+|++||....++++..|.+
T Consensus 75 ~s~nGvL~I~lPK~~~~~~~~~~i~~ 100 (101)
T 2wj5_A 75 LSPEGVLSIQATPASAQASLPSPPAA 100 (101)
T ss_dssp ECTTSEEEEEECBCCCCCSSCC----
T ss_pred ECCCCEEEEEEECCCcCCCCCCcccc
Confidence 9 899999999999887776666643
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.92 E-value=3e-25 Score=166.48 Aligned_cols=97 Identities=27% Similarity=0.470 Sum_probs=73.6
Q ss_pred eeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEE
Q 031365 55 RVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKAS 134 (161)
Q Consensus 55 ~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~ 134 (161)
.+||+|++++|+|.++|||++++||+|+++++ .|+|+|+++.+. ++..|+++| |.|+|.||.+||.++|+|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~--~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~ 136 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSS 136 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEE--ETTEEEEEE-----EEEEEECTTTCCTTTCEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccc--cCCceEEEE-----EEEEEECCCCcChhHeEEE
Confidence 47999999999999999999999999999985 999999987653 235666654 9999999999999999999
Q ss_pred E-eCCEEEEEEeCcCCCCCCeeEEecc
Q 031365 135 M-ESGVLTVTVPKVEVTKPDVKAIAIS 160 (161)
Q Consensus 135 ~-~nGvL~I~~pK~~~~~~~~~~I~I~ 160 (161)
| +||||+|++||.+..+ ..++|+|+
T Consensus 137 ~s~dGvL~I~lPK~~~~~-~~r~I~I~ 162 (175)
T 2klr_A 137 LSSDGVLTVNGPRKQVSG-PERTIPIT 162 (175)
T ss_dssp ECTTSCEEEEEECC-------------
T ss_pred EcCCCEEEEEEECCCCCC-CCeEEEEe
Confidence 9 7999999999987543 34788875
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.91 E-value=6.8e-24 Score=141.60 Aligned_cols=83 Identities=25% Similarity=0.456 Sum_probs=69.8
Q ss_pred EEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEe-
Q 031365 58 WKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASME- 136 (161)
Q Consensus 58 v~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~- 136 (161)
+.|++++|+|.++|||++++||+|+++++ .|+|+|+++..... . +..+|+|.|+|.||.+||+++|+|+|.
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~--~-----~~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDE--H-----GYISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCC--C-----CEEEEEEEEEEECCCCcChHHcEEEECC
Confidence 46899999999999999999999999985 99999998764322 1 224678999999999999999999998
Q ss_pred CCEEEEEEeCcC
Q 031365 137 SGVLTVTVPKVE 148 (161)
Q Consensus 137 nGvL~I~~pK~~ 148 (161)
||+|+|++||.+
T Consensus 74 ~GvL~I~lPK~k 85 (85)
T 3q9p_A 74 EGTLTVEAPMPK 85 (85)
T ss_dssp TSEEEEEEECCC
T ss_pred CCEEEEEEEcCC
Confidence 999999999963
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.90 E-value=3.8e-23 Score=139.29 Aligned_cols=86 Identities=30% Similarity=0.521 Sum_probs=69.9
Q ss_pred EECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEE-eC
Q 031365 59 KETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASM-ES 137 (161)
Q Consensus 59 ~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~-~n 137 (161)
.+++++|+|.++|||++++||+|+++++ .|+|+|+++... ++..|+++| |.|+|.||.+||.++|+|+| +|
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~--~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~~~~ 73 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSSMSSD 73 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEE--CSSSEEEEE-----EEEEEECCTTBCGGGCEEEECTT
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHcEEEECCC
Confidence 3678999999999999999999999985 999999987653 345677654 99999999999999999999 89
Q ss_pred CEEEEEEeCcCCCCC
Q 031365 138 GVLTVTVPKVEVTKP 152 (161)
Q Consensus 138 GvL~I~~pK~~~~~~ 152 (161)
|+|+|++||....++
T Consensus 74 GvL~I~~pK~~~~~p 88 (90)
T 2y1y_A 74 GVLTVNGPRKQVSGP 88 (90)
T ss_dssp SEEEEEECBC-----
T ss_pred CEEEEEEEcCCCCCC
Confidence 999999999877654
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.87 E-value=5e-22 Score=160.94 Aligned_cols=91 Identities=19% Similarity=0.296 Sum_probs=82.0
Q ss_pred cCceeeEEECCC----eEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCc
Q 031365 52 VNARVDWKETPE----AHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVK 127 (161)
Q Consensus 52 ~~p~~dv~e~~d----~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 127 (161)
+.|++||+|+++ +|+|.++|||++++||+|+++++ .|+|+|+++.+.+ + ++.+|.|.|+|.||.+||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e--~------~r~~g~F~R~~~LP~~Vd 167 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACG--D------AAMSESVGRSIPLPPSVD 167 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTT--C------CCBCCCEEEEEECCTTBC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCC--C------CEEEEEEEEEEECCCCcc
Confidence 679999999999 99999999999999999999985 9999999875432 1 277899999999999999
Q ss_pred cCCeEEEEe-CCEEEEEEeCcCCCC
Q 031365 128 MDQIKASME-SGVLTVTVPKVEVTK 151 (161)
Q Consensus 128 ~~~i~A~~~-nGvL~I~~pK~~~~~ 151 (161)
.++|+|+|+ ||||+|++||.++..
T Consensus 168 ~e~i~A~~~~nGVL~I~lPK~~~~~ 192 (314)
T 2bol_A 168 RNHIQATITTDDVLVIEAPVNEPNY 192 (314)
T ss_dssp GGGCEEEECSSSEEEEEEEBSSCCT
T ss_pred ccccEEEEeCCCEEEEEEeccCccc
Confidence 999999999 999999999987654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=3.9e-21 Score=155.72 Aligned_cols=89 Identities=18% Similarity=0.283 Sum_probs=70.7
Q ss_pred ceeeEEECC---CeEEEEEEc-CCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccC
Q 031365 54 ARVDWKETP---EAHVFKADL-PGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMD 129 (161)
Q Consensus 54 p~~dv~e~~---d~~~i~~~l-PG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 129 (161)
..++|.+++ +.|+|.++| ||++++||+|+++++ .|+|+|+++.+.+ .++++|+.+|.|.|+|.||++||++
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~ 295 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDAS 295 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC----------------CEEEEEEEECSSEECGG
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChH
Confidence 457777655 588999999 999999999999984 9999999876432 5788999999999999999999999
Q ss_pred CeEEEEeCCEEEEEEeCc
Q 031365 130 QIKASMESGVLTVTVPKV 147 (161)
Q Consensus 130 ~i~A~~~nGvL~I~~pK~ 147 (161)
+|+|+|+||||+|++||.
T Consensus 296 ~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 296 KTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp GCEEEEETTEEEEEEEEE
T ss_pred HeEEEEeCCEEEEEEecC
Confidence 999999999999999986
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.12 E-value=2.3e-10 Score=79.35 Aligned_cols=81 Identities=17% Similarity=0.248 Sum_probs=70.8
Q ss_pred CceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeE
Q 031365 53 NARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIK 132 (161)
Q Consensus 53 ~p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~ 132 (161)
.|+++++++++.+.|.+.+||+.++++.|.+.++ .|.|++... ++ ..|...+.|+..|+++..+
T Consensus 9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~-~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~e~s~ 72 (114)
T 1rl1_A 9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKLP-----SG----------EDYNLKLELLHPIIPEQST 72 (114)
T ss_dssp CCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEECT-----TS----------SEEEEEECBSSCCCGGGEE
T ss_pred CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC-EEEEEEEeC-----CC----------cEEEEEeeCCCcCCccccE
Confidence 4779999999999999999999999999999984 999997632 11 1377789999999999999
Q ss_pred EEEeCCEEEEEEeCcCC
Q 031365 133 ASMESGVLTVTVPKVEV 149 (161)
Q Consensus 133 A~~~nGvL~I~~pK~~~ 149 (161)
+++.+|.|.|+|+|.+.
T Consensus 73 ~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 73 FKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EEECSSSEEEEEECSSC
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.12 E-value=2e-10 Score=76.50 Aligned_cols=81 Identities=17% Similarity=0.281 Sum_probs=70.7
Q ss_pred CceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeE
Q 031365 53 NARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIK 132 (161)
Q Consensus 53 ~p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~ 132 (161)
.|+++++++++.+.|.+.+||+.++++.|.+.++ .|.|++... ++ ..|...+.|+..|+++..+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~-~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ-ILSVVIEVP-----GE----------DAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSS-BEEEEECCT-----TS----------CCEEECCBBSSCBCGGGCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECC-EEEEEEEcC-----CC----------cEEEEeeEcCCccCchhEE
Confidence 4789999999999999999999999999999984 999987532 11 1377788999999999999
Q ss_pred EEEeCCEEEEEEeCcCC
Q 031365 133 ASMESGVLTVTVPKVEV 149 (161)
Q Consensus 133 A~~~nGvL~I~~pK~~~ 149 (161)
+++.+|.|.|+|+|.++
T Consensus 66 ~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 66 YEVLSTKIEICLAKADI 82 (92)
T ss_dssp EEECSSCEEEEEEBSSS
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999865
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.60 E-value=1.2e-07 Score=67.39 Aligned_cols=77 Identities=14% Similarity=0.279 Sum_probs=67.3
Q ss_pred CceeeEEECCCeEEEEEEcCCCC--CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCC-ccC
Q 031365 53 NARVDWKETPEAHVFKADLPGLR--KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENV-KMD 129 (161)
Q Consensus 53 ~p~~dv~e~~d~~~i~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v-d~~ 129 (161)
+|...+.++++.++|.+.+|.++ ..++++.+++ +.+.+... .|.-++.||..| +.+
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~--------------------PYyLRL~LP~~V~e~~ 61 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHELIDDE 61 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS--------------------SSCEEECCSSCEECCS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC--------------------CeEEEecCCCeeecCC
Confidence 58899999999999999999999 8999999997 58888732 255679999997 989
Q ss_pred CeEEEE--eCCEEEEEEeCcCCC
Q 031365 130 QIKASM--ESGVLTVTVPKVEVT 150 (161)
Q Consensus 130 ~i~A~~--~nGvL~I~~pK~~~~ 150 (161)
..+|+| +.|.|+|++||..+.
T Consensus 62 ~~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESSTT
T ss_pred CcceeEeccCCEEEEEEeCCCCC
Confidence 999999 599999999998654
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.58 E-value=1e-06 Score=60.80 Aligned_cols=80 Identities=14% Similarity=0.297 Sum_probs=68.3
Q ss_pred ccCceeeEEECCCeEEEEEEcCCCC--CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCC-c
Q 031365 51 IVNARVDWKETPEAHVFKADLPGLR--KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENV-K 127 (161)
Q Consensus 51 ~~~p~~dv~e~~d~~~i~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v-d 127 (161)
..+|...|.++++.++|.+.+|.+. ..++++.+++ +.+....+ .|.-++.||..+ +
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~--------------------PYyLRL~lP~~vve 73 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHELID 73 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET--------------------TEEEEEECSSCEEC
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC--------------------CeEEEEecCcceec
Confidence 4569999999999999999999877 7899999997 58877743 266779999995 7
Q ss_pred cCCeEEEE--eCCEEEEEEeCcCCCC
Q 031365 128 MDQIKASM--ESGVLTVTVPKVEVTK 151 (161)
Q Consensus 128 ~~~i~A~~--~nGvL~I~~pK~~~~~ 151 (161)
.+..+|+| ++|.++|++||..+.+
T Consensus 74 d~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 74 DERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp STTCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCCcceEEeCCCcEEEEEEcCCcCCC
Confidence 78899999 5999999999997654
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.38 E-value=1.3e-06 Score=72.17 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=60.5
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCC-eE
Q 031365 54 ARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ-IK 132 (161)
Q Consensus 54 p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~-i~ 132 (161)
+++.|... .|.+++.|||+++++|++...++ .|+|+ .|.|+|.+.||....... ..
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~--------------------~g~~rR~i~LP~~L~~~~v~~ 354 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVE--------------------AGDQRRNIFLPPALSGRPITG 354 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEE--------------------ETTEEEEEECCTTTTTCCEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEE--------------------ECCEeecccCCHHHcCCCccc
Confidence 45665444 89999999999999999999986 99999 677999999999866654 78
Q ss_pred EEEeCCEEEEEEeCc
Q 031365 133 ASMESGVLTVTVPKV 147 (161)
Q Consensus 133 A~~~nGvL~I~~pK~ 147 (161)
|+|+||.|+|++-..
T Consensus 355 A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 355 AKFQNNYLIISFLEH 369 (374)
T ss_dssp EEEETTEEEEEECCC
T ss_pred cEEECCEEEEEEehh
Confidence 999999999998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=6.5e-05 Score=52.72 Aligned_cols=82 Identities=12% Similarity=0.212 Sum_probs=68.0
Q ss_pred cCceeeEEECCCeEEEEEEcCCC---CCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEE-CCCCCc
Q 031365 52 VNARVDWKETPEAHVFKADLPGL---RKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFR-LPENVK 127 (161)
Q Consensus 52 ~~p~~dv~e~~d~~~i~~~lPG~---~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~-LP~~vd 127 (161)
..+.++++++.+.+.|.+.+||+ .++++.|.+.. +.|.|..... .+. .|.-.+. |-..|+
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~-----~~~----------~y~~~~~~L~~~I~ 82 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNL-----NGK----------SYSMIVNNLLKPIS 82 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSC-----SSS----------CEEEEEECBSSCCC
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcC-----CCC----------cEEEEhHHhcCccC
Confidence 34689999999999999999999 88999999998 4899986421 111 2555675 999999
Q ss_pred cCCeEEEEeCCEEEEEEeCcCC
Q 031365 128 MDQIKASMESGVLTVTVPKVEV 149 (161)
Q Consensus 128 ~~~i~A~~~nGvL~I~~pK~~~ 149 (161)
+++.+.....+.+.|+|-|.+.
T Consensus 83 ~e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 83 VEGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp TTTCEEEEETTEEEEEEECSSS
T ss_pred cccCEEEEeCCEEEEEEEECCC
Confidence 9999999999999999999875
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.00 E-value=4.4e-05 Score=54.28 Aligned_cols=92 Identities=13% Similarity=0.199 Sum_probs=70.0
Q ss_pred ccCceeeEEEC-CCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeee---EEEEEEECCCCC
Q 031365 51 IVNARVDWKET-PEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSG---MFSRRFRLPENV 126 (161)
Q Consensus 51 ~~~p~~dv~e~-~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g---~f~r~~~LP~~v 126 (161)
...++++++++ .+.+.|.+.++++.++++.|.+.+ +.|.|......... ...--..| .|.-.+.|-..|
T Consensus 17 ~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~------l~~~~a~g~~~~y~~~~~L~~~I 89 (134)
T 1wh0_A 17 LAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNF------LRLHPGCGPHTTFRWQVKLRNLI 89 (134)
T ss_dssp ESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHH------HHHSTTCCTTSCEEEEEEBSSCE
T ss_pred ccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcc------cccccccCcceeEEEeccccccC
Confidence 34688999999 999999999999999999999998 48999865321110 00000001 366668899999
Q ss_pred ccCCeEEEEeCCEEEEEEeCcCC
Q 031365 127 KMDQIKASMESGVLTVTVPKVEV 149 (161)
Q Consensus 127 d~~~i~A~~~nGvL~I~~pK~~~ 149 (161)
+++..+.++..+-+.|+|.|.+.
T Consensus 90 ~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 90 EPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEEECSSEEEEEEEESSS
T ss_pred CchhCEEEEeCCEEEEEEEECCC
Confidence 99988888889999999999854
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.97 E-value=0.00013 Score=50.89 Aligned_cols=85 Identities=14% Similarity=0.269 Sum_probs=67.3
Q ss_pred ccccCceeeEEECCCeEEEEEEcC-CC-CCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCC
Q 031365 49 SAIVNARVDWKETPEAHVFKADLP-GL-RKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENV 126 (161)
Q Consensus 49 ~~~~~p~~dv~e~~d~~~i~~~lP-G~-~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 126 (161)
.+...|.+.+.++.+.+.|++.|| |+ +++||.|.+.. +.|.|..... .+.. +.-...|...|
T Consensus 15 nG~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~-----~~~~----------~~~~~~L~~~I 78 (124)
T 1wgv_A 15 NGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE-----NGER----------VLMEGKLTHKI 78 (124)
T ss_dssp SSBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS-----SSEE----------EEEEEEBSSCB
T ss_pred CCCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc-----CCCc----------eEEcccccCcC
Confidence 344568899999999999999999 88 89999999998 4999986421 1111 22346799999
Q ss_pred ccCCeEEEEeCCE-EEEEEeCcCC
Q 031365 127 KMDQIKASMESGV-LTVTVPKVEV 149 (161)
Q Consensus 127 d~~~i~A~~~nGv-L~I~~pK~~~ 149 (161)
+++..+..+.++- |.|+|-|.+.
T Consensus 79 ~~e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 79 NTESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp CTTTCEEEECTTSEEEEEECBSSS
T ss_pred CCcCCEEEEeCCCEEEEEEEECCC
Confidence 9999999998874 9999999753
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.92 E-value=0.00011 Score=51.19 Aligned_cols=85 Identities=15% Similarity=0.191 Sum_probs=67.9
Q ss_pred CCCccccCceeeEEECCCeEEEEEEcC-C--CCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEEC
Q 031365 46 PETSAIVNARVDWKETPEAHVFKADLP-G--LRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRL 122 (161)
Q Consensus 46 ~~~~~~~~p~~dv~e~~d~~~i~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~L 122 (161)
....+...|.+.+.++.+.+.|++.|| | ++.+||.|.+... .|.|...- .. +.-...|
T Consensus 9 ~~~nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~-~l~v~~kg--------~~----------~~~~g~L 69 (121)
T 3qor_A 9 NLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR-HLRVGLKG--------QP----------AIIDGEL 69 (121)
T ss_dssp CTTSSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETT-EEEEEETT--------SC----------CSEEEEB
T ss_pred cCCCCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcC-EEEEEEcC--------cc----------eEEeccc
Confidence 444556678999999999999999999 4 7899999999984 88886421 00 1123578
Q ss_pred CCCCccCCeEEEEeCC-EEEEEEeCcCC
Q 031365 123 PENVKMDQIKASMESG-VLTVTVPKVEV 149 (161)
Q Consensus 123 P~~vd~~~i~A~~~nG-vL~I~~pK~~~ 149 (161)
...|+++.....+++| .|.|+|-|.+.
T Consensus 70 ~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 70 YNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp SSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred cccccccccEEEEcCCCEEEEEEEECCC
Confidence 9999999999999998 99999999864
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.80 E-value=9.9e-05 Score=51.65 Aligned_cols=79 Identities=15% Similarity=0.120 Sum_probs=65.0
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEE
Q 031365 54 ARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKA 133 (161)
Q Consensus 54 p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A 133 (161)
|.++++++.+.+.|++.+|++ +++.|.+... .|.+++.... ++ ..|.-.+.|-..|+++..+.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~-~l~~~~~~~~----~~----------~~y~~~l~L~~~I~~e~S~~ 66 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEKS-KLTFSCLGGS----DN----------FKHLNEIDLFHCIDPNDSKH 66 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEETT-EEEEEEEETT----TT----------EEEEEEEEBSSCEEEEEEEE
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEECC-EEEEEEEeCC----CC----------ceEEEEEEccceeccccCEE
Confidence 379999999999999999996 6999999984 9999876311 11 12666788999999999999
Q ss_pred EEeCCEEEEEEeCcCC
Q 031365 134 SMESGVLTVTVPKVEV 149 (161)
Q Consensus 134 ~~~nGvL~I~~pK~~~ 149 (161)
+..++-+.|+|.|.++
T Consensus 67 ~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 67 KRTDRSILCCLRKGES 82 (125)
T ss_dssp EECSSCEEEEEEESST
T ss_pred EECCCEEEEEEEECCC
Confidence 9988899999999864
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.79 E-value=0.00023 Score=50.06 Aligned_cols=80 Identities=20% Similarity=0.285 Sum_probs=64.8
Q ss_pred ccCceeeEEECCCeEEEEEEcC-C--CCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCc
Q 031365 51 IVNARVDWKETPEAHVFKADLP-G--LRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVK 127 (161)
Q Consensus 51 ~~~p~~dv~e~~d~~~i~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 127 (161)
...|.+.+.++.+.+.|.+.|| | ++++++.|.+.. +.|.|.... .. ..-...|...|+
T Consensus 5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg--------~~----------~~~~~~L~~~I~ 65 (131)
T 1wfi_A 5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKG--------QP----------PVVDGELYNEVK 65 (131)
T ss_dssp SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETT--------SC----------CSBCSCBSSCBC
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECC--------ce----------EEEecccccccc
Confidence 3457899999999999999999 6 899999999998 499998531 00 011245888999
Q ss_pred cCCeEEEEeCC-EEEEEEeCcCC
Q 031365 128 MDQIKASMESG-VLTVTVPKVEV 149 (161)
Q Consensus 128 ~~~i~A~~~nG-vL~I~~pK~~~ 149 (161)
++..+..+.+| .|.|+|-|.+.
T Consensus 66 ~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 66 VEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp STTCEEEEETTTEEEEEEEBSSS
T ss_pred cccCEEEEcCCCEEEEEEEECCC
Confidence 99999999998 89999999864
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.63 E-value=0.00039 Score=48.92 Aligned_cols=76 Identities=13% Similarity=0.208 Sum_probs=61.2
Q ss_pred CceeeEEECCCeEEEEEEcC-CCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCe
Q 031365 53 NARVDWKETPEAHVFKADLP-GLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQI 131 (161)
Q Consensus 53 ~p~~dv~e~~d~~~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i 131 (161)
.|.+.+.++.+.+.|.+.|| |++++++.|.+... .|.|... +.. .-...|...|+++..
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~--------g~~-----------~~~~~L~~~I~~e~S 63 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGK-KICVKNQ--------GEI-----------VIDGELLHEVDVSSL 63 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETT-EEEEEET--------TEE-----------EEEEEBSSCEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECC-EEEEEEC--------CEe-----------eEccccccccccccC
Confidence 37899999999999999996 99999999999984 9999852 100 123578899999999
Q ss_pred EEEEeCCEEEEEEeCcC
Q 031365 132 KASMESGVLTVTVPKVE 148 (161)
Q Consensus 132 ~A~~~nGvL~I~~pK~~ 148 (161)
+..+.++-|.|+|-|..
T Consensus 64 ~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 64 WWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEETTEEEEEEEESS
T ss_pred EEEEeCCEEEEEEEECC
Confidence 99999999999999973
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.58 E-value=0.00087 Score=48.72 Aligned_cols=79 Identities=14% Similarity=0.267 Sum_probs=65.3
Q ss_pred ccCceeeEEECCCeEEEEEEcC-CCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccC
Q 031365 51 IVNARVDWKETPEAHVFKADLP-GLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMD 129 (161)
Q Consensus 51 ~~~p~~dv~e~~d~~~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 129 (161)
...|.+.+.++.+.+.|+|.|| |++.++|.|.+.. +.|.|..+ +.. + -...|...|+++
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--------g~~----------~-l~g~L~~~I~~e 70 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--------GRE----------I-LKGKLFDSTIAD 70 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--------TEE----------E-EEEEBSSCBCGG
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--------CEE----------E-EeeccccccCcc
Confidence 3458899999999999999998 8999999999998 48998752 100 1 236799999999
Q ss_pred CeEEEEeCC-EEEEEEeCcCC
Q 031365 130 QIKASMESG-VLTVTVPKVEV 149 (161)
Q Consensus 130 ~i~A~~~nG-vL~I~~pK~~~ 149 (161)
..+..+.++ .|.|+|-|.+.
T Consensus 71 eS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 71 EGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp GCEEEEECCCEEEEEEEBSSC
T ss_pred ccEEEEcCCcEEEEEEEEcCC
Confidence 999999887 49999999875
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.52 E-value=0.00021 Score=51.66 Aligned_cols=78 Identities=15% Similarity=0.296 Sum_probs=63.9
Q ss_pred CceeeEEECCCeEEEEEEcCCCCCCCeEEEEe-CCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCe
Q 031365 53 NARVDWKETPEAHVFKADLPGLRKEEVKVEVE-DDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQI 131 (161)
Q Consensus 53 ~p~~dv~e~~d~~~i~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i 131 (161)
.|.++++++.+.++|+|.++++ ++++|.+. . +.|.+++. . ..+ ..|.-.+.|-..|+++ .
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~----~~~----------~~y~~~l~L~~~Idpe-S 64 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-G----AQG----------ERFEFSLELYGKIMTE-Y 64 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-T----TTT----------EEEEEEEEBSSCEEEE-E
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-c----CCC----------ceEEEEeEhhhccccc-c
Confidence 4889999999999999999998 47888888 6 58999986 1 111 1366678899999999 8
Q ss_pred EEEEeCCEEEEEEeCcCC
Q 031365 132 KASMESGVLTVTVPKVEV 149 (161)
Q Consensus 132 ~A~~~nGvL~I~~pK~~~ 149 (161)
+.+....-+.|+|.|.++
T Consensus 65 ~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 65 RKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEEESSSEEEEEEECCS
T ss_pred eEEecCCEEEEEEEECCC
Confidence 888888889999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.42 E-value=8.5e-05 Score=52.70 Aligned_cols=85 Identities=12% Similarity=0.260 Sum_probs=59.5
Q ss_pred CceeeEEECCCe-------EEEEEEcCCCCCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCC
Q 031365 53 NARVDWKETPEA-------HVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPEN 125 (161)
Q Consensus 53 ~p~~dv~e~~d~-------~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 125 (161)
.|.+.+.++.+. +.|+|.+|++. ++.|.+.. +.|.+++.........+ ...|.-.+.|...
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~---------~~~y~~~l~L~~~ 73 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDEN---------VHHYQLHIDLYKE 73 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------CEEBCEEEECSSC
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCcc---------CceEEEEEEChhh
Confidence 477888888876 99999999984 88888887 49999876421000000 0135667899999
Q ss_pred CccCCeEEEEeCCE-EEEEEeCcCC
Q 031365 126 VKMDQIKASMESGV-LTVTVPKVEV 149 (161)
Q Consensus 126 vd~~~i~A~~~nGv-L~I~~pK~~~ 149 (161)
|+++..+.++.++. |.|+|.|.++
T Consensus 74 Idpe~S~~~v~~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 74 IIPEKTMHKVANGQHYFLKLYKKDL 98 (134)
T ss_dssp CCSSSEEEEECCC--CEEEEEECSS
T ss_pred ccccccEEEECCCEEEEEEEEECCC
Confidence 99999999999888 9999999873
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=83.74 E-value=2.5 Score=26.75 Aligned_cols=33 Identities=12% Similarity=0.257 Sum_probs=28.5
Q ss_pred EEEEEEECCCCCccCCeEEEEeCCEEEEEEeCcC
Q 031365 115 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 148 (161)
Q Consensus 115 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~~ 148 (161)
.|.-.+.|| +++++.|+..+++|.|+|..-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 477789998 699999999999999999997654
No 29
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=83.14 E-value=5 Score=26.11 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=26.7
Q ss_pred EEEEEEcC-CCCCCCeEEEEeCCeeEEEEEEEeee
Q 031365 65 HVFKADLP-GLRKEEVKVEVEDDRVLQISGQRKIE 98 (161)
Q Consensus 65 ~~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 98 (161)
|.-.+.|| +++.+.++-.+.+| .|+|+..+...
T Consensus 63 f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~ 96 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSC
T ss_pred EEEEEECCCCcchhHcEEEEECC-EEEEEEEccCc
Confidence 34467899 68999999999998 99999876543
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=77.04 E-value=4 Score=25.99 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=28.4
Q ss_pred EEEEEEECCCCCccCCeEEEEeCCEEEEEEeCcC
Q 031365 115 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 148 (161)
Q Consensus 115 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~~ 148 (161)
.|.-.+.|| +++.+.|+..+.+|.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 377789999 799999999999999999987643
No 31
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=74.83 E-value=6.7 Score=25.16 Aligned_cols=32 Identities=16% Similarity=0.254 Sum_probs=27.0
Q ss_pred eEEEEEEcC-CCCCCCeEEEEeCCeeEEEEEEEe
Q 031365 64 AHVFKADLP-GLRKEEVKVEVEDDRVLQISGQRK 96 (161)
Q Consensus 64 ~~~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~ 96 (161)
.|.-.+.|| +++.+.|+-.+.+| .|+|+..+.
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~ 97 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNG-VLEIRIPKR 97 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC
T ss_pred EEEEEEECCCCcChHHeEEEEeCC-EEEEEEecC
Confidence 566678999 58999999999998 999997654
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=74.30 E-value=5 Score=26.15 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=28.2
Q ss_pred EEEEEECCCCCccCCeEEEEeCCEEEEEEeCcC
Q 031365 116 FSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 148 (161)
Q Consensus 116 f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~~ 148 (161)
|.-.+.|| +++.+.|+..+.+|.|+|..-+..
T Consensus 13 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 13 FSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp EEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 66679999 799999999999999999987754
No 33
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=74.14 E-value=11 Score=26.54 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=27.7
Q ss_pred EEEEEECCCCCccCCeEEEEeCCEEEEEEeCcCC
Q 031365 116 FSRRFRLPENVKMDQIKASMESGVLTVTVPKVEV 149 (161)
Q Consensus 116 f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~~~ 149 (161)
|.-.+.|| +++.+.|+..+++|.|+|+.-+...
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 44557898 5899999999999999999987763
No 34
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=73.14 E-value=6.4 Score=25.89 Aligned_cols=32 Identities=3% Similarity=0.109 Sum_probs=27.9
Q ss_pred EEEEEEECCCCCccCCeEEEEeCCEEEEEEeCc
Q 031365 115 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 147 (161)
Q Consensus 115 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~ 147 (161)
.|.-.+.|| +++++.|+..+.+|.|+|..-+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 477789998 69999999999999999998654
No 35
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=73.07 E-value=5.9 Score=24.46 Aligned_cols=31 Identities=19% Similarity=0.152 Sum_probs=18.2
Q ss_pred CCeEEEEeCCEEEEEEeCcCCCCCCeeEEecc
Q 031365 129 DQIKASMESGVLTVTVPKVEVTKPDVKAIAIS 160 (161)
Q Consensus 129 ~~i~A~~~nGvL~I~~pK~~~~~~~~~~I~I~ 160 (161)
..|.|.|+||||+--=|-.- ......+|.|+
T Consensus 3 k~IeAiYEnGVfkPLe~l~L-~EG~kV~I~I~ 33 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKVDL-KEGERVKIKLE 33 (69)
T ss_dssp CCEEEEEETTEEEESSCCCC-CTTEEEEEECC
T ss_pred ceEEEEEECCEEeECCcCCC-CCCCEEEEEEE
Confidence 45999999999975433222 22333455543
No 36
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=70.90 E-value=11 Score=25.34 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=28.1
Q ss_pred EEEEEECCCCCccCCeEEEEeC-CEEEEEEeCcCC
Q 031365 116 FSRRFRLPENVKMDQIKASMES-GVLTVTVPKVEV 149 (161)
Q Consensus 116 f~r~~~LP~~vd~~~i~A~~~n-GvL~I~~pK~~~ 149 (161)
|.-.+.|| +++.+.|+..+.+ |.|+|+.-+...
T Consensus 36 ~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 55568898 6999999999999 999999987654
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=65.98 E-value=17 Score=25.41 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=26.5
Q ss_pred EEEEEECCCCCccCCeEEEE-eCCEEEEEEeCcCC
Q 031365 116 FSRRFRLPENVKMDQIKASM-ESGVLTVTVPKVEV 149 (161)
Q Consensus 116 f~r~~~LP~~vd~~~i~A~~-~nGvL~I~~pK~~~ 149 (161)
|.-.+.|| +++.+.|+..+ +++.|+|+.-+...
T Consensus 55 ~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 55 HVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 44457898 69999999999 46799999987654
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=57.27 E-value=13 Score=26.82 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=27.5
Q ss_pred EEEEEECCCCCccCCeEEEEeCCEEEEEEeCcC
Q 031365 116 FSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 148 (161)
Q Consensus 116 f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~~ 148 (161)
|.-.+.|| +++++.|+.++.+|.|+|+.-+..
T Consensus 75 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 75 FSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 66678898 799999999999999999987643
No 39
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=49.10 E-value=46 Score=24.89 Aligned_cols=46 Identities=17% Similarity=0.304 Sum_probs=30.9
Q ss_pred CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEeCCEEEEEEeCc
Q 031365 76 KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 147 (161)
Q Consensus 76 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~ 147 (161)
++.|+|++++ +.++|+|.+. ...+. |+. .++...++|.|.|..+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG------------------~L~~~--~~~-----~v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKG------------------ELTVP--YNT-----ELTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCE------------------EEEEE--CCC-----CeEEEEECCEEEEEcCCC
Confidence 3678899987 5999998753 34433 343 355567899988876544
No 40
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=48.32 E-value=27 Score=22.79 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=15.1
Q ss_pred CCCeEEEEeCCeeEEEEEEE
Q 031365 76 KEEVKVEVEDDRVLQISGQR 95 (161)
Q Consensus 76 ~edi~V~v~~~~~L~I~g~~ 95 (161)
++.|+|++++ +.++|+|.+
T Consensus 20 P~gV~V~i~~-~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEET-TEEEEEETT
T ss_pred CCCCEEEEeC-CEEEEECCC
Confidence 3678899987 599999864
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=43.65 E-value=56 Score=23.59 Aligned_cols=46 Identities=26% Similarity=0.480 Sum_probs=31.2
Q ss_pred CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEeCCEEEEEEeCc
Q 031365 76 KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 147 (161)
Q Consensus 76 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~ 147 (161)
++.|+|++++ +.++|+|.+ |...+. |+.. ++...++|.|.|..+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPK------------------GELTRT--FHPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CCTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEE--cCCC-----EEEEEeCCEEEEEcCCC
Confidence 4678899987 599999864 334443 4543 45567899988876543
No 42
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=43.61 E-value=13 Score=24.64 Aligned_cols=17 Identities=35% Similarity=0.636 Sum_probs=15.0
Q ss_pred CeEEEEeCCEEEEEEeC
Q 031365 130 QIKASMESGVLTVTVPK 146 (161)
Q Consensus 130 ~i~A~~~nGvL~I~~pK 146 (161)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 48899999999999974
No 43
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=42.08 E-value=38 Score=22.88 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=23.6
Q ss_pred EEEEEEECCCCCccCCeEEEEeCCEEEEEE
Q 031365 115 MFSRRFRLPENVKMDQIKASMESGVLTVTV 144 (161)
Q Consensus 115 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~ 144 (161)
...-+|.||.+++.+.+...+...-|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 355678999999999999999999999987
No 44
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=42.00 E-value=57 Score=21.67 Aligned_cols=37 Identities=8% Similarity=0.198 Sum_probs=27.7
Q ss_pred EEECCCeEEEEEEc-CCCCCCCeEEEEeCCeeEEEEEEEe
Q 031365 58 WKETPEAHVFKADL-PGLRKEEVKVEVEDDRVLQISGQRK 96 (161)
Q Consensus 58 v~e~~d~~~i~~~l-PG~~~edi~V~v~~~~~L~I~g~~~ 96 (161)
+.+.++.++|.+.+ ||.+++.|. .+.++ .|.|+-.-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~~-~LkV~v~Ap 45 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHGD-EVKVAITAP 45 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECSS-CEEEECCCC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccCC-EEEEEEecC
Confidence 56778889999988 999998874 45665 888875533
No 45
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=41.71 E-value=21 Score=24.44 Aligned_cols=16 Identities=25% Similarity=0.590 Sum_probs=14.5
Q ss_pred eEEEEeCCEEEEEEeC
Q 031365 131 IKASMESGVLTVTVPK 146 (161)
Q Consensus 131 i~A~~~nGvL~I~~pK 146 (161)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7899999999999974
No 46
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.17 E-value=47 Score=24.18 Aligned_cols=43 Identities=26% Similarity=0.351 Sum_probs=28.3
Q ss_pred CCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEeCCEEEEEE
Q 031365 77 EEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTV 144 (161)
Q Consensus 77 edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~ 144 (161)
+.++|++++ +.++|+|.+ |...+. ++. ..++...+++.|.|..
T Consensus 15 ~gV~v~i~~-~~V~VkGpk------------------G~L~~~--~~~----~~v~i~~~~~~l~v~~ 57 (184)
T 3j21_F 15 EGVEVTVEG-YKVKVKGPK------------------GELERE--FFW----PGIQIFTEDGNVVIYK 57 (184)
T ss_dssp SSCEEEESS-SEEEEECSS------------------CEEEEE--CCC----TTCEEEEETTEEEEEC
T ss_pred CCcEEEEeC-CEEEEEcCC------------------eEEEEE--ecC----CcEEEEEeCCEEEEEE
Confidence 678999986 699999764 334443 331 1245567889888874
No 47
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=37.67 E-value=60 Score=23.50 Aligned_cols=47 Identities=19% Similarity=0.360 Sum_probs=30.8
Q ss_pred CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEeCCEEEEEEeCc
Q 031365 76 KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 147 (161)
Q Consensus 76 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pK~ 147 (161)
++.++|++++ +.++|+|.+ |...+.|. +. .++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpk------------------G~L~~~~~-~~-----~v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDN------------------GSVTRRLW-YP-----DIDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEECC-CT-----TCEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEEE-CC-----eEEEEEECCEEEEEcCCC
Confidence 3678899987 599999864 23444331 33 345567899988876543
No 48
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=35.55 E-value=1.4e+02 Score=22.45 Aligned_cols=65 Identities=9% Similarity=0.143 Sum_probs=38.9
Q ss_pred EcCCCCCCCeEEEEeC-CeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEeCCEEEEE
Q 031365 70 DLPGLRKEEVKVEVED-DRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVT 143 (161)
Q Consensus 70 ~lPG~~~edi~V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGvL~I~ 143 (161)
.|||+..+==-+.++. ++.|.+.... .......-.. |.+.|+++|...-|.+.|... .+|.+.|.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~-------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK-------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET-------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC-------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 5899987533366662 2466654332 1222222223 778899999877788877653 66666554
No 49
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=34.47 E-value=88 Score=24.70 Aligned_cols=48 Identities=21% Similarity=0.356 Sum_probs=29.9
Q ss_pred CCCCeEEEEeCCeeEEEEEEEeeeecC-CC---CcEE-------EE--eeeeeEEEEEEECCCC
Q 031365 75 RKEEVKVEVEDDRVLQISGQRKIEKED-KN---DTWH-------RV--ERSSGMFSRRFRLPEN 125 (161)
Q Consensus 75 ~~edi~V~v~~~~~L~I~g~~~~~~~~-~~---~~~~-------~~--e~~~g~f~r~~~LP~~ 125 (161)
+++++.|+ +| .|+|++.+...... .+ ..|. .+ ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v~--dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSVK--KG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEEE--TT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEEE--CC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 55666554 77 89999987643110 01 1232 11 2567899999999975
No 50
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=33.13 E-value=81 Score=22.77 Aligned_cols=43 Identities=23% Similarity=0.425 Sum_probs=29.4
Q ss_pred CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEEeCCEEEEEE
Q 031365 76 KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTV 144 (161)
Q Consensus 76 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~ 144 (161)
++.|+|++++ +.++|+|.+ |...+. |+.. ++...+++.|.|..
T Consensus 12 P~gV~v~i~~-~~v~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~ 54 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPK------------------GELEVP--VSPE-----MRVVVEEGVVRVER 54 (180)
T ss_dssp CTTCEEEEET-TEEEEECSS------------------CEEEEE--CCTT-----SEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEeCC------------------cEEEEE--eCCC-----EEEEEECCEEEEEE
Confidence 4788999987 599999764 334443 4543 44556799888874
No 51
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=31.95 E-value=65 Score=24.15 Aligned_cols=44 Identities=25% Similarity=0.296 Sum_probs=24.4
Q ss_pred EEEeCCeeEEEEEEEeeeec--CCCCcEEE---EeeeeeEEEEEEECCCC
Q 031365 81 VEVEDDRVLQISGQRKIEKE--DKNDTWHR---VERSSGMFSRRFRLPEN 125 (161)
Q Consensus 81 V~v~~~~~L~I~g~~~~~~~--~~~~~~~~---~e~~~g~f~r~~~LP~~ 125 (161)
|.+++| .|+|++.+..... -...+... ....+|.|+-++.||..
T Consensus 49 v~v~~G-~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGG-VLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETT-EEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECC-EEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 344576 8899887653100 00111111 12356889989999964
No 52
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=31.37 E-value=61 Score=21.52 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=26.3
Q ss_pred EEEEEEECCCCC-ccCCeEEEEeCCEEEEEEe
Q 031365 115 MFSRRFRLPENV-KMDQIKASMESGVLTVTVP 145 (161)
Q Consensus 115 ~f~r~~~LP~~v-d~~~i~A~~~nGvL~I~~p 145 (161)
...-+|.||.++ +.+.+...+...-|+|.+.
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 355678999888 9999999999999999873
No 53
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=29.94 E-value=38 Score=23.25 Aligned_cols=17 Identities=41% Similarity=0.567 Sum_probs=15.0
Q ss_pred CCeEEEEeCCEEEEEEe
Q 031365 129 DQIKASMESGVLTVTVP 145 (161)
Q Consensus 129 ~~i~A~~~nGvL~I~~p 145 (161)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 46889999999999995
No 54
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=28.98 E-value=66 Score=22.50 Aligned_cols=31 Identities=13% Similarity=0.267 Sum_probs=26.5
Q ss_pred EEEEEEECCCCCccCCeEEEEeCCEEEEEEe
Q 031365 115 MFSRRFRLPENVKMDQIKASMESGVLTVTVP 145 (161)
Q Consensus 115 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~p 145 (161)
...-+|.||..+..+.+...+...-|+|.+.
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred EEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 3556789999999999999999999999873
No 55
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=28.79 E-value=1.5e+02 Score=21.60 Aligned_cols=46 Identities=22% Similarity=0.297 Sum_probs=30.2
Q ss_pred CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEEE--eCCEEEEEEeC
Q 031365 76 KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASM--ESGVLTVTVPK 146 (161)
Q Consensus 76 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~--~nGvL~I~~pK 146 (161)
++.++|++++ +.++|+|.+. ...+. |+. ..++..+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG------------------~L~~~--~~~----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPRG------------------KLTRN--FKH----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEET-TEEEEEETTE------------------EEEEE--CCC----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeC-CEEEEECCCc------------------eEEEE--ccC----CcEEEEEEcCCCEEEEEECC
Confidence 4688999987 5999998642 34443 431 2345556 78888888653
No 56
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=28.64 E-value=35 Score=20.97 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=17.9
Q ss_pred CCCCCCeEEEEeCCeeEEEEEEE
Q 031365 73 GLRKEEVKVEVEDDRVLQISGQR 95 (161)
Q Consensus 73 G~~~edi~V~v~~~~~L~I~g~~ 95 (161)
.|+.+.|.+....| .|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTE-EEEEEEEC
T ss_pred EECCCEEEEEeCce-EEEEEcCC
Confidence 46778888988886 99999884
No 57
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=27.32 E-value=1.2e+02 Score=20.42 Aligned_cols=30 Identities=27% Similarity=0.417 Sum_probs=19.0
Q ss_pred CCeEEEE---eCCEEEEEEeCcCCCCCCeeEEecc
Q 031365 129 DQIKASM---ESGVLTVTVPKVEVTKPDVKAIAIS 160 (161)
Q Consensus 129 ~~i~A~~---~nGvL~I~~pK~~~~~~~~~~I~I~ 160 (161)
.+|+..| .||+|.|++--....+ ...|.|+
T Consensus 98 ~~IeVtf~iD~nGiL~V~a~d~~tg~--~~~i~i~ 130 (135)
T 1q5l_A 98 PQIEVTFDIDADGILHVSAKDKNSGK--EQKITIK 130 (135)
T ss_dssp CCEEEEEEECTTSEEEEEEEETTTCC--EEEEEEE
T ss_pred eEEEEEEEECCCCEEEEEEEECCCCC--EEEEEEe
Confidence 3577776 6999999986443332 3455553
No 58
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=26.23 E-value=88 Score=20.68 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=26.9
Q ss_pred EEEEEEECCCC--CccCCeEEEEeCCEEEEEEe
Q 031365 115 MFSRRFRLPEN--VKMDQIKASMESGVLTVTVP 145 (161)
Q Consensus 115 ~f~r~~~LP~~--vd~~~i~A~~~nGvL~I~~p 145 (161)
...-+|.||.+ ++.+.+...+...-|+|.+.
T Consensus 27 eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 27 ELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp EEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred eEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 46667999988 89999999999999999885
No 59
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=24.99 E-value=52 Score=22.34 Aligned_cols=26 Identities=8% Similarity=0.095 Sum_probs=21.9
Q ss_pred cCCCCCCCeEEEEeCCeeEEEEEEEee
Q 031365 71 LPGLRKEEVKVEVEDDRVLQISGQRKI 97 (161)
Q Consensus 71 lPG~~~edi~V~v~~~~~L~I~g~~~~ 97 (161)
-|.+++-.|.|.+++| .++++|.-..
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESC
T ss_pred CCcccceeEEEEEECC-EEEEEEECCC
Confidence 3667778899999997 9999999864
No 60
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=24.39 E-value=1e+02 Score=20.51 Aligned_cols=30 Identities=10% Similarity=0.138 Sum_probs=25.9
Q ss_pred EEEEEECCCC--CccCCeEEEEeCCEEEEEEe
Q 031365 116 FSRRFRLPEN--VKMDQIKASMESGVLTVTVP 145 (161)
Q Consensus 116 f~r~~~LP~~--vd~~~i~A~~~nGvL~I~~p 145 (161)
..-+|.||.+ +..+.+...+...-|+|.+.
T Consensus 19 V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 19 LDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp EEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred EEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 4556889987 89999999999999999983
No 61
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=24.15 E-value=1.6e+02 Score=21.44 Aligned_cols=46 Identities=20% Similarity=0.491 Sum_probs=29.9
Q ss_pred CCCeEEEEeCCeeEEEEEEEeeeecCCCCcEEEEeeeeeEEEEEEECCCCCccCCeEEE-EeCCEEEEEEeC
Q 031365 76 KEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKAS-MESGVLTVTVPK 146 (161)
Q Consensus 76 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~-~~nGvL~I~~pK 146 (161)
++.++|++++ +.++|+|.+. ...+ .|+. . .+.-. .++|.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG------------------~L~~--~~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPRG------------------TLTK--NLKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEETTE------------------EEEE--ECTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCCe------------------EEEE--EccC-C---cEEEEEecCCeEEEEECC
Confidence 4788999987 5999998642 3443 3443 1 33444 468888888653
No 62
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=24.10 E-value=60 Score=24.10 Aligned_cols=14 Identities=14% Similarity=0.392 Sum_probs=11.0
Q ss_pred eeeEEEEEEECCCC
Q 031365 112 SSGMFSRRFRLPEN 125 (161)
Q Consensus 112 ~~g~f~r~~~LP~~ 125 (161)
.+|.|+-++.||..
T Consensus 86 ~yG~~E~r~klp~g 99 (245)
T 2hyk_A 86 QYGRVEASIQIPRG 99 (245)
T ss_dssp CSEEEEEEEECCCS
T ss_pred cCCeEEEEEEcCCC
Confidence 46888888999864
No 63
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=23.08 E-value=1.5e+02 Score=22.69 Aligned_cols=43 Identities=16% Similarity=0.224 Sum_probs=26.6
Q ss_pred CCCCeEEEEeCCeeEEEEEEEeeeecCCCCcEE-EEeeeeeEEEEEEECCCC
Q 031365 75 RKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWH-RVERSSGMFSRRFRLPEN 125 (161)
Q Consensus 75 ~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~-~~e~~~g~f~r~~~LP~~ 125 (161)
.++++.| ++| .|+|++.+.. +..+. .....+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~t-----sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDSTS-----GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSSC-----CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecCC-----CCEEEECceEeeEEEEEEEEeCCC
Confidence 4556655 566 5888765421 12222 234568999999999975
No 64
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=22.89 E-value=80 Score=18.02 Aligned_cols=21 Identities=19% Similarity=0.414 Sum_probs=16.9
Q ss_pred CCCCeEEEEeCCeeEEEEEEEe
Q 031365 75 RKEEVKVEVEDDRVLQISGQRK 96 (161)
Q Consensus 75 ~~edi~V~v~~~~~L~I~g~~~ 96 (161)
.-+||.|..+++ .++|.|..+
T Consensus 31 gyndinvtwdgd-tvtvegqle 51 (62)
T 2gjh_A 31 GYNDINVTWDGD-TVTVEGQLE 51 (62)
T ss_dssp TCCSCEEEECSS-CEEEEEECC
T ss_pred CcccceeEEcCC-EEEEEeEEc
Confidence 347999999975 999998754
No 65
>3cdw_H Protein 3B, VPG; RNA-dependent RNA polymerase, protein primer vizier viral enzymes involved in replication, transferase-V protein complex; 2.50A {Coxsackievirus B3} PDB: 2bbl_A 2bbp_A
Probab=21.79 E-value=44 Score=16.44 Aligned_cols=18 Identities=17% Similarity=0.390 Sum_probs=11.3
Q ss_pred EeCcCCCCCCeeEEeccC
Q 031365 144 VPKVEVTKPDVKAIAISG 161 (161)
Q Consensus 144 ~pK~~~~~~~~~~I~I~~ 161 (161)
+|+...+.+.-|++.++|
T Consensus 6 ~p~~~~k~P~lR~a~vQG 23 (26)
T 3cdw_H 6 VPNQKPRVPTLRQAKVQX 23 (26)
T ss_pred CCcccCCCCeeEEEEEee
Confidence 355555556667777776
No 66
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=20.63 E-value=1.1e+02 Score=22.64 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=27.5
Q ss_pred eeeEEECCCeEEEEEEcCCCCCCCeEEEEeCCeeEEEEEEE
Q 031365 55 RVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQR 95 (161)
Q Consensus 55 ~~dv~e~~d~~~i~~~lPG~~~edi~V~v~~~~~L~I~g~~ 95 (161)
.+.+...++.+.|+++-+---.+.|++++.++ .|.|.-+.
T Consensus 33 ~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g-~L~I~~~~ 72 (250)
T 3jx8_A 33 DFEYEQSDKAPYLSVTIDENLFDYLVTEVEGG-TLKIYPKS 72 (250)
T ss_dssp EEEEEECSSCCEEEEEEEGGGGGGEEEEEETT-EEEEEECB
T ss_pred EEEEEECCCCceEEEEECccccceEEEEEECC-EEEEEEcC
Confidence 34555554566777776655567899999886 99998653
No 67
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=20.41 E-value=41 Score=20.98 Aligned_cols=15 Identities=13% Similarity=0.456 Sum_probs=12.2
Q ss_pred cCCeEEEEeCCEEEE
Q 031365 128 MDQIKASMESGVLTV 142 (161)
Q Consensus 128 ~~~i~A~~~nGvL~I 142 (161)
..+=++.|++|||+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 345789999999987
Done!