RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 031365
         (161 letters)



>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 150

 Score =  136 bits (342), Expect = 3e-42
 Identities = 96/151 (63%), Positives = 113/151 (74%), Gaps = 4/151 (2%)

Query: 11  RRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAIVNARVDWKETPEAHVFKAD 70
           RRS+V +PF+    DPF  F           S    ET+A  NAR+DWKETPEAHVFKAD
Sbjct: 4   RRSNVFDPFADLWADPFDTFRSIVPAI----SGGGSETAAFANARMDWKETPEAHVFKAD 59

Query: 71  LPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 130
           LPG++KEEVKVEVED  VL +SG+R  EKEDKND WHRVERSSG F RRFRL E+ K+++
Sbjct: 60  LPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEE 119

Query: 131 IKASMESGVLTVTVPKVEVTKPDVKAIAISG 161
           +KA +E+GVLTVTVPK EV KP+VKAI ISG
Sbjct: 120 VKAGLENGVLTVTVPKAEVKKPEVKAIQISG 150


>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon
           Methanococcus jannaschii [TaxId: 2190]}
          Length = 115

 Score = 89.7 bits (222), Expect = 2e-24
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 56  VDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSGM 115
           +   E  +     A LPG+ KE++ +    D +   + +  +   +     +        
Sbjct: 13  ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEE 72

Query: 116 FSRRFRLPENVKMDQIKASMESGVLTVTVPKVEVTKPDVKAIAI 159
             R  +LP  VK +   A  E+GVL+V +PK E +    K I I
Sbjct: 73  IYRTIKLPATVKEENASAKFENGVLSVILPKAESSIK--KGINI 114


>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 92

 Score = 32.6 bits (74), Expect = 0.005
 Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 16/94 (17%)

Query: 55  RVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRKIEKEDKNDTWHRVERSSG 114
           + DW +T    V    +  ++K +V VE  +  +           +  +   + ++    
Sbjct: 4   KYDWYQTESQVVITLMIKNVQKNDVNVEFSEKEL-------SALVKLPSGEDYNLK---- 52

Query: 115 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 148
                  L   +  +Q    + S  + + + K E
Sbjct: 53  -----LELLHPIIPEQSTFKVLSTKIEIKLKKPE 81


>d2csoa1 a.4.5.31 (A:8-122) Pleckstrin {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 115

 Score = 24.5 bits (53), Expect = 3.8
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 3/30 (10%)

Query: 118 RRFRLPENVKMDQIKASM---ESGVLTVTV 144
           R  RLPE + +  +  SM   E G+  + +
Sbjct: 1   RSIRLPETIDLGALYLSMKDTEKGIKELNL 30


>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410
          {Thermotoga maritima [TaxId: 2336]}
          Length = 285

 Score = 25.0 bits (54), Expect = 5.2
 Identities = 7/22 (31%), Positives = 9/22 (40%)

Query: 18 PFSLDVWDPFRDFPFPSGYSPA 39
           F + V D  +D      YSP 
Sbjct: 26 GFEIAVIDYSKDGSESGEYSPE 47


>d2nlza1 d.153.1.6 (A:3-539) Cephalosporin acylase {Bacillus
          halodurans [TaxId: 86665]}
          Length = 537

 Score = 24.8 bits (53), Expect = 5.8
 Identities = 5/20 (25%), Positives = 11/20 (55%), Gaps = 1/20 (5%)

Query: 24 WDPFRDFPFPSGYSPALSSQ 43
          +DP + +P+PS  +   +  
Sbjct: 3  FDP-QSYPYPSRRNVVYAKN 21


>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase
           {Clostridium thermocellum [TaxId: 1515]}
          Length = 131

 Score = 24.1 bits (52), Expect = 6.2
 Identities = 15/114 (13%), Positives = 36/114 (31%), Gaps = 12/114 (10%)

Query: 37  SPALSSQFPPETSAIVNARVDWKETPEAHVFKADLPGLRKEEVKVEVEDDRVLQISGQRK 96
           SP   +    + + I +  +  +E  E  +F  +        +  +V   +  ++     
Sbjct: 25  SPLHDTSKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIV 84

Query: 97  IEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPKVEVT 150
           +E +D                      E    +  K+S + G+LT  + +    
Sbjct: 85  LEHQDLKIR------------NSVNGEEVYPKNSDKSSFDDGILTSMLRRASWN 126


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.315    0.132    0.387 

Gapped
Lambda     K      H
   0.267   0.0463    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 610,263
Number of extensions: 27869
Number of successful extensions: 53
Number of sequences better than 10.0: 1
Number of HSP's gapped: 52
Number of HSP's successfully gapped: 7
Length of query: 161
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 83
Effective length of database: 1,336,656
Effective search space: 110942448
Effective search space used: 110942448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.3 bits)