Query 031374
Match_columns 160
No_of_seqs 223 out of 1272
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 21:13:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031374.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031374hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 2E-46 6.8E-51 296.1 19.7 157 2-158 13-169 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 2E-32 6.8E-37 214.1 8.7 147 8-158 6-164 (179)
3 1v70_A Probable antibiotics sy 99.3 1.2E-11 4.1E-16 84.5 8.5 64 85-153 40-104 (105)
4 2b8m_A Hypothetical protein MJ 99.3 1.3E-11 4.6E-16 87.4 8.7 67 85-156 39-106 (117)
5 3h8u_A Uncharacterized conserv 99.3 1.7E-11 5.8E-16 87.7 8.2 63 85-152 51-115 (125)
6 4i4a_A Similar to unknown prot 99.2 3.7E-11 1.3E-15 86.1 8.4 60 85-149 46-105 (128)
7 3fjs_A Uncharacterized protein 99.2 3.4E-11 1.1E-15 86.1 8.0 62 84-150 47-108 (114)
8 2gu9_A Tetracenomycin polyketi 99.2 6.1E-11 2.1E-15 82.4 8.6 62 86-152 34-98 (113)
9 2ozj_A Cupin 2, conserved barr 99.2 3.5E-11 1.2E-15 84.9 7.2 52 85-141 50-101 (114)
10 4e2g_A Cupin 2 conserved barre 99.2 5.4E-11 1.8E-15 85.0 8.2 62 85-152 53-114 (126)
11 2f4p_A Hypothetical protein TM 99.2 9.3E-11 3.2E-15 87.3 9.5 68 86-158 61-133 (147)
12 3ht1_A REMF protein; cupin fol 99.2 5.9E-11 2E-15 86.3 7.9 64 85-153 51-116 (145)
13 1vj2_A Novel manganese-contain 99.2 5.6E-11 1.9E-15 85.8 7.7 62 86-152 61-122 (126)
14 3kgz_A Cupin 2 conserved barre 99.2 9E-11 3.1E-15 88.9 9.0 64 85-153 56-119 (156)
15 1yhf_A Hypothetical protein SP 99.2 9.9E-11 3.4E-15 82.3 8.4 58 85-149 52-109 (115)
16 2pfw_A Cupin 2, conserved barr 99.2 1.1E-10 3.7E-15 82.2 8.3 60 86-152 47-106 (116)
17 3ibm_A Cupin 2, conserved barr 99.2 1.2E-10 4.1E-15 88.8 9.0 64 84-152 67-131 (167)
18 1x82_A Glucose-6-phosphate iso 99.2 2.3E-10 7.9E-15 88.9 10.7 67 86-152 86-155 (190)
19 1lr5_A Auxin binding protein 1 99.2 1.2E-10 4.2E-15 87.4 8.9 68 86-153 54-126 (163)
20 3jzv_A Uncharacterized protein 99.1 1.3E-10 4.4E-15 89.0 8.7 63 85-152 65-127 (166)
21 3l2h_A Putative sugar phosphat 99.1 1.6E-10 5.5E-15 86.6 8.5 63 86-153 60-124 (162)
22 2o8q_A Hypothetical protein; c 99.1 1.6E-10 5.6E-15 83.6 7.9 60 86-151 56-117 (134)
23 2q30_A Uncharacterized protein 99.1 2.1E-10 7.2E-15 79.5 8.0 64 84-154 44-110 (110)
24 2oa2_A BH2720 protein; 1017534 99.1 2.8E-10 9.5E-15 84.4 8.8 68 85-152 55-124 (148)
25 3d82_A Cupin 2, conserved barr 99.1 9.8E-11 3.4E-15 80.2 5.9 50 86-140 42-92 (102)
26 3i7d_A Sugar phosphate isomera 99.1 4.3E-10 1.5E-14 85.2 9.6 75 65-153 45-122 (163)
27 1fi2_A Oxalate oxidase, germin 99.1 1E-09 3.5E-14 85.7 10.5 68 85-152 84-155 (201)
28 2i45_A Hypothetical protein; n 99.1 3E-10 1E-14 79.3 6.7 54 87-147 41-96 (107)
29 1o4t_A Putative oxalate decarb 99.1 5.8E-10 2E-14 81.4 8.3 59 86-149 70-129 (133)
30 3cew_A Uncharacterized cupin p 99.0 7.4E-10 2.5E-14 79.3 8.4 57 88-149 42-99 (125)
31 3lwc_A Uncharacterized protein 99.0 6E-10 2E-14 80.7 7.6 64 86-158 53-116 (119)
32 4b29_A Dimethylsulfoniopropion 99.0 7.3E-10 2.5E-14 88.5 8.7 66 83-154 142-208 (217)
33 2fqp_A Hypothetical protein BP 99.0 6.7E-10 2.3E-14 76.7 7.2 59 86-149 31-92 (97)
34 2opk_A Hypothetical protein; p 99.0 7.1E-10 2.4E-14 79.0 7.6 59 88-151 48-109 (112)
35 2bnm_A Epoxidase; oxidoreducta 99.0 1.1E-09 3.8E-14 84.1 8.9 58 88-150 135-197 (198)
36 1sef_A Conserved hypothetical 99.0 1.4E-09 4.9E-14 88.5 9.2 59 86-149 195-255 (274)
37 3rns_A Cupin 2 conserved barre 99.0 1.1E-09 3.8E-14 86.9 8.2 62 83-151 47-108 (227)
38 4h7l_A Uncharacterized protein 99.0 8.4E-10 2.9E-14 84.3 7.1 57 86-151 58-117 (157)
39 3h7j_A Bacilysin biosynthesis 99.0 1.1E-09 3.9E-14 87.5 7.8 63 85-152 158-220 (243)
40 1y9q_A Transcriptional regulat 99.0 1.6E-09 5.6E-14 83.0 7.8 58 88-151 121-178 (192)
41 3rns_A Cupin 2 conserved barre 99.0 1.8E-09 6.3E-14 85.6 8.3 61 84-150 164-224 (227)
42 1o5u_A Novel thermotoga mariti 99.0 1.4E-09 4.8E-14 76.8 6.8 47 88-140 45-92 (101)
43 2vqa_A SLL1358 protein, MNCA; 98.9 4.9E-09 1.7E-13 87.6 10.6 68 85-152 64-132 (361)
44 1fxz_A Glycinin G1; proglycini 98.9 1.1E-08 3.6E-13 90.1 11.8 67 83-150 348-416 (476)
45 2arc_A ARAC, arabinose operon 98.9 5.2E-09 1.8E-13 76.8 8.2 49 87-140 32-80 (164)
46 4e2q_A Ureidoglycine aminohydr 98.9 7.7E-09 2.6E-13 84.9 9.8 68 65-147 188-256 (266)
47 2d40_A Z3393, putative gentisa 98.9 2.3E-09 8E-14 90.7 6.9 61 84-149 111-172 (354)
48 2vqa_A SLL1358 protein, MNCA; 98.9 9.9E-09 3.4E-13 85.7 10.6 68 85-152 246-314 (361)
49 1j58_A YVRK protein; cupin, de 98.9 5.3E-09 1.8E-13 88.3 9.0 67 85-152 91-157 (385)
50 1dgw_A Canavalin; duplicated s 98.9 6.3E-09 2.1E-13 80.0 8.5 75 65-150 43-118 (178)
51 3nw4_A Gentisate 1,2-dioxygena 98.9 3.4E-09 1.2E-13 90.6 7.6 61 83-148 113-174 (368)
52 1y3t_A Hypothetical protein YX 98.9 6.2E-09 2.1E-13 85.6 8.9 63 84-152 229-292 (337)
53 1y3t_A Hypothetical protein YX 98.9 6.9E-09 2.4E-13 85.3 8.9 61 85-151 58-119 (337)
54 3c3v_A Arachin ARAH3 isoform; 98.9 1.4E-08 4.9E-13 90.0 11.3 68 83-151 382-451 (510)
55 3bu7_A Gentisate 1,2-dioxygena 98.9 7.5E-09 2.6E-13 89.2 8.9 62 83-149 304-366 (394)
56 2d5f_A Glycinin A3B4 subunit; 98.8 1.5E-08 5.1E-13 89.5 10.7 71 83-154 377-450 (493)
57 1rc6_A Hypothetical protein YL 98.8 7.6E-09 2.6E-13 83.4 7.9 59 86-149 192-252 (261)
58 1yfu_A 3-hydroxyanthranilate-3 98.8 1.2E-08 4.1E-13 78.9 8.6 56 84-140 46-101 (174)
59 2cav_A Protein (canavalin); vi 98.8 1.5E-08 5.1E-13 88.5 9.9 77 65-152 88-165 (445)
60 1j58_A YVRK protein; cupin, de 98.8 1.5E-08 5E-13 85.6 9.5 68 85-152 269-337 (385)
61 2vpv_A Protein MIF2, MIF2P; nu 98.8 2.9E-08 1E-12 76.3 10.1 56 87-147 104-159 (166)
62 3bu7_A Gentisate 1,2-dioxygena 98.8 1.1E-08 3.6E-13 88.2 8.5 61 83-148 133-195 (394)
63 3h7j_A Bacilysin biosynthesis 98.8 9.6E-09 3.3E-13 82.1 7.7 60 85-149 46-106 (243)
64 1sfn_A Conserved hypothetical 98.8 2.2E-08 7.5E-13 80.4 9.4 70 64-147 166-235 (246)
65 4axo_A EUTQ, ethanolamine util 98.8 1.5E-08 5E-13 76.9 7.6 52 91-149 82-133 (151)
66 2xlg_A SLL1785 protein, CUCA; 98.8 8.9E-09 3E-13 83.2 6.8 65 86-150 56-137 (239)
67 1uij_A Beta subunit of beta co 98.8 3.5E-08 1.2E-12 85.4 10.9 77 64-151 50-127 (416)
68 2ea7_A 7S globulin-1; beta bar 98.8 3.7E-08 1.3E-12 85.7 11.0 77 64-151 62-139 (434)
69 3es1_A Cupin 2, conserved barr 98.8 1.4E-08 5E-13 78.3 7.2 73 64-152 80-153 (172)
70 1sq4_A GLXB, glyoxylate-induce 98.8 1.9E-08 6.5E-13 82.4 8.2 59 87-150 84-142 (278)
71 1juh_A Quercetin 2,3-dioxygena 98.7 2.7E-08 9.3E-13 83.9 8.3 63 88-151 65-128 (350)
72 1juh_A Quercetin 2,3-dioxygena 98.7 5.8E-08 2E-12 81.8 10.3 63 83-151 262-325 (350)
73 1fxz_A Glycinin G1; proglycini 98.7 4E-08 1.4E-12 86.5 8.9 80 61-151 47-148 (476)
74 2pyt_A Ethanolamine utilizatio 98.7 4.7E-08 1.6E-12 72.0 7.6 52 92-150 74-125 (133)
75 3bcw_A Uncharacterized protein 98.7 3E-08 1E-12 72.3 6.0 48 88-140 63-111 (123)
76 2e9q_A 11S globulin subunit be 98.7 5.7E-08 2E-12 85.1 8.6 81 61-152 62-163 (459)
77 2d5f_A Glycinin A3B4 subunit; 98.7 6.7E-08 2.3E-12 85.4 9.1 81 60-151 43-148 (493)
78 1sq4_A GLXB, glyoxylate-induce 98.7 6.7E-08 2.3E-12 79.1 8.4 70 65-149 193-263 (278)
79 3fz3_A Prunin; TREE NUT allerg 98.7 1.2E-07 4.3E-12 84.2 10.7 68 83-151 404-473 (531)
80 3d0j_A Uncharacterized protein 98.6 8E-08 2.7E-12 71.9 7.6 62 83-144 39-104 (140)
81 1zvf_A 3-hydroxyanthranilate 3 98.6 1.7E-07 5.7E-12 72.5 9.6 58 84-141 45-105 (176)
82 2d40_A Z3393, putative gentisa 98.6 6.9E-08 2.4E-12 81.7 7.9 59 84-149 279-337 (354)
83 2e9q_A 11S globulin subunit be 98.6 1.9E-07 6.6E-12 81.8 10.6 69 83-152 332-402 (459)
84 2phl_A Phaseolin; plant SEED s 98.6 1E-07 3.6E-12 82.1 8.5 77 64-151 53-136 (397)
85 2phl_A Phaseolin; plant SEED s 98.6 2.4E-07 8.4E-12 79.8 10.6 68 83-152 249-324 (397)
86 3c3v_A Arachin ARAH3 isoform; 98.6 1.4E-07 4.8E-12 83.6 9.0 82 60-152 46-162 (510)
87 3qac_A 11S globulin SEED stora 98.6 1.3E-07 4.4E-12 83.0 8.6 81 61-152 49-166 (465)
88 1uij_A Beta subunit of beta co 98.6 2.8E-07 9.4E-12 79.7 10.5 67 84-152 260-341 (416)
89 3lag_A Uncharacterized protein 98.6 5.1E-08 1.7E-12 68.1 4.7 63 85-149 29-92 (98)
90 3ksc_A LEGA class, prolegumin; 98.5 8.4E-07 2.9E-11 78.4 12.4 69 83-152 368-438 (496)
91 3kgl_A Cruciferin; 11S SEED gl 98.5 5.4E-07 1.8E-11 79.1 10.7 70 83-153 333-404 (466)
92 1rc6_A Hypothetical protein YL 98.5 2.5E-07 8.5E-12 74.5 7.8 55 91-150 79-133 (261)
93 3ksc_A LEGA class, prolegumin; 98.5 4.2E-07 1.5E-11 80.3 9.2 82 60-152 44-146 (496)
94 2ea7_A 7S globulin-1; beta bar 98.5 5.2E-07 1.8E-11 78.4 9.6 67 84-152 277-357 (434)
95 3qac_A 11S globulin SEED stora 98.5 9.5E-07 3.3E-11 77.5 10.6 86 66-152 306-403 (465)
96 2o1q_A Putative acetyl/propion 98.5 8.9E-08 3E-12 71.3 3.4 74 65-152 46-119 (145)
97 1sef_A Conserved hypothetical 98.5 4.3E-07 1.5E-11 73.7 7.8 54 91-149 82-135 (274)
98 2ozi_A Hypothetical protein RP 98.4 2.1E-07 7.1E-12 65.2 4.4 62 86-149 30-92 (98)
99 3nw4_A Gentisate 1,2-dioxygena 98.4 8.6E-07 2.9E-11 75.7 8.6 53 83-140 289-341 (368)
100 3s7i_A Allergen ARA H 1, clone 98.4 1.5E-06 5.1E-11 75.3 9.7 66 84-151 274-365 (418)
101 4e2q_A Ureidoglycine aminohydr 98.4 6.6E-07 2.3E-11 73.4 6.6 66 65-147 72-138 (266)
102 2cav_A Protein (canavalin); vi 98.3 3.2E-06 1.1E-10 73.7 10.7 68 83-152 291-370 (445)
103 3kgl_A Cruciferin; 11S SEED gl 98.3 2.7E-06 9.1E-11 74.7 8.6 81 61-152 42-181 (466)
104 3gbg_A TCP pilus virulence reg 98.3 1.8E-06 6.1E-11 68.9 6.9 53 84-139 20-72 (276)
105 2qnk_A 3-hydroxyanthranilate 3 98.3 4.2E-06 1.4E-10 69.0 9.2 57 85-143 43-100 (286)
106 2q1z_B Anti-sigma factor CHRR, 98.2 2.3E-06 7.8E-11 66.7 6.5 58 83-149 135-192 (195)
107 3s7i_A Allergen ARA H 1, clone 98.2 6.6E-06 2.3E-10 71.3 9.4 64 84-148 55-119 (418)
108 1sfn_A Conserved hypothetical 98.1 4.2E-06 1.4E-10 67.0 6.7 42 93-139 68-109 (246)
109 3ebr_A Uncharacterized RMLC-li 98.1 4.6E-06 1.6E-10 63.3 5.9 68 64-148 43-112 (159)
110 2y0o_A Probable D-lyxose ketol 98.0 8E-06 2.7E-10 63.2 6.1 59 83-141 63-144 (175)
111 3es4_A Uncharacterized protein 98.0 1.9E-05 6.4E-10 57.3 7.5 49 88-140 56-104 (116)
112 3cjx_A Protein of unknown func 97.9 1.3E-05 4.6E-10 61.1 5.1 60 65-140 45-104 (165)
113 3myx_A Uncharacterized protein 97.9 4.7E-05 1.6E-09 61.4 8.1 53 91-148 63-115 (238)
114 3st7_A Capsular polysaccharide 97.9 7.7E-05 2.6E-09 61.5 9.6 69 83-151 282-354 (369)
115 3fz3_A Prunin; TREE NUT allerg 97.8 3.8E-05 1.3E-09 68.3 8.0 33 118-150 174-206 (531)
116 3o14_A Anti-ecfsigma factor, C 97.6 0.00011 3.7E-09 58.5 6.8 55 66-139 46-100 (223)
117 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.3 0.002 6.9E-08 47.9 9.2 58 84-142 46-105 (141)
118 3bal_A Acetylacetone-cleaving 97.2 0.00033 1.1E-08 52.9 4.5 61 64-137 47-107 (153)
119 3myx_A Uncharacterized protein 97.2 0.0011 3.8E-08 53.3 7.4 46 91-140 184-229 (238)
120 3ejk_A DTDP sugar isomerase; Y 96.9 0.0094 3.2E-07 45.7 10.3 67 83-149 63-139 (174)
121 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0053 1.8E-07 48.0 8.8 60 83-142 70-135 (197)
122 2qnk_A 3-hydroxyanthranilate 3 96.8 0.004 1.4E-07 51.3 7.8 49 94-149 227-275 (286)
123 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.8 0.0073 2.5E-07 46.7 8.9 60 83-142 58-128 (185)
124 3ryk_A DTDP-4-dehydrorhamnose 96.7 0.0064 2.2E-07 47.9 8.2 60 83-142 80-151 (205)
125 2ixk_A DTDP-4-dehydrorhamnose 96.7 0.01 3.5E-07 45.8 8.9 60 83-142 59-129 (184)
126 1dzr_A DTDP-4-dehydrorhamnose 96.5 0.015 5.1E-07 44.9 8.9 60 83-142 57-128 (183)
127 1eyb_A Homogentisate 1,2-dioxy 96.3 0.0085 2.9E-07 52.4 7.2 57 91-152 176-232 (471)
128 1oi6_A PCZA361.16; epimerase, 96.2 0.03 1E-06 44.0 9.3 60 83-142 57-128 (205)
129 2vec_A YHAK, pirin-like protei 96.2 0.022 7.6E-07 46.0 8.6 65 85-153 76-144 (256)
130 1yud_A Hypothetical protein SO 96.2 0.039 1.3E-06 42.2 9.4 60 84-143 60-126 (170)
131 2c0z_A NOVW; isomerase, epimer 96.2 0.03 1E-06 44.3 9.0 60 83-142 65-136 (216)
132 1wlt_A 176AA long hypothetical 96.1 0.03 1E-06 43.7 8.6 60 83-142 75-146 (196)
133 3bb6_A Uncharacterized protein 96.0 0.095 3.2E-06 38.3 10.3 70 83-152 24-101 (127)
134 1upi_A DTDP-4-dehydrorhamnose 96.0 0.044 1.5E-06 43.6 9.2 60 83-142 76-147 (225)
135 1tq5_A Protein YHHW; bicupin, 96.0 0.037 1.3E-06 44.3 8.8 66 85-155 53-122 (242)
136 2gm6_A Cysteine dioxygenase ty 95.8 0.046 1.6E-06 42.7 8.7 70 83-152 89-167 (208)
137 3eqe_A Putative cystein deoxyg 95.6 0.083 2.8E-06 40.1 9.2 69 84-152 80-153 (171)
138 3kmh_A D-lyxose isomerase; cup 95.4 0.048 1.6E-06 43.9 7.5 59 83-141 116-197 (246)
139 4hn1_A Putative 3-epimerase in 95.4 0.095 3.2E-06 41.0 8.9 60 83-142 54-125 (201)
140 4gjz_A Lysine-specific demethy 95.1 0.062 2.1E-06 41.0 7.0 53 88-140 139-225 (235)
141 3o14_A Anti-ecfsigma factor, C 94.9 0.032 1.1E-06 44.1 4.8 49 84-142 157-205 (223)
142 1vrb_A Putative asparaginyl hy 94.8 0.16 5.6E-06 42.3 9.2 71 84-156 152-256 (342)
143 2qjv_A Uncharacterized IOLB-li 94.8 0.066 2.2E-06 43.8 6.6 54 85-141 167-236 (270)
144 4diq_A Lysine-specific demethy 94.3 0.66 2.3E-05 40.8 12.4 64 86-149 178-261 (489)
145 2p17_A Pirin-like protein; GK1 94.3 0.15 5E-06 41.5 7.7 66 85-154 51-119 (277)
146 1qwr_A Mannose-6-phosphate iso 94.1 0.06 2E-06 44.6 5.0 22 117-138 159-180 (319)
147 2xdv_A MYC-induced nuclear ant 94.1 0.27 9.4E-06 42.5 9.3 55 86-140 153-223 (442)
148 3d8c_A Hypoxia-inducible facto 94.0 0.33 1.1E-05 40.4 9.4 66 86-151 196-297 (349)
149 1dgw_X Canavalin; duplicated s 92.9 0.077 2.6E-06 35.4 3.1 28 84-111 47-75 (79)
150 3al5_A HTYW5, JMJC domain-cont 92.7 0.25 8.6E-06 40.9 6.7 66 87-154 181-277 (338)
151 1j1l_A Pirin; beta sandwich, c 92.3 0.39 1.3E-05 39.3 7.2 64 86-153 53-120 (290)
152 1qwr_A Mannose-6-phosphate iso 92.1 0.49 1.7E-05 39.1 7.6 37 92-133 268-304 (319)
153 2oyz_A UPF0345 protein VPA0057 91.7 0.58 2E-05 32.3 6.4 46 93-141 41-86 (94)
154 3dl3_A Tellurite resistance pr 91.6 0.78 2.7E-05 33.0 7.3 58 94-152 39-99 (119)
155 1zx5_A Mannosephosphate isomer 91.4 0.53 1.8E-05 38.6 7.1 51 92-151 246-298 (300)
156 2wfp_A Mannose-6-phosphate iso 90.9 0.6 2.1E-05 39.7 7.2 54 90-151 339-392 (394)
157 1zx5_A Mannosephosphate isomer 90.9 0.12 4.2E-06 42.4 2.8 47 93-139 117-181 (300)
158 3eln_A Cysteine dioxygenase ty 90.4 3.2 0.00011 31.9 10.4 70 83-152 80-159 (200)
159 2rg4_A Uncharacterized protein 89.3 0.71 2.4E-05 35.9 5.8 57 82-138 112-191 (216)
160 2wfp_A Mannose-6-phosphate iso 88.6 0.3 1E-05 41.6 3.5 23 117-139 241-263 (394)
161 3k2o_A Bifunctional arginine d 88.5 0.78 2.7E-05 38.2 5.9 27 115-141 255-281 (336)
162 1pmi_A PMI, phosphomannose iso 87.9 1.5 5.1E-05 37.9 7.4 58 91-151 377-438 (440)
163 1dgw_Y Canavalin; duplicated s 87.7 1.6 5.4E-05 29.9 6.0 35 116-152 6-40 (93)
164 3hqx_A UPF0345 protein aciad03 87.3 2 7E-05 30.4 6.6 51 88-141 51-102 (111)
165 3eo6_A Protein of unknown func 87.1 1 3.6E-05 31.7 4.9 49 88-139 48-97 (106)
166 2qdr_A Uncharacterized protein 86.4 1.2 4E-05 36.5 5.5 52 89-156 234-292 (303)
167 3uss_A Putative uncharacterize 86.4 8.6 0.00029 29.9 10.4 71 83-153 83-162 (211)
168 3kv4_A PHD finger protein 8; e 85.7 1.2 4.3E-05 38.6 5.7 47 95-141 255-326 (447)
169 2ypd_A Probable JMJC domain-co 85.7 0.92 3.2E-05 38.8 4.8 37 116-153 293-330 (392)
170 1ywk_A 4-deoxy-L-threo-5-hexos 85.6 2 6.9E-05 35.3 6.7 51 85-135 195-249 (289)
171 1xru_A 4-deoxy-L-threo-5-hexos 85.4 3.1 0.0001 34.1 7.6 57 85-143 195-256 (282)
172 2xxz_A Lysine-specific demethy 84.4 1.5 5E-05 36.8 5.3 41 115-157 278-318 (332)
173 3k3o_A PHF8, PHD finger protei 84.4 0.98 3.4E-05 38.3 4.4 54 86-139 160-240 (371)
174 2yu1_A JMJC domain-containing 84.3 1.5 5.1E-05 38.1 5.6 57 85-141 208-291 (451)
175 1pmi_A PMI, phosphomannose iso 84.1 0.62 2.1E-05 40.3 3.1 23 117-139 267-289 (440)
176 3pua_A GRC5, PHD finger protei 83.8 1.1 3.7E-05 38.4 4.4 54 86-139 187-267 (392)
177 2pqq_A Putative transcriptiona 83.1 3.8 0.00013 27.8 6.4 58 93-150 46-107 (149)
178 3pur_A Lysine-specific demethy 81.1 1.3 4.5E-05 39.3 4.0 56 84-139 307-389 (528)
179 3kv5_D JMJC domain-containing 81.0 1.3 4.5E-05 38.7 4.0 55 85-139 278-359 (488)
180 3kv9_A JMJC domain-containing 79.3 1.9 6.6E-05 36.9 4.4 56 84-139 186-268 (397)
181 3mdp_A Cyclic nucleotide-bindi 77.9 4.1 0.00014 27.4 5.1 57 93-149 47-110 (142)
182 2fmy_A COOA, carbon monoxide o 77.5 8.8 0.0003 28.2 7.2 53 93-149 45-97 (220)
183 3dv8_A Transcriptional regulat 76.6 9.7 0.00033 27.7 7.2 57 93-149 44-106 (220)
184 3loi_A Putative uncharacterize 76.6 21 0.00073 26.9 9.1 54 85-138 65-126 (172)
185 3dn7_A Cyclic nucleotide bindi 75.5 5.8 0.0002 28.5 5.6 57 93-149 48-109 (194)
186 3iwz_A CAP-like, catabolite ac 75.2 9.3 0.00032 28.0 6.8 57 93-149 52-113 (230)
187 1ft9_A Carbon monoxide oxidati 75.2 9.2 0.00031 28.2 6.8 53 93-149 41-93 (222)
188 3idb_B CAMP-dependent protein 75.1 10 0.00035 26.4 6.7 56 93-149 79-138 (161)
189 3b02_A Transcriptional regulat 74.8 8.3 0.00028 27.8 6.3 57 93-149 17-76 (195)
190 3ryp_A Catabolite gene activat 74.5 9.9 0.00034 27.4 6.7 57 93-149 37-98 (210)
191 3avr_A Lysine-specific demethy 73.9 5.5 0.00019 35.3 5.9 40 115-156 337-376 (531)
192 2qjv_A Uncharacterized IOLB-li 72.3 25 0.00087 28.3 9.1 68 59-141 25-102 (270)
193 1yll_A PA5104, conserved hypot 71.7 5.2 0.00018 30.9 4.7 56 91-151 138-197 (200)
194 4ask_A Lysine-specific demethy 71.3 3.8 0.00013 36.2 4.1 26 115-140 312-337 (510)
195 3kcc_A Catabolite gene activat 70.8 13 0.00044 28.4 6.8 57 93-149 87-148 (260)
196 2opw_A Phyhd1 protein; double- 70.1 6 0.0002 31.0 4.8 44 114-157 226-273 (291)
197 1o5l_A Transcriptional regulat 69.6 8.9 0.0003 28.2 5.5 57 93-149 40-101 (213)
198 3d0s_A Transcriptional regulat 69.5 11 0.00038 27.7 6.0 57 93-149 47-107 (227)
199 2qdr_A Uncharacterized protein 68.7 3.7 0.00012 33.6 3.3 39 87-135 105-144 (303)
200 2oz6_A Virulence factor regula 67.6 19 0.00064 25.8 6.9 57 93-149 31-95 (207)
201 3e6c_C CPRK, cyclic nucleotide 66.0 24 0.0008 26.4 7.4 56 93-149 50-107 (250)
202 2bgc_A PRFA; bacterial infecti 66.0 32 0.0011 25.5 8.1 55 93-149 36-98 (238)
203 2a1x_A Phytanoyl-COA dioxygena 65.9 6.1 0.00021 31.4 4.1 41 113-153 213-256 (308)
204 2rdq_A 1-deoxypentalenic acid 65.2 6.2 0.00021 30.8 4.0 40 113-152 208-253 (288)
205 4ev0_A Transcription regulator 64.5 13 0.00046 26.8 5.6 57 93-149 40-100 (216)
206 1zyb_A Transcription regulator 64.4 14 0.00046 27.5 5.7 87 49-149 30-122 (232)
207 1uhe_A Aspartate 1-decarboxyla 64.0 1 3.5E-05 31.3 -0.7 30 97-130 32-63 (97)
208 3gyd_A CNMP-BD protein, cyclic 63.7 9.1 0.00031 27.7 4.4 57 93-149 80-140 (187)
209 3fx3_A Cyclic nucleotide-bindi 63.2 14 0.00048 27.3 5.5 57 93-149 52-112 (237)
210 3e97_A Transcriptional regulat 63.0 19 0.00066 26.4 6.3 57 93-149 47-107 (231)
211 2zcw_A TTHA1359, transcription 61.4 17 0.00059 26.2 5.7 56 94-149 26-84 (202)
212 2fct_A Syringomycin biosynthes 60.2 6.4 0.00022 31.3 3.2 28 113-140 217-244 (313)
213 1xe7_A YML079WP, hypothetical 60.0 55 0.0019 25.3 8.5 53 87-139 94-152 (203)
214 2ptm_A Hyperpolarization-activ 59.3 11 0.00039 27.2 4.3 54 93-149 112-168 (198)
215 2z69_A DNR protein; beta barre 59.0 9.9 0.00034 25.8 3.7 57 93-149 53-114 (154)
216 2d93_A RAP guanine nucleotide 58.4 17 0.00058 24.3 4.8 53 93-149 58-114 (134)
217 4ava_A Lysine acetyltransferas 56.4 21 0.0007 28.0 5.7 57 93-149 54-113 (333)
218 3la7_A Global nitrogen regulat 55.9 24 0.00082 26.4 5.8 34 93-126 61-95 (243)
219 3bpz_A Potassium/sodium hyperp 55.2 9.3 0.00032 27.9 3.2 53 93-149 113-168 (202)
220 3pna_A CAMP-dependent protein 55.0 14 0.00049 25.4 4.1 53 93-149 79-134 (154)
221 3dxt_A JMJC domain-containing 54.0 25 0.00087 29.5 6.0 42 114-157 260-301 (354)
222 2gau_A Transcriptional regulat 51.3 15 0.00052 27.0 3.9 57 93-149 51-111 (232)
223 3oug_A Aspartate 1-decarboxyla 51.1 3.6 0.00012 29.3 0.2 30 97-130 60-92 (114)
224 3g7d_A PHPD; non heme Fe(II) d 50.4 53 0.0018 27.8 7.3 50 97-149 358-407 (443)
225 3m3i_A Putative uncharacterize 50.4 77 0.0026 24.9 7.9 55 86-140 73-162 (225)
226 3gja_A CYTC3; halogenase, beta 47.6 7.3 0.00025 31.6 1.6 28 113-140 219-246 (319)
227 1e5r_A Proline oxidase; oxidor 47.5 21 0.00072 29.1 4.4 51 102-157 131-183 (290)
228 3i3q_A Alpha-ketoglutarate-dep 47.4 24 0.00083 27.1 4.6 39 98-136 136-176 (211)
229 1ywk_A 4-deoxy-L-threo-5-hexos 46.6 57 0.0019 26.6 6.8 41 93-138 79-120 (289)
230 2qcs_B CAMP-dependent protein 46.4 47 0.0016 25.2 6.1 34 93-126 198-233 (291)
231 1o7f_A CAMP-dependent RAP1 gua 46.3 44 0.0015 27.5 6.4 57 93-149 83-144 (469)
232 2ox0_A JMJC domain-containing 45.7 31 0.0011 29.2 5.3 36 114-149 278-313 (381)
233 1xru_A 4-deoxy-L-threo-5-hexos 45.4 24 0.00084 28.7 4.4 41 94-139 80-121 (282)
234 3opt_A DNA damage-responsive t 44.4 44 0.0015 28.2 6.0 42 114-157 303-344 (373)
235 1pqh_A Aspartate 1-decarboxyla 43.4 4 0.00014 30.1 -0.5 30 97-130 74-106 (143)
236 3ocp_A PRKG1 protein; serine/t 42.5 31 0.001 23.1 4.1 53 93-149 64-119 (139)
237 4f8a_A Potassium voltage-gated 42.1 76 0.0026 21.3 7.2 53 93-149 68-125 (160)
238 1wgp_A Probable cyclic nucleot 41.9 5.9 0.0002 26.6 0.2 33 93-126 47-82 (137)
239 3r8s_R 50S ribosomal protein L 41.6 20 0.0007 24.7 3.0 21 105-130 4-24 (103)
240 2p17_A Pirin-like protein; GK1 41.1 52 0.0018 26.2 5.8 51 94-154 189-244 (277)
241 1vc3_B L-aspartate-alpha-decar 41.0 3.2 0.00011 28.7 -1.3 30 97-130 33-65 (96)
242 3tht_A Alkylated DNA repair pr 40.9 17 0.00059 30.2 2.9 35 100-134 230-264 (345)
243 3shr_A CGMP-dependent protein 40.4 79 0.0027 24.0 6.7 57 93-149 198-259 (299)
244 3v2d_V 50S ribosomal protein L 39.9 24 0.00083 24.3 3.1 22 104-130 3-24 (101)
245 3emr_A ECTD; double stranded b 39.9 7.7 0.00026 31.3 0.6 37 115-151 229-268 (310)
246 3plx_B Aspartate 1-decarboxyla 39.6 3.7 0.00013 28.7 -1.2 31 97-131 33-65 (102)
247 3ukn_A Novel protein similar t 39.5 75 0.0026 22.9 6.1 53 93-149 116-173 (212)
248 2vec_A YHAK, pirin-like protei 38.0 83 0.0028 24.8 6.5 42 95-140 204-245 (256)
249 3dkw_A DNR protein; CRP-FNR, H 37.1 11 0.00038 27.5 1.1 57 93-149 50-111 (227)
250 2inu_A Insulin fructotransfera 36.4 18 0.0006 31.1 2.3 15 120-134 54-68 (410)
251 1znp_A Hypothetical protein AT 36.2 1.3E+02 0.0044 22.2 9.0 56 84-139 51-114 (154)
252 2qcs_B CAMP-dependent protein 35.9 54 0.0018 24.8 5.0 53 93-149 80-135 (291)
253 1tq5_A Protein YHHW; bicupin, 35.7 86 0.0029 24.4 6.2 37 95-140 183-219 (242)
254 3of1_A CAMP-dependent protein 34.6 52 0.0018 24.0 4.5 53 93-149 166-222 (246)
255 1vp6_A CNBD, cyclic-nucleotide 34.5 35 0.0012 22.6 3.3 51 93-149 52-105 (138)
256 1s4c_A Protein HI0227; double- 34.5 57 0.002 23.4 4.6 52 88-139 62-135 (155)
257 3tnp_B CAMP-dependent protein 33.8 1.2E+02 0.0041 25.0 7.1 57 93-149 186-245 (416)
258 3of1_A CAMP-dependent protein 33.5 38 0.0013 24.7 3.6 53 93-149 48-103 (246)
259 1we3_O CPN10(groes); chaperoni 33.2 36 0.0012 23.4 3.1 39 102-143 49-87 (100)
260 2fi9_A Outer membrane protein; 32.6 20 0.00068 25.4 1.8 27 102-136 22-48 (128)
261 2qfe_A Calpain-7; C2-like doma 32.4 26 0.00089 25.3 2.4 34 117-155 109-142 (148)
262 2c45_A Aspartate 1-decarboxyla 32.2 6.3 0.00021 28.9 -1.0 31 97-131 57-90 (139)
263 3ef4_A Pseudoazurin, blue copp 31.6 1.2E+02 0.0041 21.1 5.8 41 94-139 3-46 (124)
264 2iuw_A Alkylated repair protei 30.8 56 0.0019 25.3 4.3 36 98-133 159-204 (238)
265 2fvt_A Conserved hypothetical 30.0 20 0.00068 25.8 1.4 27 102-136 20-46 (135)
266 1pcq_O Groes protein; chaperon 29.6 41 0.0014 22.9 2.9 39 101-142 43-82 (97)
267 2cyj_A Hypothetical protein PH 28.2 22 0.00075 24.9 1.4 24 102-133 7-30 (118)
268 1l7l_A PA-I galactophilic lect 27.9 42 0.0014 23.7 2.7 27 104-130 4-30 (121)
269 1ihn_A Hypothetical protein MT 27.4 26 0.00088 24.4 1.6 24 102-133 8-31 (113)
270 1aba_A Glutaredoxin; electron 27.2 1.1E+02 0.0038 18.8 4.7 53 29-81 21-82 (87)
271 3cpk_A Uncharacterized protein 26.2 30 0.001 25.5 1.8 27 102-136 18-45 (150)
272 1j1l_A Pirin; beta sandwich, c 25.9 1.1E+02 0.0039 24.4 5.4 56 93-154 190-245 (290)
273 3shr_A CGMP-dependent protein 25.6 90 0.0031 23.7 4.7 53 93-149 80-135 (299)
274 3nx6_A 10KDA chaperonin; bacte 25.5 43 0.0015 22.7 2.4 39 102-143 44-82 (95)
275 3h8q_A Thioredoxin reductase 3 25.2 88 0.003 20.7 4.0 53 29-81 34-87 (114)
276 3tnp_B CAMP-dependent protein 23.3 92 0.0031 25.7 4.5 34 93-126 308-348 (416)
277 4din_B CAMP-dependent protein 22.9 96 0.0033 25.1 4.5 57 93-149 289-350 (381)
278 3s57_A Alpha-ketoglutarate-dep 22.4 68 0.0023 24.2 3.3 37 98-134 133-178 (204)
279 2kij_A Copper-transporting ATP 21.4 36 0.0012 23.7 1.4 14 119-132 41-54 (124)
280 3rcq_A Aspartyl/asparaginyl be 21.3 1E+02 0.0035 23.4 4.1 65 64-143 103-173 (197)
281 3dkq_A PKHD-type hydroxylase S 20.7 85 0.0029 24.6 3.6 36 116-151 158-194 (243)
282 2ab1_A Hypothetical protein; H 20.6 24 0.00081 24.9 0.3 27 102-136 10-37 (122)
283 3nnf_A CURA; non-HAEM Fe(II)/a 20.6 50 0.0017 27.6 2.2 40 116-155 234-278 (344)
284 2rqx_A PMRD, polymyxin B resis 20.1 2E+02 0.0069 19.1 5.4 34 117-150 36-69 (89)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=2e-46 Score=296.08 Aligned_cols=157 Identities=57% Similarity=1.064 Sum_probs=151.6
Q ss_pred ceEEEEecCCCCCCCCCCccCCCCcCCHhHHhhcCcEEEecCCCCCCChHHHHHHHHhcCCceeeeeeeCCCcccCHHHH
Q 031374 2 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEK 81 (160)
Q Consensus 2 ~~~aw~~~~~~~~~~~~~~~~~~~~~~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~dvi~v~~~~~p~~~~~ 81 (160)
||+|||||++++|||+||+++|++.||+++|+++||+||+++++.++++.+|++|++++||.+.|+++++++++|+|+++
T Consensus 13 ~~~~~~~~~~~~d~~~ph~~~~~~~v~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~~~k 92 (191)
T 1vr3_A 13 MVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEK 92 (191)
T ss_dssp CCEEEEBCSCCSCTTSCCBCSSCCBCCHHHHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHHH
T ss_pred hheeeeccCCccccCcccccCCCCccCHHHHHhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcchhhh
Confidence 89999999999999999999999999999999999999999987777789999999999999999999999877999999
Q ss_pred hcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCcccCC
Q 031374 82 LKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQRQS 158 (160)
Q Consensus 82 ~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~w~~ 158 (160)
+..++.+|+|+++|++||++|+|+|.+++.+|+|+++.|++||+|+||+|++|+|.+++++++++||+|..+|.|+.
T Consensus 93 ~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~ 169 (191)
T 1vr3_A 93 IKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTP 169 (191)
T ss_dssp HHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCC
T ss_pred hccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccC
Confidence 99999999999999999999999999998778999999999999999999999999999999999999999999984
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=99.97 E-value=2e-32 Score=214.10 Aligned_cols=147 Identities=22% Similarity=0.429 Sum_probs=126.5
Q ss_pred ecCCCCCCCCCCccCCCCcCCHhHHhhcCcEE--EecCCCCC---CC-------hHHHHHHHHhcCCceeeeeeeCCCcc
Q 031374 8 MDESSQDQRLPHHLNPKQFVSLDQLAELGVLY--WRLNPKNY---EN-------DEELQKIREARGYSYMDLLDLCPEKV 75 (160)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~GV~~--w~~~~~~~---~~-------~~~l~~l~~~~gy~~~dvi~v~~~~~ 75 (160)
++++++..++....+++.+ +++|+++||+| |+++.+.. +. +.+|++|++++||.+.|+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~i--~~~L~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~- 82 (179)
T 1zrr_A 6 FSVKDPQNSLWHSTNAEEI--QQQLNAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN- 82 (179)
T ss_dssp ECSSCSSCEEEEECCSHHH--HHHHHHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-
T ss_pred ecCCCcCCcceeeCCHHHH--HHHHHHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-
Confidence 3455555666666677777 89999999999 54443221 21 3579999999999999999999885
Q ss_pred cCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCcc
Q 031374 76 TNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQ 155 (160)
Q Consensus 76 p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~ 155 (160)
|++++++..|+.+|.|+++|++||++|+|+|.++ .+|+|+++.|++||+|+||+|++|+|.++++++++|||+|...|.
T Consensus 83 p~~~~~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~ 161 (179)
T 1zrr_A 83 PQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEG 161 (179)
T ss_dssp THHHHHHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGG
T ss_pred CChhHhhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCC
Confidence 9999999999999999999999999999999998 568899999999999999999999999999999999999999999
Q ss_pred cCC
Q 031374 156 RQS 158 (160)
Q Consensus 156 w~~ 158 (160)
|..
T Consensus 162 w~~ 164 (179)
T 1zrr_A 162 WIA 164 (179)
T ss_dssp EES
T ss_pred ccc
Confidence 953
No 3
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.29 E-value=1.2e-11 Score=84.45 Aligned_cols=64 Identities=20% Similarity=0.320 Sum_probs=56.0
Q ss_pred cccceecCc-ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCC
Q 031374 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYG 153 (160)
Q Consensus 85 ~~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (160)
....|+|.. +|++||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+.++.++...
T Consensus 40 ~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 40 AQKVHVHEGSDKVYYALEGEVVVRVGEE-----EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp EEEEECCSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred cCCccCCCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 357899985 799999999999999987 8999999999999999999998777778887776653
No 4
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.28 E-value=1.3e-11 Score=87.45 Aligned_cols=67 Identities=10% Similarity=0.131 Sum_probs=57.8
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEE-EEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCccc
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRI-WIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQR 156 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~-~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~w 156 (160)
....|+|+..|+.||++|++.+.++++ .+ .+++||++++|+|+.|++.+.++..+..+.++...|.+
T Consensus 39 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~ 106 (117)
T 2b8m_A 39 QMPKHYSNSYVHLIIIKGEMTLTLEDQ-----EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKK 106 (117)
T ss_dssp BCCCEECSSCEEEEEEESEEEEEETTS-----CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGG
T ss_pred cCCCEeCCCcEEEEEEeCEEEEEECCE-----EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCC
Confidence 356899999999999999999999987 78 99999999999999999998777777877775555443
No 5
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.26 E-value=1.7e-11 Score=87.71 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=55.6
Q ss_pred cccceecCc-ceEEEEeeeeEEEEE-ecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHAD-EEIRYCLEGSGYFDV-RDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~-~Ei~yvl~G~g~f~i-~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|.. +|++||++|++.+.+ +++ .+.+++||++++|+|+.|++.+.++..+.++.++..
T Consensus 51 ~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 51 EIASHVHPHGQDTWTVISGEAEYHQGNGI-----VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp EECCC-CTTCEEEEEEEECEEEEECSTTC-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred cCCcccCCCCeEEEEEEEeEEEEEECCCe-----EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 467999995 899999999999999 777 899999999999999999999988788888888765
No 6
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.22 E-value=3.7e-11 Score=86.13 Aligned_cols=60 Identities=22% Similarity=0.357 Sum_probs=53.2
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
....|+|...|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.++..+..+.+
T Consensus 46 ~~~~H~H~~~Ei~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 46 KSFRHSHNEYELFIVIQGNAIIRINDE-----DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp ECCCBCCSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ccCCEecCCeEEEEEEeCEEEEEECCE-----EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 357899999999999999999999988 999999999999999999999876666665544
No 7
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.22 E-value=3.4e-11 Score=86.05 Aligned_cols=62 Identities=27% Similarity=0.311 Sum_probs=53.3
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
.....|+|..+|++||++|++.+.++++ .+.+++||.|++|+|+.|++.+.+...+.++.+|
T Consensus 47 ~~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~ 108 (114)
T 3fjs_A 47 KQVGSHSVAGPSTIQCLEGEVEIGVDGA-----QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVL 108 (114)
T ss_dssp CEEEEECCSSCEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEESSSEEEEEEEEC
T ss_pred CccCceeCCCcEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEe
Confidence 3467899999999999999999999988 8999999999999999999998765444444444
No 8
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.21 E-value=6.1e-11 Score=82.37 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=53.9
Q ss_pred ccce--ecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 86 YTEH--IHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 86 ~~~H--~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
...| +|. .+|++||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+.++.++..
T Consensus 34 ~~~h~~~H~~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 34 EGGPDNRHRGADQWLFVVDGAGEAIVDGH-----TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EECCCSSSCCCEEEEEEEECCEEEEETTE-----EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred cCCcccccCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 4567 998 7999999999999999987 899999999999999999999877667777766543
No 9
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.20 E-value=3.5e-11 Score=84.91 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=47.6
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~ 141 (160)
....|+|+.+|+.||++|++.+.++++ .+.+++||+|++|+|+.|++.+.+.
T Consensus 50 ~~~~H~h~~~e~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~ 101 (114)
T 2ozj_A 50 SVSEEEYFGDTLYLILQGEAVITFDDQ-----KIDLVPEDVLMVPAHKIHAIAGKGR 101 (114)
T ss_dssp SCCCBCCSSCEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCCBEEEEEEE
T ss_pred ccccEECCCCeEEEEEeCEEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCC
Confidence 356899999999999999999999988 8999999999999999999987643
No 10
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.20 E-value=5.4e-11 Score=85.04 Aligned_cols=62 Identities=24% Similarity=0.305 Sum_probs=55.0
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|..+|++||++|++.+.++++ .+.+++||++++|+|+.|++.+.++ .+.++.+|..
T Consensus 53 ~~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p 114 (126)
T 4e2g_A 53 EMPAHEHPHEQAGVMLEGTLELTIGEE-----TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSP 114 (126)
T ss_dssp EEEEECCSSEEEEEEEEECEEEEETTE-----EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEES
T ss_pred cCCCccCCCceEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECC
Confidence 357899999999999999999999987 8999999999999999999998765 6777766664
No 11
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.19 E-value=9.3e-11 Score=87.33 Aligned_cols=68 Identities=18% Similarity=0.300 Sum_probs=59.7
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCCCcEEE-EEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC----CcccCC
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIR-IWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY----GVQRQS 158 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~-~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~----~p~w~~ 158 (160)
...|+|...|+.||++|++.+.++++ . +.+++||++++|+|+.|++.+..+..+.++.++.. .+.|.+
T Consensus 61 ~~~H~H~~~E~~~Vl~G~~~~~~~~~-----~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~~~~wl~ 133 (147)
T 2f4p_A 61 THWHSHPGGQILIVTRGKGFYQERGK-----PARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQVHLGPAEWLG 133 (147)
T ss_dssp ECSEECTTCEEEEEEEEEEEEEETTS-----CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECCGGGCCCEECC
T ss_pred cCceECCCceEEEEEeCEEEEEECCE-----EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCCCCCceecc
Confidence 46899999999999999999999987 7 89999999999999999999887777888777665 367764
No 12
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.18 E-value=5.9e-11 Score=86.33 Aligned_cols=64 Identities=22% Similarity=0.260 Sum_probs=56.5
Q ss_pred cccceecCcceEEEEeeeeEEEE--EecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCC
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFD--VRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYG 153 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~--i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (160)
....|+|...|+.||++|++.+. ++++ .+.+++||++++|+|+.|++.+.++..+.++.++...
T Consensus 51 ~~~~H~H~~~e~~~vl~G~~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 51 STPPHFHEWEHEIYVLEGSMGLVLPDQGR-----TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp ECCCEECSSCEEEEEEEECEEEEEGGGTE-----EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred cCCCccCCCceEEEEEEeEEEEEEeECCE-----EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 35789999999999999999999 9887 8999999999999999999998877778877776543
No 13
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.18 E-value=5.6e-11 Score=85.83 Aligned_cols=62 Identities=19% Similarity=0.198 Sum_probs=55.1
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
...|+|+..|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+.++.++..
T Consensus 61 ~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~ 122 (126)
T 1vj2_A 61 IDRHSHPWEHEIFVLKGKLTVLKEQG-----EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPK 122 (126)
T ss_dssp EEEECCSSCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEG
T ss_pred CCceeCCCcEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 56899999999999999999999988 899999999999999999999877667777766544
No 14
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.18 E-value=9e-11 Score=88.89 Aligned_cols=64 Identities=19% Similarity=0.308 Sum_probs=57.1
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCC
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYG 153 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (160)
....|+|..+|++||++|++.+.++++ .+.+++||+|+||+|+.|++.+.++..+..+.++...
T Consensus 56 ~~~~H~H~~~E~~~Vl~G~~~v~v~g~-----~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 56 YSTLERHAHVHAVMIHRGHGQCLVGET-----ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp ECCCBBCSSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred ccCceeCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 357899999999999999999999988 9999999999999999999998777788877776553
No 15
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.17 E-value=9.9e-11 Score=82.27 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=50.4
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
....|+|+..|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.+. ++++.+
T Consensus 52 ~~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~~v 109 (115)
T 1yhf_A 52 EIGRHSSPGDAMVTILSGLAEITIDQE-----TYRVAEGQTIVMPAGIPHALYAVEA--FQMLLV 109 (115)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTSCEEEEESSC--EEEEEE
T ss_pred ccCCEECCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECCC--ceEEEE
Confidence 356899999999999999999999987 8999999999999999999998763 444433
No 16
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.16 E-value=1.1e-10 Score=82.16 Aligned_cols=60 Identities=22% Similarity=0.227 Sum_probs=52.6
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
...|+|+.+|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.+ ...++.+|..
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~~p 106 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVDGV-----IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTFSP 106 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEESS--CEEEEEEEES
T ss_pred CCcEECCcceEEEEEeeEEEEEECCE-----EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEECC
Confidence 57899999999999999999999887 899999999999999999999876 4566666543
No 17
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.16 E-value=1.2e-10 Score=88.81 Aligned_cols=64 Identities=11% Similarity=0.153 Sum_probs=56.4
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC-CCcEEEEEEecC
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKVMQILSY 152 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~-~~~~~~ir~f~~ 152 (160)
.....|+|..+|++||++|++.+.++++ .+.+++||+|+||+|+.|++.+.+ +..+.++.++..
T Consensus 67 ~~~~~H~H~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 131 (167)
T 3ibm_A 67 GYTTLERHEHTHVVMVVRGHAEVVLDDR-----VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDS 131 (167)
T ss_dssp CBCCCBBCSSCEEEEEEESEEEEEETTE-----EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEES
T ss_pred CCCCCccCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeC
Confidence 3467899999999999999999999988 999999999999999999998876 677777766544
No 18
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.16 E-value=2.3e-10 Score=88.91 Aligned_cols=67 Identities=19% Similarity=0.226 Sum_probs=58.5
Q ss_pred ccceecCc---ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 86 YTEHIHAD---EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 86 ~~~H~H~~---~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
...|+|.. +|++||++|++.+.++++.++++.+.+++||+|++|+|+.|++.+.++..++++.++..
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~ 155 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPA 155 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEET
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECC
Confidence 45788863 79999999999999998877888899999999999999999999887777887776654
No 19
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.16 E-value=1.2e-10 Score=87.40 Aligned_cols=68 Identities=22% Similarity=0.175 Sum_probs=55.7
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCC----CcEEEEEEcCCcEEEeCCCCeeeeeeCC-CCcEEEEEEecCC
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDES----DQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKVMQILSYG 153 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~----~~~~~~~v~~GDli~iP~g~~H~f~~~~-~~~~~~ir~f~~~ 153 (160)
...|+|...|++||++|++.+.+++.+ ++.-.+.+++||+++||+|+.|++.+.+ +..+.++.++...
T Consensus 54 ~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 126 (163)
T 1lr5_A 54 TPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRP 126 (163)
T ss_dssp CCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESS
T ss_pred CCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCC
Confidence 578999999999999999999999811 1112899999999999999999999876 6677777666543
No 20
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.15 E-value=1.3e-10 Score=88.95 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=56.4
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|..+|++||++|++.+.++++ .+.+++||+|+||+|+.|++.+..+..+..+.++..
T Consensus 65 ~~~~H~H~~~E~~~Vl~G~~~~~v~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~ 127 (166)
T 3jzv_A 65 HSTLERHQHAHGVMILKGRGHAMVGRA-----VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNA 127 (166)
T ss_dssp ECCCBBCSSCEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEES
T ss_pred ccCceeCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 457899999999999999999999988 999999999999999999999877777777776654
No 21
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.13 E-value=1.6e-10 Score=86.57 Aligned_cols=63 Identities=24% Similarity=0.373 Sum_probs=56.7
Q ss_pred ccceec-CcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCC-CeeeeeeCCCCcEEEEEEecCC
Q 031374 86 YTEHIH-ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG-IYHRFTLDTSNYVKVMQILSYG 153 (160)
Q Consensus 86 ~~~H~H-~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g-~~H~f~~~~~~~~~~ir~f~~~ 153 (160)
...|+| ..+|++||++|++.+.++++ .+.+++||+|++|+| +.|++.+.++..+.++.++...
T Consensus 60 ~~~H~H~~~~E~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~ 124 (162)
T 3l2h_A 60 TEYHLHHYEEEAVYVLSGKGTLTMEND-----QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRL 124 (162)
T ss_dssp SSSBEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECC
T ss_pred CCCccCCCCCEEEEEEEEEEEEEECCE-----EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCC
Confidence 578999 68999999999999999988 899999999999998 9999998877788888777654
No 22
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.13 E-value=1.6e-10 Score=83.61 Aligned_cols=60 Identities=28% Similarity=0.428 Sum_probs=51.0
Q ss_pred ccceecCc-ceEEEEeeeeEEEEEec-CCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 86 YTEHIHAD-EEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 86 ~~~H~H~~-~Ei~yvl~G~g~f~i~~-~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
...|+|.. +|++||++|++.+.+++ + .+.+++||++++|+|+.|++.+.++. .+++.++.
T Consensus 56 ~~~H~H~~~~E~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~ 117 (134)
T 2o8q_A 56 PTWHTHTVGFQLFYVLRGWVEFEYEDIG-----AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVS 117 (134)
T ss_dssp CCCEEECCSCEEEEEEESEEEEEETTTE-----EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEES
T ss_pred CCCEECCCCcEEEEEEeCEEEEEECCcE-----EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEEC
Confidence 47899997 99999999999999998 7 89999999999999999999884443 45554443
No 23
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.12 E-value=2.1e-10 Score=79.53 Aligned_cols=64 Identities=27% Similarity=0.279 Sum_probs=53.3
Q ss_pred CcccceecCc-ceE-EEEeeeeEEEEEe-cCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCc
Q 031374 84 NFYTEHIHAD-EEI-RYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGV 154 (160)
Q Consensus 84 ~~~~~H~H~~-~Ei-~yvl~G~g~f~i~-~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p 154 (160)
.....|+|+. .|+ .||++|++.+.++ ++ .+.+++||++++|+|+.|++.+.++ ..++.+|...|
T Consensus 44 ~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~~p~~ 110 (110)
T 2q30_A 44 QELPVHSHNIEGELNIVVLEGEGEFVGDGDA-----VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTIAPPI 110 (110)
T ss_dssp CEEEEECCSSSCEEEEEEEESCEEEECGGGC-----EEEECTTEEEEEETTSCEEEEESSS--EEEEEEEESCC
T ss_pred CcCCcccCCCCccEEEEEEeCEEEEEeCCCE-----EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEECCCC
Confidence 3457899985 788 8999999999998 57 8999999999999999999998754 56666676543
No 24
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.11 E-value=2.8e-10 Score=84.42 Aligned_cols=68 Identities=19% Similarity=0.251 Sum_probs=56.0
Q ss_pred cccceecCc-ceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|.. +|++||++|++.+.+++..+ .++++.+++||+|++|+|+.|++.+.++..++++.++..
T Consensus 55 ~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~ 124 (148)
T 2oa2_A 55 DIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAP 124 (148)
T ss_dssp BCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEES
T ss_pred ccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECC
Confidence 357899984 69999999999999997732 244599999999999999999999877777777766543
No 25
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.11 E-value=9.8e-11 Score=80.19 Aligned_cols=50 Identities=32% Similarity=0.573 Sum_probs=46.7
Q ss_pred ccceecCc-ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 86 YTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 86 ~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
...|+|+. .|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.+
T Consensus 42 ~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 42 FVWHEHADTDEVFIVMEGTLQIAFRDQ-----NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp CCCBCCTTCCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCceeCCCCcEEEEEEeCEEEEEECCE-----EEEEcCCCEEEECCCCeEeeEcCC
Confidence 67899998 999999999999999988 899999999999999999998763
No 26
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.10 E-value=4.3e-10 Score=85.24 Aligned_cols=75 Identities=21% Similarity=0.249 Sum_probs=62.4
Q ss_pred eeeeeeCCCcccCHHHHhcCcccceecCc-ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCC--CeeeeeeCCC
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG--IYHRFTLDTS 141 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g--~~H~f~~~~~ 141 (160)
.-++++.|+. .....|+|.. +|++||++|++.+.++++ .+.+++||+|++|+| +.|++.+.++
T Consensus 45 ~~~~~l~pG~---------~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 45 VNLVRLEPGA---------KSSLRHYHMEQDEFVMVTEGALVLVDDQG-----EHPMVPGDCAAFPAGDPNGHQFVNRTD 110 (163)
T ss_dssp EEEEEECTTC---------BSSSSEEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCCCBEEECCSS
T ss_pred EEEEEECCCC---------cCCCCccCCCCcEEEEEEECEEEEEECCE-----EEEeCCCCEEEECCCCCcceEEEECCC
Confidence 3456666653 1236899987 799999999999999988 999999999999999 9999998777
Q ss_pred CcEEEEEEecCC
Q 031374 142 NYVKVMQILSYG 153 (160)
Q Consensus 142 ~~~~~ir~f~~~ 153 (160)
..++++.++...
T Consensus 111 ~~~~~l~v~~p~ 122 (163)
T 3i7d_A 111 APATFLVVGTRT 122 (163)
T ss_dssp SCEEEEEEEECC
T ss_pred CCEEEEEEECCC
Confidence 788888777654
No 27
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.06 E-value=1e-09 Score=85.69 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=58.5
Q ss_pred cccceecCc-ceEEEEeeeeEEEEEecCC---CcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDES---DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~-~Ei~yvl~G~g~f~i~~~~---~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|+. +|+.||++|++.+.+.+.+ ++.+...+++||++++|+|+.|++.+..+..+.++.+|..
T Consensus 84 ~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~ 155 (201)
T 1fi2_A 84 TNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNS 155 (201)
T ss_dssp EEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESS
T ss_pred CCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECC
Confidence 357899995 7999999999999997554 6777899999999999999999999877777888877654
No 28
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.06 E-value=3e-10 Score=79.27 Aligned_cols=54 Identities=22% Similarity=0.416 Sum_probs=46.1
Q ss_pred cceecCc-ceEEEEeeeeEEEEEec-CCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEE
Q 031374 87 TEHIHAD-EEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVM 147 (160)
Q Consensus 87 ~~H~H~~-~Ei~yvl~G~g~f~i~~-~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~i 147 (160)
..|+|+. +|+.||++|++.+.+++ + .+.+++||++++|+|+.|++.+.+ .++++
T Consensus 41 ~~H~H~~~~E~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l 96 (107)
T 2i45_A 41 GWHTHGYSDKVLFAVEGDMAVDFADGG-----SMTIREGEMAVVPKSVSHRPRSEN--GCSLV 96 (107)
T ss_dssp CCBCC--CCEEEEESSSCEEEEETTSC-----EEEECTTEEEEECTTCCEEEEEEE--EEEEE
T ss_pred cceeCCCCCEEEEEEeCEEEEEECCCc-----EEEECCCCEEEECCCCcEeeEeCC--CeEEE
Confidence 5899998 99999999999999998 7 899999999999999999998843 34444
No 29
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.06 E-value=5.8e-10 Score=81.39 Aligned_cols=59 Identities=27% Similarity=0.376 Sum_probs=51.9
Q ss_pred ccceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 86 YTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 86 ~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
...|+|. .+|++||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..++++.+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDNGK-----DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEECCE-----EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 4689998 6999999999999999988 899999999999999999999876666665544
No 30
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.05 E-value=7.4e-10 Score=79.31 Aligned_cols=57 Identities=23% Similarity=0.395 Sum_probs=48.6
Q ss_pred ceecCcce-EEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 88 EHIHADEE-IRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 88 ~H~H~~~E-i~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.|+|+..| ++||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+.++.+
T Consensus 42 ~H~H~~~e~~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i 99 (125)
T 3cew_A 42 VHSHKQNEEIYGILSGKGFITIDGE-----KIELQAGDWLRIAPDGKRQISAASDSPIGFLCI 99 (125)
T ss_dssp EEEESSEEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTCCEEEEEBTTBCEEEEEE
T ss_pred CccCCCceEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEE
Confidence 79999765 5569999999999988 899999999999999999998876555665544
No 31
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.03 E-value=6e-10 Score=80.72 Aligned_cols=64 Identities=16% Similarity=0.175 Sum_probs=49.1
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCcccCC
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQRQS 158 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~w~~ 158 (160)
+.+|. ..+|++||++|++.+.++++ .+.+++||.|.||+|+.|++.+.+ ...+++ |.-.|.|.+
T Consensus 53 ~~~H~-~~~E~~~Vl~G~~~~~~~g~-----~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l--~v~~P~w~~ 116 (119)
T 3lwc_A 53 LTETM-AVDDVMIVLEGRLSVSTDGE-----TVTAGPGEIVYMPKGETVTIRSHE-EGALTA--YVTYPHWRP 116 (119)
T ss_dssp EEEEC-SSEEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCEEEEEEEE-EEEEEE--EEEECC---
T ss_pred cCccC-CCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCEEEEEcCC-CCeEEE--EEECCCCcc
Confidence 34554 67999999999999999877 899999999999999999998753 345544 444555864
No 32
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.03 E-value=7.3e-10 Score=88.54 Aligned_cols=66 Identities=20% Similarity=0.248 Sum_probs=57.8
Q ss_pred cCcccceecCcceEEEEeeeeEEEEEe-cCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCc
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGV 154 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i~-~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p 154 (160)
+..++.|.|..+|++|||+|.+.|.++ ++ ...+++||.|++|+|+.|+.+. .+..+.++-++.+.|
T Consensus 142 G~~yP~HsHp~EEiy~VLsG~~e~~v~~g~-----~~~l~pGd~v~ipsgv~Ha~rt-~dePllalwvW~G~~ 208 (217)
T 4b29_A 142 GLDYGWHEHLPEELYSVVSGRALFHLRNAP-----DLMLEPGQTRFHPANAPHAMTT-LTDPILTLVLWRGAG 208 (217)
T ss_dssp SCEEEEEECSSEEEEEEEEECEEEEETTSC-----CEEECTTCEEEECTTCCEEEEC-CSSCEEEEEEEESTT
T ss_pred CCcCCCCCCCCceEEEEEeCCEEEEECCCC-----EEecCCCCEEEcCCCCceeEEE-CCccEEEEEEEeCCC
Confidence 456899999999999999999999998 44 7899999999999999999985 447788887777765
No 33
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.03 E-value=6.7e-10 Score=76.67 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=51.0
Q ss_pred ccceecCcc-eEEEEeeeeEEEEEec--CCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 86 YTEHIHADE-EIRYCLEGSGYFDVRD--ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 86 ~~~H~H~~~-Ei~yvl~G~g~f~i~~--~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
...|.|..+ |+.||++|++.+.+++ + .+.+++||.+.+|+|+.|++.+.++..++++.+
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~-----~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETPEGSV-----TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEETTEEE-----EEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeCCCCE-----EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 458999975 6999999999999987 5 799999999999999999999877666666544
No 34
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.03 E-value=7.1e-10 Score=79.04 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=49.3
Q ss_pred ceecCcceEEEEeeeeEEEEEecCCCcEEE--EEEcCCcEEEeCCCCeeeeeeCCCC-cEEEEEEec
Q 031374 88 EHIHADEEIRYCLEGSGYFDVRDESDQWIR--IWIKAGDLIVLPAGIYHRFTLDTSN-YVKVMQILS 151 (160)
Q Consensus 88 ~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~--~~v~~GDli~iP~g~~H~f~~~~~~-~~~~ir~f~ 151 (160)
+|.|..+|+.||++|++.+.++++ . +.+++||.|+||+|+.|++.+.+.. .+..+.+|.
T Consensus 48 ~~~~~~~E~~~Vl~G~~~l~~~~~-----~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 48 WYDSPQDEWVMVVSGSAGIECEGD-----TAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp CBCCSSEEEEEEEESCEEEEETTC-----SSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred cccCCccEEEEEEeCeEEEEECCE-----EEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 366788999999999999999987 7 9999999999999999999875543 555555554
No 35
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.02 E-value=1.1e-09 Score=84.09 Aligned_cols=58 Identities=21% Similarity=0.308 Sum_probs=52.1
Q ss_pred ceecCcceEEEEeeeeEEEEEec----CCCcEEEEEEcCCcEEEeCCCCeeeeeeC-CCCcEEEEEEe
Q 031374 88 EHIHADEEIRYCLEGSGYFDVRD----ESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSNYVKVMQIL 150 (160)
Q Consensus 88 ~H~H~~~Ei~yvl~G~g~f~i~~----~~~~~~~~~v~~GDli~iP~g~~H~f~~~-~~~~~~~ir~f 150 (160)
.|.|..+|+.||++|++.+.+++ + .+.+++||.+++|+|++|++.+. ++..++++.++
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~~~~~~-----~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGDKENPK-----EALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESCTTSCE-----EEEECTTCEEEECTTCCEEEEESTTSCCEEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECCcCCcc-----cEEECCCCEEEeCCCCceEEEecCCCCCeEEEEEe
Confidence 69999999999999999999998 6 89999999999999999999987 66677776654
No 36
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.99 E-value=1.4e-09 Score=88.48 Aligned_cols=59 Identities=17% Similarity=0.218 Sum_probs=53.0
Q ss_pred ccc-eecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC-CcEEEEEE
Q 031374 86 YTE-HIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKVMQI 149 (160)
Q Consensus 86 ~~~-H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~-~~~~~ir~ 149 (160)
... |+|..+|++||++|++.+.++++ .+.+++||+|++|+|+.|++.+.++ ..++.+.+
T Consensus 195 ~~~~H~H~~~E~~yVl~G~~~~~i~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~ 255 (274)
T 1sef_A 195 HAYIETHVQEHGAYLISGQGMYNLDNE-----WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYS 255 (274)
T ss_dssp CSSCBCCSCCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred cCcceeccCeEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEE
Confidence 355 99999999999999999999988 8999999999999999999998766 77777766
No 37
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.99 E-value=1.1e-09 Score=86.86 Aligned_cols=62 Identities=18% Similarity=0.313 Sum_probs=53.9
Q ss_pred cCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
+...+.|.|+.+|+.||++|++.|.++++ ...+++||++++|+|++|++.+.+. ++++-++.
T Consensus 47 G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~-----~~~l~~Gd~~~~p~~~~H~~~a~~~--~~~l~i~~ 108 (227)
T 3rns_A 47 DEEITAEAMLGNRYYYCFNGNGEIFIENN-----KKTISNGDFLEITANHNYSIEARDN--LKLIEIGE 108 (227)
T ss_dssp TCEEEECSCSSCEEEEEEESEEEEEESSC-----EEEEETTEEEEECSSCCEEEEESSS--EEEEEEEE
T ss_pred CCccCccccCCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECCC--cEEEEEEe
Confidence 45678999999999999999999999988 8999999999999999999998764 55554433
No 38
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.99 E-value=8.4e-10 Score=84.27 Aligned_cols=57 Identities=19% Similarity=0.290 Sum_probs=49.9
Q ss_pred ccceecC-cceEEEEee--eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 86 YTEHIHA-DEEIRYCLE--GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 86 ~~~H~H~-~~Ei~yvl~--G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
...|+|. .+|++||++ |++.+.++++ .+.+++||+|+||+|+.|++. + .++++.++.
T Consensus 58 ~~~H~H~~~~E~~yVLe~~G~g~v~idge-----~~~l~~GD~v~IPpg~~H~i~-g---~l~~L~I~~ 117 (157)
T 4h7l_A 58 ARTHYHREHQEIYVVLDHAAHATIELNGQ-----SYPLTKLLAISIPPLVRHRIV-G---EATIINIVS 117 (157)
T ss_dssp CCCBBCSSCEEEEEEEEECTTCEEEETTE-----EEECCTTEEEEECTTCCEEEE-S---CEEEEEEEE
T ss_pred ccceECCCCcEEEEEEecCcEEEEEECCE-----EEEeCCCCEEEECCCCeEeeE-C---CEEEEEEEC
Confidence 5789997 579999999 9999999988 899999999999999999996 2 567766654
No 39
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.98 E-value=1.1e-09 Score=87.55 Aligned_cols=63 Identities=19% Similarity=0.156 Sum_probs=57.7
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|..+|++||++|++.+.++++ .+.+++||.|.+|+|+.|++.+.++..++++.+|..
T Consensus 158 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p 220 (243)
T 3h7j_A 158 EMPFHKHRNEQIGICIGGGYDMTVEGC-----TVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFP 220 (243)
T ss_dssp EEEEECCSSEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred cCCCEeCCCcEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcC
Confidence 457899999999999999999999988 899999999999999999999988888888888873
No 40
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.96 E-value=1.6e-09 Score=83.01 Aligned_cols=58 Identities=19% Similarity=0.119 Sum_probs=50.4
Q ss_pred ceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 88 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 88 ~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
.|+|..+|+.||++|++.+.++++ .+.+++||.|++|+|++|++.+.++..+ ++.++.
T Consensus 121 ~H~h~~~E~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~ 178 (192)
T 1y9q_A 121 PHALGVIEYIHVLEGIMKVFFDEQ-----WHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVA 178 (192)
T ss_dssp CCSTTCEEEEEEEESCEEEEETTE-----EEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEE
T ss_pred CCCCCCEEEEEEEEeEEEEEECCE-----EEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEe
Confidence 678888999999999999999988 8999999999999999999998766666 554443
No 41
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.96 E-value=1.8e-09 Score=85.60 Aligned_cols=61 Identities=26% Similarity=0.431 Sum_probs=52.5
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
.....|+|+.+|+.||++|++.+.++++ .+.+++||.+++|+|++|++.++ ...++++.+.
T Consensus 164 ~~~~~H~H~~~e~~~Vl~G~~~~~i~g~-----~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 164 ESLDPHKAPGDALVTVLDGEGKYYVDGK-----PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp CEEEEECCSSEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CccCCEECCCcEEEEEEeEEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 4567999999999999999999999988 89999999999999999999984 3456665443
No 42
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.96 E-value=1.4e-09 Score=76.78 Aligned_cols=47 Identities=26% Similarity=0.382 Sum_probs=43.0
Q ss_pred ceecCcceEEEEeeeeEEEEEe-cCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 88 EHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 88 ~H~H~~~Ei~yvl~G~g~f~i~-~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
.| |+.+|+.||++|++.+.++ ++ .+.+++||+|++|+|++|++.+.+
T Consensus 45 ~h-H~~~E~~~Vl~G~~~~~i~~g~-----~~~l~~GD~i~ip~g~~H~~~n~~ 92 (101)
T 1o5u_A 45 WY-YDTNETCYILEGKVEVTTEDGK-----KYVIEKGDLVTFPKGLRCRWKVLE 92 (101)
T ss_dssp EE-CSSCEEEEEEEEEEEEEETTCC-----EEEEETTCEEEECTTCEEEEEEEE
T ss_pred cc-CCceEEEEEEeCEEEEEECCCC-----EEEECCCCEEEECCCCcEEEEeCC
Confidence 46 8899999999999999998 77 899999999999999999998744
No 43
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.94 E-value=4.9e-09 Score=87.62 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=56.4
Q ss_pred cccceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|. .+|++||++|++.+.+.+.+++-..+.+++||+++||+|+.|++.+.++..+.++-+|..
T Consensus 64 ~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~ 132 (361)
T 2vqa_A 64 IRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFND 132 (361)
T ss_dssp EEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESS
T ss_pred CCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECC
Confidence 35689999 899999999999999965444333689999999999999999999887677887766643
No 44
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.90 E-value=1.1e-08 Score=90.11 Aligned_cols=67 Identities=13% Similarity=0.271 Sum_probs=58.1
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
+.....|+|+ ..|++||++|++.+.+.+.++ +++...+++||+++||+|..|+..++ +..+.++.|+
T Consensus 348 Ga~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng-~~~l~~l~f~ 416 (476)
T 1fxz_A 348 NAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ-SDNFEYVSFK 416 (476)
T ss_dssp TCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-STTEEEEEEE
T ss_pred CceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC-CCCEEEEEEE
Confidence 3568899998 689999999999999987653 57777899999999999999999984 6778888888
No 45
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.90 E-value=5.2e-09 Score=76.82 Aligned_cols=49 Identities=14% Similarity=0.313 Sum_probs=45.9
Q ss_pred cceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 87 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 87 ~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
..|.|+..|+.||++|+|.+.++++ .+.+++||+++||||+.|.+...+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQGR-----EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEECCE-----EEEecCCeEEEEcCCCCEEEEeCC
Confidence 4789999999999999999999988 999999999999999999988765
No 46
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.89 E-value=7.7e-09 Score=84.91 Aligned_cols=68 Identities=19% Similarity=0.364 Sum_probs=59.2
Q ss_pred eeeeeeCCCcccCHHHHhcCccc-ceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYT-EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~-~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
..++++.|+. ..+ .|+|..+|.+|||+|+|.|.+++. .+.|++||+|.++|+..|++.+.....
T Consensus 188 ~~~~t~~PG~----------~~p~~e~H~~eh~~~vL~G~g~y~l~~~-----~~~V~~GD~i~~~~~~~h~~~n~G~e~ 252 (266)
T 4e2q_A 188 IHTMDFQPGE----------FLNVKEVHYNQHGLLLLEGQGIYRLGDN-----WYPVQAGDVIWMAPFVPQWYAALGKTR 252 (266)
T ss_dssp EEEEEECTTC----------BCSSCCCCSCCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSC
T ss_pred EEEEEECCCc----------CcCCceEcccceEEEEEeceEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCCCC
Confidence 5677788763 233 588999999999999999999988 899999999999999999999988788
Q ss_pred EEEE
Q 031374 144 VKVM 147 (160)
Q Consensus 144 ~~~i 147 (160)
++.|
T Consensus 253 ~~yl 256 (266)
T 4e2q_A 253 SRYL 256 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8877
No 47
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.89 E-value=2.3e-09 Score=90.74 Aligned_cols=61 Identities=26% Similarity=0.396 Sum_probs=53.8
Q ss_pred CcccceecCcceEEEEeeeeEEE-EEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYF-DVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f-~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.....|+|..+|++||++|+|.| .++++ ++.+++||+|++|+|+.|++.+.++..+..+.+
T Consensus 111 ~~~~~H~H~~~e~~yVl~G~g~~t~v~g~-----~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 111 EVAPSHRHNQSALRFIVEGKGAFTAVDGE-----RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp CEEEEEEESSCEEEEEEECSSCEEEETTE-----EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CCcCCeecCcceEEEEEEEEEEEEEECCE-----EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 44678999999999999999999 88877 899999999999999999999877767776654
No 48
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.89 E-value=9.9e-09 Score=85.74 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=58.1
Q ss_pred cccceecCc-ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|.. +|++||++|++.+.+.+.+++...+.+++||++++|+|..|++.+.++..++++.++..
T Consensus 246 ~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 246 MRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp EEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred ccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 456799987 99999999999999965555555789999999999999999999877778888877764
No 49
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.88 E-value=5.3e-09 Score=88.31 Aligned_cols=67 Identities=21% Similarity=0.283 Sum_probs=56.6
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|..+|++||++|++.+.+.+.+++.+.+.+++||++++|+|+.|++.+.++ .+.++-+|..
T Consensus 91 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~~~~~v~~~ 157 (385)
T 1j58_A 91 IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GAEFLLVFDD 157 (385)
T ss_dssp EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EEEEEEEESC
T ss_pred CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CEEEEEEECC
Confidence 467899999999999999999999876677666799999999999999999987653 4666666654
No 50
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.88 E-value=6.3e-09 Score=79.96 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=56.7
Q ss_pred eeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCC-c
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSN-Y 143 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~-~ 143 (160)
.-.+++.|+. ....|.|..+|+.||++|++.+.+.+.++. ..+.+++||++++|+|+.|++.+..+. .
T Consensus 43 ~~~~~l~pg~----------~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~ 111 (178)
T 1dgw_A 43 VLEYCSKPNT----------LLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQN 111 (178)
T ss_dssp EEEEEECTTE----------EEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSSC
T ss_pred EEEEEecCCc----------EecCcCCCCCEEEEEEeEEEEEEEEeCCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCC
Confidence 4456666653 357883346999999999999999743322 278999999999999999999987654 6
Q ss_pred EEEEEEe
Q 031374 144 VKVMQIL 150 (160)
Q Consensus 144 ~~~ir~f 150 (160)
+.++-++
T Consensus 112 l~~l~v~ 118 (178)
T 1dgw_A 112 LRILKFA 118 (178)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7776654
No 51
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.88 E-value=3.4e-09 Score=90.58 Aligned_cols=61 Identities=25% Similarity=0.484 Sum_probs=54.6
Q ss_pred cCcccceecCcceEEEEeeeeE-EEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEE
Q 031374 83 KNFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQ 148 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g-~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir 148 (160)
+.....|.|..+|++||++|+| ++.++++ ++.+++||+|++|+|..|.+.++++..++.+-
T Consensus 113 G~~~~~HrH~~~ev~~VleG~G~~~~vdG~-----~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 113 RETAPEHRHSQNAFRFVVEGEGVWTVVNGD-----PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp TCEEEEEEESSCEEEECSSCEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CCccCceecccceEEEEEecceEEEEECCE-----EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 3557889999999999999999 5888888 99999999999999999999998888887764
No 52
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.88 E-value=6.2e-09 Score=85.59 Aligned_cols=63 Identities=30% Similarity=0.560 Sum_probs=55.3
Q ss_pred CcccceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 84 ~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
.....|+|. .+|++||++|++.+.++++ ++.+++||++++|+|+.|++.+.++ .++++.+|..
T Consensus 229 ~~~~~h~H~~~~e~~~vl~G~~~~~i~~~-----~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 229 DRIVDHYHEYHTETFYCLEGQMTMWTDGQ-----EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp CCCCCEECSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred CCCCCcCCCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 345679998 6999999999999999987 8999999999999999999998776 7777777643
No 53
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.87 E-value=6.9e-09 Score=85.31 Aligned_cols=61 Identities=21% Similarity=0.391 Sum_probs=53.1
Q ss_pred cccceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 85 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 85 ~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
....|+|. .+|++||++|++.+.++++ .+.+++||++++|+|+.|.+.+.++ .++++.++.
T Consensus 58 ~~~~h~H~~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~~ 119 (337)
T 1y3t_A 58 AFPLHVHKDTHEGILVLDGKLELTLDGE-----RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSYTM 119 (337)
T ss_dssp EEEEEECTTCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECST-TEEEEEEEE
T ss_pred CCCceeCCCceEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCC-CeEEEEEEC
Confidence 35689999 8999999999999999887 8999999999999999999998765 466666544
No 54
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.86 E-value=1.4e-08 Score=89.98 Aligned_cols=68 Identities=16% Similarity=0.274 Sum_probs=58.5
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
+.....|+|+ ..|++||++|++.+.+.+.++ +.+...+++||+++||+|..|+..+ .+..+.++.|+.
T Consensus 382 G~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~ 451 (510)
T 3c3v_A 382 NALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVAFKT 451 (510)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEES
T ss_pred CceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEEEEC
Confidence 3567899998 689999999999999987654 5677789999999999999999998 467788888884
No 55
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.85 E-value=7.5e-09 Score=89.19 Aligned_cols=62 Identities=19% Similarity=0.257 Sum_probs=54.4
Q ss_pred cCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC-CCcEEEEEE
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKVMQI 149 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~-~~~~~~ir~ 149 (160)
+.....|.|..+|++||++|+|++.|+++ ++.+++||+|++|+|..|.+.+++ +..++.+.+
T Consensus 304 G~~~~~HrH~~~~v~~VleG~G~~~V~ge-----~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 304 GEHTKAHRHTGNVIYNVAKGQGYSIVGGK-----RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp TCBCCCEEESSCEEEEEEECCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CCcCCCcccCCcEEEEEEeCeEEEEECCE-----EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 45578899999999999999999999988 999999999999999999999875 466666654
No 56
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.84 E-value=1.5e-08 Score=89.55 Aligned_cols=71 Identities=14% Similarity=0.230 Sum_probs=59.3
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCC-CcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC-Cc
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY-GV 154 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~-~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~-~p 154 (160)
+.....|+|+ ..|++||++|++.+.+.+.+ .+++...+++||+++||+|..|+..+++ ..+.++.+|.. .|
T Consensus 377 G~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ts~~p 450 (493)
T 2d5f_A 377 NGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFKTHHNA 450 (493)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSTTC
T ss_pred CceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEECCCCC
Confidence 3567899998 68999999999999998765 4566788999999999999999988754 67888888844 44
No 57
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.83 E-value=7.6e-09 Score=83.44 Aligned_cols=59 Identities=19% Similarity=0.121 Sum_probs=50.1
Q ss_pred ccceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC-CcEEEEEE
Q 031374 86 YTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKVMQI 149 (160)
Q Consensus 86 ~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~-~~~~~ir~ 149 (160)
...|.|. .+|++||++|++.+.++++ .+.+++||.|.+|+|+.|++.+.++ ..++++.+
T Consensus 192 ~~~h~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~ 252 (261)
T 1rc6_A 192 HGYIETHVQEHGAYILSGQGVYNLDNN-----WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYS 252 (261)
T ss_dssp BEEEEEESSCEEEEEEESEEEEESSSC-----EEEEETTCEEEECSSEEEEEEEC----CEEEEEE
T ss_pred cCcccCCCceEEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEE
Confidence 5678885 7899999999999999988 8999999999999999999998776 77777654
No 58
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.83 E-value=1.2e-08 Score=78.86 Aligned_cols=56 Identities=25% Similarity=0.340 Sum_probs=48.4
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
..+.+|.|+.+|++|+++|+..+.+.+. ++--.+.+++||+++||+|++|+-...+
T Consensus 46 ~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 46 HRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4578999999999999999999999863 3344799999999999999999986543
No 59
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.82 E-value=1.5e-08 Score=88.47 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=62.6
Q ss_pred eeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC-CCc
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNY 143 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~-~~~ 143 (160)
.-.+++.|+. ....|+|..+|++||++|++.+.+-+.++. ....+++||++++|+|+.|++.+.. +..
T Consensus 88 ~~~~~l~Pgg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~ 156 (445)
T 2cav_A 88 VLEYCSKPNT----------LLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQN 156 (445)
T ss_dssp EEEEEECSSE----------EEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSCC
T ss_pred EEEEEECCCc----------CccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCCC
Confidence 4456777653 467886778999999999999998644333 5889999999999999999999876 678
Q ss_pred EEEEEEecC
Q 031374 144 VKVMQILSY 152 (160)
Q Consensus 144 ~~~ir~f~~ 152 (160)
++++.+|..
T Consensus 157 l~~l~v~~~ 165 (445)
T 2cav_A 157 LRILKFAIT 165 (445)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 998888763
No 60
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.82 E-value=1.5e-08 Score=85.62 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=56.0
Q ss_pred cccceecCc-ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 85 ~~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
....|+|.. +|++||++|++.+.+.+.+++--.+.+++||++++|+|..|++.+.++..+.++.++..
T Consensus 269 ~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 269 MRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred ccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 356799998 99999999999999983222112789999999999999999999877778888877654
No 61
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.81 E-value=2.9e-08 Score=76.27 Aligned_cols=56 Identities=11% Similarity=0.003 Sum_probs=50.4
Q ss_pred cceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEE
Q 031374 87 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVM 147 (160)
Q Consensus 87 ~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~i 147 (160)
..+.|..+|++||++|+..+.++++ .+.+++||.+.+|+|..|++.+..+..++++
T Consensus 104 ~~~~h~gEE~~yVLeG~v~vtl~g~-----~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll 159 (166)
T 2vpv_A 104 LSNSFRTYITFHVIQGIVEVTVCKN-----KFLSVKGSTFQIPAFNEYAIANRGNDEAKMF 159 (166)
T ss_dssp EEECCSEEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred CccCCCceEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCCEEEEECCCCCEEEE
Confidence 4477889999999999999999988 9999999999999999999999877766655
No 62
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.81 E-value=1.1e-08 Score=88.23 Aligned_cols=61 Identities=23% Similarity=0.441 Sum_probs=54.3
Q ss_pred cCcccceecCcceEEEEeeeeEEE-EEecCCCcEEEEEEcCCcEEEeCCCCeeeeee-CCCCcEEEEE
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYF-DVRDESDQWIRIWIKAGDLIVLPAGIYHRFTL-DTSNYVKVMQ 148 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f-~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~-~~~~~~~~ir 148 (160)
+.....|.|...|++||++|+|.| .++++ ++.+++||+|++|+|..|...+ +++..++.+.
T Consensus 133 G~~~~~HrH~~~ev~~IleG~G~~t~v~G~-----~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~ 195 (394)
T 3bu7_A 133 GERAGAHRHAASALRFIMEGSGAYTIVDGH-----KVELGANDFVLTPNGTWHEHGILESGTECIWQD 195 (394)
T ss_dssp TCBCCCEEESSCEEEEEEECSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECTTCCCEEEEE
T ss_pred CCCcCCccCCcceEEEEEEeeEEEEEECCE-----EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEE
Confidence 355788999988999999999977 88877 9999999999999999999999 8777777774
No 63
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.81 E-value=9.6e-09 Score=82.12 Aligned_cols=60 Identities=22% Similarity=0.212 Sum_probs=52.4
Q ss_pred cccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEE-EeCCCCeeeeeeCCCCcEEEEEE
Q 031374 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLI-VLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli-~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
....|+|+.+|++||++|++.+.++++ ...+++||.| ++|+|+.|++.+.++..+.++-+
T Consensus 46 ~~~~H~H~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 46 NVEPHQHKEVQIGMVVSGELMMTVGDV-----TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEETTE-----EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ccCCEECCCcEEEEEEEeEEEEEECCE-----EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 467899999999999999999999887 8999999999 59999999999877666665543
No 64
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.80 E-value=2.2e-08 Score=80.38 Aligned_cols=70 Identities=20% Similarity=0.308 Sum_probs=57.5
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
..-++++.|+. .....|.|..+|.+|||+|++.|.++++ .+.+++||.+.++++.+|+|.+.....
T Consensus 166 ~~~~~tl~PG~---------~~~~~~~h~~ee~~~vLeG~~~~~~~~~-----~~~l~~GD~~~~~~~~pH~~~n~g~~~ 231 (246)
T 1sfn_A 166 MVSTMSFAPGA---------SLPYAEVHYMEHGLLMLEGEGLYKLEEN-----YYPVTAGDIIWMGAHCPQWYGALGRNW 231 (246)
T ss_dssp EEEEEEECTTC---------BCSSCBCCSSCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSC
T ss_pred EEEEEEECCCC---------ccCcccCCCceEEEEEEECEEEEEECCE-----EEEcCCCCEEEECCCCCEEEEcCCCCC
Confidence 35567777763 1122366889999999999999999988 899999999999999999999877777
Q ss_pred EEEE
Q 031374 144 VKVM 147 (160)
Q Consensus 144 ~~~i 147 (160)
++.+
T Consensus 232 ~~yl 235 (246)
T 1sfn_A 232 SKYL 235 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7655
No 65
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.79 E-value=1.5e-08 Score=76.85 Aligned_cols=52 Identities=21% Similarity=0.503 Sum_probs=44.4
Q ss_pred cCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
|..+|+.|||+|++.+.++++ .+.+++||.++||+|+.|++.+. ..++++-+
T Consensus 82 ~~~eE~~yVLeG~~~l~i~g~-----~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V 133 (151)
T 4axo_A 82 LNYDEIDYVIDGTLDIIIDGR-----KVSASSGELIFIPKGSKIQFSVP--DYARFIYV 133 (151)
T ss_dssp CSSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEE--EEEEEEEE
T ss_pred CCCcEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEE
Confidence 467899999999999999877 89999999999999999999885 34444433
No 66
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.79 E-value=8.9e-09 Score=83.16 Aligned_cols=65 Identities=20% Similarity=0.158 Sum_probs=53.7
Q ss_pred ccceecC-cceEEEEeeeeEEEEE--------ecC-------CCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEE-EE
Q 031374 86 YTEHIHA-DEEIRYCLEGSGYFDV--------RDE-------SDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKV-MQ 148 (160)
Q Consensus 86 ~~~H~H~-~~Ei~yvl~G~g~f~i--------~~~-------~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~-ir 148 (160)
...|+|. .+|++||++|++.+.+ ++. +++...+.+++||++++|+|+.|.|.+.+....++ +.
T Consensus 56 ~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~ 135 (239)
T 2xlg_A 56 PMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFV 135 (239)
T ss_dssp CCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEE
T ss_pred CCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 4789998 7999999999999999 543 12355789999999999999999999877666777 55
Q ss_pred Ee
Q 031374 149 IL 150 (160)
Q Consensus 149 ~f 150 (160)
++
T Consensus 136 ~~ 137 (239)
T 2xlg_A 136 WM 137 (239)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 67
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.79 E-value=3.5e-08 Score=85.39 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=62.5
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeC-CCC
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSN 142 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~-~~~ 142 (160)
..-.+++.|+. ....|.|..+|++||++|+|.+.+-+. +.-....+++||+++||+|+.|++.+. .+.
T Consensus 50 s~~~~~l~PGg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPNT----------ILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccCc----------CcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 35567777753 467896678999999999999998543 344488999999999999999999987 478
Q ss_pred cEEEEEEec
Q 031374 143 YVKVMQILS 151 (160)
Q Consensus 143 ~~~~ir~f~ 151 (160)
.+.++.++.
T Consensus 119 ~l~~l~~~~ 127 (416)
T 1uij_A 119 NLKMIWLAI 127 (416)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEec
Confidence 888888864
No 68
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.78 E-value=3.7e-08 Score=85.69 Aligned_cols=77 Identities=12% Similarity=0.191 Sum_probs=61.9
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC-CC
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SN 142 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~-~~ 142 (160)
..-.+++.|+. ....|+|..+|++||++|+|.+.+-+. +.-....+++||++++|+|+.|++.++. +.
T Consensus 62 s~~~~~l~PGg----------~~~pHh~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 62 RVVEFKSKPNT----------LLLPHHADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEecCCc----------CccCccCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 34567777753 467895568999999999999999643 3455889999999999999999999876 67
Q ss_pred cEEEEEEec
Q 031374 143 YVKVMQILS 151 (160)
Q Consensus 143 ~~~~ir~f~ 151 (160)
.+.++.+|.
T Consensus 131 ~l~~l~~~~ 139 (434)
T 2ea7_A 131 NLRIIKLAI 139 (434)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEec
Confidence 888887763
No 69
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.77 E-value=1.4e-08 Score=78.33 Aligned_cols=73 Identities=19% Similarity=0.276 Sum_probs=61.1
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEe-cCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCC
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~-~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~ 142 (160)
..-++++.|+. ....|.|..+|+.||++|++.+.++ ++ .+.+++||.+ +|+|+.|++.+..+.
T Consensus 80 ~~~~v~l~PG~----------~~~~H~H~~eE~~~VLeGel~l~ld~ge-----~~~L~~GDsi-~~~g~~H~~~N~g~~ 143 (172)
T 3es1_A 80 VIRVVDMLPGK----------ESPMHRTNSIDYGIVLEGEIELELDDGA-----KRTVRQGGII-VQRGTNHLWRNTTDK 143 (172)
T ss_dssp EEEEEEECTTC----------BCCCBCCSEEEEEEEEESCEEEECGGGC-----EEEECTTCEE-EECSCCBEEECCSSS
T ss_pred EEEEEEECCCC----------CCCCeecCceEEEEEEeCEEEEEECCCe-----EEEECCCCEE-EeCCCcEEEEeCCCC
Confidence 34556677653 2478999999999999999999998 67 8999999999 999999999988777
Q ss_pred cEEEEEEecC
Q 031374 143 YVKVMQILSY 152 (160)
Q Consensus 143 ~~~~ir~f~~ 152 (160)
.++++-++..
T Consensus 144 ~ar~l~V~~P 153 (172)
T 3es1_A 144 PCRIAFILIE 153 (172)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEcC
Confidence 8888877655
No 70
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.76 E-value=1.9e-08 Score=82.42 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=51.8
Q ss_pred cceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 87 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 87 ~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
..|.|..+|++||++|++.+.++++ .+.+++||.+.+|+|+.|++.+.++..++++.+.
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~g~-----~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~ 142 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIR 142 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEESSC-----EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CCcCCCceEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 4578999999999999999999988 9999999999999999999998766666665443
No 71
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.73 E-value=2.7e-08 Score=83.87 Aligned_cols=63 Identities=21% Similarity=0.347 Sum_probs=50.9
Q ss_pred ceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 88 EHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 88 ~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
.|+|. .+|++||++|++.+.+++.++..-.+.+++||+|++|+|+.|++.+.++.. +++-++.
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~ 128 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIV 128 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEE
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEc
Confidence 79998 899999999999999998222212899999999999999999999865544 5555543
No 72
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.73 E-value=5.8e-08 Score=81.84 Aligned_cols=63 Identities=16% Similarity=0.225 Sum_probs=53.3
Q ss_pred cCcccceecCcceEEEEeeeeEEEEEec-CCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i~~-~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
+.....|.|+.+++.||++|++.+.+++ + ++.+++||.|+||+|++|.+.+.+. ..+++.+.+
T Consensus 262 g~~~~~h~~~~~~~~~vleG~~~i~i~g~~-----~~~l~~Gd~~~iPag~~h~~~~~~~-~~~~l~~~~ 325 (350)
T 1juh_A 262 TVTVPTWSFPGACAFQVQEGRVVVQIGDYA-----ATELGSGDVAFIPGGVEFKYYSEAY-FSKVLFVSS 325 (350)
T ss_dssp TSCCCCBCCSSCEEEEEEESCEEEEETTSC-----CEEECTTCEEEECTTCCEEEEESSS-SEEEEEEEE
T ss_pred CCCCCcccCCCcEEEEEEeeEEEEEECCeE-----EEEeCCCCEEEECCCCCEEEEecCC-eEEEEEEec
Confidence 3457789999999999999999999998 6 8999999999999999999998754 444554443
No 73
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.71 E-value=4e-08 Score=86.47 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=65.4
Q ss_pred CCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCc----------------------EEEE
Q 031374 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ----------------------WIRI 118 (160)
Q Consensus 61 gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~----------------------~~~~ 118 (160)
|+.. -.++|.|. .+...|+|...|++||++|+|.+.+-..++. ....
T Consensus 47 gvs~-~r~~l~Pg----------gl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~ 115 (476)
T 1fxz_A 47 GVAL-SRCTLNRN----------ALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIY 115 (476)
T ss_dssp TCEE-EEEEECTT----------EEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEE
T ss_pred ceEE-EEEEEcCC----------CEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEE
Confidence 6643 34677765 3567899999999999999999999864432 1257
Q ss_pred EEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 119 WIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 119 ~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
.+++||+|.||+|+.||+.++.+..+.++.+|.
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d 148 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSIID 148 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEEC
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEEec
Confidence 899999999999999999998888999998876
No 74
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.69 E-value=4.7e-08 Score=72.04 Aligned_cols=52 Identities=29% Similarity=0.400 Sum_probs=44.4
Q ss_pred CcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 92 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 92 ~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
..+|+.||++|++.+.++++ .+.+++||.|++|+|..|.+...+ .++.+-++
T Consensus 74 ~~~E~~~VLeG~~~l~~~g~-----~~~l~~GD~i~~p~g~~h~~~~~~--~~~~l~v~ 125 (133)
T 2pyt_A 74 NYDEIDMVLEGELHVRHEGE-----TMIAKAGDVMFIPKGSSIEFGTPT--SVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEEE--EEEEEEEE
T ss_pred CCCEEEEEEECEEEEEECCE-----EEEECCCcEEEECCCCEEEEEeCC--CEEEEEEE
Confidence 57899999999999999987 899999999999999999998643 45555444
No 75
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.67 E-value=3e-08 Score=72.35 Aligned_cols=48 Identities=23% Similarity=0.302 Sum_probs=42.2
Q ss_pred ceecCcceEEEEeeeeEEEEE-ecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 88 EHIHADEEIRYCLEGSGYFDV-RDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 88 ~H~H~~~Ei~yvl~G~g~f~i-~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
.|.|..+|+.|||+|++.+.+ +++ .+.+++||.+++|+|..|.+.+.+
T Consensus 63 ~~~~~~~E~~~Vl~G~~~l~~~~g~-----~~~l~~GD~~~ip~g~~h~~~~~~ 111 (123)
T 3bcw_A 63 SNTTGYIEYCHIIEGEARLVDPDGT-----VHAVKAGDAFIMPEGYTGRWEVDR 111 (123)
T ss_dssp CCCTTEEEEEEEEEEEEEEECTTCC-----EEEEETTCEEEECTTCCCEEEEEE
T ss_pred eEcCCCcEEEEEEEEEEEEEECCCe-----EEEECCCCEEEECCCCeEEEEECC
Confidence 466666899999999999999 555 799999999999999999998754
No 76
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.67 E-value=5.7e-08 Score=85.12 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=64.1
Q ss_pred CCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCc-E--------------------EEEE
Q 031374 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ-W--------------------IRIW 119 (160)
Q Consensus 61 gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~-~--------------------~~~~ 119 (160)
|.. .-.++|.|. .+...|+|...|++||++|+|.+.+-..++. - ....
T Consensus 62 gvs-~~r~~i~pg----------gl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~ 130 (459)
T 2e9q_A 62 GVN-MIRHTIRPK----------GLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRP 130 (459)
T ss_dssp TEE-EEEEEECTT----------EEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEE
T ss_pred ceE-EEEEEEcCC----------CEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEE
Confidence 543 334677765 3568999999999999999999999644321 1 1458
Q ss_pred EcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 120 IKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 120 v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
+++||+++||+|+.||+.++.+..+.++.+|..
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~ 163 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFADT 163 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEecC
Confidence 999999999999999999988889999988763
No 77
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.66 E-value=6.7e-08 Score=85.38 Aligned_cols=81 Identities=14% Similarity=0.128 Sum_probs=64.6
Q ss_pred cCCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCC-----------------c--------
Q 031374 60 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESD-----------------Q-------- 114 (160)
Q Consensus 60 ~gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~-----------------~-------- 114 (160)
.|+ ..-.++|.|.. +...|+|+..|++||++|+|.+.+-..++ .
T Consensus 43 ~gv-~~~r~~i~pgg----------l~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~ 111 (493)
T 2d5f_A 43 AGV-TVSKRTLNRNG----------LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSH 111 (493)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEE
T ss_pred CCE-EEEEEEeCCCc----------EeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 465 44567788753 46899999999999999999999884221 0
Q ss_pred EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 115 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 115 ~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
.-...+++||+|+||+|+.||+.++.+..+.++.+|.
T Consensus 112 qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d 148 (493)
T 2d5f_A 112 QKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLD 148 (493)
T ss_dssp SCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEC
T ss_pred ceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEec
Confidence 0134899999999999999999998888999998876
No 78
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.66 E-value=6.7e-08 Score=79.12 Aligned_cols=70 Identities=17% Similarity=0.269 Sum_probs=57.9
Q ss_pred eeeeeeCCCcccCHHHHhcCccc-ceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYT-EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~-~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
..++++.|+. ... .|.|..+|.+|||+|+|.|.++++ .+.|++||+|.+++|..|+|.+.....
T Consensus 193 ~~~~~l~pG~----------~i~~~~~h~~e~~~~il~G~~~~~~~~~-----~~~v~~GD~~~~~~~~~h~~~n~g~~~ 257 (278)
T 1sq4_A 193 VNIVNFEPGG----------VIPFAETHVMEHGLYVLEGKAVYRLNQD-----WVEVEAGDFMWLRAFCPQACYSGGPGR 257 (278)
T ss_dssp EEEEEECSSS----------EESCCCCCSEEEEEEEEECEEEEEETTE-----EEEEETTCEEEEEESCCEEEECCSSSC
T ss_pred EEEEEECCCC----------CcCCCCCCCccEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCCEEEEcCCCCC
Confidence 4567777763 233 466888999999999999999988 899999999999999999999877777
Q ss_pred EEEEEE
Q 031374 144 VKVMQI 149 (160)
Q Consensus 144 ~~~ir~ 149 (160)
++.|.+
T Consensus 258 ~~yl~~ 263 (278)
T 1sq4_A 258 FRYLLY 263 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776643
No 79
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.66 E-value=1.2e-07 Score=84.18 Aligned_cols=68 Identities=13% Similarity=0.264 Sum_probs=56.5
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
+.....|+|+ ..|+.||++|++.+.+-+.++ +++...|++||+++||+|..|...++ ++.+.++.|.+
T Consensus 404 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~s 473 (531)
T 3fz3_A 404 NGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFKT 473 (531)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEES
T ss_pred CccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEec
Confidence 3567899998 589999999999999987654 67899999999999999999976655 55677775554
No 80
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.64 E-value=8e-08 Score=71.87 Aligned_cols=62 Identities=11% Similarity=0.138 Sum_probs=49.2
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCCCc---EEEEEEcCCcEEEeCCCCeeeeeeCCCCcE
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYV 144 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~---~~~~~v~~GDli~iP~g~~H~f~~~~~~~~ 144 (160)
...-..|.|. .+|++++++|++.+.+++.++. --.+.+++|++++||.|+.|...+.++..+
T Consensus 39 ~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~v 104 (140)
T 3d0j_A 39 EGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKM 104 (140)
T ss_dssp TTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEE
T ss_pred ccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEE
Confidence 3455789997 6999999999999999943110 116999999999999999999998765433
No 81
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.64 E-value=1.7e-07 Score=72.49 Aligned_cols=58 Identities=29% Similarity=0.349 Sum_probs=49.0
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCC---CcEEEEEEcCCcEEEeCCCCeeeeeeCCC
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDES---DQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~---~~~~~~~v~~GDli~iP~g~~H~f~~~~~ 141 (160)
..+.+|.|+.+|++|+++|+....+.+.+ .+.-.+.+++||++++|+|++|+-...++
T Consensus 45 ~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e 105 (176)
T 1zvf_A 45 ERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFAD 105 (176)
T ss_dssp CCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred cCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCC
Confidence 45789988999999999999999999732 14557999999999999999999866543
No 82
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.63 E-value=6.9e-08 Score=81.67 Aligned_cols=59 Identities=20% Similarity=0.175 Sum_probs=50.6
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.....|+|...|++||++|+|.+.|+++ ++.+++||+++||++..|.+.++ ..+..+++
T Consensus 279 ~~~~~H~h~~~ev~~v~~G~g~~~v~~~-----~~~~~~GD~~~vP~~~~H~~~n~--e~~~l~~~ 337 (354)
T 2d40_A 279 FASRVARTTDSTIYHVVEGSGQVIIGNE-----TFSFSAKDIFVVPTWHGVSFQTT--QDSVLFSF 337 (354)
T ss_dssp CBCCCBEESSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred CCCCceecCCcEEEEEEeCeEEEEECCE-----EEEEcCCCEEEECCCCeEEEEeC--CCEEEEEE
Confidence 4457799998899999999999999877 99999999999999999999885 34555544
No 83
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.62 E-value=1.9e-07 Score=81.79 Aligned_cols=69 Identities=10% Similarity=0.173 Sum_probs=58.4
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
+.....|+|. ..|+.||++|++.+.+-+.++ +.+.-.|++||+++||+|..|+..++ +..+.++.+|..
T Consensus 332 G~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng-~~~~~~l~~~~s 402 (459)
T 2e9q_A 332 NAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRAS-DRGFEWIAFKTN 402 (459)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESS
T ss_pred CcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeC-CCCeEEEEEecC
Confidence 4668899998 579999999999999987654 56667799999999999999998885 456888888855
No 84
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.61 E-value=1e-07 Score=82.09 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=64.2
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcE------EEeCCCCeeeee
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDL------IVLPAGIYHRFT 137 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDl------i~iP~g~~H~f~ 137 (160)
..-.+++.|.. +...|+|..+|++||++|+|.+.+-+.+++ ....+++||+ ++||+|+.|+..
T Consensus 53 s~~~~~l~pgg----------~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~ 121 (397)
T 2phl_A 53 RLVEFRSKPET----------LLLPQQADAELLLVVRSGSAILVLVKPDDR-REYFFLTSDNPIFSDHQKIPAGTIFYLV 121 (397)
T ss_dssp EEEEEEECSSE----------EEEEEEESEEEEEEEEESEEEEEEEETTTE-EEEEEEESSCTTSCSEEEECTTCEEEEE
T ss_pred EEEEEEECCCc----------CccCEecCCCeEEEEEeeeEEEEEEeCCCc-EEEEECCCCcccccceEEECCCCcEEEE
Confidence 34567777753 457889999999999999999999766555 3789999999 999999999998
Q ss_pred eCC-CCcEEEEEEec
Q 031374 138 LDT-SNYVKVMQILS 151 (160)
Q Consensus 138 ~~~-~~~~~~ir~f~ 151 (160)
+.. +..+.++.+|.
T Consensus 122 N~g~~~~l~~i~~~~ 136 (397)
T 2phl_A 122 NPDPKEDLRIIQLAM 136 (397)
T ss_dssp ECCSSCCEEEEEEEE
T ss_pred eCCCCCCeEEEEeec
Confidence 766 67899998875
No 85
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.60 E-value=2.4e-07 Score=79.78 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=58.7
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecC------CC-cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDE------SD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~------~~-~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
+.....|+|+ ..|+.||++|+|.+.+-+. ++ +.+...+++||+++||+|..|+..+++ .+.++.|+..
T Consensus 249 G~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~ 324 (397)
T 2phl_A 249 GALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGIN 324 (397)
T ss_dssp TEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEES
T ss_pred CcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECC
Confidence 3568899998 6899999999999999876 34 789999999999999999999998885 5777777654
No 86
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.59 E-value=1.4e-07 Score=83.62 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=65.8
Q ss_pred cCCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCc-------------------------
Q 031374 60 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ------------------------- 114 (160)
Q Consensus 60 ~gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~------------------------- 114 (160)
.|+. .-.++|.|. .+...|+|...|++||++|+|.+.+-..++.
T Consensus 46 ~gvs-~~r~~i~p~----------gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 46 AGVA-LSRLVLRRN----------ALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp HTCE-EEEEEECTT----------EEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred CcEE-EEEEEECCC----------CCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 4765 445677765 3568899999999999999999999864320
Q ss_pred ----------EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 115 ----------WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 115 ----------~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
.....+++||+|.||+|+.||+.++.+..+.++.+|..
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~ 162 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDT 162 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCC
Confidence 01268999999999999999999988889999988754
No 87
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.59 E-value=1.3e-07 Score=83.02 Aligned_cols=81 Identities=16% Similarity=0.254 Sum_probs=64.7
Q ss_pred CCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCC-cEE-----------------------
Q 031374 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESD-QWI----------------------- 116 (160)
Q Consensus 61 gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~-~~~----------------------- 116 (160)
|+... .++|.|. .+...|+|...|++||++|+|.+.+-..+. +-+
T Consensus 49 gvs~~-R~~i~P~----------gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~ 117 (465)
T 3qac_A 49 GVSVI-RRTIEPH----------GLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKF 117 (465)
T ss_dssp TCEEE-EEEECTT----------EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----------------------
T ss_pred ceEEE-EEEEcCC----------cCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccc
Confidence 76544 3566765 357899999999999999999999864321 111
Q ss_pred -------------EEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 117 -------------RIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 117 -------------~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
...+++||+|.||+|+.||+.++.+..+.++.+|..
T Consensus 118 ~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~ 166 (465)
T 3qac_A 118 GMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDT 166 (465)
T ss_dssp -------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECT
T ss_pred ccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcC
Confidence 358999999999999999999988899999988765
No 88
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.58 E-value=2.8e-07 Score=79.73 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=56.8
Q ss_pred CcccceecC-cceEEEEeeeeEEEEEecCCC--------------cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEE
Q 031374 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD--------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQ 148 (160)
Q Consensus 84 ~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~--------------~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir 148 (160)
.....|+|+ ..|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..|+..++ ..+.++.
T Consensus 260 ~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~ 337 (416)
T 1uij_A 260 ALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLA 337 (416)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEE
T ss_pred cEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEE
Confidence 557899998 689999999999999987654 36667999999999999999999888 3688888
Q ss_pred EecC
Q 031374 149 ILSY 152 (160)
Q Consensus 149 ~f~~ 152 (160)
||..
T Consensus 338 f~~~ 341 (416)
T 1uij_A 338 FGIN 341 (416)
T ss_dssp EEET
T ss_pred EEcC
Confidence 8754
No 89
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.58 E-value=5.1e-08 Score=68.09 Aligned_cols=63 Identities=16% Similarity=0.137 Sum_probs=51.5
Q ss_pred cccceecCc-ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 85 ~~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
....|.|.. .|+++|++|++.+...+ +..-.+.+++||.+.+|+|+.|+..+..+..+.+|.+
T Consensus 29 ~~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 29 ATGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp ECCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred ccCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 467999985 68888899999988764 3333567899999999999999999988888998876
No 90
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.54 E-value=8.4e-07 Score=78.42 Aligned_cols=69 Identities=14% Similarity=0.200 Sum_probs=58.8
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCC-CcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~-~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
+.....|||+ ..|+.||++|++.+.+-+.+ .+++.-.+++||+++||+|..|...++ +..+.++-||..
T Consensus 368 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s 438 (496)
T 3ksc_A 368 NAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTN 438 (496)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESS
T ss_pred CeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECC
Confidence 5678999997 57999999999999998765 457788899999999999999977666 566888888854
No 91
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.52 E-value=5.4e-07 Score=79.11 Aligned_cols=70 Identities=13% Similarity=0.228 Sum_probs=59.3
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCC
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYG 153 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (160)
+.....|||+ ..|+.||++|++++.+-+.++ +++.-.+++||+++||+|..|...++ +..+.++-+|...
T Consensus 333 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag-~e~~~~l~~f~s~ 404 (466)
T 3kgl_A 333 NAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRAT-SEQFRWIEFKTNA 404 (466)
T ss_dssp TEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSS
T ss_pred CcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEEcC-CCCEEEEEEECCC
Confidence 4668899997 579999999999999997754 57888999999999999999987655 4568888888763
No 92
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.51 E-value=2.5e-07 Score=74.48 Aligned_cols=55 Identities=13% Similarity=0.203 Sum_probs=48.1
Q ss_pred cCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
|..+|+.||++|++.+.++++ .+.+++||.+.+|+|++|++.+..+..++++.+.
T Consensus 79 ~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 79 EGIETFLYVISGNITAKAEGK-----TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp TTEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 346899999999999999988 9999999999999999999998776667666553
No 93
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.49 E-value=4.2e-07 Score=80.32 Aligned_cols=82 Identities=17% Similarity=0.246 Sum_probs=62.9
Q ss_pred cCCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCC-CcEE--------------------EE
Q 031374 60 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES-DQWI--------------------RI 118 (160)
Q Consensus 60 ~gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~-~~~~--------------------~~ 118 (160)
.|... -.++|.|. .+...|+|...||.||++|+|.+.+-..+ .+.+ ..
T Consensus 44 ~gvs~-~R~~i~pg----------gl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~ 112 (496)
T 3ksc_A 44 AGVAL-SRATLQRN----------ALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVN 112 (496)
T ss_dssp HTCEE-EEEEECTT----------EEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEE
T ss_pred CCceE-EEEEecCC----------CEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheee
Confidence 46543 34566664 35788999889999999999999995432 1211 23
Q ss_pred EEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 119 WIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 119 ~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
.+++||+|+||+|+.||..++.+..+.++.+|..
T Consensus 113 ~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~ 146 (496)
T 3ksc_A 113 RFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDI 146 (496)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccCCCCEEEECCCCcEEEEcCCCCCEEEEEEecc
Confidence 8999999999999999999988888999887754
No 94
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.48 E-value=5.2e-07 Score=78.45 Aligned_cols=67 Identities=18% Similarity=0.166 Sum_probs=56.0
Q ss_pred CcccceecC-cceEEEEeeeeEEEEEecCCC-------------cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 84 ~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~-------------~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.....|+|+ ..|+.||++|++.+.+-+.++ +.+.-.+++||+++||+|..|+..++ ..+.++.|
T Consensus 277 ~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f 354 (434)
T 2ea7_A 277 ALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAF 354 (434)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEE
T ss_pred eeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEE
Confidence 457899998 689999999999999986532 26666899999999999999999888 35888877
Q ss_pred ecC
Q 031374 150 LSY 152 (160)
Q Consensus 150 f~~ 152 (160)
|..
T Consensus 355 ~~~ 357 (434)
T 2ea7_A 355 GIN 357 (434)
T ss_dssp EET
T ss_pred ECC
Confidence 754
No 95
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.46 E-value=9.5e-07 Score=77.53 Aligned_cols=86 Identities=13% Similarity=0.203 Sum_probs=67.3
Q ss_pred eeeeeCCCcccCHHH----------HhcCcccceecC-cceEEEEeeeeEEEEEecCC-CcEEEEEEcCCcEEEeCCCCe
Q 031374 66 DLLDLCPEKVTNYEE----------KLKNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIY 133 (160)
Q Consensus 66 dvi~v~~~~~p~~~~----------~~~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~-~~~~~~~v~~GDli~iP~g~~ 133 (160)
.+..++...+|.... ..+.....|||+ ..|+.||++|++++.+-+.+ .+.+.-.+++||+++||.|..
T Consensus 306 ~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~ 385 (465)
T 3qac_A 306 RLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFA 385 (465)
T ss_dssp EEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCE
T ss_pred eEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcE
Confidence 445556556665543 124668899998 57999999999999998765 458888999999999999999
Q ss_pred eeeeeCCCCcEEEEEEecC
Q 031374 134 HRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 134 H~f~~~~~~~~~~ir~f~~ 152 (160)
|...++ +..+.++-||+.
T Consensus 386 h~~~ag-~e~~~~l~f~~s 403 (465)
T 3qac_A 386 IVKQAF-EDGFEWVSFKTS 403 (465)
T ss_dssp EEEEEE-EEEEEEEEEESS
T ss_pred EEEEcC-CCCeEEEEEecC
Confidence 987765 456888888864
No 96
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.45 E-value=8.9e-08 Score=71.32 Aligned_cols=74 Identities=11% Similarity=-0.057 Sum_probs=53.3
Q ss_pred eeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcE
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYV 144 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~ 144 (160)
..++.+.|+. .++.|.|...|.+|||+|+..+..++..+ ...+++||++.+|+|..|......+ .+
T Consensus 46 ~~~~~~~pG~----------~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e-~~ 111 (145)
T 2o1q_A 46 TAIFDCPAGS----------SFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPV-AS 111 (145)
T ss_dssp EEEEEECTTE----------EECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEE-EE
T ss_pred EEEEEECCCC----------CCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCC-Ce
Confidence 4567777653 46899999888899999999976654410 2789999999999999999432222 24
Q ss_pred EEEEEecC
Q 031374 145 KVMQILSY 152 (160)
Q Consensus 145 ~~ir~f~~ 152 (160)
.++.+|.+
T Consensus 112 ~~l~~~~g 119 (145)
T 2o1q_A 112 EFYMSFLG 119 (145)
T ss_dssp EEEEEEES
T ss_pred EEEEEECC
Confidence 55555544
No 97
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.45 E-value=4.3e-07 Score=73.73 Aligned_cols=54 Identities=11% Similarity=0.113 Sum_probs=47.5
Q ss_pred cCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
|..+|+.||++|++.+.++++ .+.+++||.+.+|+|++|++.+..+..++++-+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v 135 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDGQE-----THELEAGGYAYFTPEMKMYLANAQEADTEVFLY 135 (274)
T ss_dssp TTEEEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTSCCEEEESSSSCEEEEEE
T ss_pred CCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 346899999999999999988 999999999999999999999877666666544
No 98
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.42 E-value=2.1e-07 Score=65.18 Aligned_cols=62 Identities=15% Similarity=0.129 Sum_probs=47.9
Q ss_pred ccceecCc-ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 86 YTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 86 ~~~H~H~~-~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
..+|.|.. .++.++++|++.+... +++...+.+++||.+.+|+|..|++.+.++..+.+|.+
T Consensus 30 ~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 57999985 4666677888887764 33322478999999999999999999988888887765
No 99
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.40 E-value=8.6e-07 Score=75.75 Aligned_cols=53 Identities=17% Similarity=0.257 Sum_probs=48.9
Q ss_pred cCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
+.....|.|...+|++|++|+|++.|+++ ++.+++||+++||++..|++.+++
T Consensus 289 G~~t~~hRht~s~Vy~V~eG~G~~~I~~~-----~~~w~~gD~fvvP~w~~h~~~n~~ 341 (368)
T 3nw4_A 289 GTETATRNEVGSTVFQVFEGAGAVVMNGE-----TTKLEKGDMFVVPSWVPWSLQAET 341 (368)
T ss_dssp TCBCCCEEESSCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEESS
T ss_pred CCccCCeeccccEEEEEEeCcEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCC
Confidence 34568999999999999999999999988 999999999999999999998874
No 100
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.37 E-value=1.5e-06 Score=75.30 Aligned_cols=66 Identities=14% Similarity=0.249 Sum_probs=54.1
Q ss_pred CcccceecC-cceEEEEeeeeEEEEEecCCC-------------------------cEEEEEEcCCcEEEeCCCCeeeee
Q 031374 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-------------------------QWIRIWIKAGDLIVLPAGIYHRFT 137 (160)
Q Consensus 84 ~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~-------------------------~~~~~~v~~GDli~iP~g~~H~f~ 137 (160)
.....|+|+ ..|+.||++|+|.+.+-+.++ +.+...+++||+++||+|.+|+..
T Consensus 274 g~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~ 353 (418)
T 3s7i_A 274 ALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAIN 353 (418)
T ss_dssp EEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEE
T ss_pred ceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEE
Confidence 457889996 689999999999998875432 577899999999999999999988
Q ss_pred eCCCCcEEEEEEec
Q 031374 138 LDTSNYVKVMQILS 151 (160)
Q Consensus 138 ~~~~~~~~~ir~f~ 151 (160)
+++ + +..+-|+.
T Consensus 354 ~~~-~-l~~v~f~~ 365 (418)
T 3s7i_A 354 ASS-E-LHLLGFGI 365 (418)
T ss_dssp ESS-C-EEEEEEEE
T ss_pred CCC-C-EEEEEEEc
Confidence 765 3 76666653
No 101
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.35 E-value=6.6e-07 Score=73.37 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=52.9
Q ss_pred eeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEe-cCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~-~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
.-++++.|+. ....|.|..+|+.||++|++.+.++ ++ .+.+++||.+.+|+|..|++.+.+ .
T Consensus 72 ~~lv~l~PGg----------~s~~~~h~~EEfiyVleG~l~l~l~~g~-----~~~L~~Gds~y~p~~~~H~~~N~~--~ 134 (266)
T 4e2q_A 72 MYLAKMKEMS----------SSGLPPQDIERLIFVVEGAVTLTNTSSS-----SKKLTVDSYAYLPPNFHHSLDCVE--S 134 (266)
T ss_dssp EEEEEECSSE----------ECCCCCTTEEEEEEEEEECEEEEC--CC-----CEEECTTEEEEECTTCCCEEEESS--C
T ss_pred EEEEEECcCC----------cCCCCCCCCeEEEEEEEEEEEEEECCCc-----EEEEcCCCEEEECCCCCEEEEeCC--C
Confidence 4466777753 1245788899999999999999998 78 899999999999999999999864 3
Q ss_pred EEEE
Q 031374 144 VKVM 147 (160)
Q Consensus 144 ~~~i 147 (160)
.+++
T Consensus 135 Ar~l 138 (266)
T 4e2q_A 135 ATLV 138 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 102
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.33 E-value=3.2e-06 Score=73.72 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=56.3
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCCC---------c--EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD---------Q--WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~---------~--~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
+.....|+|+ ..|+.||++|++++.+-+.++ + .+...+++||+++||.|..|...++ + .+.++-|+
T Consensus 291 g~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~-~~~~v~f~ 368 (445)
T 2cav_A 291 GALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-S-DLNMVGIG 368 (445)
T ss_dssp TEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-S-SEEEEEEE
T ss_pred CceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-C-CeEEEEEE
Confidence 4568899997 689999999999999987653 3 6899999999999999999998888 3 47777776
Q ss_pred cC
Q 031374 151 SY 152 (160)
Q Consensus 151 ~~ 152 (160)
+.
T Consensus 369 ~~ 370 (445)
T 2cav_A 369 VN 370 (445)
T ss_dssp ES
T ss_pred cc
Confidence 43
No 103
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.26 E-value=2.7e-06 Score=74.71 Aligned_cols=81 Identities=16% Similarity=0.266 Sum_probs=62.5
Q ss_pred CCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCc-EE-----------------------
Q 031374 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ-WI----------------------- 116 (160)
Q Consensus 61 gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~-~~----------------------- 116 (160)
||.. -.+++.|. .+...|+|+..|++||++|+|++.+-..+.. -+
T Consensus 42 gvs~-~r~~i~p~----------Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~ 110 (466)
T 3kgl_A 42 GVSF-VRYIIESK----------GLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQ 110 (466)
T ss_dssp TEEE-EEEEECTT----------EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-------------
T ss_pred CeEE-EEEEECCC----------CEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccc
Confidence 7653 34566654 4678999999999999999999887643110 00
Q ss_pred -----------------------------------EEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 117 -----------------------------------RIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 117 -----------------------------------~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
...+++||+|.||||+.||..++.+..+.++.++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 111 GQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDL 181 (466)
T ss_dssp ----------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred ccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcC
Confidence 148899999999999999999988888999888743
No 104
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=98.25 E-value=1.8e-06 Score=68.91 Aligned_cols=53 Identities=15% Similarity=0.221 Sum_probs=45.3
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
..+..|+|++.|+.||++|+|. .+++... ..+.+++||++++|||..|.+...
T Consensus 20 ~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~--~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 20 YIFNNLYINDYKMFWIDSGIAK-LIDKNCL--VSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEEEECSSCEEEEESSSCEE-EEETTTT--EEEEECTTEEEEECTTCEEEEEEE
T ss_pred hhccHhhhcceEEEEEecCceE-EECCccc--eeEEEcCCCEEEEcCCCceeeccc
Confidence 4578899999999999999999 9985411 137899999999999999998765
No 105
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.25 E-value=4.2e-06 Score=69.03 Aligned_cols=57 Identities=25% Similarity=0.323 Sum_probs=48.0
Q ss_pred cccceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 85 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 85 ~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
-+.+| |+ .+|++|+++|.....+.+. ++--.+.+++||++++|+|++|+-...++..
T Consensus 43 R~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~et~ 100 (286)
T 2qnk_A 43 RKDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFANTV 100 (286)
T ss_dssp CCCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECTTCE
T ss_pred CccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccCCeE
Confidence 36789 75 6999999999999999963 5555799999999999999999988765433
No 106
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.21 E-value=2.3e-06 Score=66.72 Aligned_cols=58 Identities=19% Similarity=0.175 Sum_probs=47.5
Q ss_pred cCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
+..++.|.|...|+.|||+|+.. ++ .-.+.+||++.+|+|..|...++....+.++.+
T Consensus 135 G~~~p~H~H~g~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 135 GQAVPDHGHRGLELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp TCBCCCCCCSSCEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred CCCCCCcCCCCeEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 45689999999999999999843 44 357889999999999999999875566776654
No 107
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.18 E-value=6.6e-06 Score=71.26 Aligned_cols=64 Identities=11% Similarity=0.201 Sum_probs=50.2
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeee-CCCCcEEEEE
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTL-DTSNYVKVMQ 148 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~-~~~~~~~~ir 148 (160)
.+...|+....||+||++|+|...+-+. +......+++||+++||+|+.||..+ +++..+.++.
T Consensus 55 gl~~Phh~~A~ei~yV~~G~g~~g~V~~-~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~ 119 (418)
T 3s7i_A 55 TLVLPKHADADNILVIQQGQATVTVANG-NNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAK 119 (418)
T ss_dssp EEEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEE
T ss_pred ceeeeeeCCCCeEEEEEEeeEEEEEEec-CCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEE
Confidence 3466773357899999999999999765 34457899999999999999999887 4445666554
No 108
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.13 E-value=4.2e-06 Score=67.00 Aligned_cols=42 Identities=26% Similarity=0.332 Sum_probs=40.3
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
.+|+.||++|++.+.++++ .+.+++||.+.+|+|+.|++.+.
T Consensus 68 ~ee~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp SEEEEEEEEEEEEEECSSC-----EEEECTTEEEEECTTCCCEEEEE
T ss_pred eeEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeC
Confidence 7899999999999999988 99999999999999999999886
No 109
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.10 E-value=4.6e-06 Score=63.27 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=52.7
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeC--CC
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD--TS 141 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~--~~ 141 (160)
..-++.+.|+ ..++.|.|...|..|||+|+..|+ +. + ..+++||++..|+|..|...+. ..
T Consensus 43 ~v~lvr~~pG----------~~~p~H~H~g~ee~~VL~G~~~~~--e~-~----~~~~~Gd~~~~P~g~~H~~~~~~~~~ 105 (159)
T 3ebr_A 43 TITLLKAPAG----------MEMPRHHHTGTVIVYTVQGSWRYK--EH-D----WVAHAGSVVYETASTRHTPQSAYAEG 105 (159)
T ss_dssp EEEEEEECSS----------CBCCCEEESSCEEEEEEESCEEET--TS-S----CCBCTTCEEEECSSEEECEEESSSSS
T ss_pred EEEEEEECCC----------CCcccccCCCCEEEEEEEeEEEEe--CC-C----eEECCCeEEEECCCCcceeEeCCCCC
Confidence 4456777765 347899999999999999998874 22 2 4788999999999999999887 44
Q ss_pred CcEEEEE
Q 031374 142 NYVKVMQ 148 (160)
Q Consensus 142 ~~~~~ir 148 (160)
..+.++.
T Consensus 106 e~~~~~~ 112 (159)
T 3ebr_A 106 PDIITFN 112 (159)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 5665554
No 110
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.02 E-value=8e-06 Score=63.16 Aligned_cols=59 Identities=25% Similarity=0.409 Sum_probs=46.2
Q ss_pred cCcccceecCc-------ceEEEEeeeeEEEEEecCCC----------------cEEEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 83 KNFYTEHIHAD-------EEIRYCLEGSGYFDVRDESD----------------QWIRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 83 ~~~~~~H~H~~-------~Ei~yvl~G~g~f~i~~~~~----------------~~~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
++..++|.|.. .|-++|+.|.+++.+.+..- -+-.+.++|||.+.||+|++|+|.++
T Consensus 63 GQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~ag 142 (175)
T 2y0o_A 63 GQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAG 142 (175)
T ss_dssp TCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEE
T ss_pred CCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeC
Confidence 35578999975 57777999999999975420 02357999999999999999999984
Q ss_pred CC
Q 031374 140 TS 141 (160)
Q Consensus 140 ~~ 141 (160)
+.
T Consensus 143 ee 144 (175)
T 2y0o_A 143 EE 144 (175)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 111
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=98.01 E-value=1.9e-05 Score=57.26 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=40.6
Q ss_pred ceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 88 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 88 ~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
.+.+..+|+.|||+|++.+...+.. .+.+++||++++|+|..-..+..+
T Consensus 56 ~~~~~~~E~~~iLeG~~~lt~ddG~----~~~l~aGD~~~~P~G~~gtWev~e 104 (116)
T 3es4_A 56 YAGRDLEETFVVVEGEALYSQADAD----PVKIGPGSIVSIAKGVPSRLEILS 104 (116)
T ss_dssp ECCCSEEEEEEEEECCEEEEETTCC----CEEECTTEEEEECTTCCEEEEECS
T ss_pred CeeCCCcEEEEEEEeEEEEEeCCCe----EEEECCCCEEEECCCCeEEEEEeE
Confidence 4445567999999999999987532 789999999999999998877655
No 112
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.89 E-value=1.3e-05 Score=61.11 Aligned_cols=60 Identities=20% Similarity=0.294 Sum_probs=46.9
Q ss_pred eeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 65 ~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
.-++.+.|+ ..++.|.|...|..|||+|+..+. +.. ...+++||.+.+|+|..|.....+
T Consensus 45 v~lvr~~pG----------~~~p~H~H~g~ee~~VL~G~f~~~--~~~----~~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 45 VMRASFAPG----------LTLPLHFHTGTVHMYTISGCWYYT--EYP----GQKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEECTT----------CBCCEEEESSCEEEEEEESEEEET--TCT----TSCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEECCC----------CcCCcccCCCCEEEEEEEEEEEEC--CCc----eEEECCCeEEEeCCCCceeeEeCC
Confidence 456666654 347899999999999999998873 211 256789999999999999988744
No 113
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.86 E-value=4.7e-05 Score=61.44 Aligned_cols=53 Identities=13% Similarity=0.129 Sum_probs=44.1
Q ss_pred cCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEE
Q 031374 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQ 148 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir 148 (160)
++.+|+.|||+|+.....+++ .+.+++||+++||+|+.+.+...+.-....++
T Consensus 63 ~p~dE~~~VleG~~~lt~~g~-----~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~ 115 (238)
T 3myx_A 63 YPYTEMLVMHRGSVTLTSGTD-----SVTLSTGESAVIGRGTQVRIDAQPESLWAFCA 115 (238)
T ss_dssp CSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECTTEEEEEEE
T ss_pred CCCcEEEEEEEeEEEEECCCe-----EEEEcCCCEEEECCCCEEEEEecCCeEEEEEe
Confidence 445899999999999988766 89999999999999999999887754333333
No 114
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.86 E-value=7.7e-05 Score=61.49 Aligned_cols=69 Identities=16% Similarity=0.242 Sum_probs=54.9
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCC-CcEEEEEE--cCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWI--KAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~-~~~~~~~v--~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
+.....|+|. ..|.++|++|++.+.+++.. ++|+.+.+ +..+.+.||+|..|.+.+.++..+.+|-+-.
T Consensus 282 g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~~~ 354 (369)
T 3st7_A 282 GITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVN 354 (369)
T ss_dssp TCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEEES
T ss_pred CceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEecC
Confidence 3456889997 67999999999999998653 56777776 3449999999999999987766777775543
No 115
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.84 E-value=3.8e-05 Score=68.28 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=29.5
Q ss_pred EEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 118 IWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 118 ~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
..+++||+|.||+|+.||.+++.+..+.++.++
T Consensus 174 ~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~ 206 (531)
T 3fz3_A 174 RRIREGDVVAIPAGVAYWSYNDGDQELVAVNLF 206 (531)
T ss_dssp EEEETTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred ecccCCcEEEECCCCeEEEEeCCCceEEEEEEE
Confidence 467999999999999999999988888888765
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.64 E-value=0.00011 Score=58.54 Aligned_cols=55 Identities=22% Similarity=0.215 Sum_probs=44.3
Q ss_pred eeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 66 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 66 dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
-++.+.|+ ..++.|.|...|..|||+|+.. +. .-.+.+||++.+|+|..|...+.
T Consensus 46 ~lvr~~pG----------~~~p~H~H~g~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~~H~p~a~ 100 (223)
T 3o14_A 46 SIVRYAPG----------SRFSAHTHDGGEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTTSHVPGSA 100 (223)
T ss_dssp EEEEECTT----------EECCCEECTTCEEEEEEEEEEE----ET-----TEEEETTEEEEECTTCEECCEES
T ss_pred EEEEECCC----------CCcccccCCCCEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCCccccEeC
Confidence 45666664 3578999999999999999964 23 35788999999999999998773
No 117
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.25 E-value=0.002 Score=47.86 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=44.5
Q ss_pred CcccceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcE-EEeCCCCeeeeeeCCCC
Q 031374 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDL-IVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 84 ~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDl-i~iP~g~~H~f~~~~~~ 142 (160)
....+|.|. ..|++++++|++.+.+.+... --++.+.+.+. |.||||+.|.+..-+..
T Consensus 46 ~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~-~~~~~L~~~~~gL~IppgvWh~~~~~s~~ 105 (141)
T 2pa7_A 46 EPRGFHAHKKLEQVLVCLNGSCRVILDDGNI-IQEITLDSPAVGLYVGPAVWHEMHDFSSD 105 (141)
T ss_dssp CCEEEEEESSCCEEEEEEESCEEEEEECSSC-EEEEEECCTTEEEEECTTCEEEEECCCTT
T ss_pred CEECcCcCCCceEEEEEEccEEEEEEECCcE-EEEEEECCCCcEEEeCCCEEEEEEEcCCC
Confidence 446789996 689999999999999975332 23556655555 99999999999876554
No 118
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.21 E-value=0.00033 Score=52.95 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=46.6
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeee
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFT 137 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~ 137 (160)
..-++.+.++ ..+..|+|+..|.+|||+|+..+.-++..+ .-.+++|+++..|+|..|...
T Consensus 47 ~t~lvr~~pG----------~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~---~~~~~aGsYv~ePpGs~H~p~ 107 (153)
T 3bal_A 47 WTAIFNCPAG----------SSFASHIHAGPGEYFLTKGKMEVRGGEQEG---GSTAYAPSYGFESSGALHGKT 107 (153)
T ss_dssp EEEEEEECTT----------EEECCEEESSCEEEEEEESEEEETTCGGGT---SEEEESSEEEEECTTCEESCC
T ss_pred EEEEEEeCCC----------CCccCccCCCCEEEEEEEEEEEecCccccC---ccccCCCeEEEcCCCCcccce
Confidence 4456666654 458999999999999999999876554312 245589999999999999843
No 119
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.16 E-value=0.0011 Score=53.33 Aligned_cols=46 Identities=20% Similarity=0.338 Sum_probs=38.7
Q ss_pred cCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
|..+|+.|||+|++.+...+.. .+.+++||++++|+|..=..+..+
T Consensus 184 ~~~~E~~~ILeG~v~lt~~~G~----~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 184 HKIHELMNLIEGRVVLSLENGS----SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp CSSCEEEEEEECCEEEEETTSC----EEEECTTCEEEECTTCEEEEEESS
T ss_pred CCCCEEEEEEEeEEEEEeCCCC----EEEECCCCEEEECCCCEEEEEECc
Confidence 4678999999999999886432 799999999999999988777654
No 120
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.91 E-value=0.0094 Score=45.71 Aligned_cols=67 Identities=10% Similarity=0.082 Sum_probs=52.1
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecC-C-----CcEEEEEEc---CCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDE-S-----DQWIRIWIK---AGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~-~-----~~~~~~~v~---~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
+.....|.|. ..++.+|++|++...+.|. . ++|..+.+. ++-.|.||+|..|.|..-++....++-+
T Consensus 63 GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 63 RRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 4556889986 7899999999999988543 1 569999998 5678999999999999766534444433
No 121
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.87 E-value=0.0053 Score=48.03 Aligned_cols=60 Identities=15% Similarity=0.092 Sum_probs=48.7
Q ss_pred cCcccceecCcceEEEEee-eeEEEEEecCC-----CcEEEEEEcCCcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIHADEEIRYCLE-GSGYFDVRDES-----DQWIRIWIKAGDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~-G~g~f~i~~~~-----~~~~~~~v~~GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.|....+..|++ |+..--+-|.. ++|..+.+.++-.|.||+|..|.|..-+++
T Consensus 70 GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 70 NVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp TBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred CCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 4566889999999999999 99543333233 679999999999999999999999876654
No 122
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.80 E-value=0.004 Score=51.30 Aligned_cols=49 Identities=16% Similarity=0.273 Sum_probs=42.9
Q ss_pred ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 94 EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 94 ~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
+-.+++++|+..+.++++ .+.+++||.|+||||+.|.....++. +++.+
T Consensus 227 d~wiWqLEGss~Vt~~~q-----~~~L~~~DsLLIpa~~~y~~~r~~gs--v~L~I 275 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMGGR-----RLSLAPDDSLLVLAGTSYAWERTQGS--VALSV 275 (286)
T ss_dssp CEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEECTTC--EEEEE
T ss_pred cEEEEEEcCceEEEECCe-----EEeccCCCEEEecCCCeEEEEecCCe--EEEEE
Confidence 788999999999999988 99999999999999999999887654 44444
No 123
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.80 E-value=0.0073 Score=46.71 Aligned_cols=60 Identities=17% Similarity=0.374 Sum_probs=47.0
Q ss_pred cCcccceec---CcceEEEEeeeeEE---EEEecCC---CcEEEEEEcC--CcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIH---ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H---~~~Ei~yvl~G~g~---f~i~~~~---~~~~~~~v~~--GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.| ...++.+|++|++. ++++... ++|..+.+.+ +-.|.||+|..|.|..-+++
T Consensus 58 GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 58 GVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 455678888 57899999999975 4444211 5799999976 58899999999999876655
No 124
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.72 E-value=0.0064 Score=47.88 Aligned_cols=60 Identities=20% Similarity=0.375 Sum_probs=47.7
Q ss_pred cCcccceecC----cceEEEEeeeeE---EEEEecCC---CcEEEEEEcC--CcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIHA----DEEIRYCLEGSG---YFDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H~----~~Ei~yvl~G~g---~f~i~~~~---~~~~~~~v~~--GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.|. ..++..|++|+. .++++... ++|..+.+.+ +-.|.||+|..|.|.+-+++
T Consensus 80 GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 80 GTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp TBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred CcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 4556788884 789999999997 55555332 6799999986 78999999999999876654
No 125
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.67 E-value=0.01 Score=45.81 Aligned_cols=60 Identities=23% Similarity=0.362 Sum_probs=46.8
Q ss_pred cCcccceec---CcceEEEEeeeeEE---EEEecCC---CcEEEEEEcC--CcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIH---ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H---~~~Ei~yvl~G~g~---f~i~~~~---~~~~~~~v~~--GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.| ....+..|++|+.. ++++... ++|..+.+.+ +..|.||+|..|.|..-+++
T Consensus 59 GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 59 GVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 455678888 57899999999975 4444211 5799999887 58899999999999877655
No 126
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.52 E-value=0.015 Score=44.89 Aligned_cols=60 Identities=25% Similarity=0.477 Sum_probs=46.2
Q ss_pred cCcccceec----CcceEEEEeeeeEE---EEEecCC---CcEEEEEEcC--CcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIH----ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H----~~~Ei~yvl~G~g~---f~i~~~~---~~~~~~~v~~--GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.| ....+.+|++|+.. ++++... ++|..+.+.+ +-.|.||+|..|.|..-+++
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 57 NVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp TBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 455678888 46899999999975 4444211 5699999887 57899999999999876655
No 127
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=96.33 E-value=0.0085 Score=52.43 Aligned_cols=57 Identities=5% Similarity=0.113 Sum_probs=47.4
Q ss_pred cCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
.+.++++++.+|++.+.-.-. .+.+++||+++||.|+.++..+.+..+..++-.|..
T Consensus 176 aDGD~Livpq~G~l~i~TEfG-----~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~g~ 232 (471)
T 1eyb_A 176 SDGDFLIVPQKGNLLIYTEFG-----KMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYGV 232 (471)
T ss_dssp SSEEEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEECSSSEEEEEEEEESC
T ss_pred CCCCEEEEEEeCCEEEEEecc-----cEEeccCCEEEECCccEEEEeeCCCceEEEEEccCC
Confidence 357999999999999998866 899999999999999999999866445556655554
No 128
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.23 E-value=0.03 Score=43.95 Aligned_cols=60 Identities=18% Similarity=0.341 Sum_probs=46.2
Q ss_pred cCcccceecC----cceEEEEeeeeEE-EEEecCC-----CcEEEEEEcC--CcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIHA----DEEIRYCLEGSGY-FDVRDES-----DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H~----~~Ei~yvl~G~g~-f~i~~~~-----~~~~~~~v~~--GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.|. ...+.+|++|+.. +-++... ++|..+.+.+ +-.|.||+|..|.|..-+++
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 57 GVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred CeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 4556788885 6899999999975 3332222 5699999987 47899999999999876665
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=96.20 E-value=0.022 Score=46.04 Aligned_cols=65 Identities=11% Similarity=0.170 Sum_probs=51.1
Q ss_pred cccceecCcce-EEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCC--Ceeeeee-CCCCcEEEEEEecCC
Q 031374 85 FYTEHIHADEE-IRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG--IYHRFTL-DTSNYVKVMQILSYG 153 (160)
Q Consensus 85 ~~~~H~H~~~E-i~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g--~~H~f~~-~~~~~~~~ir~f~~~ 153 (160)
-+..|-|...| |.|+++|+....-...+ .-.+++||+-...|| +.|+-.+ .+...+..+.++..-
T Consensus 76 gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn----~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~l 144 (256)
T 2vec_A 76 AFQPRTYPKVDILNVILDGEAEYRDSEGN----HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDA 144 (256)
T ss_dssp EEEEECCSSEEEEEEEEESEEEEEETTSC----EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEEC
T ss_pred ccCCcCCCCcEEEEEEEeeEEEEEeCCCC----EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEeC
Confidence 36899998655 89999999988766322 788999999999665 7999665 444689999988653
No 130
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=96.18 E-value=0.039 Score=42.20 Aligned_cols=60 Identities=13% Similarity=0.252 Sum_probs=45.9
Q ss_pred CcccceecCcceEEEEeeeeE-EEEEecCCCcEEEEE----EcCCcE--EEeCCCCeeeeeeCCCCc
Q 031374 84 NFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIW----IKAGDL--IVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g-~f~i~~~~~~~~~~~----v~~GDl--i~iP~g~~H~f~~~~~~~ 143 (160)
.+..+|....+||.|+..|.+ .+.+-..+++..++. +.+|+. ++||+|+.+.....++.+
T Consensus 60 ~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g~~ 126 (170)
T 1yud_A 60 EVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQDGF 126 (170)
T ss_dssp CCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSSSE
T ss_pred CCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCCCc
Confidence 345677778999999999987 777765566655555 567898 999999999988764444
No 131
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.15 E-value=0.03 Score=44.34 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=46.7
Q ss_pred cCcccceecC----cceEEEEeeeeEE---EEEecC---CCcEEEEEEcCC--cEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIHA----DEEIRYCLEGSGY---FDVRDE---SDQWIRIWIKAG--DLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H~----~~Ei~yvl~G~g~---f~i~~~---~~~~~~~~v~~G--Dli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.|. ...+.+|++|++. ++++.. -++|..+.+.+. ..|.||+|..|.|..-+++
T Consensus 65 GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 65 GVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 4556788885 6899999999975 444422 157999999875 7899999999999876655
No 132
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.10 E-value=0.03 Score=43.71 Aligned_cols=60 Identities=13% Similarity=0.195 Sum_probs=46.7
Q ss_pred cCcccceecC----cceEEEEeeeeEEE-EEecCC-----CcEEEEEEcC--CcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIHA----DEEIRYCLEGSGYF-DVRDES-----DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H~----~~Ei~yvl~G~g~f-~i~~~~-----~~~~~~~v~~--GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.|. ...+.+|++|++.. .++... ++|..+.+.+ +..|.||+|..|.|..-+++
T Consensus 75 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 75 GVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp TBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred CcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 5566789885 58999999999843 333322 4699999986 68899999999999876653
No 133
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=95.98 E-value=0.095 Score=38.27 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=50.1
Q ss_pred cCcccce----ecC-cceEEEEeeeeEEEEEecCCCc---EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 83 KNFYTEH----IHA-DEEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 83 ~~~~~~H----~H~-~~Ei~yvl~G~g~f~i~~~~~~---~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
+.+...| +|. .-+.+-|++|+..|..-+.++. --.+...+|+..+|||+..|+...-+++-..-|.||..
T Consensus 24 ~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc~ 101 (127)
T 3bb6_A 24 AGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVA 101 (127)
T ss_dssp GGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEEC
T ss_pred HHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEeC
Confidence 5667778 476 4699999999999885333222 23577889999999999999999754433333666653
No 134
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=95.97 E-value=0.044 Score=43.62 Aligned_cols=60 Identities=18% Similarity=0.304 Sum_probs=46.1
Q ss_pred cCcccceecC----cceEEEEeeeeEE-EEEecCC-----CcEEEEEEcCC--cEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIHA----DEEIRYCLEGSGY-FDVRDES-----DQWIRIWIKAG--DLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H~----~~Ei~yvl~G~g~-f~i~~~~-----~~~~~~~v~~G--Dli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.|. ...+.+|++|++. +-++... ++|..+.+.+. ..|.||+|..|.|..-+++
T Consensus 76 GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 76 GVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred CeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 4556788885 5899999999975 3332222 46999999874 7899999999999876655
No 135
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=95.97 E-value=0.037 Score=44.25 Aligned_cols=66 Identities=23% Similarity=0.284 Sum_probs=51.3
Q ss_pred cccceecCcc-eEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCC--Ceeeeee-CCCCcEEEEEEecCCcc
Q 031374 85 FYTEHIHADE-EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG--IYHRFTL-DTSNYVKVMQILSYGVQ 155 (160)
Q Consensus 85 ~~~~H~H~~~-Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g--~~H~f~~-~~~~~~~~ir~f~~~p~ 155 (160)
-+..|-|... .|.|+++|+....-...+ .-.+++||+-...|| +.|+-.+ .+...+..+.++. .|.
T Consensus 53 gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn----~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv-~P~ 122 (242)
T 1tq5_A 53 GFGTHPHKDMEILTYVLEGTVEHQDSMGN----KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWI-MPE 122 (242)
T ss_dssp EEEEEEECSCEEEEEEEESEEEEEESSSC----EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEE-CCS
T ss_pred cCCCcCCCCcEEEEEEEEeEEEEEeCCCC----cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEE-cch
Confidence 3689999864 599999999988766322 788999999999555 9999665 4457899999987 364
No 136
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=95.83 E-value=0.046 Score=42.71 Aligned_cols=70 Identities=14% Similarity=0.090 Sum_probs=52.6
Q ss_pred cCcccceecCcceEEEEeeeeEEEEEec--CCCcEE----EEEEcCCcEEEeCC--CCeeeeeeC-CCCcEEEEEEecC
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDVRD--ESDQWI----RIWIKAGDLIVLPA--GIYHRFTLD-TSNYVKVMQILSY 152 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i~~--~~~~~~----~~~v~~GDli~iP~--g~~H~f~~~-~~~~~~~ir~f~~ 152 (160)
++..+.|-|....+++|++|+..-.+-. .++..+ +..+.+|+.+.+++ |..|+..+. .......|-+|..
T Consensus 89 Gq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~ 167 (208)
T 2gm6_A 89 GQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGA 167 (208)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESS
T ss_pred CcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcC
Confidence 4667899998899999999988765521 122222 57899999999999 999999865 4556777777754
No 137
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=95.64 E-value=0.083 Score=40.14 Aligned_cols=69 Identities=17% Similarity=0.243 Sum_probs=50.7
Q ss_pred CcccceecCc-ceEEEEeeeeEEEEEecC-CCc---EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 84 NFYTEHIHAD-EEIRYCLEGSGYFDVRDE-SDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 84 ~~~~~H~H~~-~Ei~yvl~G~g~f~i~~~-~~~---~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
+....|-|.. ..+++|++|+....+-.. ++. .-+..+.+||.++.|++-.|++.+........|-+|..
T Consensus 80 q~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~p 153 (171)
T 3eqe_A 80 KETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSP 153 (171)
T ss_dssp CBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred CCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCC
Confidence 4567899985 788889999998764211 111 12577899999999999999998766666666666553
No 138
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=95.44 E-value=0.048 Score=43.90 Aligned_cols=59 Identities=22% Similarity=0.283 Sum_probs=42.9
Q ss_pred cCcccceecC-cceEEEEeee---eEEEEEecCC-------------CcE------EEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 83 KNFYTEHIHA-DEEIRYCLEG---SGYFDVRDES-------------DQW------IRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G---~g~f~i~~~~-------------~~~------~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
++..+.|.|. -.|-+.+.-| ..++...+.+ +.. =.+.++||+-|.||||++|+|.+.
T Consensus 116 gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae 195 (246)
T 3kmh_A 116 AQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAE 195 (246)
T ss_dssp TCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEEC
T ss_pred CCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEec
Confidence 3567899997 4788888777 4444444322 111 146889999999999999999998
Q ss_pred CC
Q 031374 140 TS 141 (160)
Q Consensus 140 ~~ 141 (160)
++
T Consensus 196 ~g 197 (246)
T 3kmh_A 196 AG 197 (246)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 139
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.39 E-value=0.095 Score=41.04 Aligned_cols=60 Identities=22% Similarity=0.310 Sum_probs=46.0
Q ss_pred cCcccceecC----cceEEEEeeeeEEEEEec---CC---CcEEEEEEcC--CcEEEeCCCCeeeeeeCCCC
Q 031374 83 KNFYTEHIHA----DEEIRYCLEGSGYFDVRD---ES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 83 ~~~~~~H~H~----~~Ei~yvl~G~g~f~i~~---~~---~~~~~~~v~~--GDli~iP~g~~H~f~~~~~~ 142 (160)
+.....|.|. ...+.+|+.|+..--+-| .. ++|..+.+.+ +-.|.||+|..|.|..-+++
T Consensus 54 GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 54 GALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp TBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT
T ss_pred CceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC
Confidence 4566788874 789999999997433322 11 6799988886 78899999999999876654
No 140
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=95.09 E-value=0.062 Score=40.96 Aligned_cols=53 Identities=11% Similarity=0.299 Sum_probs=40.0
Q ss_pred ceecCcceEEEEeeeeEEEEEecCC----------------------------------CcEEEEEEcCCcEEEeCCCCe
Q 031374 88 EHIHADEEIRYCLEGSGYFDVRDES----------------------------------DQWIRIWIKAGDLIVLPAGIY 133 (160)
Q Consensus 88 ~H~H~~~Ei~yvl~G~g~f~i~~~~----------------------------------~~~~~~~v~~GDli~iP~g~~ 133 (160)
.|.-..+=+...+.|+=.+.+-... -+.+++.++|||+|+||+|-.
T Consensus 139 ~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~ 218 (235)
T 4gjz_A 139 LHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYW 218 (235)
T ss_dssp EECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCE
T ss_pred eeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCc
Confidence 3444456677788999999884211 135789999999999999999
Q ss_pred eeeeeCC
Q 031374 134 HRFTLDT 140 (160)
Q Consensus 134 H~f~~~~ 140 (160)
|...+.+
T Consensus 219 H~V~~l~ 225 (235)
T 4gjz_A 219 HYVRALD 225 (235)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9988654
No 141
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=94.85 E-value=0.032 Score=44.12 Aligned_cols=49 Identities=16% Similarity=0.112 Sum_probs=38.8
Q ss_pred CcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCC
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSN 142 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~ 142 (160)
..+..|.|..+|+ +||+|+.. +. .-.+.+|+.|-+|+|..|...++++.
T Consensus 157 ~~~~~~~hgG~Ei-lVL~G~~~----d~-----~~~~~~GsWlR~P~gs~h~~~ag~~g 205 (223)
T 3o14_A 157 ANLTSEAAGGIEV-LVLDGDVT----VN-----DEVLGRNAWLRLPEGEALSATAGARG 205 (223)
T ss_dssp CEEEECCSSCEEE-EEEEEEEE----ET-----TEEECTTEEEEECTTCCEEEEEEEEE
T ss_pred CccCCCCCCcEEE-EEEEeEEE----EC-----CceECCCeEEEeCCCCccCcEECCCC
Confidence 4578899977887 99999953 23 35788999999999999998885443
No 142
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=94.76 E-value=0.16 Score=42.29 Aligned_cols=71 Identities=14% Similarity=0.281 Sum_probs=49.8
Q ss_pred CcccceecCcceEEEEeeeeEEEEEe-cCC---------------------------------CcEEEEEEcCCcEEEeC
Q 031374 84 NFYTEHIHADEEIRYCLEGSGYFDVR-DES---------------------------------DQWIRIWIKAGDLIVLP 129 (160)
Q Consensus 84 ~~~~~H~H~~~Ei~yvl~G~g~f~i~-~~~---------------------------------~~~~~~~v~~GDli~iP 129 (160)
.-...|.-..+=+...+.|+=.+.+- ..+ ...+.+.++|||+|.||
T Consensus 152 ~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP 231 (342)
T 1vrb_A 152 GGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLP 231 (342)
T ss_dssp CCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEEC
T ss_pred CCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeC
Confidence 34567887677777788999888887 211 12478999999999999
Q ss_pred CCCeeeeeeCCCCcEEEEEEecCCccc
Q 031374 130 AGIYHRFTLDTSNYVKVMQILSYGVQR 156 (160)
Q Consensus 130 ~g~~H~f~~~~~~~~~~ir~f~~~p~w 156 (160)
+|..|...+.++.....+.+- .|.|
T Consensus 232 ~gwwH~v~s~~~~~slsvsi~--~~~~ 256 (342)
T 1vrb_A 232 RGLWHSTKSDQATLALNITFG--QPAW 256 (342)
T ss_dssp TTCEEEEECSSCEEEEEEEEC--CCBH
T ss_pred CCccEEEEECCCCceEEEEEC--CCcH
Confidence 999999987642233333333 5555
No 143
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.76 E-value=0.066 Score=43.77 Aligned_cols=54 Identities=20% Similarity=0.309 Sum_probs=38.4
Q ss_pred cccceecCcc---------eEEEE-ee---eeEEEEEe---cCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC
Q 031374 85 FYTEHIHADE---------EIRYC-LE---GSGYFDVR---DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (160)
Q Consensus 85 ~~~~H~H~~~---------Ei~yv-l~---G~g~f~i~---~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~ 141 (160)
-++.|.|+.+ |++|+ +. |-|.-.+- +..|. .+.|+.||+++||+|- |...+-..
T Consensus 167 SyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy-Hp~~a~pG 236 (270)
T 2qjv_A 167 SWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY-HPVATIAG 236 (270)
T ss_dssp SCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB-CCEEECTT
T ss_pred cCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc-CCCcCCCC
Confidence 3689999864 99987 43 56666661 11122 6999999999999999 98554433
No 144
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=94.33 E-value=0.66 Score=40.80 Aligned_cols=64 Identities=19% Similarity=0.314 Sum_probs=47.8
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCCC--------------------cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEE
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDESD--------------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVK 145 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~~--------------------~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~ 145 (160)
+..|+=..+=+..-+.|+=.+.+....+ ..+.+.+++||++.||+|..|...+.+...-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 4567666777778889999999965321 24689999999999999999999887544444
Q ss_pred EEEE
Q 031374 146 VMQI 149 (160)
Q Consensus 146 ~ir~ 149 (160)
.+.+
T Consensus 258 hlTi 261 (489)
T 4diq_A 258 HLTL 261 (489)
T ss_dssp EEEE
T ss_pred EEee
Confidence 4444
No 145
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.32 E-value=0.15 Score=41.52 Aligned_cols=66 Identities=18% Similarity=0.215 Sum_probs=51.6
Q ss_pred cccceecCcce-EEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCC--CeeeeeeCCCCcEEEEEEecCCc
Q 031374 85 FYTEHIHADEE-IRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG--IYHRFTLDTSNYVKVMQILSYGV 154 (160)
Q Consensus 85 ~~~~H~H~~~E-i~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g--~~H~f~~~~~~~~~~ir~f~~~p 154 (160)
-+..|-|...| |.|+++|+....-.-.+ .-.+++||+-..-|| +.|+-.+.+...+..+.++..-|
T Consensus 51 gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn----~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvnLP 119 (277)
T 2p17_A 51 TFDVHPHRGIETVTYVISGELEHFDSKAG----HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVNLP 119 (277)
T ss_dssp CCCCEEECSEEEEEEEEESCEEEEETTTE----EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEECC
T ss_pred CCCCCCCCCcEEEEEEEEeEEEEeeCCCC----ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEeeCC
Confidence 47899998655 99999999887754222 678999999888775 78987766667899999987544
No 146
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=94.08 E-value=0.06 Score=44.61 Aligned_cols=22 Identities=41% Similarity=0.690 Sum_probs=20.0
Q ss_pred EEEEcCCcEEEeCCCCeeeeee
Q 031374 117 RIWIKAGDLIVLPAGIYHRFTL 138 (160)
Q Consensus 117 ~~~v~~GDli~iP~g~~H~f~~ 138 (160)
.+.++|||.++||||+.|....
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEECCTTCEEEECTTCCEEECS
T ss_pred EEEcCCCCEEEcCCCCceEecC
Confidence 7999999999999999998653
No 147
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=94.07 E-value=0.27 Score=42.51 Aligned_cols=55 Identities=22% Similarity=0.318 Sum_probs=43.6
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCC----------------CcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDES----------------DQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~----------------~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
+..|+-..+=+...+.|+=.+.+-... ...+.+.++|||++.||+|..|.....+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 367886677788888999999885432 1246799999999999999999988654
No 148
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=93.98 E-value=0.33 Score=40.41 Aligned_cols=66 Identities=9% Similarity=0.052 Sum_probs=48.0
Q ss_pred ccceecCcceEEEEeeeeEEEEEecCC-----------------------------------CcEEEEEEcCCcEEEeCC
Q 031374 86 YTEHIHADEEIRYCLEGSGYFDVRDES-----------------------------------DQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g~f~i~~~~-----------------------------------~~~~~~~v~~GDli~iP~ 130 (160)
...|....+=+...+.|+=.+.+-... ...+.+.++|||+|+||+
T Consensus 196 t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~ 275 (349)
T 3d8c_A 196 TPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPM 275 (349)
T ss_dssp EEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEEEECT
T ss_pred ccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEEEECC
Confidence 355665566777788998888763210 157899999999999999
Q ss_pred CCeeeeeeCC-CCcEEEEEEec
Q 031374 131 GIYHRFTLDT-SNYVKVMQILS 151 (160)
Q Consensus 131 g~~H~f~~~~-~~~~~~ir~f~ 151 (160)
|-.|.....+ .....++.++.
T Consensus 276 gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 276 YWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp TCEEEEEECTTSCCEEEEEEEE
T ss_pred CCcEEEEEcCCCCcEEEEEEEc
Confidence 9999998765 34455666643
No 149
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=92.92 E-value=0.077 Score=35.37 Aligned_cols=28 Identities=14% Similarity=0.210 Sum_probs=24.0
Q ss_pred CcccceecC-cceEEEEeeeeEEEEEecC
Q 031374 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDE 111 (160)
Q Consensus 84 ~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~ 111 (160)
..+..|+|. ..||.||++|++++.+-+.
T Consensus 47 g~~~PH~hprA~ei~~V~~G~~~v~~V~~ 75 (79)
T 1dgw_X 47 ALFVPHYNSRATVILVANEGRAEVELVGL 75 (79)
T ss_dssp CEEEEEEESSCEEEEEEEESCEEEEEEEE
T ss_pred cCcCCccCCCCcEEEEEEeceEEEEEecC
Confidence 457899998 6799999999999988654
No 150
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=92.73 E-value=0.25 Score=40.88 Aligned_cols=66 Identities=12% Similarity=0.142 Sum_probs=46.1
Q ss_pred cceecCcceEEEEeeeeEEEEEecCC------------------------------CcEEEEEEcCCcEEEeCCCCeeee
Q 031374 87 TEHIHADEEIRYCLEGSGYFDVRDES------------------------------DQWIRIWIKAGDLIVLPAGIYHRF 136 (160)
Q Consensus 87 ~~H~H~~~Ei~yvl~G~g~f~i~~~~------------------------------~~~~~~~v~~GDli~iP~g~~H~f 136 (160)
..|.-..+=+...+.|+=.+.+-... ...+.+.++|||+|+||+|-.|..
T Consensus 181 ~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v 260 (338)
T 3al5_A 181 WTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNV 260 (338)
T ss_dssp EEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTTCEEEE
T ss_pred cceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCCCeEEE
Confidence 34555555666678898888764210 127899999999999999999999
Q ss_pred eeCCCCcEEEEE-EecCCc
Q 031374 137 TLDTSNYVKVMQ-ILSYGV 154 (160)
Q Consensus 137 ~~~~~~~~~~ir-~f~~~p 154 (160)
.+.+ ...++. .|..-|
T Consensus 261 ~~l~--~sisvn~~~~~~~ 277 (338)
T 3al5_A 261 ISEE--FGVGVNIFWKHLP 277 (338)
T ss_dssp EESS--CEEEEEEEECSSC
T ss_pred eeCC--CEEEEEEEecCCc
Confidence 8764 345555 455543
No 151
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=92.32 E-value=0.39 Score=39.30 Aligned_cols=64 Identities=23% Similarity=0.208 Sum_probs=50.5
Q ss_pred ccceecCcce-EEEEe-eeeEEEEEecCCCcEEEEEEcCCcEEEeCCC--CeeeeeeCCCCcEEEEEEecCC
Q 031374 86 YTEHIHADEE-IRYCL-EGSGYFDVRDESDQWIRIWIKAGDLIVLPAG--IYHRFTLDTSNYVKVMQILSYG 153 (160)
Q Consensus 86 ~~~H~H~~~E-i~yvl-~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g--~~H~f~~~~~~~~~~ir~f~~~ 153 (160)
+..|-|...| |.|++ +|+....-.-.+ .-.+++||+-..-|| +.|+-.+.+...+..+.++..-
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H~DS~Gn----~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvnL 120 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAHEDFCGH----TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVNL 120 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEEEETTSC----EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEEEC
T ss_pred CCCCCCCCeEEEEEECcceEEEEeeCCCC----ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEecC
Confidence 6899998755 89999 999988765333 688999999877766 7898766566789999998743
No 152
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=92.09 E-value=0.49 Score=39.05 Aligned_cols=37 Identities=32% Similarity=0.437 Sum_probs=31.5
Q ss_pred CcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCe
Q 031374 92 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY 133 (160)
Q Consensus 92 ~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~ 133 (160)
....+..|++|+|.+..++. .+.+++||.++||++..
T Consensus 268 ~~~~il~v~~G~~~l~~~~~-----~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKYEDK-----TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCC
T ss_pred CccEEEEEEcCeEEEEECCE-----EEEEcCCcEEEEeCCCc
Confidence 45789999999999877544 78999999999999873
No 153
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=91.72 E-value=0.58 Score=32.34 Aligned_cols=46 Identities=11% Similarity=0.179 Sum_probs=37.5
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~ 141 (160)
..|+.=|++|++.+.+.+.+ .| ....+||-+.||+|..-.......
T Consensus 41 ~~E~M~vvsG~~~V~lpg~~-ew--~~~~aGesF~Vpans~F~l~v~~~ 86 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVGEA-DW--TTYSSGESFDVEGNSSFELQVKDA 86 (94)
T ss_dssp SCEEEEEEESEEEEEETTCS-SC--EEEETTCEEEECSSEEEEEEESSC
T ss_pred CeEEEEEEEeEEEEEcCCCC-cC--EEECCCCEEEECCCCEEEEEEccc
Confidence 57999999999999999653 34 667799999999998777666543
No 154
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=91.62 E-value=0.78 Score=32.99 Aligned_cols=58 Identities=21% Similarity=0.253 Sum_probs=41.3
Q ss_pred ceEEEEeeeeEEEEEecCCCc---EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 94 EEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 94 ~Ei~yvl~G~g~f~i~~~~~~---~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
-..+-|++|+..|..-..++. --.+.+.+|+.-+|||...|+..++++-.|. |.||..
T Consensus 39 WgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~-leFyc~ 99 (119)
T 3dl3_A 39 FGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFN-INFWSD 99 (119)
T ss_dssp EEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEE-EEEEEC
T ss_pred EEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEE-EEEEEC
Confidence 467889999999997332221 2357888999999999999999966554433 445443
No 155
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=91.38 E-value=0.53 Score=38.55 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=37.9
Q ss_pred Ccc-eEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCee-eeeeCCCCcEEEEEEec
Q 031374 92 ADE-EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYH-RFTLDTSNYVKVMQILS 151 (160)
Q Consensus 92 ~~~-Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H-~f~~~~~~~~~~ir~f~ 151 (160)
... .+..|++| |.+..++. .+.+++||.++|||+..- .+.. + .++++|.|.
T Consensus 246 ~~~~~il~v~~G-~~i~~~~~-----~~~l~~G~~~~ipa~~~~~~i~g--~-~~~~~~a~~ 298 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFILRGKE-----TADLHRGYSCLVPASTDSFTVES--E-RGKIVRIYL 298 (300)
T ss_dssp CSBCEEEEEEES-CEEEESSS-----EEEECTTCEEEECTTCCEEEEEE--E-EEEEEEEEE
T ss_pred CCceEEEEEccc-EEEEeCCe-----EEEEccceEEEEeCCCceEEEEe--C-ceEEEEEEE
Confidence 456 89999999 99887655 789999999999999843 2322 1 466666653
No 156
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=90.92 E-value=0.6 Score=39.75 Aligned_cols=54 Identities=15% Similarity=0.305 Sum_probs=38.8
Q ss_pred ecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEec
Q 031374 90 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILS 151 (160)
Q Consensus 90 ~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~ 151 (160)
.+....|..|++|++.+...+. .+.+++||.++||++..- ++... ..+++|.|.
T Consensus 339 ~~~~~~il~v~~G~~~l~~~~~-----~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~~ 392 (394)
T 2wfp_A 339 GQHSAAILFCVEGEAVLRKDEQ-----RLVLKPGESAFIGADESP-VNASG--TGRLARVYN 392 (394)
T ss_dssp CCSSCEEEEEEEEEEEEEETTE-----EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEEC
T ss_pred cCCCcEEEEEEeceEEEEECCe-----EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEEe
Confidence 3445689999999999877654 689999999999998532 22221 356666654
No 157
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=90.90 E-value=0.12 Score=42.40 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=33.2
Q ss_pred cceEEEEee-eeEEEEEecC-----------CCc------EEEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 93 DEEIRYCLE-GSGYFDVRDE-----------SDQ------WIRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 93 ~~Ei~yvl~-G~g~f~i~~~-----------~~~------~~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
-.|+.|+|+ .++.+.++.. ++. --.+.++|||.++||||+.|.+..+
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~G 181 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEGL 181 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEESE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCCC
Confidence 368888887 4455554421 122 4478999999999999999987543
No 158
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=90.38 E-value=3.2 Score=31.92 Aligned_cols=70 Identities=11% Similarity=-0.028 Sum_probs=50.1
Q ss_pred cCcccceecC-cceEEEEeeeeEEEEEecCC-C------cEEEEEEcCCcEEEe-CCCCeeeeeeCC-CCcEEEEEEecC
Q 031374 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-D------QWIRIWIKAGDLIVL-PAGIYHRFTLDT-SNYVKVMQILSY 152 (160)
Q Consensus 83 ~~~~~~H~H~-~~Ei~yvl~G~g~f~i~~~~-~------~~~~~~v~~GDli~i-P~g~~H~f~~~~-~~~~~~ir~f~~ 152 (160)
++..+.|-|. .-.+++|++|+..-..-+.. + ..=...+.+||+..+ |++-.|+..+.. ......|-+|..
T Consensus 80 Gq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~p 159 (200)
T 3eln_A 80 GHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSP 159 (200)
T ss_dssp TCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEES
T ss_pred CCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCC
Confidence 4567899998 57999999999887653211 1 122578999999999 888899998654 445555555543
No 159
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=89.28 E-value=0.71 Score=35.88 Aligned_cols=57 Identities=18% Similarity=0.313 Sum_probs=39.6
Q ss_pred hcCcccceecCcc---eEEEEee--eeEEEEEecCC------------------CcEEEEEEcCCcEEEeCCCCeeeeee
Q 031374 82 LKNFYTEHIHADE---EIRYCLE--GSGYFDVRDES------------------DQWIRIWIKAGDLIVLPAGIYHRFTL 138 (160)
Q Consensus 82 ~~~~~~~H~H~~~---Ei~yvl~--G~g~f~i~~~~------------------~~~~~~~v~~GDli~iP~g~~H~f~~ 138 (160)
.+.+...|.|..- =++|+-- +.|.+.+.+.. ..++.+..++||+|+.|+...|....
T Consensus 112 ~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 112 EGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp TTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECC
T ss_pred CCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccC
Confidence 3678899999743 3455532 33444444321 34557889999999999999999876
No 160
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=88.64 E-value=0.3 Score=41.58 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=20.7
Q ss_pred EEEEcCCcEEEeCCCCeeeeeeC
Q 031374 117 RIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 117 ~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
.+.++|||.++||||+.|.+..+
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCCC
Confidence 79999999999999999987654
No 161
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=88.51 E-value=0.78 Score=38.20 Aligned_cols=27 Identities=22% Similarity=0.377 Sum_probs=24.1
Q ss_pred EEEEEEcCCcEEEeCCCCeeeeeeCCC
Q 031374 115 WIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (160)
Q Consensus 115 ~~~~~v~~GDli~iP~g~~H~f~~~~~ 141 (160)
.+++.+++||+|+||+|-.|...+.+.
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 478999999999999999999887664
No 162
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=87.88 E-value=1.5 Score=37.90 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=39.5
Q ss_pred cCcceEEEEeeeeEEEEEecCCCcEEE-EEEcCCcEEEeCCCCeeeeeeCC---CCcEEEEEEec
Q 031374 91 HADEEIRYCLEGSGYFDVRDESDQWIR-IWIKAGDLIVLPAGIYHRFTLDT---SNYVKVMQILS 151 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~~~~~~~~~-~~v~~GDli~iP~g~~H~f~~~~---~~~~~~ir~f~ 151 (160)
.....|..|++|+|.+...+.. . . +.+++||.++||++..=.+.... ...+.+.|-|.
T Consensus 377 ~~~~~illv~~G~g~i~~~~~~-~--~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~ 438 (440)
T 1pmi_A 377 LNGPSIVIATNGKGTIQITGDD-S--TKQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFV 438 (440)
T ss_dssp CSSCEEEEEEESEEEEEETTCG-G--GCEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEEC
T ss_pred CCCcEEEEEEeCeEEEEeCCcc-c--ceEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEe
Confidence 3467899999999998875320 0 2 68999999999999433344431 34466666554
No 163
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=87.67 E-value=1.6 Score=29.94 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=27.8
Q ss_pred EEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecC
Q 031374 116 IRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSY 152 (160)
Q Consensus 116 ~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~ 152 (160)
++-.|++||+++||+|-+=...++. .+..+.|-+.
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tn 40 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVN 40 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEES
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEec
Confidence 4678999999999999888887775 3777777544
No 164
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=87.30 E-value=2 Score=30.43 Aligned_cols=51 Identities=14% Similarity=0.181 Sum_probs=39.9
Q ss_pred ceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC
Q 031374 88 EHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (160)
Q Consensus 88 ~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~ 141 (160)
.+..+ ..|+.=|++|++.+.+.+.+ .| ....+|+-..||++..-.......
T Consensus 51 YtF~T~~~E~MevvsG~l~V~Lpg~~-eW--~~~~aGesF~VpanssF~lkv~~~ 102 (111)
T 3hqx_A 51 LTFETHVPERMEIISGECRVKIADST-ES--ELFRAGQSFYVPGNSLFKIETDEV 102 (111)
T ss_dssp EEEECSSCEEEEEEESEEEEEETTCS-SC--EEEETTCEEEECTTCEEEEECSSC
T ss_pred eEEcCCCcEEEEEEEeEEEEEcCCcc-cC--EEeCCCCEEEECCCCcEEEEECcc
Confidence 34444 57999999999999999754 44 567799999999999877776543
No 165
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=87.11 E-value=1 Score=31.71 Aligned_cols=49 Identities=22% Similarity=0.321 Sum_probs=38.2
Q ss_pred ceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 88 EHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 88 ~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
.+..+ ..|+.-|++|++.+.+.+.+ .| ....+|+-+.||++..-.....
T Consensus 48 Y~F~T~~~E~MevvsG~l~V~LpG~~-eW--~~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 48 YTLSSEVAETIRVLSGMAYYHAEGAN-DV--QELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp EEECCSSCEEEEEEEEEEEEECTTCS-SC--EEEETTCEEEECSSSCEEEEEE
T ss_pred EEecCCCcEEEEEEEeEEEEECCCCc-cC--EEECCCCEEEECCCCcEEEEEC
Confidence 44454 57999999999999999753 44 5677999999999987666543
No 166
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=86.43 E-value=1.2 Score=36.51 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=38.9
Q ss_pred eecCcceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeee-------eeeCCCCcEEEEEEecCCccc
Q 031374 89 HIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR-------FTLDTSNYVKVMQILSYGVQR 156 (160)
Q Consensus 89 H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~-------f~~~~~~~~~~ir~f~~~p~w 156 (160)
-.|+..|=.||++|.+ .+|+..+-|+|+.|. --.+++..+.++|.=.+--+|
T Consensus 234 ~iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~Se~G~l~fvR~DgdLs~~ 292 (303)
T 2qdr_A 234 MIQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHITDDGGLFFVRVDRDLSKV 292 (303)
T ss_dssp EEECSCEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEEESSCEEEEEEESSCTTST
T ss_pred eeeccceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcCcCCceEEEEEeCccccee
Confidence 3588888889999976 249999999999999 444566677777765554444
No 167
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=86.42 E-value=8.6 Score=29.86 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=51.7
Q ss_pred cCcccceecCcceEEEEeeeeEEEEE--ecCCCcEE----EEEEcCCcEEEeCCC--CeeeeeeC-CCCcEEEEEEecCC
Q 031374 83 KNFYTEHIHADEEIRYCLEGSGYFDV--RDESDQWI----RIWIKAGDLIVLPAG--IYHRFTLD-TSNYVKVMQILSYG 153 (160)
Q Consensus 83 ~~~~~~H~H~~~Ei~yvl~G~g~f~i--~~~~~~~~----~~~v~~GDli~iP~g--~~H~f~~~-~~~~~~~ir~f~~~ 153 (160)
++..+.|-|..--++.|++|+..-.+ ...++... ...+.+||++.++++ -.|+..+. .......|-+|...
T Consensus 83 Gq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~p 162 (211)
T 3uss_A 83 GQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGAN 162 (211)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCC
Confidence 45678999998899999999886544 11122211 378999999999988 79999865 34567777777653
No 168
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=85.73 E-value=1.2 Score=38.57 Aligned_cols=47 Identities=19% Similarity=0.301 Sum_probs=36.3
Q ss_pred eEEEEeeeeEEEEEec-------------------------CCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC
Q 031374 95 EIRYCLEGSGYFDVRD-------------------------ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (160)
Q Consensus 95 Ei~yvl~G~g~f~i~~-------------------------~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~ 141 (160)
-.+.++.|+=.|.+-- ..++++++.+++||.|+||+|-.|...+.+.
T Consensus 255 ~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 255 VWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp EEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred eeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 3567888887777631 1235789999999999999999999876543
No 169
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.69 E-value=0.92 Score=38.80 Aligned_cols=37 Identities=30% Similarity=0.332 Sum_probs=28.2
Q ss_pred EEEEEcCCcEEEeCCCCeeeeeeCCCCcEE-EEEEecCC
Q 031374 116 IRIWIKAGDLIVLPAGIYHRFTLDTSNYVK-VMQILSYG 153 (160)
Q Consensus 116 ~~~~v~~GDli~iP~g~~H~f~~~~~~~~~-~ir~f~~~ 153 (160)
+.+.-++||.|+||||-+|...+-.+ .++ +.-|++.+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~-~i~va~df~spe 330 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHS-CIQVTEDFVSPE 330 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSE-EEEEEEEECCGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccc-hhhHhhhhcChh
Confidence 47888999999999999999987664 343 55555543
No 170
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=85.65 E-value=2 Score=35.26 Aligned_cols=51 Identities=18% Similarity=0.219 Sum_probs=28.0
Q ss_pred cccceecC-c-ceEEEEe-e-eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeee
Q 031374 85 FYTEHIHA-D-EEIRYCL-E-GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 135 (160)
Q Consensus 85 ~~~~H~H~-~-~Ei~yvl-~-G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~ 135 (160)
-++.|.|+ . ++.+|+- . ....|..-+..|+-.-+.|+-||.|++|+|-+|.
T Consensus 195 SyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 195 TMPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp C--------CEEEEEEESCCTTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC
T ss_pred CCCCccCCCCCeeEEEEEeCCCCeEEEECCCCCceEEEEEECCCEEEeCCCcccC
Confidence 36899998 3 3444442 1 1234444445555556889999999999999996
No 171
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=85.35 E-value=3.1 Score=34.07 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=36.4
Q ss_pred cccceecC--cceEEEEe---eeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 85 FYTEHIHA--DEEIRYCL---EGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 85 ~~~~H~H~--~~Ei~yvl---~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
-++.|.|+ .||++|+- .|.+ |+.-+..++-..+.|+-||.|++|.+-.|.-- +.+++
T Consensus 195 SyPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~p~Etrhi~V~n~daVlvP~wh~h~~~-G~~~Y 256 (282)
T 1xru_A 195 TMPCHTHERRMEVYFYFNMDDDACV-FHMMGQPQETRHIVMHNEQAVISPSWSIHSGV-GTKAY 256 (282)
T ss_dssp SCSEEECTTEEEEEEEESCCTTCCE-EEEEEETTEEEEEEECSSEEEEECTTCEEEEE-ESSCC
T ss_pred CCCCccCCCCceEEEEEEeCCCCEE-EEEeCCCCCeeEEEEECCCEEEeCCCCCCCCC-Cccce
Confidence 37899998 36676664 1333 33334445544578999999999975566633 44343
No 172
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=84.37 E-value=1.5 Score=36.78 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=29.7
Q ss_pred EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCcccC
Q 031374 115 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQRQ 157 (160)
Q Consensus 115 ~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~w~ 157 (160)
++++.=+|||+|+++||.+||.-+.+ +...+-.-...|-|.
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G--~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATG--WCNNIAWNVGPLTAY 318 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEEESCTTG
T ss_pred eEEEEECCCCEEEECCCceEEEEecc--eeeEEEEEeCCCcHH
Confidence 55788899999999999999976654 344454544555554
No 173
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=84.36 E-value=0.98 Score=38.34 Aligned_cols=54 Identities=20% Similarity=0.269 Sum_probs=38.9
Q ss_pred ccceecCcc--eEEEEeeeeEEEEEec-------------------------CCCcEEEEEEcCCcEEEeCCCCeeeeee
Q 031374 86 YTEHIHADE--EIRYCLEGSGYFDVRD-------------------------ESDQWIRIWIKAGDLIVLPAGIYHRFTL 138 (160)
Q Consensus 86 ~~~H~H~~~--Ei~yvl~G~g~f~i~~-------------------------~~~~~~~~~v~~GDli~iP~g~~H~f~~ 138 (160)
...|..... -.+.++.|+=.|.+-- ..++++++.+++||.|+||+|-.|...+
T Consensus 160 T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWwH~V~n 239 (371)
T 3k3o_A 160 TDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLT 239 (371)
T ss_dssp EEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred CCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCeEEEec
Confidence 444555433 2457888887777631 1245789999999999999999999765
Q ss_pred C
Q 031374 139 D 139 (160)
Q Consensus 139 ~ 139 (160)
-
T Consensus 240 l 240 (371)
T 3k3o_A 240 P 240 (371)
T ss_dssp E
T ss_pred C
Confidence 4
No 174
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=84.32 E-value=1.5 Score=38.13 Aligned_cols=57 Identities=21% Similarity=0.221 Sum_probs=40.0
Q ss_pred cccceecCc--ceEEEEeeeeEEEEEecC-------------------------CCcEEEEEEcCCcEEEeCCCCeeeee
Q 031374 85 FYTEHIHAD--EEIRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRFT 137 (160)
Q Consensus 85 ~~~~H~H~~--~Ei~yvl~G~g~f~i~~~-------------------------~~~~~~~~v~~GDli~iP~g~~H~f~ 137 (160)
+...|.... .-...++.|+=.|.+--. .++.+++.+++||+|+||+|=.|...
T Consensus 208 ~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWwH~V~ 287 (451)
T 2yu1_A 208 YTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVY 287 (451)
T ss_dssp EEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCEEEEE
T ss_pred CCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCceEEEe
Confidence 344555543 245677888777765211 13578999999999999999999987
Q ss_pred eCCC
Q 031374 138 LDTS 141 (160)
Q Consensus 138 ~~~~ 141 (160)
+.+.
T Consensus 288 nled 291 (451)
T 2yu1_A 288 TPTD 291 (451)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 6553
No 175
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=84.10 E-value=0.62 Score=40.29 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=20.4
Q ss_pred EEEEcCCcEEEeCCCCeeeeeeC
Q 031374 117 RIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 117 ~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
.+.++|||.++||||++|.+-.+
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred eEecCCCCEEecCCCCccccCCC
Confidence 68899999999999999987543
No 176
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=83.82 E-value=1.1 Score=38.39 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=38.9
Q ss_pred ccceecCc--ceEEEEeeeeEEEEEec-------------------------CCCcEEEEEEcCCcEEEeCCCCeeeeee
Q 031374 86 YTEHIHAD--EEIRYCLEGSGYFDVRD-------------------------ESDQWIRIWIKAGDLIVLPAGIYHRFTL 138 (160)
Q Consensus 86 ~~~H~H~~--~Ei~yvl~G~g~f~i~~-------------------------~~~~~~~~~v~~GDli~iP~g~~H~f~~ 138 (160)
...|.-.. .-.+.++.|+=.|.+-- ..++++++.+++||.|+||+|-.|...+
T Consensus 187 T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWwH~V~n 266 (392)
T 3pua_A 187 TDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWIYATLT 266 (392)
T ss_dssp EEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred CCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCceEEEec
Confidence 34455433 34667888887777621 1135789999999999999999999765
Q ss_pred C
Q 031374 139 D 139 (160)
Q Consensus 139 ~ 139 (160)
.
T Consensus 267 l 267 (392)
T 3pua_A 267 P 267 (392)
T ss_dssp E
T ss_pred C
Confidence 4
No 177
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=83.09 E-value=3.8 Score=27.79 Aligned_cols=58 Identities=12% Similarity=0.001 Sum_probs=38.9
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEEe
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~f 150 (160)
.+.+++|++|.......+.+++ .+.-.+.+||++=.. .+.++.++......+.++++-
T Consensus 46 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (149)
T 2pqq_A 46 GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALG 107 (149)
T ss_dssp ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEE
T ss_pred CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEe
Confidence 4579999999999887655544 556788999987322 344555555445556666653
No 178
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=81.14 E-value=1.3 Score=39.27 Aligned_cols=56 Identities=21% Similarity=0.326 Sum_probs=39.5
Q ss_pred CcccceecCc--ceEEEEeeeeEEEEEecC-------------------------CCcEEEEEEcCCcEEEeCCCCeeee
Q 031374 84 NFYTEHIHAD--EEIRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRF 136 (160)
Q Consensus 84 ~~~~~H~H~~--~Ei~yvl~G~g~f~i~~~-------------------------~~~~~~~~v~~GDli~iP~g~~H~f 136 (160)
.+...|.-.. .-.+.++.|.=.|.+--. .+.++++.++|||.|+||+|-.|..
T Consensus 307 S~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~HaV 386 (528)
T 3pur_A 307 SYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIHAV 386 (528)
T ss_dssp EEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCEEEE
T ss_pred CCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCceEEE
Confidence 4445555543 346777888777765321 2357899999999999999999986
Q ss_pred eeC
Q 031374 137 TLD 139 (160)
Q Consensus 137 ~~~ 139 (160)
.+-
T Consensus 387 ~tl 389 (528)
T 3pur_A 387 LTP 389 (528)
T ss_dssp EEE
T ss_pred ecC
Confidence 653
No 179
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=80.98 E-value=1.3 Score=38.75 Aligned_cols=55 Identities=20% Similarity=0.256 Sum_probs=40.2
Q ss_pred cccceecCcc--eEEEEeeeeEEEEEecC-------------------------CCcEEEEEEcCCcEEEeCCCCeeeee
Q 031374 85 FYTEHIHADE--EIRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRFT 137 (160)
Q Consensus 85 ~~~~H~H~~~--Ei~yvl~G~g~f~i~~~-------------------------~~~~~~~~v~~GDli~iP~g~~H~f~ 137 (160)
+...|..... -.+.++.|+=.|.+--. .++++++.+++||+|+||+|-.|...
T Consensus 278 ~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~ 357 (488)
T 3kv5_D 278 YTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVL 357 (488)
T ss_dssp EEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEE
T ss_pred CCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEee
Confidence 3455665433 35678889887777422 23578999999999999999999976
Q ss_pred eC
Q 031374 138 LD 139 (160)
Q Consensus 138 ~~ 139 (160)
+-
T Consensus 358 nl 359 (488)
T 3kv5_D 358 TS 359 (488)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 180
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=79.30 E-value=1.9 Score=36.86 Aligned_cols=56 Identities=20% Similarity=0.257 Sum_probs=40.3
Q ss_pred CcccceecCcc--eEEEEeeeeEEEEEecC-------------------------CCcEEEEEEcCCcEEEeCCCCeeee
Q 031374 84 NFYTEHIHADE--EIRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRF 136 (160)
Q Consensus 84 ~~~~~H~H~~~--Ei~yvl~G~g~f~i~~~-------------------------~~~~~~~~v~~GDli~iP~g~~H~f 136 (160)
.+...|..... -...++.|+=.|.+--. .++++++.+++||.++||+|-.|..
T Consensus 186 S~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~H~V 265 (397)
T 3kv9_A 186 SYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAV 265 (397)
T ss_dssp CEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEE
T ss_pred CCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCeEEc
Confidence 44455666533 35678888777766321 2357899999999999999999997
Q ss_pred eeC
Q 031374 137 TLD 139 (160)
Q Consensus 137 ~~~ 139 (160)
.+-
T Consensus 266 ~nl 268 (397)
T 3kv9_A 266 LTS 268 (397)
T ss_dssp EEE
T ss_pred cCC
Confidence 654
No 181
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=77.88 E-value=4.1 Score=27.44 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=35.0
Q ss_pred cceEEEEeeeeEEEEEecCCC-cEE---EEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD-QWI---RIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~-~~~---~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.++ ..+ .-.+.+||++=.. .+.++.++......+.++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 47 ADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp CCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred CCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEEE
Confidence 468999999999987765554 344 5578999987433 45555555554555666655
No 182
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=77.50 E-value=8.8 Score=28.16 Aligned_cols=53 Identities=11% Similarity=0.127 Sum_probs=35.0
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.........+...+--.+.+||++-. ++.++......+.++++
T Consensus 45 ~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~----~~~~~~~A~~~~~v~~i 97 (220)
T 2fmy_A 45 RNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT----HTRAFIQAMEDTTILYT 97 (220)
T ss_dssp SCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES----CSSSEEEESSSEEEEEE
T ss_pred CCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC----ccceEEEEcCcEEEEEE
Confidence 467999999999886443333466678899999865 34444433445666655
No 183
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=76.65 E-value=9.7 Score=27.72 Aligned_cols=57 Identities=11% Similarity=0.046 Sum_probs=38.7
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEe-----CCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL-----PAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~i-----P~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+|+ .+-..+.+||++.+ -.+.++.++......+.++++
T Consensus 44 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~i 106 (220)
T 3dv8_A 44 CTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWII 106 (220)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEEE
T ss_pred cceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEEE
Confidence 4679999999999887666554 55567899999632 234455555544455666655
No 184
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=76.63 E-value=21 Score=26.91 Aligned_cols=54 Identities=9% Similarity=0.058 Sum_probs=40.9
Q ss_pred cccceecCcceEEEEeeeeE-EEEEecCCCcEEEEEEc----CCc---EEEeCCCCeeeeee
Q 031374 85 FYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIWIK----AGD---LIVLPAGIYHRFTL 138 (160)
Q Consensus 85 ~~~~H~H~~~Ei~yvl~G~g-~f~i~~~~~~~~~~~v~----~GD---li~iP~g~~H~f~~ 138 (160)
+..+|.-..+|+.+...|.. .+.+-..+++..++.+. +|+ -++||+|+......
T Consensus 65 ~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 65 PDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp CEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred CccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 34445446899999999976 67776677777777775 577 68999999888777
No 185
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=75.53 E-value=5.8 Score=28.51 Aligned_cols=57 Identities=9% Similarity=0.028 Sum_probs=38.8
Q ss_pred cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEE-eC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIV-LP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~-iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.......+.+| +.+.-.+.+||++- +. .+.++.++......+.++++
T Consensus 48 ~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i 109 (194)
T 3dn7_A 48 CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSI 109 (194)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEE
Confidence 468999999999988765555 45666789999985 32 34455555544555666655
No 186
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=75.18 E-value=9.3 Score=28.03 Aligned_cols=57 Identities=14% Similarity=0.228 Sum_probs=36.9
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC----CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP----AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP----~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+|+ .+--.+.+||++-.. .+.++.++......+.++++
T Consensus 52 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 113 (230)
T 3iwz_A 52 AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEI 113 (230)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEcCcEEEEEE
Confidence 4689999999999887655554 566678999998422 22334444434445555554
No 187
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=75.17 E-value=9.2 Score=28.16 Aligned_cols=53 Identities=9% Similarity=0.186 Sum_probs=34.4
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.........+...+--.+.+||++- .++.+++.....+.++++
T Consensus 41 ~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG----~~~~~~~~A~~~~~v~~i 93 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC----MHSGCLVEATERTEVRFA 93 (222)
T ss_dssp CCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE----SCSSCEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec----CCCCEEEEEccceEEEEE
Confidence 45799999999988644323345566889999987 334444433445666655
No 188
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=75.14 E-value=10 Score=26.36 Aligned_cols=56 Identities=7% Similarity=-0.132 Sum_probs=37.0
Q ss_pred cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEE---eCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIV---LPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~---iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|....... .++ ..+.-.+.+||++= +-.+..+.++......+.++++
T Consensus 79 ~~~~y~i~~G~v~~~~~-~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i 138 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYVK-CDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGL 138 (161)
T ss_dssp CCEEEEEEESEEEEEEE-ETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEE
T ss_pred CcEEEEEEeCEEEEEEc-CCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEE
Confidence 46899999999998884 444 35556789999763 2234555555544555666655
No 189
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=74.77 E-value=8.3 Score=27.84 Aligned_cols=57 Identities=14% Similarity=-0.000 Sum_probs=37.9
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEe--CCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL--PAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~i--P~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+++ .+--.+.+||++=- -.+.++.++......+.++++
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i 76 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGL 76 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEE
Confidence 4579999999998887655544 55668899998833 123445555544555666655
No 190
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=74.46 E-value=9.9 Score=27.45 Aligned_cols=57 Identities=23% Similarity=0.305 Sum_probs=37.3
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeCC----CCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA----GIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP~----g~~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.......+.+|+ .+--.+.+||++-..+ +.++.++......+.++++
T Consensus 37 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 98 (210)
T 3ryp_A 37 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 98 (210)
T ss_dssp CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEE
Confidence 4679999999999887766554 5566789999984222 2134444444445666655
No 191
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=73.94 E-value=5.5 Score=35.33 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=28.0
Q ss_pred EEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCccc
Q 031374 115 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQR 156 (160)
Q Consensus 115 ~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~w 156 (160)
++++.=++||+|+++||.+||.-+.+ +...+-.-...|-|
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G--~~~n~awN~a~~~~ 376 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIG--WCNNIAWNVGPLTA 376 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEECCSSH
T ss_pred eEEEEECCCCEEEECCCceEEEEecc--eeeeeEEEeccCch
Confidence 45788889999999999999977655 23334444444444
No 192
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=72.32 E-value=25 Score=28.33 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=46.3
Q ss_pred hcCCceeeeeeeCCCcccCHHHHhcCcccceecCcceEEEEeeeeEEEEEecCCCcEEEEEE--cC--------CcEEEe
Q 031374 59 ARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWI--KA--------GDLIVL 128 (160)
Q Consensus 59 ~~gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v--~~--------GDli~i 128 (160)
.-.|.+.+++.|.++. .+...+-..|=.+..+.|++.+.++++ ++.+ .. .|.+.|
T Consensus 25 ~~~y~~f~~~~L~~Ge----------~~~~~~~~~E~~iv~l~G~~~V~~~g~-----~~~~~g~R~svF~~~~p~~lYv 89 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGE----------SITLPSDERERCLVLVAGLASVXAADS-----FFYRIGQRMSPFERIPAYSVYL 89 (270)
T ss_dssp TSSSCEEEEEEECTTC----------EEEECCSSEEEEEEEEESCEEEEETTE-----EEEEECCCSSGGGCSCCCEEEE
T ss_pred CcEEeEEEEEEecCCC----------EEEecCCCcEEEEEEecceEEEEECCE-----EEeccccccccccCCCCcEEEE
Confidence 3467778888888753 122233334556677899999999876 5644 33 599999
Q ss_pred CCCCeeeeeeCCC
Q 031374 129 PAGIYHRFTLDTS 141 (160)
Q Consensus 129 P~g~~H~f~~~~~ 141 (160)
|.|..=.+++.+.
T Consensus 90 p~g~~v~i~a~~~ 102 (270)
T 2qjv_A 90 PHHTEAXVTAETD 102 (270)
T ss_dssp CSSCCEEEEESSS
T ss_pred CCCCEEEEEecCC
Confidence 9999666776553
No 193
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=71.68 E-value=5.2 Score=30.93 Aligned_cols=56 Identities=14% Similarity=0.105 Sum_probs=37.7
Q ss_pred cCcceEEEEeeeeEEEEEe-cCCCcEEEEEEcCCcEEEeCCCCee---eeeeCCCCcEEEEEEec
Q 031374 91 HADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYH---RFTLDTSNYVKVMQILS 151 (160)
Q Consensus 91 H~~~Ei~yvl~G~g~f~i~-~~~~~~~~~~v~~GDli~iP~g~~H---~f~~~~~~~~~~ir~f~ 151 (160)
...--+.|+++|+..+.++ ++ .+.+.+||.+++-....- .........+..|+++.
T Consensus 138 ~~~~~~v~~l~G~~~v~~~~~~-----~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~l~~ 197 (200)
T 1yll_A 138 TASTLLLFAQQDGVAISLQGQP-----RGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVELDS 197 (200)
T ss_dssp CCSEEEEEESSSCEEEEETTEE-----EEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEccCcEEEEcCCCc-----eeecCCCCEEEEeCCCccceeEeccCCceEEEEEEEec
Confidence 3456789999999988776 34 799999999998655322 23333334455566543
No 194
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=71.27 E-value=3.8 Score=36.19 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=22.1
Q ss_pred EEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 115 WIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 115 ~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
++++.=+|||+|+++||++||..+.+
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs~G 337 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQATG 337 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS
T ss_pred eEEEEECCCCEEEECCCceEEEEecC
Confidence 45788889999999999999977654
No 195
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=70.80 E-value=13 Score=28.38 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=37.6
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeCC---CC-eeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA---GI-YHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP~---g~-~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.......+.+++ .+.-.+.+||++=..+ +. ++.++......+.++++
T Consensus 87 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i 148 (260)
T 3kcc_A 87 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 148 (260)
T ss_dssp CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEE
Confidence 4679999999999887765554 5667789999984322 12 34444444445666655
No 196
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=70.05 E-value=6 Score=31.03 Aligned_cols=44 Identities=7% Similarity=0.226 Sum_probs=31.8
Q ss_pred cEEEEEEcCCcEEEeCCCCeeeeeeC--CC-CcEEEEEEecCC-cccC
Q 031374 114 QWIRIWIKAGDLIVLPAGIYHRFTLD--TS-NYVKVMQILSYG-VQRQ 157 (160)
Q Consensus 114 ~~~~~~v~~GDli~iP~g~~H~f~~~--~~-~~~~~ir~f~~~-p~w~ 157 (160)
.++.+.+++||+++.-+.+.|+.... +. .....+++.... ..|.
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~~~~~~ 273 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWS 273 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEECTTCEEC
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcCCCCccC
Confidence 57899999999999999999997532 22 345566776653 3443
No 197
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=69.60 E-value=8.9 Score=28.17 Aligned_cols=57 Identities=18% Similarity=0.102 Sum_probs=36.6
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEe----CCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL----PAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~i----P~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+|+ .+--.+.+||++-. -.+..+.+++.....+.++++
T Consensus 40 ~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i 101 (213)
T 1o5l_A 40 IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSI 101 (213)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEE
Confidence 3578999999998877655554 55667899998732 122244455444455666655
No 198
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=69.50 E-value=11 Score=27.67 Aligned_cols=57 Identities=9% Similarity=0.038 Sum_probs=37.2
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+++ .+--.+.+||++=.. .+.++.++......+.++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i 107 (227)
T 3d0s_A 47 GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSM 107 (227)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEE
Confidence 4579999999999887765554 556688999987311 23444444444445666655
No 199
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=68.70 E-value=3.7 Score=33.62 Aligned_cols=39 Identities=18% Similarity=0.274 Sum_probs=28.6
Q ss_pred cceecC-cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeee
Q 031374 87 TEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 135 (160)
Q Consensus 87 ~~H~H~-~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~ 135 (160)
+.=.|. +-| +|||+|+.. ++ .-.+.+|..+++|+|+.=-
T Consensus 105 P~Gi~~ad~E-~fVL~G~i~--~G-------~~~l~~h~Y~f~PaGV~~~ 144 (303)
T 2qdr_A 105 PSGIFTADLE-IFVIKGAIQ--LG-------EWQLNKHSYSFIPAGVRIG 144 (303)
T ss_dssp CCBEESSCEE-EEEEESEEE--ET-------TEEECTTEEEEECTTCCBC
T ss_pred CCcccccceE-EEEEEeEEE--eC-------CEEecCCceEEecCCCccC
Confidence 344454 556 999988865 43 2578899999999998653
No 200
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=67.65 E-value=19 Score=25.83 Aligned_cols=57 Identities=16% Similarity=0.165 Sum_probs=36.3
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeCC---CC----eeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA---GI----YHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP~---g~----~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+|+ .+--.+.+||++=..+ +. ++.++......+.++++
T Consensus 31 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~~v~~i 95 (207)
T 2oz6_A 31 CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEI 95 (207)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcEEEEEE
Confidence 4579999999999887665544 5666789999983321 22 34444444445555554
No 201
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=65.99 E-value=24 Score=26.43 Aligned_cols=56 Identities=11% Similarity=0.023 Sum_probs=35.8
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEe-CCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL-PAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~i-P~g~~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.......+.+|+ .+--.+.+||++-. =.+. +..+......+.++++
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~-~~~~~~A~~~~~v~~i 107 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTG-NNIYATAMEPTRTCWF 107 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCS-CCEEEEESSSEEEEEE
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCC-CceEEEEcccEEEEEE
Confidence 3578999999999887655554 55667899999842 1122 3344434445555554
No 202
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=65.98 E-value=32 Score=25.53 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=34.2
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeCC---CC----eeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA---GI----YHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP~---g~----~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+|+ .+.-.+ +||++-..+ +. .+..++.. ..+.++++
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~~i 98 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAYVI 98 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEEEE
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEEEE
Confidence 4578999999999887666655 333334 899985432 22 34444443 34666655
No 203
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=65.91 E-value=6.1 Score=31.37 Aligned_cols=41 Identities=10% Similarity=0.104 Sum_probs=29.6
Q ss_pred CcEEEEEEcCCcEEEeCCCCeeeeeeCC--CCc-EEEEEEecCC
Q 031374 113 DQWIRIWIKAGDLIVLPAGIYHRFTLDT--SNY-VKVMQILSYG 153 (160)
Q Consensus 113 ~~~~~~~v~~GDli~iP~g~~H~f~~~~--~~~-~~~ir~f~~~ 153 (160)
..++.+.+++||+++.-+.+.|+..... ..+ ...+++....
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~~ 256 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASAD 256 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEETT
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECCC
Confidence 4678999999999999999999976432 223 3355555544
No 204
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=65.15 E-value=6.2 Score=30.84 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=29.9
Q ss_pred CcEEEEEEcCCcEEEeCCCCeeeeeeCCCC------cEEEEEEecC
Q 031374 113 DQWIRIWIKAGDLIVLPAGIYHRFTLDTSN------YVKVMQILSY 152 (160)
Q Consensus 113 ~~~~~~~v~~GDli~iP~g~~H~f~~~~~~------~~~~ir~f~~ 152 (160)
..++.+.+++||+++.-+.+.|+......+ ....+|+...
T Consensus 208 ~~~v~~~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 208 EHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp SCEECCCCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred CceeecccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecC
Confidence 357889999999999999999998754332 2445566655
No 205
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=64.53 E-value=13 Score=26.83 Aligned_cols=57 Identities=7% Similarity=-0.028 Sum_probs=38.0
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+|+ .+.-.+.+||++=.. .+.++.++......+.++++
T Consensus 40 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 100 (216)
T 4ev0_A 40 GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLAL 100 (216)
T ss_dssp CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEE
T ss_pred CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEE
Confidence 4689999999999888755554 566778999997321 23444444444445666655
No 206
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=64.37 E-value=14 Score=27.53 Aligned_cols=87 Identities=11% Similarity=0.019 Sum_probs=49.2
Q ss_pred ChHHHHHHHHhcCCceeeeeeeCCCcccCHHHHhcCcccceec-CcceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEE
Q 031374 49 NDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIH-ADEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLI 126 (160)
Q Consensus 49 ~~~~l~~l~~~~gy~~~dvi~v~~~~~p~~~~~~~~~~~~H~H-~~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli 126 (160)
+++.++.|....+ ....++.++.+ . .+.. ..+.+++|++|.......+.+| ..+--.+.+||++
T Consensus 30 ~~~~~~~l~~~~~---~~~~~~~~ge~----------i-~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 30 CHEDFTSILDKVK---LHFIKHKAGET----------I-IKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLI 95 (232)
T ss_dssp CHHHHHHHHHTSC---CEEEEECTTCE----------E-ECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEE
T ss_pred CHHHHHHHHhhCC---cEEEEECCCCE----------E-ECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCee
Confidence 3667888875411 23445554421 1 1111 2467999999999887654443 4566678999987
Q ss_pred EeC---CCCe-eeeeeCCCCcEEEEEE
Q 031374 127 VLP---AGIY-HRFTLDTSNYVKVMQI 149 (160)
Q Consensus 127 ~iP---~g~~-H~f~~~~~~~~~~ir~ 149 (160)
=.. .+.. +.++......+.++++
T Consensus 96 G~~~~~~~~~~~~~~~~A~~~~~v~~i 122 (232)
T 1zyb_A 96 EPQSLFGMNTNYASSYVAHTEVHTVCI 122 (232)
T ss_dssp CGGGGSSSCCBCSSEEEESSCEEEEEE
T ss_pred eehHHhCCCCCCceEEEEccceEEEEE
Confidence 322 2333 4444444445666555
No 207
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=63.98 E-value=1 Score=31.26 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=24.4
Q ss_pred EEEeee--eEEEEEecCCCcEEEEEEcCCcEEEeCC
Q 031374 97 RYCLEG--SGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 97 ~yvl~G--~g~f~i~~~~~~~~~~~v~~GDli~iP~ 130 (160)
-|++.| +|...+++.. .-.+++||.|+|=+
T Consensus 32 TYvI~GerSG~I~lNGAA----Arl~~~GD~vII~a 63 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAA----ARKVAIGDVVIILA 63 (97)
T ss_dssp EECEEECSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEeeccCCeEEEchHH----HccCCCCCEEEEEE
Confidence 578888 6889999875 67889999998744
No 208
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=63.66 E-value=9.1 Score=27.74 Aligned_cols=57 Identities=12% Similarity=-0.034 Sum_probs=36.8
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.......+.+++ .+.-.+.+||++=-. .+.++.+++.....+.++++
T Consensus 80 ~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fGe~~~l~~~~~~~~v~A~~~~~v~~i 140 (187)
T 3gyd_A 80 GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVASLPTDFAVL 140 (187)
T ss_dssp CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHHHHHCCCCSSEEEEEEEEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeeeeHHHhCCCCeeEEEEECCCeEEEEE
Confidence 4689999999999888766654 455678999987321 23444444433444555544
No 209
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=63.21 E-value=14 Score=27.30 Aligned_cols=57 Identities=11% Similarity=0.041 Sum_probs=37.2
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+|+ .+--.+.+||++=.. .+.++.++......+.++++
T Consensus 52 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 112 (237)
T 3fx3_A 52 AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHI 112 (237)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEECCceEEEEE
Confidence 4589999999999888665554 556678999987321 13344444444445555554
No 210
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=63.04 E-value=19 Score=26.39 Aligned_cols=57 Identities=11% Similarity=-0.010 Sum_probs=36.8
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.......+.+++ .+.-.+.+||++=.. .+.++.++......+.++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 107 (231)
T 3e97_A 47 GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLML 107 (231)
T ss_dssp TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcEEEEEE
Confidence 4679999999999887765554 566788999997422 23444455444445666555
No 211
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=61.41 E-value=17 Score=26.16 Aligned_cols=56 Identities=14% Similarity=0.184 Sum_probs=36.7
Q ss_pred ceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEEEeC--CCCeeeeeeCCCCcEEEEEE
Q 031374 94 EEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP--AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 94 ~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli~iP--~g~~H~f~~~~~~~~~~ir~ 149 (160)
+.+++|++|.......+.+|+ .+--.+.+||++-.+ .+.++.++......+.++++
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 568999999998877655554 556678999987431 13344444444445666665
No 212
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=60.20 E-value=6.4 Score=31.27 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=23.8
Q ss_pred CcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 113 DQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 113 ~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
..++.+.+++||+++.-+.+.|+.....
T Consensus 217 ~~~v~~~~~aGd~v~f~~~l~H~s~~N~ 244 (313)
T 2fct_A 217 ASAVPMQMKAGQFIIFWSTLMHASYPHS 244 (313)
T ss_dssp GGCEEECBCTTEEEEEETTSEEEECCBC
T ss_pred CceeEeeeCCceEEEEeCCceeeCCCCC
Confidence 3578999999999999999999976443
No 213
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=60.02 E-value=55 Score=25.26 Aligned_cols=53 Identities=19% Similarity=0.231 Sum_probs=38.6
Q ss_pred cceecCcceEEEEeeeeEEEEEecCCCcEEEEEEcC----Cc--EEEeCCCCeeeeeeC
Q 031374 87 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKA----GD--LIVLPAGIYHRFTLD 139 (160)
Q Consensus 87 ~~H~H~~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~----GD--li~iP~g~~H~f~~~ 139 (160)
.+|.-..+||.+...|.+.+.+-..++..-++.+.+ |+ -++||+|+.......
T Consensus 94 ~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 94 KFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp EEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred cceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 344446899999999977665655566666677764 44 389999999987654
No 214
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=59.32 E-value=11 Score=27.20 Aligned_cols=54 Identities=9% Similarity=0.136 Sum_probs=34.7
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEE---eCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV---LPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~---iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|...... .+++ +...+.+||++= +=.|.++.+++.....+.++++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i 168 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSL 168 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEE
T ss_pred CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEE
Confidence 4679999999998876 3444 566889999872 1123444455444455666655
No 215
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=58.96 E-value=9.9 Score=25.81 Aligned_cols=57 Identities=7% Similarity=-0.060 Sum_probs=34.2
Q ss_pred cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeC---CCCe-eeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP---AGIY-HRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP---~g~~-H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.++ ..+...+.+||++=.. .+.. +.++......+.++++
T Consensus 53 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (154)
T 2z69_A 53 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRF 114 (154)
T ss_dssp CCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccceEEEEE
Confidence 467999999999887654443 3445678999987321 2333 4444444445666655
No 216
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=58.38 E-value=17 Score=24.31 Aligned_cols=53 Identities=9% Similarity=0.012 Sum_probs=33.6
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeC---CCCeeeeee-CCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTL-DTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP---~g~~H~f~~-~~~~~~~~ir~ 149 (160)
.+.+++|++|...... .+++. ..+.+||++=.- .+.++.++. .....+.++++
T Consensus 58 ~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 58 LDSWYVILNGTVEISH--PDGKV--ENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp ECEEEECCBSCEEEEC--SSSCE--EEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred CCeEEEEEeCEEEEEc--CCCcE--EEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 3568999999998774 33443 558999987322 234444454 55556666665
No 217
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=56.39 E-value=21 Score=28.04 Aligned_cols=57 Identities=12% Similarity=-0.065 Sum_probs=38.8
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEE---eCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV---LPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~---iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+++.+...+.+||++= +=.+.++..+......+.++++
T Consensus 54 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~~i 113 (333)
T 4ava_A 54 AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTG 113 (333)
T ss_dssp CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEEEE
Confidence 46799999999998887666665677889999872 1123445555544455666655
No 218
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=55.92 E-value=24 Score=26.37 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=27.2
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEEEEcCCcEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLI 126 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~~v~~GDli 126 (160)
...+++|++|.......+.+|+ .+.-.+.+||++
T Consensus 61 ~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 61 AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 4689999999999887666554 566778999987
No 219
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=55.23 E-value=9.3 Score=27.86 Aligned_cols=53 Identities=6% Similarity=0.141 Sum_probs=33.4
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~i---P~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|....... +++ ...+.+||++=- =.|.++.+++.....+.++++
T Consensus 113 ~~~ly~I~~G~v~v~~~--~g~--~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i 168 (202)
T 3bpz_A 113 GKKMYFIQHGVVSVLTK--GNK--EMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSL 168 (202)
T ss_dssp CCEEEEEEECEEEEECT--TSC--CEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEeccEEEEEEC--CCe--EEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEE
Confidence 46799999999987643 333 346899998721 123445555544556666655
No 220
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=55.04 E-value=14 Score=25.40 Aligned_cols=53 Identities=19% Similarity=0.195 Sum_probs=33.7
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCC---CCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA---GIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~---g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|......++ +. ...+.+||++=--+ +.++.++......+.++++
T Consensus 79 ~~~~y~i~~G~v~~~~~~---~~-~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i 134 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYVNN---EW-ATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGI 134 (154)
T ss_dssp CCEEEEEEESCEEEEETT---EE-EEEECTTCEECCHHHHHCCCCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEECC---EE-EEEecCCCEeeehHhhcCCCcceEEEECcceEEEEE
Confidence 568999999999988743 33 44689999873211 4444444444445666555
No 221
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=54.04 E-value=25 Score=29.48 Aligned_cols=42 Identities=19% Similarity=0.042 Sum_probs=29.9
Q ss_pred cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCcccC
Q 031374 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQRQ 157 (160)
Q Consensus 114 ~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~w~ 157 (160)
.+.++.-++||+|++-||.+|+.-+.+-+--.++ --..|.|.
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAv--NFA~~~Wl 301 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAI--NFATPRWI 301 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE--EECCGGGH
T ss_pred ceEEEEeCCCcEEEECCCceEEEeeccccHhHhh--ccCcHHHH
Confidence 4668889999999999999999766554333344 33445564
No 222
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=51.35 E-value=15 Score=26.98 Aligned_cols=57 Identities=19% Similarity=0.095 Sum_probs=33.7
Q ss_pred cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+| ..+--.+.+||++=.. .+.++.++......+.++++
T Consensus 51 ~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i 111 (232)
T 2gau_A 51 PNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAI 111 (232)
T ss_dssp CCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEEEEE
Confidence 457999999999887654433 4556788999987321 13344444444445555555
No 223
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=51.06 E-value=3.6 Score=29.28 Aligned_cols=30 Identities=13% Similarity=0.261 Sum_probs=23.1
Q ss_pred EEEee---eeEEEEEecCCCcEEEEEEcCCcEEEeCC
Q 031374 97 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 97 ~yvl~---G~g~f~i~~~~~~~~~~~v~~GDli~iP~ 130 (160)
-|++. |+|...+++.. .-.+++||.|+|=+
T Consensus 60 TYvI~GerGSg~I~lNGAA----Ar~~~~GD~vII~a 92 (114)
T 3oug_A 60 TYVIKGEPNSKTIALNGPA----ARRCEIGDQLFIIS 92 (114)
T ss_dssp EEEEEECTTSCCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEEccCCCCEEEeCCHH----HhccCCCCEEEEEE
Confidence 45555 58899999875 57889999998754
No 224
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=50.42 E-value=53 Score=27.83 Aligned_cols=50 Identities=10% Similarity=-0.000 Sum_probs=38.7
Q ss_pred EEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 97 RYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 97 ~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
|.|++|..+..-++.++. ....++|+|-..|-|=++|.|+- +..+..+|.
T Consensus 358 Y~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~G--~GtVlkLgs 407 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWHG--TGTVLKFGS 407 (443)
T ss_dssp EEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEES--SEEEEEEEE
T ss_pred EEEecCceEEEecCCCCc-cceEECCCCceeecccccccccC--CceEEEecc
Confidence 557889888888865554 89999999999999999999983 234444443
No 225
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=50.42 E-value=77 Score=24.91 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=37.1
Q ss_pred ccceecCcceEEEEeeeeE-EEEEecCCC----------------------------cEEEEEEc----CCc--EEEeCC
Q 031374 86 YTEHIHADEEIRYCLEGSG-YFDVRDESD----------------------------QWIRIWIK----AGD--LIVLPA 130 (160)
Q Consensus 86 ~~~H~H~~~Ei~yvl~G~g-~f~i~~~~~----------------------------~~~~~~v~----~GD--li~iP~ 130 (160)
..+|.-..+|+.+...|.. .+.+-+.++ ..-++.+. +|+ -++||+
T Consensus 73 S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~ 152 (225)
T 3m3i_A 73 SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPG 152 (225)
T ss_dssp EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECT
T ss_pred cccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCC
Confidence 3444446899999999986 455544444 44566664 466 478999
Q ss_pred CCeeeeeeCC
Q 031374 131 GIYHRFTLDT 140 (160)
Q Consensus 131 g~~H~f~~~~ 140 (160)
|+........
T Consensus 153 G~WqaA~~~~ 162 (225)
T 3m3i_A 153 GAIFGSSVAA 162 (225)
T ss_dssp TCEEEEECCS
T ss_pred CEEEEEEECC
Confidence 9988876543
No 226
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=47.58 E-value=7.3 Score=31.58 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=22.6
Q ss_pred CcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 113 DQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 113 ~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
.+++.+.+++||+|+.-..+.|+...+.
T Consensus 219 ~~~v~~~~~aGd~v~f~~~~~H~s~~N~ 246 (319)
T 3gja_A 219 SQAYPMVLKPGEAVIFWSNTMHASLPHT 246 (319)
T ss_dssp --CCBCCBCTTEEEEEETTSCEEECCCC
T ss_pred CceeEeeECCCeEEEEcCCccccCCCCC
Confidence 3567889999999999999999976443
No 227
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=47.50 E-value=21 Score=29.08 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=35.8
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCC-CcEEEEEEec-CCcccC
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKVMQILS-YGVQRQ 157 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~-~~~~~ir~f~-~~p~w~ 157 (160)
-.+.|.+++. .+.+.+|++.++.....|+..+.++ .++..+.=+. ..+-|.
T Consensus 131 p~~~f~vdg~-----~~~m~~GE~w~~d~~~~H~v~N~g~~~RIhLv~D~~~~~~~wl 183 (290)
T 1e5r_A 131 PLAFHSNEDT-----VIHMRPGEIWFLDAATVHSAVNFSEISRQSLCVDFAFDGPFDE 183 (290)
T ss_dssp TTEEEEETTE-----EECCCTTEEEECCTTSCEEEEESSSSCCCEEEEEEBCSSCCCG
T ss_pred CCcEEEECCE-----EEecCCCCEEEEcCCCeeEEEcCCCCCeEEEEEEecccCCcCH
Confidence 3456667767 8999999999999999999887554 5555443232 234454
No 228
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=47.37 E-value=24 Score=27.12 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=30.9
Q ss_pred EEeeeeEEEEEecC--CCcEEEEEEcCCcEEEeCCCCeeee
Q 031374 98 YCLEGSGYFDVRDE--SDQWIRIWIKAGDLIVLPAGIYHRF 136 (160)
Q Consensus 98 yvl~G~g~f~i~~~--~~~~~~~~v~~GDli~iP~g~~H~f 136 (160)
.=+.+++.|.++.. ++..+.+.+..||+++.+....+++
T Consensus 136 vSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~ 176 (211)
T 3i3q_A 136 VSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFY 176 (211)
T ss_dssp EEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCC
T ss_pred EECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceE
Confidence 33557999999864 3568899999999999988876553
No 229
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=46.63 E-value=57 Score=26.60 Aligned_cols=41 Identities=17% Similarity=0.201 Sum_probs=33.1
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCe-eeeee
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY-HRFTL 138 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~-H~f~~ 138 (160)
.|-....+.|.|...++++ .+.+.+.|.+.||.|.. -.|..
T Consensus 79 rE~~iV~lgG~~~V~vdg~-----~f~lg~~dalYVp~G~~~v~~as 120 (289)
T 1ywk_A 79 RELGVINIGGPGFIEIDGA-----KETMKKQDGYYIGKETKHVRFSS 120 (289)
T ss_dssp EEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEE
T ss_pred cEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEe
Confidence 3445666789999999887 78999999999999977 45654
No 230
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=46.36 E-value=47 Score=25.18 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=26.3
Q ss_pred cceEEEEeeeeEEEEEecCCC--cEEEEEEcCCcEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD--QWIRIWIKAGDLI 126 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~--~~~~~~v~~GDli 126 (160)
.+.+++|++|+........++ ......+.+||++
T Consensus 198 ~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 198 GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 467999999999988654443 3566788999997
No 231
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=46.29 E-value=44 Score=27.46 Aligned_cols=57 Identities=16% Similarity=0.068 Sum_probs=38.6
Q ss_pred cceEEEEeeeeEEEEEecCCCc---EEEEEEcCCcEEEeCC--CCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPA--GIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~---~~~~~v~~GDli~iP~--g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+++ .+-..+.+||++=-.+ +.++..+......+.++++
T Consensus 83 ~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i 144 (469)
T 1o7f_A 83 GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRI 144 (469)
T ss_dssp CCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEE
T ss_pred CCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEE
Confidence 4679999999999988766653 6677899999874332 3344444444445666555
No 232
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=45.72 E-value=31 Score=29.18 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=27.1
Q ss_pred cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEE
Q 031374 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 114 ~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.++.-++||+|++-||.+|+.-+.+-+--.++-|
T Consensus 278 pv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNF 313 (381)
T 2ox0_A 278 PFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNF 313 (381)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEE
T ss_pred ceEEEEecCCCEEEECCCcEEEeecCcccHHHHhcc
Confidence 356888899999999999999976655444444443
No 233
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=45.38 E-value=24 Score=28.68 Aligned_cols=41 Identities=20% Similarity=0.103 Sum_probs=32.9
Q ss_pred ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCe-eeeeeC
Q 031374 94 EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY-HRFTLD 139 (160)
Q Consensus 94 ~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~-H~f~~~ 139 (160)
|=....+.|.|...++++ .+.+.+-|.+.||.|.. -.|..+
T Consensus 80 E~~iV~l~G~~~V~vdG~-----~f~lg~~dalYVp~g~~~v~~as~ 121 (282)
T 1xru_A 80 ELGVINIGGAGTITVDGQ-----CYEIGHRDALYVGKGAKEVVFASI 121 (282)
T ss_dssp EEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEES
T ss_pred EEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEec
Confidence 445566789999999887 78999999999999996 455543
No 234
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=44.41 E-value=44 Score=28.22 Aligned_cols=42 Identities=12% Similarity=-0.054 Sum_probs=27.4
Q ss_pred cEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCcccC
Q 031374 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQRQ 157 (160)
Q Consensus 114 ~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~w~ 157 (160)
.+.++.-++||+|++=||.+|+.-+.+-+--.++- -..|.|.
T Consensus 303 pv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvN--FA~~~Wl 344 (373)
T 3opt_A 303 RCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVN--FALEEWL 344 (373)
T ss_dssp CCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEE--ECCC---
T ss_pred ceEEEEECCCCEEEECCCceEEEEecCccHHHHHc--cCcHHHH
Confidence 35688889999999999999997665533333433 3345554
No 235
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=43.41 E-value=4 Score=30.13 Aligned_cols=30 Identities=20% Similarity=0.495 Sum_probs=23.0
Q ss_pred EEEee---eeEEEEEecCCCcEEEEEEcCCcEEEeCC
Q 031374 97 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 97 ~yvl~---G~g~f~i~~~~~~~~~~~v~~GDli~iP~ 130 (160)
-|++. |+|...+++.. .-.+++||.|+|=+
T Consensus 74 TYvI~GerGSG~I~lNGAA----Arl~~~GD~VII~s 106 (143)
T 1pqh_A 74 TYAIAAERGSRIISVNGAA----AHCASVGDIVIIAS 106 (143)
T ss_dssp EEEEEECTTCCCEECCGGG----GGTCCTTCEEEEEE
T ss_pred EEEEEccCCCceEEechHH----HccCCCCCEEEEEE
Confidence 35555 58999999875 67789999998743
No 236
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=42.53 E-value=31 Score=23.05 Aligned_cols=53 Identities=13% Similarity=-0.027 Sum_probs=34.0
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|......+ ++ +...+.+||++=-- .+..+.++......+.++++
T Consensus 64 ~~~~y~i~~G~v~~~~~---g~-~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i 119 (139)
T 3ocp_A 64 GSLVYVMEDGKVEVTKE---GV-KLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAI 119 (139)
T ss_dssp CCEEEEEEECCEEEEET---TE-EEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeCEEEEEEC---CE-EEEEeCCCCEeccHHHHCCCCcceEEEECcceEEEEE
Confidence 56899999999988543 33 45678999987321 23455555444455666655
No 237
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=42.06 E-value=76 Score=21.29 Aligned_cols=53 Identities=13% Similarity=0.080 Sum_probs=35.0
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCC---C--CeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA---G--IYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~---g--~~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|.......+ .+...+.+||++=-.+ + .++.++......+.++++
T Consensus 68 ~~~~y~i~~G~v~~~~~~----~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i 125 (160)
T 4f8a_A 68 VDSLCFVVSGSLEVIQDD----EVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVI 125 (160)
T ss_dssp CCEEEEEEESEEEEEETT----EEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEE
T ss_pred ccEEEEEEeeEEEEEECC----EEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEE
Confidence 468999999999987642 2456789999986432 2 344455444455666655
No 238
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=41.94 E-value=5.9 Score=26.65 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=22.4
Q ss_pred cceEEEEeeeeEEEEEecCCCc-EEEE--EEcCCcEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQ-WIRI--WIKAGDLI 126 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~-~~~~--~v~~GDli 126 (160)
.+.+++|++|...+... .+++ .+.. .+.+||++
T Consensus 47 ~~~~y~i~~G~v~~~~~-~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVTT-DGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEECC-SSCSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEEEc-CCCcceeeeeeeecCCCEe
Confidence 45799999999996533 3333 2222 78899986
No 239
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=41.63 E-value=20 Score=24.70 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=16.8
Q ss_pred EEEEecCCCcEEEEEEcCCcEEEeCC
Q 031374 105 YFDVRDESDQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 105 ~f~i~~~~~~~~~~~v~~GDli~iP~ 130 (160)
.+.+.++ .+.|++||+|.|+.
T Consensus 4 Ii~~gGk-----QykV~~Gd~i~vek 24 (103)
T 3r8s_R 4 VFQSGGK-----QHRVSEGQTVRLEK 24 (103)
T ss_dssp EEECSSS-----EEEEETTCEEEESC
T ss_pred EEEECCE-----EEEEeCCCEEEECC
Confidence 4556667 78999999999984
No 240
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=41.08 E-value=52 Score=26.22 Aligned_cols=51 Identities=22% Similarity=0.276 Sum_probs=32.2
Q ss_pred ceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCC-C----CeeeeeeCCCCcEEEEEEecCCc
Q 031374 94 EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA-G----IYHRFTLDTSNYVKVMQILSYGV 154 (160)
Q Consensus 94 ~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~-g----~~H~f~~~~~~~~~~ir~f~~~p 154 (160)
.-..||++|++. +++. ...+.+||++.+.. | ..=.+++.+ ...+| ||.++|
T Consensus 189 ~~~lyv~~G~v~--v~g~-----~~~l~~~d~~~~~~~~~~~~~~l~l~a~~--~a~~L-l~~G~P 244 (277)
T 2p17_A 189 NGFLYILEGSGV--FGAD-----NIEGKAGQALFFSRHNRGEETELNVTARE--KLRLL-LYAGEP 244 (277)
T ss_dssp EEEEEEEESEEE--ETTT-----TEEEETTEEEEECCCCTTCEEEEEEEESS--SEEEE-EEEECC
T ss_pred EEEEEEEeCeEE--ECCC-----ceEeCCCcEEEEcCCCCCccceEEEEeCC--CcEEE-EEeccc
Confidence 457899999865 4542 24688999999986 6 333444443 34443 566554
No 241
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=41.00 E-value=3.2 Score=28.69 Aligned_cols=30 Identities=37% Similarity=0.676 Sum_probs=22.9
Q ss_pred EEEee---eeEEEEEecCCCcEEEEEEcCCcEEEeCC
Q 031374 97 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 97 ~yvl~---G~g~f~i~~~~~~~~~~~v~~GDli~iP~ 130 (160)
-|++. |+|...+++.. .-.+++||.|+|=+
T Consensus 33 TYvI~GerGSG~I~lNGAA----Arl~~~GD~vII~a 65 (96)
T 1vc3_B 33 TYALPGERGSGVIGINGAA----AHLVKPGDLVILVA 65 (96)
T ss_dssp EECEEECTTTTCEEEEGGG----GGTCCTTCEEEEEE
T ss_pred EEEEEccCCCCeEEEchHH----HccCCCCCEEEEEE
Confidence 35555 57999999875 67889999998743
No 242
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=40.85 E-value=17 Score=30.16 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=30.4
Q ss_pred eeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCee
Q 031374 100 LEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYH 134 (160)
Q Consensus 100 l~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H 134 (160)
|-+++.|.++..++..+.+.+.+||+++++....+
T Consensus 230 LG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~ 264 (345)
T 3tht_A 230 LGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRY 264 (345)
T ss_dssp ESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHH
T ss_pred CCCceeEEEccCCCceEEEEcCCCcEEEEChHHhh
Confidence 45799999998777889999999999999998663
No 243
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=40.39 E-value=79 Score=24.04 Aligned_cols=57 Identities=12% Similarity=0.062 Sum_probs=37.6
Q ss_pred cceEEEEeeeeEEEEEec-CCC-cEEEEEEcCCcEEE---eCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRD-ESD-QWIRIWIKAGDLIV---LPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~-~~~-~~~~~~v~~GDli~---iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|+......+ .++ ..+.-.+.+||++= +=.+.++..+......+.++++
T Consensus 198 ~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i 259 (299)
T 3shr_A 198 GDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVI 259 (299)
T ss_dssp ECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEE
T ss_pred CCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEE
Confidence 357899999999988875 233 45567899999872 1124445555544556666655
No 244
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=39.94 E-value=24 Score=24.27 Aligned_cols=22 Identities=5% Similarity=0.104 Sum_probs=17.3
Q ss_pred EEEEEecCCCcEEEEEEcCCcEEEeCC
Q 031374 104 GYFDVRDESDQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 104 g~f~i~~~~~~~~~~~v~~GDli~iP~ 130 (160)
+.+.+.++ .+.+++||+|.|+.
T Consensus 3 AIi~~gGk-----QykV~~Gd~i~vek 24 (101)
T 3v2d_V 3 AIVKTGGK-----QYRVEPGLKLRVEK 24 (101)
T ss_dssp EEEEETTE-----EEEECTTCEEEESC
T ss_pred EEEEeCCE-----EEEEeCCCEEEECC
Confidence 34566777 79999999999984
No 245
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=39.87 E-value=7.7 Score=31.34 Aligned_cols=37 Identities=19% Similarity=0.009 Sum_probs=27.3
Q ss_pred EEEEEEcCCcEEEeCCCCeeeeeeC--CC-CcEEEEEEec
Q 031374 115 WIRIWIKAGDLIVLPAGIYHRFTLD--TS-NYVKVMQILS 151 (160)
Q Consensus 115 ~~~~~v~~GDli~iP~g~~H~f~~~--~~-~~~~~ir~f~ 151 (160)
++.+.+++||+++.-..+.|+...+ +. .....++|..
T Consensus 229 ~v~~~~~aGdvl~f~~~~~H~s~~N~S~~~R~~l~~~y~~ 268 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNS 268 (310)
T ss_dssp CBCCCBSTTCEEEEETTCCEEECCCCSSCCCCEEEEEEEE
T ss_pred eEEeeeCCceEEEEeCCceecCCCCCCCCCeEEEEEEEeC
Confidence 6788999999999999999997643 22 3344556644
No 246
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=39.60 E-value=3.7 Score=28.67 Aligned_cols=31 Identities=13% Similarity=0.267 Sum_probs=23.7
Q ss_pred EEEee--eeEEEEEecCCCcEEEEEEcCCcEEEeCCC
Q 031374 97 RYCLE--GSGYFDVRDESDQWIRIWIKAGDLIVLPAG 131 (160)
Q Consensus 97 ~yvl~--G~g~f~i~~~~~~~~~~~v~~GDli~iP~g 131 (160)
-|++. |+|...+++.. .-.+++||.|+|=+-
T Consensus 33 TYvI~GeGSG~I~lNGAA----Arl~~~GD~vII~aY 65 (102)
T 3plx_B 33 TYTIATQEEGVVCLNGAA----ARLAEVGDKVIIMSY 65 (102)
T ss_dssp EECEEESSTTCEEEEGGG----GGGCCTTCEEEEEEE
T ss_pred EEEEEcCCCCEEEeCcHH----HhccCCCCEEEEEEc
Confidence 45555 57889999875 678899999988654
No 247
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=39.52 E-value=75 Score=22.91 Aligned_cols=53 Identities=17% Similarity=0.113 Sum_probs=35.5
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeC---CCC--eeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGI--YHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP---~g~--~H~f~~~~~~~~~~ir~ 149 (160)
...+++|++|......++ .+...+.+||++=-. .+. .+.+++.....+.++++
T Consensus 116 ~~~ly~I~~G~v~v~~~~----~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i 173 (212)
T 3ukn_A 116 LQAIYFVCSGSMEVLKDN----TVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYI 173 (212)
T ss_dssp CCEEEEEEECCEEEESSS----CEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEE
T ss_pred ccEEEEEEecEEEEEECC----eEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEE
Confidence 568999999999887543 335678999987432 233 55555555556666655
No 248
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=37.96 E-value=83 Score=24.81 Aligned_cols=42 Identities=10% Similarity=0.075 Sum_probs=27.8
Q ss_pred eEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 95 EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 95 Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
-..||++|++.+ ++.++. ...+.+||.+.+-.+..=.+++.+
T Consensus 204 ~~l~v~~G~v~v--~g~~~~--~~~l~~gd~~~l~~~~~l~l~a~~ 245 (256)
T 2vec_A 204 AYLQSIHGKFHA--LTHHEE--KAALTCGDGAFIRDEANITLVADS 245 (256)
T ss_dssp EEEEEEESCEEE--EETTEE--EEEECTTCEEEEESCSEEEEEESS
T ss_pred EEEEEEECEEEE--CCcccc--ceEECCCCEEEECCCCeEEEEeCC
Confidence 567888998875 331100 356899999999877654555543
No 249
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=37.11 E-value=11 Score=27.51 Aligned_cols=57 Identities=7% Similarity=-0.060 Sum_probs=34.5
Q ss_pred cceEEEEeeeeEEEEEecCCC-cEEEEEEcCCcEEEeCC---CCe-eeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPA---GIY-HRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~-~~~~~~v~~GDli~iP~---g~~-H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+.+| ..+--.+.+||++-..+ +.+ +.++......+.++++
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 111 (227)
T 3dkw_A 50 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRF 111 (227)
T ss_dssp CCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCCEEEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcEEEEEE
Confidence 467999999999887654433 34456788999874322 333 4444333334444444
No 250
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=36.44 E-value=18 Score=31.08 Aligned_cols=15 Identities=33% Similarity=0.802 Sum_probs=13.2
Q ss_pred EcCCcEEEeCCCCee
Q 031374 120 IKAGDLIVLPAGIYH 134 (160)
Q Consensus 120 v~~GDli~iP~g~~H 134 (160)
.++||.|.||+|.++
T Consensus 54 A~pGdvI~L~~G~Y~ 68 (410)
T 2inu_A 54 ARPGAAIIIPPGDYD 68 (410)
T ss_dssp SCCCEEEECCSEEEE
T ss_pred CCCCCEEEECCCeec
Confidence 458999999999997
No 251
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=36.17 E-value=1.3e+02 Score=22.16 Aligned_cols=56 Identities=11% Similarity=0.095 Sum_probs=39.3
Q ss_pred Ccccceec-CcceEEEEeeee-EEEEEecCCCcEEEEEEc----CCcE--EEeCCCCeeeeeeC
Q 031374 84 NFYTEHIH-ADEEIRYCLEGS-GYFDVRDESDQWIRIWIK----AGDL--IVLPAGIYHRFTLD 139 (160)
Q Consensus 84 ~~~~~H~H-~~~Ei~yvl~G~-g~f~i~~~~~~~~~~~v~----~GDl--i~iP~g~~H~f~~~ 139 (160)
.+..+|.= ..+||.+...|. ..+.+-..++..-++.+. +|+. ++||+|+.......
T Consensus 51 ~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~ 114 (154)
T 1znp_A 51 VRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESL 114 (154)
T ss_dssp CCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECTTCEEEEEES
T ss_pred CCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcCCEEEEeeEC
Confidence 34556665 789999999997 455555455555556664 4654 89999999987655
No 252
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=35.88 E-value=54 Score=24.81 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=33.8
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEE---eCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV---LPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~---iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|......++ + ....+.+||++= +-.+.++..+......+.++++
T Consensus 80 ~~~~y~i~~G~v~~~~~g---~-~~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~i 135 (291)
T 2qcs_B 80 GDNFYVIDQGEMDVYVNN---E-WATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGI 135 (291)
T ss_dssp CCEEEEEEECCEEEEETT---E-EEEEECTTCEECGGGGTCCCBCSSEEEESSCEEEEEE
T ss_pred CceEEEEeeeEEEEEECC---e-EEEEcCCCCccchHHHhcCCCCceEEEECCCEEEEEE
Confidence 467999999999887743 2 356789999873 2234444444444445555554
No 253
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=35.72 E-value=86 Score=24.42 Aligned_cols=37 Identities=8% Similarity=-0.016 Sum_probs=26.3
Q ss_pred eEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCC
Q 031374 95 EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (160)
Q Consensus 95 Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~ 140 (160)
-..|+++|++.+ ++ ..+++||++.+..+..=.+++.+
T Consensus 183 ~~~~v~~G~v~v--~g-------~~l~~gd~~~~~~~~~l~l~a~~ 219 (242)
T 1tq5_A 183 VWIQVVKGNVTI--NG-------VKASTSDGLAIWDEQAISIHADS 219 (242)
T ss_dssp EEEEEEESEEEE--TT-------EEEETTCEEEEESCSCEEEEESS
T ss_pred EEEEEccCcEEE--CC-------EEeCCCCEEEECCCCeEEEEeCC
Confidence 458899998765 32 35889999999877654555543
No 254
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=34.55 E-value=52 Score=23.97 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=34.0
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEE----eCCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV----LPAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~----iP~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|+......+.+ ....+.+||++= +. +.+...+......+.++.+
T Consensus 166 ~~~~y~I~~G~v~v~~~~~~---~~~~l~~g~~fGe~~~~~-~~~~~~~v~a~~~~~~~~i 222 (246)
T 3of1_A 166 GENFYLIEYGAVDVSKKGQG---VINKLKDHDYFGEVALLN-DLPRQATVTATKRTKVATL 222 (246)
T ss_dssp CCEEEEEEECEEEEEETTTE---EEEEEETTCEECHHHHHH-TCBCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEecEEEEEEcCCc---eEEEcCCCCcccHHHHhC-CCCcccEEEECCCEEEEEE
Confidence 46789999999988776432 467789999872 11 3445445444445666554
No 255
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=34.52 E-value=35 Score=22.56 Aligned_cols=51 Identities=14% Similarity=0.228 Sum_probs=32.1
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.......+ ...+.+||++=.- .+.++.++......+.++++
T Consensus 52 ~~~~y~i~~G~v~~~~~~------~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i 105 (138)
T 1vp6_A 52 GDRMFFVVEGSVSVATPN------PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSL 105 (138)
T ss_dssp CCEEEEEEESCEEECSSS------CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEeCC------cceECCCCEeeehHhccCCCceeEEEECCCEEEEEE
Confidence 467999999999887553 3578999986321 23344444433445666655
No 256
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=34.47 E-value=57 Score=23.43 Aligned_cols=52 Identities=13% Similarity=0.121 Sum_probs=36.2
Q ss_pred ceecC-cceEEEEeeeeEEEEEecC-------------CCc--------EEEEEEcCCcEEEeCCCCeeeeeeC
Q 031374 88 EHIHA-DEEIRYCLEGSGYFDVRDE-------------SDQ--------WIRIWIKAGDLIVLPAGIYHRFTLD 139 (160)
Q Consensus 88 ~H~H~-~~Ei~yvl~G~g~f~i~~~-------------~~~--------~~~~~v~~GDli~iP~g~~H~f~~~ 139 (160)
.-.|. .--|-|+++|+=.+.+... .|- --.+.+.+|++++.-|+-.|+....
T Consensus 62 ~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~~ 135 (155)
T 1s4c_A 62 AELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCCV 135 (155)
T ss_dssp EEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccccc
Confidence 44454 5688888999776665421 011 1357889999999999999997654
No 257
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=33.77 E-value=1.2e+02 Score=24.96 Aligned_cols=57 Identities=5% Similarity=-0.172 Sum_probs=35.4
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~i---P~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|.....+...+...+.-.+.+||++=- =.+.++..+......+.++++
T Consensus 186 ~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fGe~all~~~pr~atv~A~~d~~l~~i 245 (416)
T 3tnp_B 186 GDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPKAATITATSPGALWGL 245 (416)
T ss_dssp CCEEEEEEECEEEEEEECSSCEEEEEEEESCCEECGGGGTSCCCCSSEEEESSSEEEEEE
T ss_pred CceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEeeHHHhcCCCcccEEEEccCeEEEEE
Confidence 467899999999988853333455567899997631 124444444444445555554
No 258
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=33.55 E-value=38 Score=24.75 Aligned_cols=53 Identities=11% Similarity=-0.065 Sum_probs=33.5
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~i---P~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|......++. . ...+.+||++=- -.+.++..+......+.++++
T Consensus 48 ~~~~y~i~~G~v~v~~~~~---~-~~~~~~g~~fGe~~l~~~~~~~~tv~a~~~~~~~~i 103 (246)
T 3of1_A 48 GDYFYVVEKGTVDFYVNDN---K-VNSSGPGSSFGELALMYNSPRAATVVATSDCLLWAL 103 (246)
T ss_dssp CCEEEEEEECCEEEESTTS---C-CEEECTTCEECHHHHHHTCCCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEECCE---E-EEecCCCCeeehhHHhcCCCCCcEEEECCCeEEEEE
Confidence 5689999999999876543 2 367899998731 113444444444445555554
No 259
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=33.23 E-value=36 Score=23.38 Aligned_cols=39 Identities=26% Similarity=0.412 Sum_probs=26.1
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
|.|.. ..+++.+.+.++.||.++.+..----+..+.+.|
T Consensus 49 G~G~~---~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dgeey 87 (100)
T 1we3_O 49 GTGRV---LENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEY 87 (100)
T ss_dssp CCCEE---CTTSCEECCSCCTTCEEEECTTCSEEEECSSCEE
T ss_pred CCCcC---CCCCCEEeeecCCCCEEEECCCCCeEEEECCEEE
Confidence 66643 2355666778999999999986555566555443
No 260
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=32.59 E-value=20 Score=25.41 Aligned_cols=27 Identities=37% Similarity=0.624 Sum_probs=21.5
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeee
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRF 136 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f 136 (160)
|.|.|.|++. ++. |++++.|.|+..|-
T Consensus 22 ~~g~f~i~g~-----~~~---g~i~v~p~~~~~W~ 48 (128)
T 2fi9_A 22 GNGGFRFADM-----SHR---GSIICIPSGIYGID 48 (128)
T ss_dssp ETTEEEETTE-----EEE---SEEEEETTEEEEEC
T ss_pred cCCEEEECCE-----EEE---eCEEEeCCCeeccC
Confidence 6788888865 543 99999999997774
No 261
>2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens}
Probab=32.42 E-value=26 Score=25.35 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=22.4
Q ss_pred EEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCcc
Q 031374 117 RIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGVQ 155 (160)
Q Consensus 117 ~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p~ 155 (160)
+..+.||..++||. -|..+.+..| +||+|+..|.
T Consensus 109 ~~~L~pG~YvIVPS----Tf~P~~eg~F-~LrVfs~~~~ 142 (148)
T 2qfe_A 109 LENIPSGIFNIIPS----TFLPKQEGPF-FLDFNSIIPI 142 (148)
T ss_dssp EEEECSEEEEEEEE----ESSTTCCEEE-EEEEEESSCC
T ss_pred EEEcCCCCEEEEec----cCCCCCccce-EEEEEeCCCC
Confidence 57788899888883 3444443333 5788888763
No 262
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=32.17 E-value=6.3 Score=28.93 Aligned_cols=31 Identities=29% Similarity=0.566 Sum_probs=23.8
Q ss_pred EEEee---eeEEEEEecCCCcEEEEEEcCCcEEEeCCC
Q 031374 97 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLPAG 131 (160)
Q Consensus 97 ~yvl~---G~g~f~i~~~~~~~~~~~v~~GDli~iP~g 131 (160)
-|++. |+|...+++.. .-.+++||.|+|=+-
T Consensus 57 TYvI~GerGSG~I~lNGAA----Arl~~~GD~vII~aY 90 (139)
T 2c45_A 57 TYAITGERGSGVIGINGAA----AHLVHPGDLVILIAY 90 (139)
T ss_dssp ECEEEECTTTTCEEEESST----TTTSCTTCEEEEEEC
T ss_pred EEEEEccCCCCEEEEchHH----HccCCCCCEEEEEEC
Confidence 34554 58999999976 578899999988654
No 263
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=31.55 E-value=1.2e+02 Score=21.15 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=28.9
Q ss_pred ceEEEEeee-eE-EEEEecCCCcEEEEEEcCCcEE-EeCCCCeeeeeeC
Q 031374 94 EEIRYCLEG-SG-YFDVRDESDQWIRIWIKAGDLI-VLPAGIYHRFTLD 139 (160)
Q Consensus 94 ~Ei~yvl~G-~g-~f~i~~~~~~~~~~~v~~GDli-~iP~g~~H~f~~~ 139 (160)
.||..+..| .| .|.+.-. .+.+++||-| +++.+..|.+...
T Consensus 3 ~~v~ml~~g~~G~~~~F~P~-----~i~V~~GDTV~f~n~~~~Hnv~~~ 46 (124)
T 3ef4_A 3 HIVEMRNKDDAGNTMVFQPG-----FVKVEAGDTVKFVPTDKSHNAESV 46 (124)
T ss_dssp EEEEEEEECTTSCEEEEESS-----EEEECTTCEEEEECSSSSCCCEEC
T ss_pred EEEEEEEcCCCCceeEEeCC-----EEEECCCCEEEEEECCCCccEEEe
Confidence 456666665 34 4666645 8999999987 5666788988764
No 264
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=30.78 E-value=56 Score=25.28 Aligned_cols=36 Identities=14% Similarity=0.376 Sum_probs=29.2
Q ss_pred EEeeeeEEEEEecCC----------CcEEEEEEcCCcEEEeCCCCe
Q 031374 98 YCLEGSGYFDVRDES----------DQWIRIWIKAGDLIVLPAGIY 133 (160)
Q Consensus 98 yvl~G~g~f~i~~~~----------~~~~~~~v~~GDli~iP~g~~ 133 (160)
.=|.+++.|.++... +..+.+.+..||+++......
T Consensus 159 lSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r 204 (238)
T 2iuw_A 159 LSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQ 204 (238)
T ss_dssp EEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHH
T ss_pred EECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhh
Confidence 335589999997654 368899999999999999874
No 265
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=30.01 E-value=20 Score=25.78 Aligned_cols=27 Identities=26% Similarity=0.421 Sum_probs=21.0
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeee
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRF 136 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f 136 (160)
|.|.|.|++. ++ .|++|+.|.|+..|-
T Consensus 20 ~~g~f~ing~-----~~---~gsilv~p~~~~~W~ 46 (135)
T 2fvt_A 20 GKGGFYFAGM-----SH---QGSLLFLPDAVWGWD 46 (135)
T ss_dssp ETTEEECSSS-----EE---CSEEEECSSCEEEES
T ss_pred cCCEEEECCE-----EE---EeCEEEeCCCccccC
Confidence 5678888766 44 499999999997774
No 266
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=29.55 E-value=41 Score=22.94 Aligned_cols=39 Identities=18% Similarity=0.252 Sum_probs=25.5
Q ss_pred eeeEEEEEecCCCcEEEEEEcCCcEEEeCC-CCeeeeeeCCCC
Q 031374 101 EGSGYFDVRDESDQWIRIWIKAGDLIVLPA-GIYHRFTLDTSN 142 (160)
Q Consensus 101 ~G~g~f~i~~~~~~~~~~~v~~GDli~iP~-g~~H~f~~~~~~ 142 (160)
=|.|.. ..+++.+...++.||.++.+. .----+..+.+.
T Consensus 43 VG~G~~---~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dgee 82 (97)
T 1pcq_O 43 VGNGRI---LENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEE 82 (97)
T ss_dssp ECSEEC---TTSSSCEECSCCTTCEEEECCCSSCEEEEETTEE
T ss_pred EcCcee---cCCCCEEecccCCCCEEEECCccCCeEEEECCEE
Confidence 366653 245666678899999999999 333345555543
No 267
>2cyj_A Hypothetical protein PH1505; conserved hypothetical protein, structural genomics, NPPSFA; HET: OCS; 1.50A {Pyrococcus horikoshii} SCOP: c.103.1.1
Probab=28.25 E-value=22 Score=24.92 Aligned_cols=24 Identities=17% Similarity=0.461 Sum_probs=18.9
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCe
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY 133 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~ 133 (160)
|.|.|.|++. ++ .||+|+.|.|+.
T Consensus 7 g~G~~~i~g~-----~~---~~sviv~p~g~v 30 (118)
T 2cyj_A 7 RFGLVKIDGK-----EF---DHDIVIYPSGRI 30 (118)
T ss_dssp ETTEEEETTE-----EE---SSCEEECTTSCE
T ss_pred cCCEEEECCE-----EE---eeCEEEeCCCcc
Confidence 6788888865 44 489999999983
No 268
>1l7l_A PA-I galactophilic lectin; agglutinin, single wavelength anomalous scattering phasing, structural genomics, PSI; 1.50A {Pseudomonas aeruginosa} SCOP: b.18.1.16 PDB: 1oko_A* 1uoj_A 2vxj_A* 2wyf_A* 3zyh_A* 3zyb_A* 3zyf_A*
Probab=27.90 E-value=42 Score=23.69 Aligned_cols=27 Identities=30% Similarity=0.369 Sum_probs=19.6
Q ss_pred EEEEEecCCCcEEEEEEcCCcEEEeCC
Q 031374 104 GYFDVRDESDQWIRIWIKAGDLIVLPA 130 (160)
Q Consensus 104 g~f~i~~~~~~~~~~~v~~GDli~iP~ 130 (160)
|..-.+.++++.--+.+++||+|.|=|
T Consensus 4 G~VpAn~e~Gq~Tglilk~GDvIsIvA 30 (121)
T 1l7l_A 4 GEVLANNEAGQVTSIIYNPGDVITIVA 30 (121)
T ss_dssp EEEETTCTTCEEEEEEECTTCCEEEEE
T ss_pred ccccchhcCCCeeeEEecCCCEEEEee
Confidence 344445566777789999999998743
No 269
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=27.45 E-value=26 Score=24.39 Aligned_cols=24 Identities=21% Similarity=0.242 Sum_probs=19.0
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCe
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY 133 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~ 133 (160)
|.|.|.|++. ++. ||+|+.|.|+.
T Consensus 8 g~G~~~i~g~-----~~~---~sviv~p~g~v 31 (113)
T 1ihn_A 8 RFGSVTYRGR-----EYR---SDIVVHVDGSV 31 (113)
T ss_dssp ETTEEEETTE-----EEC---SCEEECTTSCE
T ss_pred cCCEEEECCE-----EEe---eCEEEeCCCcc
Confidence 6778888866 443 89999999983
No 270
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=27.20 E-value=1.1e+02 Score=18.84 Aligned_cols=53 Identities=11% Similarity=0.035 Sum_probs=33.6
Q ss_pred HhHHhhcCcEEEecCCCCC---CChHHHHHHHHhcCCc-----eeeeeee-CCCcccCHHHH
Q 031374 29 LDQLAELGVLYWRLNPKNY---ENDEELQKIREARGYS-----YMDLLDL-CPEKVTNYEEK 81 (160)
Q Consensus 29 ~~~L~~~GV~~w~~~~~~~---~~~~~l~~l~~~~gy~-----~~dvi~v-~~~~~p~~~~~ 81 (160)
...|++.||.|-.++.+.. .+.+..+.|++..|+. +.=+|.+ ....++.|...
T Consensus 21 k~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l 82 (87)
T 1aba_A 21 KRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQL 82 (87)
T ss_dssp HHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHH
T ss_pred HHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHH
Confidence 4678899999866665532 1234456677777877 5666666 55555555553
No 271
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=26.19 E-value=30 Score=25.51 Aligned_cols=27 Identities=26% Similarity=0.466 Sum_probs=21.3
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCC-eeee
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGI-YHRF 136 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~-~H~f 136 (160)
|.|.|.|++. ++ .|++++.|.|+ .+|-
T Consensus 18 ~~g~~~ing~-----~~---~gsv~v~p~g~v~~W~ 45 (150)
T 3cpk_A 18 GDGYIEVNQV-----RF---SHAIAFAPEGPVASWP 45 (150)
T ss_dssp ETTEEEETTE-----EE---CSCEEECSSSCCEECC
T ss_pred cCCEEEECCE-----EE---EcCEEEecCCceeecC
Confidence 7888999865 44 49999999998 5554
No 272
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=25.88 E-value=1.1e+02 Score=24.43 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=29.8
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEecCCc
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQILSYGV 154 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f~~~p 154 (160)
..-..||++|++.+ ++... ...+.++.++++.+|..=.+.+.......+| |+.++|
T Consensus 190 ~~~~lyv~~G~v~v--~g~~~---~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~L-Ll~G~P 245 (290)
T 1j1l_A 190 WTSFIYTISGDVYI--GPDDA---QQKIEPHHTAVLGEGDSVQVENKDPKRSHFV-LIAGEP 245 (290)
T ss_dssp CEEEEEEEESCEEE--SCTTS---CEEECTTEEEEECSCSEEEEECCSSSCEEEE-EEEECC
T ss_pred CEEEEEEEeCeEEE--CCccc---ceeccCceEEEecCCCEEEEEEcCCCCcEEE-EEEccc
Confidence 34678999999875 43210 1345566666666664433332223344444 455544
No 273
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=25.61 E-value=90 Score=23.71 Aligned_cols=53 Identities=13% Similarity=-0.027 Sum_probs=32.9
Q ss_pred cceEEEEeeeeEEEEEecCCCcEEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~~~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|......++ + ....+.+||++=-- .+.+...+......+.++++
T Consensus 80 ~~~~yiI~~G~v~v~~~g---~-~~~~~~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i 135 (299)
T 3shr_A 80 GSLVYVMEDGKVEVTKEG---V-KLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAI 135 (299)
T ss_dssp CCCEEEEEESCEEEEETT---E-EEEEECTTCEESCSGGGTTTBCCSEEEESSCEEEEEE
T ss_pred CceEEEEEEEEEEEEECC---E-EEEEeCCCCeeeHhHHhcCCCCCcEEEEcCCeEEEEE
Confidence 467899999999885543 2 35678999987422 23444444444445555554
No 274
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=25.53 E-value=43 Score=22.75 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=26.2
Q ss_pred eeEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeeeeCCCCc
Q 031374 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~~~~~~~ 143 (160)
|.|... .+++.+.+.++.||.++.+..--.-+..+...|
T Consensus 44 G~G~~~---~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ey 82 (95)
T 3nx6_A 44 GAGKPL---DNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEY 82 (95)
T ss_dssp CSCEEC---TTSCEECCSCCTTCEEEECTTCSEEEEETTEEE
T ss_pred CCCeEC---CCCCEEccccCCCCEEEECCcCCeEEEECCEEE
Confidence 555543 345566778999999999986555566665443
No 275
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=25.17 E-value=88 Score=20.69 Aligned_cols=53 Identities=11% Similarity=0.130 Sum_probs=34.4
Q ss_pred HhHHhhcCcEEEecCCCCCCChHHH-HHHHHhcCCceeeeeeeCCCcccCHHHH
Q 031374 29 LDQLAELGVLYWRLNPKNYENDEEL-QKIREARGYSYMDLLDLCPEKVTNYEEK 81 (160)
Q Consensus 29 ~~~L~~~GV~~w~~~~~~~~~~~~l-~~l~~~~gy~~~dvi~v~~~~~p~~~~~ 81 (160)
...|+++||.|-.++.+..++...+ +.|++..|..+.=.+-+....++.+...
T Consensus 34 k~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g~~igG~d~l 87 (114)
T 3h8q_A 34 KELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQT 87 (114)
T ss_dssp HHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETTEEEESHHHH
T ss_pred HHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEECCEEEeCHHHH
Confidence 4678888998866665543333444 4566667877777777776666666543
No 276
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=23.33 E-value=92 Score=25.68 Aligned_cols=34 Identities=6% Similarity=0.008 Sum_probs=23.4
Q ss_pred cceEEEEeeeeEEEEEecCC------C-cEEEEEEcCCcEE
Q 031374 93 DEEIRYCLEGSGYFDVRDES------D-QWIRIWIKAGDLI 126 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~------~-~~~~~~v~~GDli 126 (160)
.+.+++|++|++.....+.+ + ......+.+||++
T Consensus 308 ~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 308 ADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred CCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 46799999999998776442 2 3445678999987
No 277
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=22.93 E-value=96 Score=25.09 Aligned_cols=57 Identities=11% Similarity=-0.001 Sum_probs=34.9
Q ss_pred cceEEEEeeeeEEEEEecCCC--cEEEEEEcCCcEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 031374 93 DEEIRYCLEGSGYFDVRDESD--QWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKVMQI 149 (160)
Q Consensus 93 ~~Ei~yvl~G~g~f~i~~~~~--~~~~~~v~~GDli~iP---~g~~H~f~~~~~~~~~~ir~ 149 (160)
.+.+++|++|+........++ ......+.+||++=-- .+.+..++......+.++.+
T Consensus 289 ~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~all~~~~r~~tv~A~~~~~ll~i 350 (381)
T 4din_B 289 GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPLKCVKL 350 (381)
T ss_dssp CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTTGGGSCCBCSSEEEESSCBEEEEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechHHHhCCCCceeEEEEcCCEEEEEE
Confidence 467999999999988765433 3445678999987211 13344444433444555544
No 278
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=22.43 E-value=68 Score=24.21 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=28.6
Q ss_pred EEeeeeEEEEEecCC---------CcEEEEEEcCCcEEEeCCCCee
Q 031374 98 YCLEGSGYFDVRDES---------DQWIRIWIKAGDLIVLPAGIYH 134 (160)
Q Consensus 98 yvl~G~g~f~i~~~~---------~~~~~~~v~~GDli~iP~g~~H 134 (160)
.=+.+++.|.++... +..+.+.+..||+++.+.+...
T Consensus 133 vSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~ 178 (204)
T 3s57_A 133 VSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNT 178 (204)
T ss_dssp EEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHH
T ss_pred EECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhh
Confidence 335579999998532 2467999999999999998754
No 279
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=21.41 E-value=36 Score=23.68 Aligned_cols=14 Identities=29% Similarity=0.527 Sum_probs=11.2
Q ss_pred EEcCCcEEEeCCCC
Q 031374 119 WIKAGDLIVLPAGI 132 (160)
Q Consensus 119 ~v~~GDli~iP~g~ 132 (160)
.+.+||+|.|.+|.
T Consensus 41 ~l~~GDiv~v~~G~ 54 (124)
T 2kij_A 41 LVQRGDIIKVVPGG 54 (124)
T ss_dssp TCCTTCEEECCTTC
T ss_pred HCCCCCEEEECCCC
Confidence 46789999988884
No 280
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=21.30 E-value=1e+02 Score=23.41 Aligned_cols=65 Identities=12% Similarity=0.190 Sum_probs=45.7
Q ss_pred eeeeeeeCCCcccCHHHHhcCcccceecC-cceEEE----Eeee-eEEEEEecCCCcEEEEEEcCCcEEEeCCCCeeeee
Q 031374 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHA-DEEIRY----CLEG-SGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFT 137 (160)
Q Consensus 64 ~~dvi~v~~~~~p~~~~~~~~~~~~H~H~-~~Ei~y----vl~G-~g~f~i~~~~~~~~~~~v~~GDli~iP~g~~H~f~ 137 (160)
..-...+.|+ .....|... .-.+++ ++-. .+.+.|+++ ....+.|..++.-....|+..
T Consensus 103 ~a~fs~L~pG----------~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~~-----~~~w~eGe~~~fDds~~Hev~ 167 (197)
T 3rcq_A 103 QIKYSIMHPG----------THVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANE-----TKTWEEGKVLIFDDSFEHEVW 167 (197)
T ss_dssp EEEEEEECTT----------EEEEEECCSCTTEEEEEEEEECCSSSEEEEETTE-----EECCCBTCEEEECTTSCEEEE
T ss_pred eEEEEEeCCC----------CCcCCeeCCCCCeEEEEEEEEeCCCCcEEEECCE-----EEEeeCCcEEEEcCCeEEEEE
Confidence 4555666665 345667665 344444 2223 688999988 899999999999999999987
Q ss_pred eCCCCc
Q 031374 138 LDTSNY 143 (160)
Q Consensus 138 ~~~~~~ 143 (160)
+.++..
T Consensus 168 N~~d~~ 173 (197)
T 3rcq_A 168 QDASSF 173 (197)
T ss_dssp ECSSSC
T ss_pred ECCCCC
Confidence 755443
No 281
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=20.71 E-value=85 Score=24.56 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=26.6
Q ss_pred EEEEEcCCcEEEeCCCCeeeeee-CCCCcEEEEEEec
Q 031374 116 IRIWIKAGDLIVLPAGIYHRFTL-DTSNYVKVMQILS 151 (160)
Q Consensus 116 ~~~~v~~GDli~iP~g~~H~f~~-~~~~~~~~ir~f~ 151 (160)
..+..++|++|+.|.+..|.... ..+....+.-.|.
T Consensus 158 ~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 158 QSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEE
T ss_pred EEEecCCCEEEEECCCCeEcCccccccCEEEEEEehh
Confidence 36788999999999999999764 4445555554443
No 282
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=20.59 E-value=24 Score=24.86 Aligned_cols=27 Identities=22% Similarity=0.140 Sum_probs=20.3
Q ss_pred eeEEEEEecCCCcEEEEEEcCC-cEEEeCCCCeeee
Q 031374 102 GSGYFDVRDESDQWIRIWIKAG-DLIVLPAGIYHRF 136 (160)
Q Consensus 102 G~g~f~i~~~~~~~~~~~v~~G-Dli~iP~g~~H~f 136 (160)
|.|.|.|++. ++. | |+++.|.|+..|-
T Consensus 10 ~~g~~~ing~-----~~~---~~siiv~p~~~~~w~ 37 (122)
T 2ab1_A 10 SWGQMKVKGS-----NTT---YKDCKVWPGGSRTWD 37 (122)
T ss_dssp ETTEEEETTC-----SCE---ESEEEEETTEEEEEC
T ss_pred cCCEEEECCE-----EEe---CCCEEEECCccccCc
Confidence 5677888865 443 7 9999999987754
No 283
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=20.55 E-value=50 Score=27.56 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=27.6
Q ss_pred EEEEEcCCcEEEeCCCCeeeee--eC-CCCc--EEEEEEecCCcc
Q 031374 116 IRIWIKAGDLIVLPAGIYHRFT--LD-TSNY--VKVMQILSYGVQ 155 (160)
Q Consensus 116 ~~~~v~~GDli~iP~g~~H~f~--~~-~~~~--~~~ir~f~~~p~ 155 (160)
+.-.+++||.|+.-.++.|+.. .+ .... .-.+|+..+.-.
T Consensus 234 ~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~RfvGDDar 278 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRLVDYDTR 278 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEEEETTCB
T ss_pred ccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEEecCcce
Confidence 3567899999999999999987 22 1222 346677655433
No 284
>2rqx_A PMRD, polymyxin B resistance protein; signaling protein; NMR {Klebsiella pneumoniae}
Probab=20.06 E-value=2e+02 Score=19.13 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=27.5
Q ss_pred EEEEcCCcEEEeCCCCeeeeeeCCCCcEEEEEEe
Q 031374 117 RIWIKAGDLIVLPAGIYHRFTLDTSNYVKVMQIL 150 (160)
Q Consensus 117 ~~~v~~GDli~iP~g~~H~f~~~~~~~~~~ir~f 150 (160)
++.+++||++.==++..-.....+...+|.|+--
T Consensus 36 ~~~~k~GDlLsPL~dA~YCiNrn~~~tvKii~As 69 (89)
T 2rqx_A 36 RLRLREGDKLTPLADARYCLNNNPTQTLKIRNAT 69 (89)
T ss_dssp CCCCCTTCEEEECSSSCEEETTCTTSEEEEEEEE
T ss_pred ccccccccccccchhhhhhhcCCCCceEEEEecc
Confidence 4789999999877787777777788888888753
Done!