Query 031378
Match_columns 160
No_of_seqs 142 out of 695
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 21:18:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gn3_A Putative protein-disulf 99.7 1.1E-16 3.6E-21 123.8 10.5 115 19-141 47-181 (182)
2 4dvc_A Thiol:disulfide interch 99.6 1.3E-14 4.3E-19 109.0 10.2 77 70-148 108-184 (184)
3 3gmf_A Protein-disulfide isome 99.6 1.1E-14 3.7E-19 114.5 9.2 124 19-148 50-199 (205)
4 3gha_A Disulfide bond formatio 99.5 7.7E-14 2.6E-18 108.9 10.7 77 70-150 120-196 (202)
5 3bci_A Disulfide bond protein 99.5 2.1E-13 7.3E-18 103.7 11.3 108 29-148 61-180 (186)
6 3kzq_A Putative uncharacterize 99.5 5.9E-13 2E-17 103.3 12.0 114 30-149 89-206 (208)
7 3hd5_A Thiol:disulfide interch 99.5 2.4E-13 8.1E-18 104.0 9.5 115 29-150 71-188 (195)
8 3fz5_A Possible 2-hydroxychrom 99.4 5E-13 1.7E-17 103.8 10.7 104 30-142 91-198 (202)
9 3gl5_A Putative DSBA oxidoredu 99.4 4.2E-13 1.4E-17 107.4 10.5 110 30-148 101-215 (239)
10 2imf_A HCCA isomerase, 2-hydro 99.4 1.7E-13 5.9E-18 106.0 7.7 109 30-148 87-198 (203)
11 3h93_A Thiol:disulfide interch 99.4 2.1E-13 7.2E-18 104.1 7.8 110 30-149 72-187 (192)
12 3gyk_A 27KDA outer membrane pr 99.4 9.9E-13 3.4E-17 98.6 10.9 102 29-147 68-174 (175)
13 2in3_A Hypothetical protein; D 99.4 1.7E-12 5.7E-17 100.5 12.2 109 30-147 94-211 (216)
14 3hz8_A Thiol:disulfide interch 99.4 1.5E-12 5E-17 100.5 10.4 109 30-149 71-186 (193)
15 2rem_A Disulfide oxidoreductas 99.4 1.5E-12 5.3E-17 98.9 9.6 109 30-148 72-186 (193)
16 3l9s_A Thiol:disulfide interch 99.4 3.1E-12 1E-16 99.0 10.0 109 29-148 71-191 (191)
17 3l9v_A Putative thiol-disulfid 99.4 3.6E-12 1.2E-16 98.0 10.0 112 29-149 64-186 (189)
18 3f4s_A Alpha-DSBA1, putative u 99.4 1.5E-12 5.1E-17 103.6 7.8 109 32-148 88-213 (226)
19 2znm_A Thiol:disulfide interch 99.3 7.1E-12 2.4E-16 95.5 9.6 108 29-148 68-182 (195)
20 3c7m_A Thiol:disulfide interch 99.3 3.3E-12 1.1E-16 96.9 7.6 112 29-146 65-194 (195)
21 1r4w_A Glutathione S-transfera 99.3 2.1E-11 7.1E-16 95.9 10.7 108 30-145 97-214 (226)
22 3feu_A Putative lipoprotein; a 99.3 1.1E-11 3.9E-16 95.1 7.5 114 22-147 60-185 (185)
23 3rpp_A Glutathione S-transfera 99.1 5.3E-10 1.8E-14 88.9 11.8 107 31-146 98-215 (234)
24 1z6m_A Conserved hypothetical 98.8 5E-09 1.7E-13 78.3 5.5 60 70-142 115-174 (175)
25 1un2_A DSBA, thiol-disulfide i 98.7 3.3E-08 1.1E-12 76.8 8.5 55 71-127 9-63 (197)
26 3gv1_A Disulfide interchange p 98.3 2.5E-07 8.6E-12 68.9 3.7 50 96-148 91-141 (147)
27 1t3b_A Thiol:disulfide interch 98.0 3.8E-06 1.3E-10 65.3 3.4 44 98-144 165-209 (211)
28 1eej_A Thiol:disulfide interch 97.9 1E-05 3.4E-10 62.9 4.4 46 99-147 166-212 (216)
29 1v58_A Thiol:disulfide interch 97.7 2.9E-05 1E-09 61.4 3.7 51 93-146 178-233 (241)
30 1nho_A Probable thioredoxin; b 97.4 0.0001 3.5E-09 47.4 3.0 38 105-145 46-84 (85)
31 1fo5_A Thioredoxin; disulfide 97.3 0.00015 5.2E-09 46.6 3.5 38 105-145 47-85 (85)
32 3kp8_A Vkorc1/thioredoxin doma 97.0 0.00061 2.1E-08 47.2 4.3 35 105-142 57-91 (106)
33 2e0q_A Thioredoxin; electron t 96.9 0.00093 3.2E-08 43.9 3.9 42 105-146 60-103 (104)
34 2trx_A Thioredoxin; electron t 96.9 0.00085 2.9E-08 44.9 3.7 40 106-145 66-107 (108)
35 1thx_A Thioredoxin, thioredoxi 96.8 0.001 3.6E-08 44.8 3.8 43 105-147 70-114 (115)
36 1ilo_A Conserved hypothetical 96.8 0.0009 3.1E-08 42.3 3.0 35 105-141 41-76 (77)
37 1fb6_A Thioredoxin M; electron 96.8 0.00092 3.1E-08 44.3 3.2 41 105-145 63-105 (105)
38 1t00_A Thioredoxin, TRX; redox 96.8 0.00099 3.4E-08 45.0 3.3 42 105-146 68-111 (112)
39 3gnj_A Thioredoxin domain prot 96.7 0.0016 5.5E-08 43.6 4.0 42 105-146 67-110 (111)
40 1dby_A Chloroplast thioredoxin 96.7 0.00089 3E-08 44.7 2.5 41 105-145 64-106 (107)
41 3tco_A Thioredoxin (TRXA-1); d 96.6 0.0016 5.4E-08 43.3 3.6 41 105-145 66-108 (109)
42 2l57_A Uncharacterized protein 96.6 0.0021 7.2E-08 44.5 4.3 44 105-148 73-119 (126)
43 3p2a_A Thioredoxin 2, putative 96.6 0.0023 8E-08 45.7 4.6 44 105-148 100-145 (148)
44 1w4v_A Thioredoxin, mitochondr 96.6 0.0018 6E-08 44.7 3.8 41 105-145 76-118 (119)
45 2es7_A Q8ZP25_salty, putative 96.6 0.0024 8.3E-08 46.5 4.8 45 104-148 81-127 (142)
46 2i4a_A Thioredoxin; acidophIle 96.6 0.0015 5E-08 43.4 3.3 40 105-144 65-106 (107)
47 1ep7_A Thioredoxin CH1, H-type 96.6 0.0014 4.8E-08 44.1 3.1 41 105-146 69-111 (112)
48 1v98_A Thioredoxin; oxidoreduc 96.6 0.002 6.9E-08 45.6 4.0 43 105-147 95-139 (140)
49 1nsw_A Thioredoxin, TRX; therm 96.6 0.00092 3.1E-08 44.5 2.0 41 105-145 62-104 (105)
50 2yzu_A Thioredoxin; redox prot 96.5 0.0014 4.8E-08 43.5 2.8 43 105-147 63-107 (109)
51 3die_A Thioredoxin, TRX; elect 96.5 0.0014 4.9E-08 43.4 2.8 39 106-144 65-105 (106)
52 3emx_A Thioredoxin; structural 96.5 0.0024 8.3E-08 45.2 4.2 49 102-150 80-130 (135)
53 1r26_A Thioredoxin; redox-acti 96.5 0.0023 8E-08 45.0 3.9 42 105-147 81-124 (125)
54 1xwb_A Thioredoxin; dimerizati 96.4 0.0021 7.3E-08 42.5 3.2 40 105-145 65-106 (106)
55 3hz4_A Thioredoxin; NYSGXRC, P 96.4 0.0022 7.5E-08 45.6 3.3 44 105-148 69-114 (140)
56 3m9j_A Thioredoxin; oxidoreduc 96.4 0.0026 9.1E-08 42.1 3.5 40 105-145 64-105 (105)
57 2voc_A Thioredoxin; electron t 96.4 0.0021 7.1E-08 43.8 3.0 43 106-148 63-107 (112)
58 2vlu_A Thioredoxin, thioredoxi 96.4 0.0027 9.4E-08 43.5 3.6 42 105-147 78-121 (122)
59 2o8v_B Thioredoxin 1; disulfid 96.4 0.0023 7.7E-08 45.1 3.2 41 105-145 85-127 (128)
60 2vim_A Thioredoxin, TRX; thior 96.3 0.0035 1.2E-07 41.3 3.5 39 106-145 64-104 (104)
61 2i1u_A Thioredoxin, TRX, MPT46 96.2 0.0012 4.1E-08 45.1 1.2 42 105-146 75-118 (121)
62 2f9s_A Thiol-disulfide oxidore 96.2 0.0031 1.1E-07 44.7 3.4 49 106-154 95-146 (151)
63 1syr_A Thioredoxin; SGPP, stru 96.2 0.0024 8.1E-08 43.4 2.7 40 105-145 70-111 (112)
64 2xc2_A Thioredoxinn; oxidoredu 96.2 0.0035 1.2E-07 42.8 3.5 40 105-145 76-117 (117)
65 3dml_A Putative uncharacterize 96.2 0.0038 1.3E-07 44.6 3.6 43 106-148 68-112 (116)
66 3zzx_A Thioredoxin; oxidoreduc 96.2 0.0039 1.3E-07 42.9 3.6 38 105-143 64-103 (105)
67 2ppt_A Thioredoxin-2; thiredox 96.2 0.004 1.4E-07 45.4 3.8 43 105-147 109-153 (155)
68 2lja_A Putative thiol-disulfid 96.2 0.0072 2.5E-07 42.6 5.1 46 105-150 99-147 (152)
69 2qgv_A Hydrogenase-1 operon pr 96.1 0.0049 1.7E-07 45.5 4.1 46 103-148 80-127 (140)
70 3uvt_A Thioredoxin domain-cont 96.1 0.0063 2.1E-07 40.5 4.3 39 106-144 70-110 (111)
71 1xfl_A Thioredoxin H1; AT3G510 96.1 0.0039 1.3E-07 43.5 3.4 40 105-145 82-123 (124)
72 2l5o_A Putative thioredoxin; s 96.1 0.0038 1.3E-07 44.2 3.3 48 106-153 98-148 (153)
73 2vm1_A Thioredoxin, thioredoxi 96.1 0.0049 1.7E-07 41.6 3.7 42 105-147 72-115 (118)
74 2dj1_A Protein disulfide-isome 96.1 0.01 3.5E-07 41.5 5.5 44 105-149 82-127 (140)
75 4euy_A Uncharacterized protein 96.1 0.0024 8.3E-08 42.8 2.1 41 105-145 62-104 (105)
76 3d6i_A Monothiol glutaredoxin- 96.1 0.0073 2.5E-07 40.6 4.5 42 105-147 67-110 (112)
77 1x5d_A Protein disulfide-isome 96.1 0.0077 2.6E-07 41.6 4.7 44 105-148 74-119 (133)
78 3qfa_C Thioredoxin; protein-pr 96.1 0.0037 1.2E-07 43.0 2.9 40 105-145 75-116 (116)
79 1oaz_A Thioredoxin 1; immune s 96.0 0.0019 6.6E-08 45.2 1.4 41 105-145 80-122 (123)
80 2b5x_A YKUV protein, TRXY; thi 96.0 0.0049 1.7E-07 42.9 3.6 43 106-148 102-147 (148)
81 2j23_A Thioredoxin; immune pro 96.0 0.0038 1.3E-07 43.2 2.9 39 106-145 80-120 (121)
82 2kuc_A Putative disulphide-iso 96.0 0.0057 1.9E-07 42.3 3.8 45 105-149 77-124 (130)
83 2l6c_A Thioredoxin; oxidoreduc 96.0 0.003 1E-07 42.9 2.2 41 106-146 64-106 (110)
84 2ju5_A Thioredoxin disulfide i 96.0 0.0087 3E-07 43.4 4.8 44 103-147 105-153 (154)
85 1zma_A Bacterocin transport ac 96.0 0.0086 2.9E-07 40.9 4.5 38 105-142 78-117 (118)
86 1ti3_A Thioredoxin H, PTTRXH1; 95.9 0.0033 1.1E-07 42.2 2.2 40 106-146 71-112 (113)
87 3eyt_A Uncharacterized protein 95.9 0.0075 2.6E-07 42.9 4.2 43 106-148 109-154 (158)
88 2yj7_A LPBCA thioredoxin; oxid 94.9 0.0013 4.3E-08 43.4 0.0 41 105-145 64-106 (106)
89 1mek_A Protein disulfide isome 95.9 0.0025 8.6E-08 42.9 1.5 42 105-146 72-117 (120)
90 2hls_A Protein disulfide oxido 95.9 0.0093 3.2E-07 46.8 4.9 42 106-150 188-230 (243)
91 1ego_A Glutaredoxin; electron 95.9 0.0096 3.3E-07 38.2 4.2 33 107-145 49-83 (85)
92 3f3q_A Thioredoxin-1; His TAG, 95.9 0.0064 2.2E-07 41.2 3.5 40 105-145 68-109 (109)
93 1zzo_A RV1677; thioredoxin fol 95.9 0.0058 2E-07 41.8 3.2 40 106-146 93-135 (136)
94 3d22_A TRXH4, thioredoxin H-ty 95.8 0.0077 2.6E-07 42.3 3.8 43 105-148 90-134 (139)
95 1faa_A Thioredoxin F; electron 95.8 0.0053 1.8E-07 42.2 2.9 40 105-145 82-123 (124)
96 3ul3_B Thioredoxin, thioredoxi 95.7 0.0074 2.5E-07 42.0 3.3 39 105-143 87-127 (128)
97 3cxg_A Putative thioredoxin; m 95.7 0.0071 2.4E-07 42.7 3.3 42 106-148 84-131 (133)
98 3hxs_A Thioredoxin, TRXP; elec 95.7 0.0053 1.8E-07 43.1 2.5 42 105-147 96-140 (141)
99 3lor_A Thiol-disulfide isomera 95.7 0.0086 2.9E-07 42.6 3.6 43 106-148 112-157 (160)
100 1x5e_A Thioredoxin domain cont 95.6 0.012 4E-07 40.6 4.1 42 106-148 69-112 (126)
101 2pu9_C TRX-F, thioredoxin F-ty 95.6 0.0063 2.2E-07 40.9 2.5 40 105-145 69-110 (111)
102 3ktb_A Arsenical resistance op 95.6 0.036 1.2E-06 39.1 6.3 69 70-142 34-102 (106)
103 2ywm_A Glutaredoxin-like prote 95.5 0.0092 3.1E-07 45.5 3.4 41 105-148 180-222 (229)
104 2lst_A Thioredoxin; structural 94.5 0.0023 8E-08 44.4 0.0 47 104-150 68-120 (130)
105 3kp9_A Vkorc1/thioredoxin doma 95.4 0.011 3.6E-07 48.6 3.7 36 104-142 241-276 (291)
106 2l5l_A Thioredoxin; structural 95.4 0.01 3.6E-07 41.7 3.2 44 105-149 83-129 (136)
107 3ia1_A THIO-disulfide isomeras 95.4 0.013 4.5E-07 41.4 3.6 46 105-150 100-148 (154)
108 3msz_A Glutaredoxin 1; alpha-b 95.3 0.018 6.3E-07 37.1 4.1 32 111-148 58-89 (89)
109 2qsi_A Putative hydrogenase ex 95.3 0.01 3.5E-07 43.6 3.0 44 104-147 79-124 (137)
110 3gix_A Thioredoxin-like protei 95.3 0.018 6E-07 41.7 4.3 43 106-148 69-123 (149)
111 1gh2_A Thioredoxin-like protei 95.3 0.017 5.7E-07 38.5 3.7 39 106-145 66-106 (107)
112 3f9u_A Putative exported cytoc 95.3 0.01 3.4E-07 43.3 2.8 42 107-148 123-168 (172)
113 2fwh_A Thiol:disulfide interch 95.2 0.02 6.9E-07 40.2 4.2 41 104-144 81-126 (134)
114 2e7p_A Glutaredoxin; thioredox 95.2 0.0023 8E-08 43.7 -0.8 39 106-144 65-106 (116)
115 2wz9_A Glutaredoxin-3; protein 95.2 0.016 5.6E-07 41.7 3.8 45 105-150 76-122 (153)
116 1wmj_A Thioredoxin H-type; str 95.1 0.0054 1.8E-07 42.2 0.9 42 106-148 81-124 (130)
117 3raz_A Thioredoxin-related pro 95.1 0.024 8.3E-07 40.1 4.4 45 106-150 95-144 (151)
118 2h30_A Thioredoxin, peptide me 95.1 0.009 3.1E-07 42.6 2.0 43 106-148 113-158 (164)
119 1kng_A Thiol:disulfide interch 95.0 0.016 5.4E-07 40.9 3.2 43 106-148 109-154 (156)
120 3kgk_A Arsenical resistance op 95.0 0.035 1.2E-06 39.4 4.9 68 71-142 32-99 (110)
121 3apq_A DNAJ homolog subfamily 95.0 0.02 6.8E-07 43.4 3.9 44 105-148 159-204 (210)
122 2lrn_A Thiol:disulfide interch 94.9 0.048 1.6E-06 38.6 5.4 43 105-150 100-145 (152)
123 1lu4_A Soluble secreted antige 94.8 0.021 7.2E-07 39.1 3.4 39 106-145 91-135 (136)
124 1r7h_A NRDH-redoxin; thioredox 94.8 0.019 6.4E-07 35.8 2.8 31 108-142 44-74 (75)
125 3or5_A Thiol:disulfide interch 94.8 0.021 7.3E-07 40.6 3.4 43 108-150 110-155 (165)
126 2oe3_A Thioredoxin-3; electron 94.8 0.016 5.5E-07 39.7 2.6 38 105-143 74-113 (114)
127 4evm_A Thioredoxin family prot 94.6 0.021 7.2E-07 38.7 2.9 39 106-144 96-137 (138)
128 1a8l_A Protein disulfide oxido 94.6 0.028 9.5E-07 42.5 3.8 40 106-145 184-225 (226)
129 3idv_A Protein disulfide-isome 94.6 0.074 2.5E-06 40.2 6.2 44 105-149 80-125 (241)
130 3ha9_A Uncharacterized thiored 94.5 0.02 6.7E-07 41.1 2.7 40 105-146 121-164 (165)
131 3idv_A Protein disulfide-isome 94.5 0.051 1.8E-06 41.2 5.1 42 105-147 195-238 (241)
132 2dml_A Protein disulfide-isome 94.5 0.029 9.8E-07 38.6 3.3 44 105-148 80-126 (130)
133 1h75_A Glutaredoxin-like prote 94.4 0.0088 3E-07 38.2 0.5 33 109-145 45-77 (81)
134 1qgv_A Spliceosomal protein U5 94.4 0.065 2.2E-06 38.3 5.2 44 106-149 69-124 (142)
135 3fkf_A Thiol-disulfide oxidore 94.3 0.04 1.4E-06 38.2 3.9 40 105-147 105-147 (148)
136 3hcz_A Possible thiol-disulfid 94.3 0.031 1.1E-06 38.8 3.3 37 106-145 103-142 (148)
137 3dxb_A Thioredoxin N-terminall 94.3 0.027 9.4E-07 43.1 3.1 44 106-149 76-121 (222)
138 3ic4_A Glutaredoxin (GRX-1); s 94.2 0.035 1.2E-06 36.3 3.2 33 106-142 59-91 (92)
139 3ewl_A Uncharacterized conserv 94.1 0.04 1.4E-06 38.3 3.4 36 107-145 102-140 (142)
140 3fk8_A Disulphide isomerase; A 94.0 0.06 2E-06 37.2 4.3 41 105-145 79-132 (133)
141 3erw_A Sporulation thiol-disul 94.0 0.027 9.2E-07 38.9 2.4 37 106-142 106-145 (145)
142 2b1k_A Thiol:disulfide interch 94.0 0.023 8E-07 40.8 2.1 42 106-147 117-161 (168)
143 3h79_A Thioredoxin-like protei 93.8 0.053 1.8E-06 37.3 3.7 40 105-144 83-126 (127)
144 1fov_A Glutaredoxin 3, GRX3; a 93.8 0.053 1.8E-06 34.3 3.3 30 107-142 44-73 (82)
145 3aps_A DNAJ homolog subfamily 93.7 0.016 5.4E-07 39.5 0.7 44 105-148 66-115 (122)
146 3ph9_A Anterior gradient prote 93.7 0.084 2.9E-06 38.8 4.7 42 107-148 93-144 (151)
147 3fw2_A Thiol-disulfide oxidore 93.5 0.088 3E-06 37.0 4.4 40 105-147 107-149 (150)
148 2dj3_A Protein disulfide-isome 93.4 0.047 1.6E-06 37.6 2.7 42 107-148 74-120 (133)
149 1wjk_A C330018D20RIK protein; 93.3 0.037 1.3E-06 37.5 2.1 38 106-146 59-96 (100)
150 1ttz_A Conserved hypothetical 93.3 0.036 1.2E-06 37.0 1.9 39 107-149 41-80 (87)
151 3qou_A Protein YBBN; thioredox 93.3 0.068 2.3E-06 42.0 3.8 41 105-145 71-113 (287)
152 3gl3_A Putative thiol:disulfid 93.3 0.062 2.1E-06 37.6 3.3 43 106-148 97-144 (152)
153 2ywi_A Hypothetical conserved 93.2 0.07 2.4E-06 39.2 3.6 43 107-149 123-177 (196)
154 3kcm_A Thioredoxin family prot 93.2 0.029 1E-06 39.5 1.4 45 106-151 98-148 (154)
155 2k8s_A Thioredoxin; dimer, str 93.1 0.041 1.4E-06 35.2 1.9 20 106-125 47-66 (80)
156 3kh7_A Thiol:disulfide interch 93.0 0.053 1.8E-06 39.8 2.7 42 107-148 125-169 (176)
157 2av4_A Thioredoxin-like protei 92.9 0.12 4.1E-06 38.9 4.5 44 106-149 87-142 (160)
158 2klx_A Glutaredoxin; thioredox 92.8 0.1 3.6E-06 33.8 3.7 30 107-142 47-77 (89)
159 1kte_A Thioltransferase; redox 92.6 0.12 4.2E-06 34.4 3.8 21 107-127 61-81 (105)
160 2ht9_A Glutaredoxin-2; thiored 92.5 0.04 1.4E-06 40.3 1.3 22 106-127 94-115 (146)
161 2dbc_A PDCL2, unnamed protein 92.3 0.085 2.9E-06 37.2 2.8 38 108-145 74-120 (135)
162 2djj_A PDI, protein disulfide- 92.2 0.1 3.4E-06 35.2 3.1 37 111-147 78-118 (121)
163 3c1r_A Glutaredoxin-1; oxidize 92.1 0.15 5E-06 35.5 3.8 30 107-142 75-104 (118)
164 2hze_A Glutaredoxin-1; thiored 91.9 0.12 4.2E-06 35.4 3.3 21 107-127 68-88 (114)
165 2dlx_A UBX domain-containing p 91.8 0.34 1.2E-05 35.6 5.8 48 104-152 91-142 (153)
166 2r2j_A Thioredoxin domain-cont 91.5 0.2 6.8E-06 41.4 4.6 43 105-147 73-118 (382)
167 3eur_A Uncharacterized protein 91.5 0.1 3.4E-06 36.4 2.4 35 105-142 104-141 (142)
168 2djk_A PDI, protein disulfide- 91.5 0.2 7E-06 35.0 4.1 45 106-150 68-119 (133)
169 2ggt_A SCO1 protein homolog, m 90.9 0.28 9.7E-06 34.5 4.4 43 105-147 102-162 (164)
170 3f8u_A Protein disulfide-isome 90.8 0.23 8E-06 41.9 4.5 43 105-147 66-110 (481)
171 2cvb_A Probable thiol-disulfid 90.8 0.14 4.9E-06 37.4 2.8 43 106-148 108-161 (188)
172 2yan_A Glutaredoxin-3; oxidore 90.7 0.2 6.9E-06 33.8 3.3 29 108-142 66-94 (105)
173 3qmx_A Glutaredoxin A, glutare 90.7 0.26 8.8E-06 33.3 3.8 26 111-142 64-89 (99)
174 3nzn_A Glutaredoxin; structura 90.7 0.37 1.3E-05 32.3 4.6 31 108-142 71-102 (103)
175 3u5r_E Uncharacterized protein 90.6 0.25 8.4E-06 37.6 4.1 43 106-148 135-189 (218)
176 1a8l_A Protein disulfide oxido 90.3 0.37 1.3E-05 36.1 4.9 40 104-146 68-113 (226)
177 2f51_A Thioredoxin; electron t 90.2 0.16 5.3E-06 34.7 2.4 40 105-145 67-112 (118)
178 3evi_A Phosducin-like protein 90.2 0.39 1.3E-05 33.5 4.5 37 107-143 66-111 (118)
179 3cmi_A Peroxiredoxin HYR1; thi 90.1 0.22 7.7E-06 35.9 3.3 41 107-147 120-169 (171)
180 2cq9_A GLRX2 protein, glutared 90.0 0.24 8.2E-06 34.9 3.3 22 106-127 72-93 (130)
181 1wou_A Thioredoxin -related pr 90.0 0.13 4.3E-06 35.4 1.8 37 106-143 84-122 (123)
182 3rhb_A ATGRXC5, glutaredoxin-C 89.9 0.32 1.1E-05 33.0 3.8 29 108-142 67-95 (113)
183 2khp_A Glutaredoxin; thioredox 89.6 0.25 8.4E-06 32.0 2.9 29 107-141 49-77 (92)
184 2lrt_A Uncharacterized protein 89.6 0.23 7.8E-06 35.3 2.9 40 106-148 105-147 (152)
185 3us3_A Calsequestrin-1; calciu 89.5 0.32 1.1E-05 40.1 4.2 41 105-146 82-124 (367)
186 2hyx_A Protein DIPZ; thioredox 89.4 0.31 1.1E-05 40.6 4.0 44 106-149 156-202 (352)
187 2axo_A Hypothetical protein AT 89.3 0.46 1.6E-05 38.5 4.9 42 103-147 101-144 (270)
188 4fo5_A Thioredoxin-like protei 89.0 0.25 8.5E-06 34.3 2.7 35 106-143 105-142 (143)
189 2vup_A Glutathione peroxidase- 88.6 0.43 1.5E-05 35.1 4.0 42 107-148 137-187 (190)
190 2rli_A SCO2 protein homolog, m 88.5 0.52 1.8E-05 33.5 4.2 45 105-149 105-167 (171)
191 3lwa_A Secreted thiol-disulfid 88.1 0.43 1.5E-05 34.6 3.6 38 110-147 142-182 (183)
192 2b5e_A Protein disulfide-isome 88.0 0.36 1.2E-05 41.1 3.6 42 105-146 77-122 (504)
193 2ywm_A Glutaredoxin-like prote 87.6 0.75 2.6E-05 34.6 4.9 40 104-146 71-115 (229)
194 2lqo_A Putative glutaredoxin R 87.1 1.2 4.2E-05 29.8 5.2 37 108-148 49-86 (92)
195 3ctg_A Glutaredoxin-2; reduced 86.9 0.5 1.7E-05 33.4 3.3 30 107-142 87-116 (129)
196 3q6o_A Sulfhydryl oxidase 1; p 86.6 1.2 4.1E-05 34.0 5.6 43 105-149 80-130 (244)
197 3h8q_A Thioredoxin reductase 3 85.9 0.78 2.7E-05 31.4 3.8 29 108-142 64-92 (114)
198 1sji_A Calsequestrin 2, calseq 85.5 0.39 1.3E-05 39.0 2.3 41 105-146 80-122 (350)
199 2fgx_A Putative thioredoxin; N 85.1 0.38 1.3E-05 33.4 1.8 32 107-141 73-106 (107)
200 2trc_P Phosducin, MEKA, PP33; 85.0 0.44 1.5E-05 36.7 2.3 38 106-143 164-210 (217)
201 3ed3_A Protein disulfide-isome 84.4 0.71 2.4E-05 37.0 3.4 42 104-145 81-141 (298)
202 1hyu_A AHPF, alkyl hydroperoxi 83.7 0.83 2.8E-05 39.4 3.7 38 105-144 161-198 (521)
203 2v1m_A Glutathione peroxidase; 83.5 0.67 2.3E-05 32.7 2.6 37 112-148 130-169 (169)
204 1sen_A Thioredoxin-like protei 83.1 1.3 4.4E-05 32.0 4.1 42 107-148 94-150 (164)
205 2qc7_A ERP31, ERP28, endoplasm 82.9 1 3.5E-05 35.4 3.7 41 105-145 72-118 (240)
206 3ira_A Conserved protein; meth 82.8 0.69 2.3E-05 34.7 2.5 36 110-145 100-143 (173)
207 1t1v_A SH3BGRL3, SH3 domain-bi 81.9 1.3 4.4E-05 29.0 3.4 25 112-142 58-82 (93)
208 1wik_A Thioredoxin-like protei 81.8 0.99 3.4E-05 30.5 2.8 27 110-142 66-92 (109)
209 1we0_A Alkyl hydroperoxide red 81.7 1 3.5E-05 32.8 3.1 44 106-149 104-160 (187)
210 3tdg_A DSBG, putative uncharac 81.2 1.3 4.3E-05 36.0 3.7 28 94-121 235-263 (273)
211 3t58_A Sulfhydryl oxidase 1; o 81.1 1.9 6.4E-05 37.6 5.0 45 105-149 80-130 (519)
212 3ipz_A Monothiol glutaredoxin- 80.4 1.9 6.4E-05 29.3 3.9 26 111-142 70-95 (109)
213 2dj0_A Thioredoxin-related tra 79.1 0.11 3.7E-06 36.3 -3.0 36 106-141 73-116 (137)
214 1a0r_P Phosducin, MEKA, PP33; 79.0 1.3 4.4E-05 35.0 3.0 39 106-144 177-224 (245)
215 3f8u_A Protein disulfide-isome 78.7 1.4 4.8E-05 37.0 3.3 42 107-148 418-463 (481)
216 1xzo_A BSSCO, hypothetical pro 78.5 1.7 5.7E-05 30.8 3.3 37 110-147 131-173 (174)
217 1zof_A Alkyl hydroperoxide-red 78.2 1.8 6.1E-05 31.9 3.5 43 106-148 109-163 (198)
218 1aba_A Glutaredoxin; electron 77.9 1.3 4.6E-05 28.4 2.4 21 114-140 64-85 (87)
219 3iv4_A Putative oxidoreductase 77.8 0.83 2.8E-05 32.2 1.4 37 105-141 71-111 (112)
220 2hls_A Protein disulfide oxido 77.4 3.3 0.00011 32.0 4.9 40 105-147 77-118 (243)
221 2ls5_A Uncharacterized protein 78.9 0.47 1.6E-05 33.4 0.0 44 106-150 104-152 (159)
222 2k6v_A Putative cytochrome C o 76.6 0.54 1.9E-05 33.3 0.1 37 108-144 131-171 (172)
223 1jfu_A Thiol:disulfide interch 76.6 1.1 3.7E-05 32.4 1.8 38 110-148 139-182 (186)
224 3drn_A Peroxiredoxin, bacterio 76.4 2.4 8E-05 30.0 3.6 40 105-144 97-147 (161)
225 3gkn_A Bacterioferritin comigr 75.9 2.7 9.2E-05 29.5 3.8 39 106-144 104-160 (163)
226 2b5e_A Protein disulfide-isome 75.8 1.8 6.1E-05 36.7 3.2 37 110-146 427-467 (504)
227 3gx8_A Monothiol glutaredoxin- 75.5 3 0.0001 29.0 3.9 26 110-141 70-95 (121)
228 3apo_A DNAJ homolog subfamily 75.4 0.89 3E-05 40.8 1.3 40 106-145 179-220 (780)
229 2f8a_A Glutathione peroxidase 75.2 1.6 5.6E-05 32.9 2.5 36 111-146 169-207 (208)
230 2wci_A Glutaredoxin-4; redox-a 74.8 3 0.0001 29.8 3.8 17 111-127 87-103 (135)
231 3zyw_A Glutaredoxin-3; metal b 74.4 2.8 9.7E-05 28.6 3.4 26 111-142 68-93 (111)
232 2p5q_A Glutathione peroxidase 74.0 1.6 5.5E-05 30.7 2.1 38 110-147 124-169 (170)
233 2ct6_A SH3 domain-binding glut 73.9 2.1 7.1E-05 29.2 2.6 26 111-142 69-94 (111)
234 3hdc_A Thioredoxin family prot 73.8 1.8 6.1E-05 30.4 2.3 21 106-126 107-130 (158)
235 3apo_A DNAJ homolog subfamily 73.8 0.87 3E-05 40.9 0.7 43 106-148 721-769 (780)
236 3l4n_A Monothiol glutaredoxin- 73.6 2.8 9.6E-05 29.6 3.3 26 110-141 66-91 (127)
237 2bmx_A Alkyl hydroperoxidase C 71.2 2.5 8.4E-05 31.0 2.6 40 107-146 119-170 (195)
238 2wem_A Glutaredoxin-related pr 70.6 4.7 0.00016 28.0 3.9 25 111-141 73-97 (118)
239 3dwv_A Glutathione peroxidase- 69.1 3.5 0.00012 30.0 3.1 41 108-148 139-185 (187)
240 3q6o_A Sulfhydryl oxidase 1; p 69.1 3.6 0.00012 31.3 3.2 39 104-142 195-236 (244)
241 3uem_A Protein disulfide-isome 68.6 2.4 8.2E-05 34.1 2.2 38 107-144 314-355 (361)
242 2r2c_A 28 kDa outer membrane p 67.8 0.22 7.6E-06 37.8 -3.9 44 104-147 6-51 (183)
243 1nm3_A Protein HI0572; hybrid, 67.4 3.8 0.00013 31.1 3.1 28 108-141 213-240 (241)
244 3s9f_A Tryparedoxin; thioredox 67.3 2.9 9.9E-05 29.9 2.2 23 104-126 118-144 (165)
245 1zye_A Thioredoxin-dependent p 63.5 12 0.00042 28.0 5.3 41 106-146 132-185 (220)
246 1u6t_A SH3 domain-binding glut 63.2 8.1 0.00028 27.3 3.9 30 111-146 61-95 (121)
247 2p31_A CL683, glutathione pero 63.2 2.1 7.2E-05 31.0 0.8 35 111-145 136-180 (181)
248 2c0g_A ERP29 homolog, windbeut 62.2 6.4 0.00022 31.0 3.5 41 105-146 84-132 (248)
249 2lus_A Thioredoxion; CR-Trp16, 65.4 1.7 5.9E-05 29.5 0.0 22 105-126 99-123 (143)
250 3ga4_A Dolichyl-diphosphooligo 60.9 10 0.00034 28.5 4.2 44 104-147 93-154 (178)
251 1xvw_A Hypothetical protein RV 59.0 6.2 0.00021 27.4 2.7 37 107-143 108-157 (160)
252 2b7k_A SCO1 protein; metalloch 58.4 11 0.00037 27.7 4.1 33 115-147 145-180 (200)
253 1o73_A Tryparedoxin; electron 57.9 5.4 0.00019 27.0 2.2 22 105-126 99-124 (144)
254 2obi_A PHGPX, GPX-4, phospholi 57.5 2.5 8.4E-05 30.6 0.3 33 112-144 147-182 (183)
255 2h01_A 2-Cys peroxiredoxin; th 56.9 6.8 0.00023 28.4 2.7 41 106-146 107-159 (192)
256 2i81_A 2-Cys peroxiredoxin; st 56.5 7.7 0.00026 29.1 3.0 41 106-146 128-180 (213)
257 3uem_A Protein disulfide-isome 54.9 21 0.0007 28.4 5.5 45 106-150 183-234 (361)
258 1uul_A Tryparedoxin peroxidase 52.6 6.3 0.00022 29.0 1.9 40 107-146 113-165 (202)
259 2a4v_A Peroxiredoxin DOT5; yea 52.2 9.8 0.00034 26.5 2.8 21 106-126 103-131 (159)
260 3ixr_A Bacterioferritin comigr 51.6 16 0.00056 26.2 4.0 38 107-144 121-176 (179)
261 4f9z_D Endoplasmic reticulum r 51.4 21 0.00072 26.7 4.8 41 108-148 181-227 (227)
262 2gs3_A PHGPX, GPX-4, phospholi 50.7 4.9 0.00017 29.1 1.0 32 114-145 151-185 (185)
263 2jsy_A Probable thiol peroxida 50.4 15 0.0005 25.7 3.5 39 107-145 114-166 (167)
264 2r37_A Glutathione peroxidase 49.9 15 0.0005 27.6 3.6 33 116-148 160-195 (207)
265 1xvq_A Thiol peroxidase; thior 49.4 11 0.00036 27.0 2.6 45 106-150 111-169 (175)
266 1o8x_A Tryparedoxin, TRYX, TXN 49.0 9.7 0.00033 25.9 2.3 23 104-126 98-124 (146)
267 3bj5_A Protein disulfide-isome 48.2 59 0.002 22.8 6.6 44 107-150 81-131 (147)
268 2wul_A Glutaredoxin related pr 48.2 21 0.00071 24.9 3.9 26 111-142 73-98 (118)
269 1qmv_A Human thioredoxin perox 47.0 13 0.00045 27.0 2.9 40 106-145 110-162 (197)
270 1i5g_A Tryparedoxin II; electr 46.8 11 0.00038 25.5 2.3 22 105-126 99-124 (144)
271 2jad_A Yellow fluorescent prot 46.3 31 0.0011 28.8 5.3 25 110-140 314-338 (362)
272 3qcp_A QSOX from trypanosoma b 45.0 23 0.0008 30.5 4.5 44 105-148 95-154 (470)
273 4g2e_A Peroxiredoxin; redox pr 44.2 32 0.0011 24.0 4.6 31 114-144 118-156 (157)
274 3c6f_A YETF protein; uncharact 43.6 11 0.00037 27.7 1.9 33 111-143 11-46 (153)
275 3kij_A Probable glutathione pe 43.6 13 0.00045 26.5 2.4 34 113-146 130-170 (180)
276 4gqc_A Thiol peroxidase, perox 43.5 44 0.0015 23.6 5.3 42 106-147 102-161 (164)
277 3p7x_A Probable thiol peroxida 43.4 16 0.00055 25.7 2.8 20 107-126 115-143 (166)
278 3me7_A Putative uncharacterize 43.2 27 0.00091 24.8 4.0 39 110-148 122-164 (170)
279 1n8j_A AHPC, alkyl hydroperoxi 40.9 21 0.00072 25.8 3.2 40 107-146 104-156 (186)
280 2c0d_A Thioredoxin peroxidase 39.6 22 0.00074 26.9 3.2 41 106-146 132-184 (221)
281 3ztl_A Thioredoxin peroxidase; 36.9 57 0.002 24.2 5.2 40 106-145 145-197 (222)
282 3qpm_A Peroxiredoxin; oxidored 36.7 45 0.0016 25.4 4.6 40 106-145 153-205 (240)
283 2i3y_A Epididymal secretory gl 36.6 31 0.0011 26.0 3.6 33 116-148 178-213 (215)
284 2pn8_A Peroxiredoxin-4; thiore 35.8 52 0.0018 24.3 4.8 41 106-146 124-177 (211)
285 3cpr_A Dihydrodipicolinate syn 35.6 69 0.0024 25.5 5.7 51 99-156 38-88 (304)
286 2ec4_A FAS-associated factor 1 35.4 40 0.0014 24.9 4.0 38 108-148 124-170 (178)
287 3a2v_A Probable peroxiredoxin; 34.9 22 0.00074 27.8 2.5 36 111-146 120-162 (249)
288 3a5f_A Dihydrodipicolinate syn 30.2 68 0.0023 25.3 4.8 45 99-148 23-67 (291)
289 1f6k_A N-acetylneuraminate lya 29.4 66 0.0023 25.4 4.6 51 99-156 25-76 (293)
290 2ehh_A DHDPS, dihydrodipicolin 29.2 77 0.0026 25.0 5.0 45 99-148 22-66 (294)
291 1xky_A Dihydrodipicolinate syn 29.0 78 0.0027 25.1 5.0 51 99-156 34-84 (301)
292 2yxg_A DHDPS, dihydrodipicolin 29.0 74 0.0025 25.1 4.8 45 99-148 22-66 (289)
293 3b4u_A Dihydrodipicolinate syn 28.0 81 0.0028 24.9 4.9 45 99-148 25-69 (294)
294 3keb_A Probable thiol peroxida 27.9 81 0.0028 24.2 4.7 32 115-146 137-176 (224)
295 2rfg_A Dihydrodipicolinate syn 27.9 71 0.0024 25.4 4.5 50 100-156 23-72 (297)
296 2wkj_A N-acetylneuraminate lya 27.4 80 0.0027 25.1 4.8 45 99-148 33-77 (303)
297 2ojp_A DHDPS, dihydrodipicolin 27.1 72 0.0025 25.2 4.4 44 100-148 24-67 (292)
298 1o5k_A DHDPS, dihydrodipicolin 26.6 83 0.0029 25.0 4.7 51 99-156 34-84 (306)
299 1z6n_A Hypothetical protein PA 26.5 49 0.0017 23.9 3.1 31 111-145 107-142 (167)
300 2v9d_A YAGE; dihydrodipicolini 26.5 91 0.0031 25.4 5.0 51 99-156 53-103 (343)
301 2vc6_A MOSA, dihydrodipicolina 25.5 73 0.0025 25.1 4.2 45 99-148 22-66 (292)
302 3uma_A Hypothetical peroxiredo 23.3 76 0.0026 23.1 3.6 27 117-143 152-183 (184)
303 4aw7_A GH86A beta-porphyranase 23.0 36 0.0012 30.4 2.0 22 106-127 511-532 (591)
304 2yzh_A Probable thiol peroxida 22.4 57 0.002 22.7 2.7 31 115-145 133-171 (171)
305 3l21_A DHDPS, dihydrodipicolin 22.1 1.2E+02 0.0039 24.2 4.8 45 99-148 37-81 (304)
306 2r8w_A AGR_C_1641P; APC7498, d 21.9 93 0.0032 25.2 4.2 51 99-156 56-106 (332)
307 3tak_A DHDPS, dihydrodipicolin 21.5 1.1E+02 0.0036 24.1 4.4 44 100-148 24-67 (291)
308 3flu_A DHDPS, dihydrodipicolin 21.4 1.3E+02 0.0046 23.7 5.0 50 100-156 30-79 (297)
309 3us3_A Calsequestrin-1; calciu 20.5 1.5E+02 0.0051 23.7 5.2 44 109-152 302-354 (367)
No 1
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=99.69 E-value=1.1e-16 Score=123.79 Aligned_cols=115 Identities=18% Similarity=0.390 Sum_probs=90.8
Q ss_pred eeeeeccCc---h---hhhHHHHHHHHHhhh--h-----HHHHh--chhhh-hcC----CCCCCChHHHHHHHHHHHHhh
Q 031378 19 KLASYFRDK---F---VCFFLVVLYIKRRLN--C-----LLEIV--QQEKF-YNA----PTQNMTRTAVVKEIVKFAAEG 78 (160)
Q Consensus 19 ~~~~~~~~~---~---~~~a~ra~~aar~~~--~-----~l~~~--~Q~~f-~~~----~~~~~t~~~i~~~la~~A~~~ 78 (160)
+|.+++|.- + +..++|+..++++++ + +.+.+ +|+.| +.. +..++++.+++..+++.+
T Consensus 47 ~v~~v~r~~p~~~h~~s~~aaraa~aa~~~~~~~~~f~~~~~aLf~~q~~~~~~~~~~~~~~~~~~~~~l~~~a~~~--- 123 (182)
T 3gn3_A 47 NVTVRIRLQSQPWHMFSGVIVRCILAAATLEGGKESAKAVMTAVASHREEFEFEHHAGGPNLDATPNDIIARIERYS--- 123 (182)
T ss_dssp TEEEEEEECCCTTSTTHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHTGGGGSCBTTTBSGGGGCCHHHHHHHHHHHH---
T ss_pred CEEEEEEEcCCCCCccHHHHHHHHHHHHHhccChHHHHHHHHHHHhcCcccccccccccccCCCCHHHHHHHHHHHh---
Confidence 556655531 1 247889999998873 2 45544 89998 342 345678888777777664
Q ss_pred cCCChhHHHHcccCChhHHHHHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHH
Q 031378 79 IGNSYSSALESGFSDRSTDLLTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 79 ~Gld~~~~f~~~l~~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~I 141 (160)
|+| .+++ ++++++...++.+.++++++||+|||||+|||+++++.+|++++++|.++|
T Consensus 124 -Gld-~~~~---l~~~~~~~~v~~~~~~a~~~GV~gtPtf~ing~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 124 -GLA-LAEA---FANPELEHAVKWHTKYARQNGIHVSPTFMINGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp -TCC-CHHH---HHCGGGHHHHHHHHHHHHHHTCCSSSEEEETTEECTTCCTTSCHHHHHHHH
T ss_pred -CCC-HHHH---hcChHHHHHHHHHHHHHHHCCCCccCEEEECCEEccCCCCCCCHHHHHHHh
Confidence 999 4877 778899999999999999999999999999999998888999999999987
No 2
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=99.57 E-value=1.3e-14 Score=109.03 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=66.2
Q ss_pred HHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 70 EIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 70 ~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.+.+.+.+ .|+| .++|++|++++++...++.+.+.++++||+|||||+|||+.+.+..+..++++|.++|+.++.++
T Consensus 108 ~l~~~a~~-~Gld-~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiINGky~v~~~~~~s~e~~~~~i~~Ll~kk 184 (184)
T 4dvc_A 108 ELRQIFLD-EGID-AAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVVNNRYLVQGQSAKSLDEYFDLVNYLLTLK 184 (184)
T ss_dssp HHHHHHHT-TTCC-HHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEETTTEEECGGGCSSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHH-hCCC-HHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEECCEEeeCCcCCCCHHHHHHHHHHHHhCc
Confidence 45566666 5999 59999999999999999999999999999999999999986544444566999999999998764
No 3
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=99.56 E-value=1.1e-14 Score=114.51 Aligned_cols=124 Identities=22% Similarity=0.223 Sum_probs=89.8
Q ss_pred eeeeeccCchh-hhHHHHHHHHHhhhh-----HHHHh--chhhhhcCCCCCCChH-----------HHHH------HHHH
Q 031378 19 KLASYFRDKFV-CFFLVVLYIKRRLNC-----LLEIV--QQEKFYNAPTQNMTRT-----------AVVK------EIVK 73 (160)
Q Consensus 19 ~~~~~~~~~~~-~~a~ra~~aar~~~~-----~l~~~--~Q~~f~~~~~~~~t~~-----------~i~~------~la~ 73 (160)
+|.+++|.=.. ..+.+|.++++|.++ +.+.+ +|+.|..... ..+.. +.+. .|.+
T Consensus 50 ~v~~v~r~~pl~~~s~~aa~aa~~~~~~~f~~~~~~Lf~~q~~~~~~~~-~~~~~~~~~w~~~~~~~~l~~ia~~~~L~~ 128 (205)
T 3gmf_A 50 KGAIEVRNFVRDPIDMTVALITNCVPPSRFFTLHTAFMRSQAQWIGPLA-NSTEAQRQRWFNGTFATRTRAIASDFRFYD 128 (205)
T ss_dssp SEEEEEEECCCSHHHHHHHHHHHHSCHHHHHHHHHHHHHTHHHHCHHHH-HCCHHHHHTTSSSCHHHHHHHHHHHTTHHH
T ss_pred eEEEEEEeCCCCcchHHHHHHHHhcCHhHHHHHHHHHHHcCHHHHhccc-ccchhhhhccccchhHHHHHhccCHHHHHH
Confidence 55555553211 235567788888766 44444 8998854211 11221 1121 2455
Q ss_pred HHHhhcCCChhHHHHcccCChhHHHHHHHHHHHh-hcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 74 FAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFS-ATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 74 ~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a-~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.+.+ +|+| .++|+++++++++...++.+.+.+ +++||+|||||+|||+.+.|+.+ +++|.++|++++...
T Consensus 129 ~a~~-~Gld-~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvvng~~~~G~~~---~e~l~~~i~~~~~~~ 199 (205)
T 3gmf_A 129 FMAA-RGMD-RSTLDRCLSNEALAKKLAAETDEAINQYNVSGTPSFMIDGILLAGTHD---WASLRPQILARLNEG 199 (205)
T ss_dssp HHHT-TTCC-HHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSSEEEETTEECTTCCS---HHHHHHHHHHHHTC-
T ss_pred HHHH-cCCC-HHHHHHHHcCHHHHHHHHHHHHHHHHHcCCccCCEEEECCEEEeCCCC---HHHHHHHHHHHhhcc
Confidence 5555 6999 599999999999999999999999 99999999999999999998666 999999999988654
No 4
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=99.51 E-value=7.7e-14 Score=108.92 Aligned_cols=77 Identities=16% Similarity=0.196 Sum_probs=67.0
Q ss_pred HHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 70 EIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 70 ~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
.+.+.|.+.+|+| .++|.++++++.+...++.+.+.++++||+|||||+|||+.+.|+.+ +++|.++|++++.+|-
T Consensus 120 ~L~~~a~~~~Gld-~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvvnG~~~~G~~~---~e~l~~~i~~~~~~~~ 195 (202)
T 3gha_A 120 LLGDLAKSTTKIK-PETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKVIKNFAD---YDEIKETIEKELKGKL 195 (202)
T ss_dssp HHHHHHHHHSSSC-HHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEETTEECSCTTC---HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCCC-HHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEECCEEecCCCC---HHHHHHHHHHHHHhhh
Confidence 4556665535999 59999999999999999999999999999999999999999988555 9999999999999885
Q ss_pred C
Q 031378 150 K 150 (160)
Q Consensus 150 ~ 150 (160)
+
T Consensus 196 ~ 196 (202)
T 3gha_A 196 E 196 (202)
T ss_dssp -
T ss_pred h
Confidence 5
No 5
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=99.49 E-value=2.1e-13 Score=103.73 Aligned_cols=108 Identities=12% Similarity=0.111 Sum_probs=79.6
Q ss_pred hhhHHHHHHHHHhhhh-----HHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHH---HHccc--CChhH
Q 031378 29 VCFFLVVLYIKRRLNC-----LLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSA---LESGF--SDRST 96 (160)
Q Consensus 29 ~~~a~ra~~aar~~~~-----~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~---f~~~l--~~~~~ 96 (160)
+.++++++.++.+.+| +.+.+ .|..... ...+. +.+.+.|.+ +|++ .++ |.+++ ++.++
T Consensus 61 s~~aa~a~~~a~~~~~~~~~~~~~~lf~~~~~~~~---~~~~~----~~l~~~a~~-~Gld-~~~~~~~~~~~~~~~~~~ 131 (186)
T 3bci_A 61 SIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENK---EWLTK----ELLDKHIKQ-LHLD-KETENKIIKDYKTKDSKS 131 (186)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCCTTS---CCCCH----HHHHHHHHT-TCCC-HHHHHHHHHHHHSTTCHH
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHHHHhcCcccCC---CCCCH----HHHHHHHHH-cCCC-HHHHHHHHHHHHhcCHHH
Confidence 3589999999988875 44433 4443211 11222 345556655 5999 588 99999 99999
Q ss_pred HHHHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 97 DLLTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 97 ~~~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
...++.+.+.++++||+|||||+|||+.+.|..+ +++|.++|+.++.+.
T Consensus 132 ~~~v~~~~~~a~~~gv~GtPt~vvnG~~~~G~~~---~~~l~~~i~~~~~~~ 180 (186)
T 3bci_A 132 WKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYD---YESYEKLLKDKIKLE 180 (186)
T ss_dssp HHHHHHHHHHHHHTTCCSSSEEEETTEECSCTTC---HHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEECCEEcCCCCC---HHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999987555 999999999887443
No 6
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=99.46 E-value=5.9e-13 Score=103.35 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHhhhhHHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHHh
Q 031378 30 CFFLVVLYIKRRLNCLLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFS 107 (160)
Q Consensus 30 ~~a~ra~~aar~~~~~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a 107 (160)
.+|+|++.+|+..++..++. -++.++.. +.+.+..+++ .+.|.+ +|+| .++|.++++++++...++.+.+.+
T Consensus 89 ~~a~r~~~aa~~~g~~~~~~~~l~~a~~~~-~~~~~~~~~l---~~~a~~-~Gld-~~~~~~~~~s~~~~~~v~~~~~~a 162 (208)
T 3kzq_A 89 YQSCRAVIAAGFQDSYEQMLEAIQHAYYLR-AMPPHEEATH---LQLAKE-IGLN-VQQFKNDMDGTLLEGVFQDQLSLA 162 (208)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHTS-CCCTTCHHHH---HHHHHH-TTCC-HHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHc-CCCCCCHHHH---HHHHHH-cCCC-HHHHHHHHhChHHHHHHHHHHHHH
Confidence 49999999999988722222 34455543 3455554444 444445 5999 599999999999999999999999
Q ss_pred hcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 108 ATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 108 ~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
+++||+|||||+| ||+.+.+..+..+.+++.+.|+.++.+.+
T Consensus 163 ~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~~~~ 206 (208)
T 3kzq_A 163 KSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIENM 206 (208)
T ss_dssp HHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHHHTC
T ss_pred HHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHHhccc
Confidence 9999999999999 46665544455569999999999997764
No 7
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=99.46 E-value=2.4e-13 Score=104.05 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=84.4
Q ss_pred hhhHHHHHHHHHhhhh--HHHHhchhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHH
Q 031378 29 VCFFLVVLYIKRRLNC--LLEIVQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKF 106 (160)
Q Consensus 29 ~~~a~ra~~aar~~~~--~l~~~~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~ 106 (160)
+.++.++..++++++. +.+.+ .+.++.. ..+....+ .+.+.+.+ +|++ .++|.+++++.++...++.+.+.
T Consensus 71 s~~aa~a~~aa~~~g~~~~~~~l-f~~~~~~-~~~~~~~~---~l~~~a~~-~Gld-~~~~~~~~~s~~~~~~v~~~~~~ 143 (195)
T 3hd5_A 71 MKPLQQLYYTLQALERPDLHPKV-FTAIHTE-RKRLFDKK---AMGEWAAS-QGVD-RAKFDSVFDSFSVQTQVQRASQL 143 (195)
T ss_dssp GHHHHHHHHHHHHTTCTTHHHHH-HHHHHTS-CCCCCSHH---HHHHHHHH-TTCC-HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHH-HHHHHHh-ccCCCCHH---HHHHHHHH-hCCC-HHHHHHHHcCHHHHHHHHHHHHH
Confidence 3578888888887762 33322 1111221 22333333 34555555 5999 59999999999999999999999
Q ss_pred hhcCCccccceEEECCEEecCCCCCCCH-HHHHHHHHHHhhhcCC
Q 031378 107 SATRGVYATPTFFVNGFSLAGAGSPLDY-NGWRKVIDPLLSEKGK 150 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~ga~s~~~~-e~~~~~Id~~l~~~~~ 150 (160)
++++||+|||||+|||+.+.+.....+. ++|.++|+.++.+...
T Consensus 144 a~~~gv~gtPt~ving~~~~~g~~~~~~~e~~~~~i~~L~~~~~~ 188 (195)
T 3hd5_A 144 AEAAHIDGTPAFAVGGRYMTSPVLAGNDYAGALKVVDQLIVQSRE 188 (195)
T ss_dssp HHHTTCCSSSEEEETTTEEECTTTTTGGGTTHHHHHHHHHHHHHC
T ss_pred HHHhCCCcCceEEECCEEEeCccccCChHHHHHHHHHHHHHHHhc
Confidence 9999999999999999988765555567 9999999999988743
No 8
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=99.45 E-value=5e-13 Score=103.85 Aligned_cols=104 Identities=15% Similarity=0.191 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHhhhh--HHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNC--LLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFK 105 (160)
Q Consensus 30 ~~a~ra~~aar~~~~--~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k 105 (160)
.+|||++.+++..+| ..++. -+..+|.. +.+.+..+++..++ .+ +|+| .++|.++++++++...++.+.+
T Consensus 91 ~~a~r~~~~a~~~g~~~~~~~~~alf~a~~~~-g~~i~~~~~L~~~a---~~-~Gld-~~~~~~~~~s~~~~~~v~~~~~ 164 (202)
T 3fz5_A 91 LAATRAFYWIEAQSPDAATAFAQRVFDLYFSD-RLDTASPEAVSRLG---PE-VGLE-PEALLAGIADPALKETVRKIGE 164 (202)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTT-CCCTTCHHHHHTTH---HH-HTCC-HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHhc-CCCCCCHHHHHHHH---HH-cCCC-HHHHHHHhcCHHHHHHHHHHHH
Confidence 489999999998875 22333 34555554 44555555544444 44 3999 5999999999999999999999
Q ss_pred HhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.++++||+|||||+|||+.+.|..+ ++.+.+.|.
T Consensus 165 ~a~~~Gv~GvPtfvv~g~~~~G~~~---~~~l~~~l~ 198 (202)
T 3fz5_A 165 DAVARGIFGSPFFLVDDEPFWGWDR---MEMMAEWIR 198 (202)
T ss_dssp HHHHTTCCSSSEEEETTEEEESGGG---HHHHHHHHH
T ss_pred HHHHCCCCcCCEEEECCEEEecCCC---HHHHHHHHh
Confidence 9999999999999999999999776 888877775
No 9
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=99.45 E-value=4.2e-13 Score=107.38 Aligned_cols=110 Identities=12% Similarity=0.138 Sum_probs=87.3
Q ss_pred hhHHHHHHHHHhhhhHHHHh--chhhhhcCCCCCCCh-HHHHHHHHHHHHhhcCCChhHHHHcccCC-hhHHHHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNCLLEIV--QQEKFYNAPTQNMTR-TAVVKEIVKFAAEGIGNSYSSALESGFSD-RSTDLLTRVSFK 105 (160)
Q Consensus 30 ~~a~ra~~aar~~~~~l~~~--~Q~~f~~~~~~~~t~-~~i~~~la~~A~~~~Gld~~~~f~~~l~~-~~~~~~i~~~~k 105 (160)
.+|||++.+|+..+...++. -+..||.. +.+.+. .+++.. .|.+ +|+| .++|.+++++ ++....++.+.+
T Consensus 101 ~~a~r~~~~A~~~g~~~~~~~alf~a~~~~-g~~i~d~~~~L~~---~a~~-~Gld-~~~~~~~l~s~~~~~~~v~~~~~ 174 (239)
T 3gl5_A 101 FDLHRLLHLAKERGRHEALLDAFYRGNFAD-ERSVFNDDERLVE---LAVG-AGLD-AEEVRAVLADPAAYADEVRADER 174 (239)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHTC-SSCCSSCHHHHHH---HHHH-TTCC-HHHHHHHHHCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcHHHHHHHHHHHHHhc-CCCCCCHHHHHHH---HHHH-cCCC-HHHHHHHHcCcHhHHHHHHHHHH
Confidence 49999999999876522222 34455554 445665 555444 4444 5999 5999999999 999999999999
Q ss_pred HhhcCCccccceEEECCE-EecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFVNGF-SLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~-~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||+|||||+|||+ .+.|+.+ ++.|.+.|++++...
T Consensus 175 ~a~~~Gv~GvPtfvv~g~~~v~Ga~~---~e~~~~~i~~~~~~~ 215 (239)
T 3gl5_A 175 EAAQLGATGVPFFVLDRAYGVSGAQP---AEVFTQALTQAWGER 215 (239)
T ss_dssp HHHHTTCCSSSEEEETTTEEEESSCC---HHHHHHHHHHHHHTC
T ss_pred HHHHCCCCeeCeEEECCcEeecCCCC---HHHHHHHHHHHHhhc
Confidence 999999999999999997 6888777 999999999999765
No 10
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=99.44 E-value=1.7e-13 Score=106.01 Aligned_cols=109 Identities=13% Similarity=0.116 Sum_probs=84.3
Q ss_pred hhHHHHHHHHHhhhh---HHHHhchhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNC---LLEIVQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKF 106 (160)
Q Consensus 30 ~~a~ra~~aar~~~~---~l~~~~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~ 106 (160)
.+|+|++.+++..+. +.+.+ ++.+|.. +.+.+..+++..+ |.+ +|+| .++|.++++++++...++.+.+.
T Consensus 87 ~~a~r~~~~a~~~g~~~~~~~~l-f~a~~~~-~~~i~~~~~L~~~---a~~-~Gld-~~~~~~~~~s~~~~~~v~~~~~~ 159 (203)
T 2imf_A 87 RRMNIGFYYSGAEAQAAAYVNVV-FNAVWGE-GIAPDLESLPALV---SEK-LGWD-RSAFEHFLSSNAATERYDEQTHA 159 (203)
T ss_dssp HHHHHHGGGCCSHHHHHHHHHHH-HHHHHHS-CCCTTCTTHHHHH---HHH-HTCC-HHHHHHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcChHHHHHHHH-HHHHHcC-CCCCCCHHHHHHH---HHH-cCCC-HHHHHHHhcCHHHHHHHHHHHHH
Confidence 378888888877654 33333 3334443 3455544444444 444 4999 59999999999999999999999
Q ss_pred hhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 107 SATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
++++||+|||||+|||+.+.|+.+ ++.+.+.|+..+..+
T Consensus 160 a~~~Gv~G~Ptfvi~g~~~~G~~~---~~~l~~~l~~~~~~~ 198 (203)
T 2imf_A 160 AIERKVFGVPTMFLGDEMWWGNDR---LFMLESAMGRLCRQN 198 (203)
T ss_dssp HHHTTCCSSSEEEETTEEEESGGG---HHHHHHHHHHHHHHH
T ss_pred HHHCCCCcCCEEEECCEEEECCCC---HHHHHHHHhcccccc
Confidence 999999999999999999998777 999999999988665
No 11
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=99.44 E-value=2.1e-13 Score=104.09 Aligned_cols=110 Identities=17% Similarity=0.164 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHhhhh---HHHHhchhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNC---LLEIVQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKF 106 (160)
Q Consensus 30 ~~a~ra~~aar~~~~---~l~~~~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~ 106 (160)
.+++++..++++.+. +.+.+ ...++.. ..+....+ .+.+.+.+ +|+| .++|.++++++.+...++.+.+.
T Consensus 72 ~~aa~a~~aa~~~g~~~~~~~~l-f~~~~~~-~~~~~~~~---~l~~~a~~-~Gld-~~~~~~~~~~~~~~~~v~~~~~~ 144 (192)
T 3h93_A 72 NVHGQMFLTLESMGVEHDVHNAV-FEAIHKE-HKKLATPE---EMADFLAG-KGVD-KEKFLSTYNSFAIKGQMEKAKKL 144 (192)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHH-HHHHHTS-CCCCCSHH---HHHHHHHT-TTCC-HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHH-HHHHHHh-CcCCCCHH---HHHHHHHH-cCCC-HHHHHHHhhCHHHHHHHHHHHHH
Confidence 588899999988776 33333 1222332 22333333 35555555 5999 59999999999999999999999
Q ss_pred hhcCCccccceEEECCEEec---CCCCCCCHHHHHHHHHHHhhhcC
Q 031378 107 SATRGVYATPTFFVNGFSLA---GAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~---ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
++++||+|||||+|||+.+. |+.+ +++|.++|+.++.+.+
T Consensus 145 a~~~gv~gtPt~~vng~~~~~~~G~~~---~e~l~~~i~~l~~k~~ 187 (192)
T 3h93_A 145 AMAYQVTGVPTMVVNGKYRFDIGSAGG---PEETLKLADYLIEKER 187 (192)
T ss_dssp HHHHTCCSSSEEEETTTEEEEHHHHTS---HHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEECCEEEecccccCC---HHHHHHHHHHHHHHHH
Confidence 99999999999999999875 6555 9999999999986643
No 12
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.43 E-value=9.9e-13 Score=98.65 Aligned_cols=102 Identities=14% Similarity=0.169 Sum_probs=80.8
Q ss_pred hhhHHHHHHHHHhhhh---HHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHH
Q 031378 29 VCFFLVVLYIKRRLNC---LLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVS 103 (160)
Q Consensus 29 ~~~a~ra~~aar~~~~---~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~ 103 (160)
+..++++..++.+.+. +.+.+ .|. +.+. +.+.+.+.+ +|++ .++|.++++++++...++.+
T Consensus 68 s~~aa~~~~~a~~~~~~~~~~~~lf~~~~--------~~~~----~~l~~~a~~-~Gld-~~~~~~~~~~~~~~~~v~~~ 133 (175)
T 3gyk_A 68 SDFAARAALAARQQGKYEAFHWALMGMSG--------KANE----TGVLRIARE-VGLD-TEQLQRDMEAPEVTAHIAQS 133 (175)
T ss_dssp HHHHHHHHHHGGGGTCHHHHHHHHHTCSS--------CCSH----HHHHHHHHH-TTCC-HHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHhcCC--------CCCH----HHHHHHHHH-cCCC-HHHHHHHHhChHHHHHHHHH
Confidence 3578888888877754 33333 332 2233 345566655 5999 59999999999999999999
Q ss_pred HHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 104 FKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.+.++++||+|||||+|||+.+.|..+ +++|.+.|++++++
T Consensus 134 ~~~a~~~gv~gtPt~~i~g~~~~G~~~---~~~l~~~i~~~l~~ 174 (175)
T 3gyk_A 134 MALAQKLGFNGTPSFVVEDALVPGFVE---QSQLQDAVDRARKA 174 (175)
T ss_dssp HHHHHHHTCCSSSEEEETTEEECSCCC---HHHHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEECCEEeeCCCC---HHHHHHHHHHHHhc
Confidence 999999999999999999999998666 99999999998854
No 13
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=99.43 E-value=1.7e-12 Score=100.47 Aligned_cols=109 Identities=17% Similarity=0.237 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHhhhh--HHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNC--LLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFK 105 (160)
Q Consensus 30 ~~a~ra~~aar~~~~--~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k 105 (160)
.+|+|++.+++..+| ..++. -++.+|.. +.+.+..+++ .+.|.+ +|+| .++|.+++++.++...++.+.+
T Consensus 94 ~~a~r~~~~a~~~~~~~~~~~~~~lf~a~~~~-~~~~~~~~~l---~~~a~~-~Gld-~~~~~~~~~~~~~~~~v~~~~~ 167 (216)
T 2in3_A 94 EPACRGVVSVSLIEPEKVFPFFAAIQRAFYVG-QEDVAQLAIL---KKLAVD-LGIP-ESRFTPVFQSDEAKQRTLAGFQ 167 (216)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTT-CCCTTSHHHH---HHHHHH-TTCC-HHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHhc-CCCCCCHHHH---HHHHHH-cCCC-HHHHHHHhcchHHHHHHHHHHH
Confidence 489999999998844 22322 33444543 3455544444 444444 5999 5999999999999999999999
Q ss_pred HhhcCCccccceEEE--CCEE---ecCCCCCCCHHHHHHHHHHHhhh
Q 031378 106 FSATRGVYATPTFFV--NGFS---LAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~---~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.++++||+|||||+| ||+. +.|+.+ .++|.++|++++.+
T Consensus 168 ~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~---~~~l~~~l~~~~~~ 211 (216)
T 2in3_A 168 RVAQWGISGFPALVVESGTDRYLITTGYRP---IEALRQLLDTWLQQ 211 (216)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEESSCCC---HHHHHHHHHHHHHH
T ss_pred HHHHcCCcccceEEEEECCEEEEeccCCCC---HHHHHHHHHHHHHh
Confidence 999999999999999 9995 677666 99999999998865
No 14
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=99.40 E-value=1.5e-12 Score=100.51 Aligned_cols=109 Identities=12% Similarity=0.100 Sum_probs=82.2
Q ss_pred hhHHHHHHHHHhhhh-H---H-H-HhchhhhhcCCCCCCChHHHHHHHHHHHHhhc-CCChhHHHHcccCChhHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNC-L---L-E-IVQQEKFYNAPTQNMTRTAVVKEIVKFAAEGI-GNSYSSALESGFSDRSTDLLTRV 102 (160)
Q Consensus 30 ~~a~ra~~aar~~~~-~---l-~-~~~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~-Gld~~~~f~~~l~~~~~~~~i~~ 102 (160)
.++.++..++++++. . + + +| +.++.. ..+.... +.+.+.+.+ + |+| .++|.+++++..+...++.
T Consensus 71 ~~aa~a~~aa~~~g~~~~~~~~~~lf--~a~~~~-~~~~~~~---~~l~~~a~~-~~Gld-~~~~~~~~~s~~~~~~v~~ 142 (193)
T 3hz8_A 71 LTLARLAAAVDMAAADSKDVANSHIF--DAMVNQ-KIKLQNP---EVLKKWLGE-QTAFD-GKKVLAAYESPESQARADK 142 (193)
T ss_dssp HHHHHHHHHHHHHTGGGHHHHHHHHH--HHHHTS-CCCTTSH---HHHHHHHHH-CTTTT-HHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchhHHhHHHHHH--HHHHHh-CcCCCCH---HHHHHHHHH-ccCCC-HHHHHHHHcCHHHHHHHHH
Confidence 478889999888875 2 2 2 22 111111 1122222 345566666 6 999 5999999999999999999
Q ss_pred HHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 103 SFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 103 ~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
+.+.++++||+|||||+|||+.+.|.. ++++|.++|+.++.+.+
T Consensus 143 ~~~~a~~~gv~gtPt~vvng~~~~~~~---~~e~l~~~i~~ll~k~r 186 (193)
T 3hz8_A 143 MQELTETFQIDGVPTVIVGGKYKVEFA---DWESGMNTIDLLADKVR 186 (193)
T ss_dssp HHHHHHHTTCCSSSEEEETTTEEECCS---SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCEEEECCEEEecCC---CHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988743 69999999999987654
No 15
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=99.39 E-value=1.5e-12 Score=98.86 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=80.8
Q ss_pred hhHHHHHHHHHhhhh---HHHH-h-chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNC---LLEI-V-QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSF 104 (160)
Q Consensus 30 ~~a~ra~~aar~~~~---~l~~-~-~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~ 104 (160)
.+++++..++++.+. +.+. | .|...... ..+.... +.+.+.+.+ .|++ .++|.+++++..+...++.+.
T Consensus 72 ~~a~~a~~~a~~~~~~~~~~~~lf~~~~~~~~~-~~~~~~~---~~l~~~a~~-~Gld-~~~~~~~~~~~~~~~~v~~~~ 145 (193)
T 2rem_A 72 DPFARAYLAADVLGVAKRSHTAMFEAIHEKGSV-PIQNVGP---DELAVFYAG-YGVQ-PDRFVATFNGPEVEKRFQAAR 145 (193)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CSTTCCH---HHHHHHHHT-TTCC-HHHHHHHHTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHhccc-CcCCCCH---HHHHHHHHH-cCCC-HHHHHHHHhChHHHHHHHHHH
Confidence 589999999998865 3333 3 33221110 0012222 235555655 5999 599999999999999999999
Q ss_pred HHhhcCCccccceEEECCEEe-cCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFVNGFSL-AGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffING~~~-~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
+.++++||+|||||+|||+.+ .|. ++++|.++|+.++.+.
T Consensus 146 ~~a~~~gv~gtPt~ving~~~~~g~----~~~~l~~~i~~~~~~~ 186 (193)
T 2rem_A 146 AYALKVRPVGTPTIVVNGRYMVTGH----DFEDTLRITDYLVSRE 186 (193)
T ss_dssp HHHHHHCCSSSSEEEETTTEEECCS----SHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEEECCEEEecCC----CHHHHHHHHHHHHHHH
Confidence 999999999999999999976 443 5999999999998654
No 16
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=99.36 E-value=3.1e-12 Score=98.97 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=80.6
Q ss_pred hhhHHHHHHHHHhhhh---HHH-Hh-c-hhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHH
Q 031378 29 VCFFLVVLYIKRRLNC---LLE-IV-Q-QEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRV 102 (160)
Q Consensus 29 ~~~a~ra~~aar~~~~---~l~-~~-~-Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~ 102 (160)
+.++.++..++++++. +.+ +| . |.+.. .... +.+.+.+.+ +|+| .++|++++++++....++.
T Consensus 71 s~~aa~a~~aA~~~g~~~~~~~~lf~a~~~~~~------~~~~---~~L~~~a~~-~Gld-~~~~~~~~~s~~~~~~v~~ 139 (191)
T 3l9s_A 71 GKELTQAWAVAMALGVEDKVTVPLFEAVQKTQT------VQSA---ADIRKVFVD-AGVK-GEDYDAAWNSFVVKSLVAQ 139 (191)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTSCC------CSSH---HHHHHHHHH-TTCC-HHHHHHHHTSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC------CCCH---HHHHHHHHH-cCCC-HHHHHHHHhCHHHHHHHHH
Confidence 4688899999999876 333 34 2 33221 1222 245566666 5999 5999999999999999999
Q ss_pred HHHHhhcCCccccceEEECCEEecCCCCCCC------HHHHHHHHHHHhhhc
Q 031378 103 SFKFSATRGVYATPTFFVNGFSLAGAGSPLD------YNGWRKVIDPLLSEK 148 (160)
Q Consensus 103 ~~k~a~~~GV~GTPTffING~~~~ga~s~~~------~e~~~~~Id~~l~~~ 148 (160)
+.+.++++||+|||||+|||+.+....+.-+ .+++.++|+-++.++
T Consensus 140 ~~~~a~~~gv~gtPtfvvnG~~~v~~~~~~~~~~~~~~~~~~~~i~~L~~k~ 191 (191)
T 3l9s_A 140 QEKAAADLQLQGVPAMFVNGKYQINPQGMDTSSMDVFVQQYADTVKYLVDKK 191 (191)
T ss_dssp HHHHHHHTTCCSSSEEEETTTEEECGGGSCCSSHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhCCcccCEEEECCEEEECccccCCccchhhHHHHHHHHHHHHcCC
Confidence 9999999999999999999997654333233 368999999888654
No 17
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=99.36 E-value=3.6e-12 Score=98.01 Aligned_cols=112 Identities=10% Similarity=0.121 Sum_probs=78.9
Q ss_pred hhhHHHHHHHHHhhhh---HH-HHh-chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHH
Q 031378 29 VCFFLVVLYIKRRLNC---LL-EIV-QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVS 103 (160)
Q Consensus 29 ~~~a~ra~~aar~~~~---~l-~~~-~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~ 103 (160)
+.+++|+..+++..+. +. .+| .+. ... . ..++ +.+.+.+.+..|+| .++|.++++++++...++.+
T Consensus 64 s~~aa~a~~aA~~~g~~~~~~~~lf~a~~--~~~-~-~~~~----~~l~~~a~~~~Gld-~~~~~~~~~s~~~~~~v~~~ 134 (189)
T 3l9v_A 64 GHELTRAWALAMVMKETDVIEKAFFTAGM--VEK-R-LHSP----DDVRRVFMSATGIS-RGEYDRSIKSPAVNDMVALQ 134 (189)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHT--TTC-C-CCSH----HHHHHHHHHHHCCC-HHHHHHHTTSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCcHHHHHHHHHHHHh--hhc-c-CCCH----HHHHHHHHHccCCC-HHHHHHHHhhHHHHHHHHHH
Confidence 4588899888888864 33 333 211 111 1 1122 34556665523999 59999999999999999999
Q ss_pred HHHhhcCCccccceEEECCEEecCCC--CCCCH----HHHHHHHHHHhhhcC
Q 031378 104 FKFSATRGVYATPTFFVNGFSLAGAG--SPLDY----NGWRKVIDPLLSEKG 149 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffING~~~~ga~--s~~~~----e~~~~~Id~~l~~~~ 149 (160)
.+.++++||+|||||+|||+...... ++.+. +++.++|+.++.++.
T Consensus 135 ~~~a~~~gv~GtPt~~vng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li~k~~ 186 (189)
T 3l9v_A 135 ERLFKEYGVRGTPSVYVRGRYHINNAAFGAFSVENFRSRYAAVVRKLLAGNP 186 (189)
T ss_dssp HHHHHHTTCCSSSEEEETTTEEECGGGCCCSSHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHhCCCccCEEEECCEEEECccccccccccchHHHHHHHHHHHHhCCC
Confidence 99999999999999999998654322 22222 889999999998763
No 18
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=99.35 E-value=1.5e-12 Score=103.60 Aligned_cols=109 Identities=14% Similarity=0.142 Sum_probs=79.9
Q ss_pred HHHHHHHHHhhhh------HHH-Hh-chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChhHHHHcccCChhHHHHHHHH
Q 031378 32 FLVVLYIKRRLNC------LLE-IV-QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVS 103 (160)
Q Consensus 32 a~ra~~aar~~~~------~l~-~~-~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~ 103 (160)
+.+|..++.|.+. +.+ +| .|..|.... .... +.|.+.|.+ +|+| .++|.+++++.+....++.+
T Consensus 88 s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~~~~~~~---~~~~---~~L~~iA~~-~Gld-~~~~~~~l~s~~~~~~v~~~ 159 (226)
T 3f4s_A 88 GLKAAMLSHCYEKQEDYFNFNKAVFNSIDSWNYYN---LSDL---TLLQRIAAL-SNLK-QDAFNQCINDKKIMDKIVND 159 (226)
T ss_dssp HHHHHHHGGGCCSHHHHHHHHHHHHHTGGGSCSSS---TTCC---HHHHHHHHH-TTCC-HHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhChHHHHHHHHHHHHhCHhhcccc---cCcH---HHHHHHHHH-cCCC-HHHHHHHHhCHHHHHHHHHH
Confidence 4445555555322 344 44 787774421 1112 345566655 5999 59999999999999999999
Q ss_pred HHHhhc-CCccccceEEE---CCEEecCCCC-----CCCHHHHHHHHHHHhhhc
Q 031378 104 FKFSAT-RGVYATPTFFV---NGFSLAGAGS-----PLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 104 ~k~a~~-~GV~GTPTffI---NG~~~~ga~s-----~~~~e~~~~~Id~~l~~~ 148 (160)
.+.|++ +||+|||||+| ||+.+.|+.+ ..++++|.++|++++++.
T Consensus 160 ~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l~~~ 213 (226)
T 3f4s_A 160 KSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLYGKA 213 (226)
T ss_dssp HHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHHhcC
Confidence 999999 99999999999 9998876321 344999999999999765
No 19
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=99.32 E-value=7.1e-12 Score=95.45 Aligned_cols=108 Identities=13% Similarity=0.063 Sum_probs=80.5
Q ss_pred hhhHHHHHHHHHhhhh---HHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhc-CCChhHHHHcccCChhHHHHHHH
Q 031378 29 VCFFLVVLYIKRRLNC---LLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGI-GNSYSSALESGFSDRSTDLLTRV 102 (160)
Q Consensus 29 ~~~a~ra~~aar~~~~---~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~-Gld~~~~f~~~l~~~~~~~~i~~ 102 (160)
+.+++++..+++..+. +.+.+ .|.. . +.+.... +.+.+.+.+ . |++ .++|.+++++.++...++.
T Consensus 68 s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~--~--~~~~~~~---~~l~~~a~~-~~Gld-~~~~~~~~~~~~~~~~v~~ 138 (195)
T 2znm_A 68 MLGLARMAAAVNLSGLKYQANPAVFKAVYE--Q--KIRLENR---SVAGKWALS-QKGFD-GKKLMRAYDSPEAAAAALK 138 (195)
T ss_dssp GHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--C--SSCTTSH---HHHHHHHHT-CSSSC-HHHHHHHHTSHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCcHHHHHHHHHHHHHH--h--CCCCCCH---HHHHHHHHH-cCCCC-HHHHHHHhcCHHHHHHHHH
Confidence 3588999999887765 33333 3221 1 1122222 235555555 7 999 5999999999999999999
Q ss_pred HHHHhhcCCccccceEEECCEE-ecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 103 SFKFSATRGVYATPTFFVNGFS-LAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 103 ~~k~a~~~GV~GTPTffING~~-~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
+.+.++++||+|||||+|||+. +.|+ .+.++|.+.|+.++.+.
T Consensus 139 ~~~~a~~~gv~gtPt~ving~~~~~g~---~~~~~l~~~i~~~l~~~ 182 (195)
T 2znm_A 139 MQKLTEQYRIDSTPTVIVGGKYRVIFN---NGFDGGVHTIKELVAKV 182 (195)
T ss_dssp HHHHHHHTTCCSSSEEEETTTEEECCC---SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCeEEECCEEEEcCC---CCHHHHHHHHHHHHHHH
Confidence 9999999999999999999985 6664 44999999999988553
No 20
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=99.32 E-value=3.3e-12 Score=96.87 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=77.8
Q ss_pred hhhHHHHHHHHHhhhh---H---------HHHh--chhhhhcCCCCCCChHHHHHHHHHH-HHhhcCCChhHHHHcccCC
Q 031378 29 VCFFLVVLYIKRRLNC---L---------LEIV--QQEKFYNAPTQNMTRTAVVKEIVKF-AAEGIGNSYSSALESGFSD 93 (160)
Q Consensus 29 ~~~a~ra~~aar~~~~---~---------l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~-A~~~~Gld~~~~f~~~l~~ 93 (160)
...+.++..++++++. + .++. -++.++.. ..+.+..+.+..+.+. +.+ +|+| .++|.+++++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~~~l~~~~~~~a~~-~Gld-~~~~~~~~~~ 141 (195)
T 3c7m_A 65 GKQASEVFAVLINKDKAAGISLFDANSQFKKAKFAYYAAYHDK-KERWSDGKDPAAFIKTGLDA-AGMS-QADFEAALKE 141 (195)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTSTTCHHHHHHHHHHHHHHTS-CCCTTTTTCHHHHHHHHHHH-HTCC-HHHHHHHHTS
T ss_pred cHHHHHHHHHHHHhhhhcCCCchhHHHHHHHHHHHHHHHHHhc-CCCCCCHHHHHHHHHhHHHH-cCCC-HHHHHHHHcC
Confidence 3566666666776653 1 1111 22333332 2334333344445333 444 5999 5999999999
Q ss_pred hhHHHHHHHHHHHhhcCCccccceEEECCEEe-c--CCCCCCCHHHHHHHHHHHhh
Q 031378 94 RSTDLLTRVSFKFSATRGVYATPTFFVNGFSL-A--GAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 94 ~~~~~~i~~~~k~a~~~GV~GTPTffING~~~-~--ga~s~~~~e~~~~~Id~~l~ 146 (160)
+++...++.+.+.++++||+|||||+|||+.. . |+.+ +++|.++|+.+++
T Consensus 142 ~~~~~~v~~~~~~a~~~gv~gtPt~~ing~~~~~~~g~~~---~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 142 PAVQETLEKWKASYDVAKIQGVPAYVVNGKYLIYTKSIKS---IDAMADLIRELAS 194 (195)
T ss_dssp HHHHHHHHHGGGHHHHHHHHCSSEEEETTTEEECGGGCCC---HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCCCccCEEEECCEEEeccCCCCC---HHHHHHHHHHHHh
Confidence 99999999999999999999999999999863 3 4444 9999999999875
No 21
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=99.28 E-value=2.1e-11 Score=95.91 Aligned_cols=108 Identities=12% Similarity=0.110 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHhhhh--HHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCCh--hHHHHcccCChhHHHHHHHH
Q 031378 30 CFFLVVLYIKRRLNC--LLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSY--SSALESGFSDRSTDLLTRVS 103 (160)
Q Consensus 30 ~~a~ra~~aar~~~~--~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~--~~~f~~~l~~~~~~~~i~~~ 103 (160)
.+|+|++.+++..++ +.++. -+..+|.. +.+.+..+++ .+.|.+ +|++. .++|.++++++++...++.+
T Consensus 97 ~~a~r~~~aa~~~g~~~~~~~~~alf~a~~~~-~~~i~~~~~L---~~~a~~-~Gl~~~d~~~~~~~~~s~~~~~~v~~~ 171 (226)
T 1r4w_A 97 VNAMRFLTAVSMEQPEMLEKVSRELWMRIWSR-DEDITESQNI---LSAAEK-AGMATAQAQHLLNKISTELVKSKLRET 171 (226)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTS-CCCCSSHHHH---HHHHHH-TTCCHHHHHHHHTTTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhChHHHHHHHHHHHHHHhcC-CCCCCCHHHH---HHHHHH-cCCCchhHHHHHHHcCCHHHHHHHHHH
Confidence 489999999998875 22333 33445543 3455555444 444444 49962 46889999999999999999
Q ss_pred HHHhhcCCccccceEEEC----CEEecCCCCCCCHHHHHHHHHHHh
Q 031378 104 FKFSATRGVYATPTFFVN----GFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffIN----G~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+.++++||+|||||+|| |+.+.|+.+ ++.+.+.|....
T Consensus 172 ~~~a~~~gv~G~Ptfvv~~~g~~~~~~G~~~---~~~l~~~l~~~~ 214 (226)
T 1r4w_A 172 TGAACKYGAFGLPTTVAHVDGKTYMLFGSDR---MELLAYLLGEKW 214 (226)
T ss_dssp HHHHHHTTCCSSCEEEEEETTEEEEEESTTC---HHHHHHHHTCCC
T ss_pred HHHHHHCCCCCCCEEEEeCCCCcCceeCCCc---HHHHHHHhcCcc
Confidence 999999999999999999 999998766 888888887543
No 22
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=99.25 E-value=1.1e-11 Score=95.11 Aligned_cols=114 Identities=18% Similarity=0.139 Sum_probs=80.2
Q ss_pred eeccCchhhhHHHHHHHHHhh-hh-----HHH-Hh-chhhhhcCCCCCCChHHHHHHHHHHHHhhcCC-ChhHHHHcccC
Q 031378 22 SYFRDKFVCFFLVVLYIKRRL-NC-----LLE-IV-QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGN-SYSSALESGFS 92 (160)
Q Consensus 22 ~~~~~~~~~~a~ra~~aar~~-~~-----~l~-~~-~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gl-d~~~~f~~~l~ 92 (160)
+.++.+ ..++.|+..+++.. +. +.+ +| .+..... .....-.+.|.+.+.+ +|+ | .++|+++++
T Consensus 60 ~~~~~~-~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~~~-----~~~~~~~~~L~~~a~~-~Gl~d-~~~~~~~~~ 131 (185)
T 3feu_A 60 ITFNQS-AHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGEG-----TTLTEQQEAYSKAFTS-RGLVS-PYDFNEEQR 131 (185)
T ss_dssp CCSSSH-HHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCCTT-----SCHHHHHHHHHHHHHT-TTCCC-GGGCCHHHH
T ss_pred ccCCcc-chHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhcc-----CCCCCCHHHHHHHHHH-cCCCC-HHHHHHHHH
Confidence 334443 36888899988764 42 333 33 2221100 0111123457777766 598 9 599999888
Q ss_pred ChhHHHHHHHHHHHhhcCCccccceEEECCEEe---cCCCCCCCHHHHHHHHHHHhhh
Q 031378 93 DRSTDLLTRVSFKFSATRGVYATPTFFVNGFSL---AGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 93 ~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~---~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
+ .....++.+.+.++++||+|||||+|||+.. +|+.+ ++++.++|+.++.+
T Consensus 132 ~-~~~~~v~~~~~~a~~~gv~GtPtfvvng~~~v~~~Ga~~---~e~~~~~i~~ll~k 185 (185)
T 3feu_A 132 D-TLIKKVDNAKMLSEKSGISSVPTFVVNGKYNVLIGGHDD---PKQIADTIRYLLEK 185 (185)
T ss_dssp H-HHHHHHHHHHHHHHHHTCCSSSEEEETTTEEECGGGCSS---HHHHHHHHHHHHTC
T ss_pred H-HHHHHHHHHHHHHHHcCCCccCEEEECCEEEEecCCCCC---HHHHHHHHHHHHhC
Confidence 7 7778999999999999999999999999964 57666 99999999998753
No 23
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=99.13 E-value=5.3e-10 Score=88.91 Aligned_cols=107 Identities=10% Similarity=0.096 Sum_probs=79.8
Q ss_pred hHHHHHHHHHhhhh--HHHHh--chhhhhcCCCCCCChHHHHHHHHHHHHhhcCCChh---HHHHcccCChhHHHHHHHH
Q 031378 31 FFLVVLYIKRRLNC--LLEIV--QQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYS---SALESGFSDRSTDLLTRVS 103 (160)
Q Consensus 31 ~a~ra~~aar~~~~--~l~~~--~Q~~f~~~~~~~~t~~~i~~~la~~A~~~~Gld~~---~~f~~~l~~~~~~~~i~~~ 103 (160)
+|+|++.+++..++ ..++. -+..||.. +.+.+..+++..++ .+ +|+| . +++.+.++++++.+.++.+
T Consensus 98 ~a~r~~~aa~~~~~~~~~~~~~al~~A~~~~-g~di~d~~~L~~~a---~~-~GLd-~~~~~~~l~~~~s~~~~~~l~~~ 171 (234)
T 3rpp_A 98 SAMRFLTAVNLEHPEMLEKASRELWMRVWSR-NEDITEPQSILAAA---EK-AGMS-AEQAQGLLEKIATPKVKNQLKET 171 (234)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHTS-CCCCSSHHHHHHHH---HH-TTCC-HHHHHHHHTTTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHcC-CCCCCCHHHHHHHH---HH-cCCC-HHHHHHHHHHccCHHHHHHHHHH
Confidence 89999999987754 33333 45666665 45666665554444 44 4999 5 5666777999999999999
Q ss_pred HHHhhcCCccccceEEEC--C--EEecCCCCCCCHHHHHHHHHHHhh
Q 031378 104 FKFSATRGVYATPTFFVN--G--FSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffIN--G--~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
.+.+++.||.|||||+|| | ..+.|... ++.+.+.|.....
T Consensus 172 ~~~a~~~Gv~GvPtfvv~~~g~~~~f~G~dr---l~~l~~~L~~~~~ 215 (234)
T 3rpp_A 172 TEAACRYGAFGLPITVAHVDGQTHMLFGSDR---MELLAHLLGEKWM 215 (234)
T ss_dssp HHHHHHTTCSSSCEEEEEETTEEEEEESSSC---HHHHHHHHTCCCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCcCceeCccC---HHHHHHHhccccC
Confidence 999999999999999995 7 57888666 8887777655443
No 24
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.80 E-value=5e-09 Score=78.34 Aligned_cols=60 Identities=13% Similarity=0.228 Sum_probs=45.6
Q ss_pred HHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 70 EIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 70 ~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.+.+.+++.+|++. + + ....++.+.+.++++||+|||||+|||+.+.|+.+ +++|.++|+
T Consensus 115 ~l~~~a~~~~Gld~-~------~---~~~~~~~~~~~a~~~gv~gtPt~vvng~~~~G~~~---~~~l~~~i~ 174 (175)
T 1z6m_A 115 EVATYAEKNLGLKE-Q------K---DATLVSAVIAEANAAHIQFVPTIIIGEYIFDESVT---EEELRGYIE 174 (175)
T ss_dssp HHHHHHHHTSCCCC-C------C---CHHHHHHHHHHHHHHTCCSSCEEEETTEEECTTCC---HHHHHHHHT
T ss_pred HHHHHHHHhcCCCc-c------c---CHHHHHHHHHHHHHcCCCCcCeEEECCEEccCCCC---HHHHHHHhc
Confidence 45566554469984 3 1 22345566788999999999999999999988665 999999886
No 25
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.74 E-value=3.3e-08 Score=76.78 Aligned_cols=55 Identities=18% Similarity=0.188 Sum_probs=47.3
Q ss_pred HHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHHhhcCCccccceEEECCEEecC
Q 031378 71 IVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFSATRGVYATPTFFVNGFSLAG 127 (160)
Q Consensus 71 la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~~g 127 (160)
|.+.+.+ +|+| .++|++++++.+....++.+.+.++.+||+|||||+|||+...+
T Consensus 9 L~~~a~~-~Gld-~~~~~~~l~s~~~~~~v~~~~~~a~~~gi~gvP~fvingk~~~~ 63 (197)
T 1un2_A 9 IRDVFIN-AGIK-GEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLN 63 (197)
T ss_dssp HHHHHHH-HTCC-HHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEEC
T ss_pred HHHHHHH-cCCC-HHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEEcceEecC
Confidence 4444545 4999 59999999999999999998889999999999999999997653
No 26
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.35 E-value=2.5e-07 Score=68.87 Aligned_cols=50 Identities=20% Similarity=0.216 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhcCCccccceEEE-CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 96 TDLLTRVSFKFSATRGVYATPTFFV-NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 96 ~~~~i~~~~k~a~~~GV~GTPTffI-NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.+..++.+.+.++++||+|||||+| ||+.+.|+.+ .++|.++|+..+...
T Consensus 91 ~~~~v~~~~~la~~~gI~gtPt~vi~nG~~i~G~~~---~~~l~~~i~~~~~~~ 141 (147)
T 3gv1_A 91 CDNPVAETTSLGEQFGFNGTPTLVFPNGRTQSGYSP---MPQLEEIIRKNQQEG 141 (147)
T ss_dssp CSCSHHHHHHHHHHTTCCSSCEEECTTSCEEESCCC---TTHHHHHHHHTSCC-
T ss_pred HHHHHHHHHHHHHHhCCCccCEEEEECCEEeeCCCC---HHHHHHHHHHHHHhc
Confidence 3456778889999999999999999 9999999766 999999999887543
No 27
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.97 E-value=3.8e-06 Score=65.30 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=37.3
Q ss_pred HHHHHHHHHhhcCCccccceEEE-CCEEecCCCCCCCHHHHHHHHHHH
Q 031378 98 LLTRVSFKFSATRGVYATPTFFV-NGFSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 98 ~~i~~~~k~a~~~GV~GTPTffI-NG~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
..+..+.+.++++||+|||||++ ||+.+.|+.+ .+++.++|++.
T Consensus 165 ~~v~~~~~l~~~~gV~gTPt~vi~nG~~~~G~~~---~~~l~~~l~~~ 209 (211)
T 1t3b_A 165 NIVKKHYELGIQFGVRGTPSIVTSTGELIGGYLK---PADLLRALEET 209 (211)
T ss_dssp SHHHHHHHHHHHHTCCSSCEEECTTSCCCCSCCC---HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCcCCEEEEeCCEEecCCCC---HHHHHHHHHhc
Confidence 45667788999999999999999 9998887655 99999988753
No 28
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.88 E-value=1e-05 Score=62.93 Aligned_cols=46 Identities=17% Similarity=0.230 Sum_probs=38.4
Q ss_pred HHHHHHHHhhcCCccccceEEE-CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 99 LTRVSFKFSATRGVYATPTFFV-NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffI-NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.+..+.+.++++||+||||+++ ||..+.|..+ .++|.++|+..++.
T Consensus 166 ~v~~~~~l~~~~gV~gtPt~v~~dG~~~~G~~~---~~~l~~~l~~~~~~ 212 (216)
T 1eej_A 166 DIADHYALGVQLGVSGTPAVVLSNGTLVPGYQP---PKEMKEFLDEHQKM 212 (216)
T ss_dssp CHHHHHHHHHHHTCCSSSEEECTTSCEEESCCC---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCccCEEEEcCCeEecCCCC---HHHHHHHHHHhhhh
Confidence 3555677899999999999999 8999988665 99999999987643
No 29
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.65 E-value=2.9e-05 Score=61.44 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=39.1
Q ss_pred ChhHHHHHHHHHHHhhcCCccccceEEEC---CE--EecCCCCCCCHHHHHHHHHHHhh
Q 031378 93 DRSTDLLTRVSFKFSATRGVYATPTFFVN---GF--SLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 93 ~~~~~~~i~~~~k~a~~~GV~GTPTffIN---G~--~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
+++....+..+.+.++++||+|||||+++ |+ .+.|+.+ .++|.++|++.+.
T Consensus 178 ~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~---~~~L~~~l~~~~~ 233 (241)
T 1v58_A 178 STEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPD---QKTLNIIMGNKLQ 233 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCC---HHHHHHHTTC---
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCC---HHHHHHHHHHHHH
Confidence 44566678888899999999999999996 54 4677555 9999998887664
No 30
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.38 E-value=0.0001 Score=47.44 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=31.2
Q ss_pred HHhhcCCccccceEEECCEE-ecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFVNGFS-LAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffING~~-~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++||+. +.|. .+.+++.+.|++.+
T Consensus 46 ~~~~~~~v~~~Pt~~~~G~~~~~G~---~~~~~l~~~l~~~l 84 (85)
T 1nho_A 46 EKAIEYGLMAVPAIAINGVVRFVGA---PSREELFEAINDEM 84 (85)
T ss_dssp GGGGGTCSSCSSEEEETTTEEEECS---SCCHHHHHHHHHHC
T ss_pred HHHHhCCceeeCEEEECCEEEEccC---CCHHHHHHHHHHHh
Confidence 45789999999999999996 5564 34899999998765
No 31
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.34 E-value=0.00015 Score=46.59 Aligned_cols=38 Identities=24% Similarity=0.328 Sum_probs=30.6
Q ss_pred HHhhcCCccccceEEECCEE-ecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFVNGFS-LAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffING~~-~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++||+. +.| ..+.+++.+.|++.+
T Consensus 47 ~~~~~~~v~~~Pt~~~~G~~~~~G---~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 47 QKAMEYGIMAVPTIVINGDVEFIG---APTKEALVEAIKKRL 85 (85)
T ss_dssp CTTTSTTTCCSSEEEETTEEECCS---SSSSHHHHHHHHHHC
T ss_pred HHHHHCCCcccCEEEECCEEeeec---CCCHHHHHHHHHHhC
Confidence 35788999999999999997 445 345899999998764
No 32
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.05 E-value=0.00061 Score=47.20 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=29.2
Q ss_pred HHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 105 k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
..+++.||.|+||++|||+.+.|..+ .+++.+++.
T Consensus 57 ~l~~~~~V~~~PT~~i~G~~~~G~~~---~~~l~~~~~ 91 (106)
T 3kp8_A 57 QECTEAGITSYPTWIINGRTYTGVRS---LEALAVASG 91 (106)
T ss_dssp HHHHHTTCCSSSEEEETTEEEESCCC---HHHHHHHHT
T ss_pred HHHHHcCCeEeCEEEECCEEecCCCC---HHHHHHHhC
Confidence 34678999999999999999988555 888888765
No 33
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.88 E-value=0.00093 Score=43.90 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=32.8
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..+++.||.++||+++ ||+.+....+..+.+++.+.|+..+.
T Consensus 60 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 60 DIAARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp HHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHhCCccccCEEEEEECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 3567899999999999 99986422335569999999998874
No 34
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.86 E-value=0.00085 Score=44.91 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=31.3
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+++.||.|+||+++ ||+.+....+..+.+++.++|++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 66 TAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHcCCcccCEEEEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 467889999999999 9998532223556999999998876
No 35
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=96.82 E-value=0.001 Score=44.77 Aligned_cols=43 Identities=12% Similarity=0.099 Sum_probs=33.1
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..+++.||.++||+++ ||+.+....+..+.+++.++|++.+..
T Consensus 70 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 70 TTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCceeEEEEEcCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 3567899999999999 999764223345699999999988754
No 36
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.77 E-value=0.0009 Score=42.29 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=26.2
Q ss_pred HHhhcCCccccceEEECCEEecCCCCCC-CHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFVNGFSLAGAGSPL-DYNGWRKVI 141 (160)
Q Consensus 105 k~a~~~GV~GTPTffING~~~~ga~s~~-~~e~~~~~I 141 (160)
+.+++.||.|+||+++||+.+.. +.. +.+++.++|
T Consensus 41 ~~~~~~~v~~~Pt~~~~G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 41 DQILEAGLTALPGLAVDGELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp HHHHHHTCSSSSCEEETTEEEEC--SSCCCHHHHHHHC
T ss_pred HHHHHCCCCcCCEEEECCEEEEc--CCCCCHHHHHHHh
Confidence 45678899999999999998642 233 578877654
No 37
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.76 E-value=0.00092 Score=44.32 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=31.3
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.|+||+++ ||+.+....+..+.+++.+.|++.+
T Consensus 63 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 63 GIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred HHHHhCCCCcccEEEEEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 3567899999999999 9987542233455899999998764
No 38
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.75 E-value=0.00099 Score=44.96 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=32.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..++++||.|+||+++ ||+.+....+..+.+++.+.|++.+.
T Consensus 68 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 68 GTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred HHHHhCCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 3567899999999998 99885322234558999999988764
No 39
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.69 E-value=0.0016 Score=43.63 Aligned_cols=42 Identities=10% Similarity=0.150 Sum_probs=33.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..++++||.++||+++ ||+.+....+..+.+++.+.|++.+.
T Consensus 67 ~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 67 TLFQRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp HHHHHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred hHHHhcCCCcCCEEEEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 4577899999999988 99876433345569999999998764
No 40
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.65 E-value=0.00089 Score=44.74 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=30.6
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.+.|++++
T Consensus 64 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 64 NVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp HHHHHHTCCSSCEEEEESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHHCCCCcCCEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 3467789999999998 8887432223455899999998875
No 41
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.64 E-value=0.0016 Score=43.33 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=31.8
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.+.|++.+
T Consensus 66 ~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 66 KIADKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHhcCcccCCEEEEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 3467889999999777 9987643334556999999998875
No 42
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=96.61 E-value=0.0021 Score=44.47 Aligned_cols=44 Identities=11% Similarity=0.123 Sum_probs=34.1
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..++++||.|+||+++ ||+.+....+..+.+++.++|+..+...
T Consensus 73 ~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 73 DLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp HHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred HHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 4577899999999999 8987532223556999999999988655
No 43
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.61 E-value=0.0023 Score=45.68 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=35.6
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..++++||.|+||+++ ||+.+....+..+.+++.++|+..+.+.
T Consensus 100 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 145 (148)
T 3p2a_A 100 ALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHSC
T ss_pred HHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 4577899999999988 9987653344666999999999998765
No 44
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.61 E-value=0.0018 Score=44.70 Aligned_cols=41 Identities=20% Similarity=0.195 Sum_probs=31.9
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.++||+++ ||+.+....+..+.+++.++|++++
T Consensus 76 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 76 DLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 4577899999999999 9987532223456899999998876
No 45
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.61 E-value=0.0024 Score=46.47 Aligned_cols=45 Identities=9% Similarity=0.073 Sum_probs=31.7
Q ss_pred HHHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 104 FKFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
-..+++.||.|+||+++ ||+.+.-..+..+.+++.+.|++.+...
T Consensus 81 ~~la~~~~V~~iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 81 EAIGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp HHHHHTTTCCSSSEEEEESCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred HHHHHhcCCCcCCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 34678999999999999 9987653334556899999999998654
No 46
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=96.61 E-value=0.0015 Score=43.44 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=30.5
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
..+++.||.++||+++ ||+.+....+..+.+++.++|++.
T Consensus 65 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 65 ETPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred HHHHhcCCCccCEEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 3567899999999999 999864222345589999988765
No 47
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.58 E-value=0.0014 Score=44.09 Aligned_cols=41 Identities=17% Similarity=0.311 Sum_probs=31.2
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..++++||.|+||+++ ||+.+....+. +.+++.++|++.+.
T Consensus 69 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 69 AVAEAAGITAMPTFHVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp HHHHHHTCCBSSEEEEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred HHHHHcCCCcccEEEEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 3467789999999998 99875422223 68999999998764
No 48
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.55 E-value=0.002 Score=45.57 Aligned_cols=43 Identities=21% Similarity=0.253 Sum_probs=33.4
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||.++||+++ ||+.+....+..+.+++.++|+..+.+
T Consensus 95 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 95 GLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 3567889999999999 999853222345599999999998864
No 49
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=96.55 E-value=0.00092 Score=44.52 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=30.5
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.+.|++++
T Consensus 62 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 62 ETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred HHHHHcCCccccEEEEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 3567899999999999 9987532223455888888887654
No 50
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.52 E-value=0.0014 Score=43.46 Aligned_cols=43 Identities=16% Similarity=0.194 Sum_probs=31.8
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||.++||+++ ||+.+....+..+.+++.+.|+..+..
T Consensus 63 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 63 KTAMRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred hHHHhCCCCcCCEEEEEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 3577899999999999 999753222345589999999887643
No 51
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=96.52 E-value=0.0014 Score=43.39 Aligned_cols=39 Identities=21% Similarity=0.212 Sum_probs=30.3
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
.++++||.|+||+++ ||+.+....+..+.+++.+.|++.
T Consensus 65 ~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 65 TAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp HHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHhCCCcccCEEEEEeCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 467899999999988 998764333455689999988765
No 52
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.52 E-value=0.0024 Score=45.20 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=34.7
Q ss_pred HHHHHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 102 VSFKFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 102 ~~~k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
.....++++||.|+||+++ ||+.+....+..+.+.+.++|+.++.+..+
T Consensus 80 ~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~~~ 130 (135)
T 3emx_A 80 AARLEMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGEGH 130 (135)
T ss_dssp HHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC-----
T ss_pred hhHHHHHHcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCCcc
Confidence 3455688899999999999 898764333455599999999999877644
No 53
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.48 E-value=0.0023 Score=44.99 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=32.5
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..+++.||.++||+++ ||+.+....+ .+.+++.++|+..+.+
T Consensus 81 ~l~~~~~v~~~Pt~~i~~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 81 EIVSKCRVLQLPTFIIARSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCcccEEEEEeCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 3567899999999999 9997642222 4579999999988764
No 54
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.41 E-value=0.0021 Score=42.53 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=29.9
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+ .+.+++.++|++.+
T Consensus 65 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 65 DIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred HHHHHcCCCcccEEEEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 3567899999999998 9987643223 45788888887653
No 55
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.40 E-value=0.0022 Score=45.64 Aligned_cols=44 Identities=18% Similarity=0.173 Sum_probs=34.4
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..++++||.|+||+++ ||+.+....+..+.+++.+.|++.+...
T Consensus 69 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 114 (140)
T 3hz4_A 69 WTAEKYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQHG 114 (140)
T ss_dssp HHHHHHTCCEESEEEEEETTEEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHCCCCcCCEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhccc
Confidence 3466789999999999 9988653334566999999999998543
No 56
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.39 E-value=0.0026 Score=42.08 Aligned_cols=40 Identities=18% Similarity=0.285 Sum_probs=31.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+. +.+++.+.|++.|
T Consensus 64 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 64 DVASESEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp HHHHHTTCCBSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred HHHHHcCCCcCcEEEEEECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 3567889999999999 89886433334 6899999998764
No 57
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=96.39 E-value=0.0021 Score=43.78 Aligned_cols=43 Identities=19% Similarity=0.263 Sum_probs=33.1
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.+++.||.|+||+++ ||+.+....+..+.+++.++++..+...
T Consensus 63 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 63 TAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp HHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred HHHHcCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 467889999999999 9998542333556999999998776554
No 58
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.38 E-value=0.0027 Score=43.45 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=31.9
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||.|+||+++ ||+.+....+.. .+++.++|++.+.+
T Consensus 78 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 78 PIAEQFSVEAMPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred HHHHHcCCCcccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 3567899999999999 998754222344 88899999888753
No 59
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.36 E-value=0.0023 Score=45.12 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=32.2
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.|+||+++ ||+.+....+..+.+++.++|++.+
T Consensus 85 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 85 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp TTSGGGTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCccCEEEEEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 3578899999999999 9997532233556999999998876
No 60
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.25 E-value=0.0035 Score=41.29 Aligned_cols=39 Identities=23% Similarity=0.234 Sum_probs=29.7
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+++.||.++||+++ ||+.+....+ .+.+++.++|++.+
T Consensus 64 ~~~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 64 AAAKYSVTAMPTFVFIKDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred HHHHcCCccccEEEEEeCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 467889999999998 8988642222 46888999888753
No 61
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.25 E-value=0.0012 Score=45.07 Aligned_cols=42 Identities=10% Similarity=0.143 Sum_probs=31.4
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..++++||.++||+++ ||+.+....+..+.+++.++|++.+.
T Consensus 75 ~~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 75 ETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred HHHHhcCCCcCCEEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 3567899999999999 99885322335558899988887654
No 62
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.25 E-value=0.0031 Score=44.70 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=32.5
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCc
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREV 154 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~ 154 (160)
.++.+||.++||++| ||+.+....+..+.+++.+.|+.++.+...+.+.
T Consensus 95 ~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~~~~~~ 146 (151)
T 2f9s_A 95 VLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETSGLEH 146 (151)
T ss_dssp HHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-------
T ss_pred HHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhhccccc
Confidence 356789999999655 7887653333556999999999999766554333
No 63
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.24 E-value=0.0024 Score=43.38 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=30.3
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.++||+++ ||+.+....+. +.+++.++|++++
T Consensus 70 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 70 EVTEKENITSMPTFKVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred HHHHHcCCCcccEEEEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 4567899999999999 99885422223 6899999888654
No 64
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.23 E-value=0.0035 Score=42.76 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=29.9
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+ .+.+++.+.|++.+
T Consensus 76 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 76 ETARKYNISAMPTFIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred HHHHHcCCCccceEEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 3567899999999999 9988642222 45788888888753
No 65
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.20 E-value=0.0038 Score=44.57 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=34.3
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.+.+.+|.|||||++ ||+.+.-..+..+.++|.+.++..+.+-
T Consensus 68 la~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~~~f~~~L~~~l~~~ 112 (116)
T 3dml_A 68 LELARPVTFTPTFVLMAGDVESGRLEGYPGEDFFWPMLARLIGQA 112 (116)
T ss_dssp CBCSSCCCSSSEEEEEETTEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCEEEEEECCEEEeeecCCCCHHHHHHHHHHHHhhc
Confidence 467889999999999 9988754444555999999999987654
No 66
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.19 E-value=0.0039 Score=42.87 Aligned_cols=38 Identities=18% Similarity=0.409 Sum_probs=29.2
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDP 143 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~ 143 (160)
..+++.||.|+|||++ ||+.+.... +.+.+++.++|++
T Consensus 64 ~l~~~~~V~~~PT~~~~~~G~~v~~~~-G~~~~~l~~~i~k 103 (105)
T 3zzx_A 64 DIAQDNQIACMPTFLFMKNGQKLDSLS-GANYDKLLELVEK 103 (105)
T ss_dssp HHHHHTTCCBSSEEEEEETTEEEEEEE-SCCHHHHHHHHHH
T ss_pred HHHHHcCCCeecEEEEEECCEEEEEEe-CcCHHHHHHHHHh
Confidence 3578899999999988 999875322 2467888888875
No 67
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.18 E-value=0.004 Score=45.43 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=33.1
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||.++||+++ ||+.+....+..+.+++.++|++.+.+
T Consensus 109 ~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 109 AVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 3578899999999998 999853222345699999999998864
No 68
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.18 E-value=0.0072 Score=42.63 Aligned_cols=46 Identities=15% Similarity=0.212 Sum_probs=36.9
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
..++.+||.++|+++| ||+.+....+..+.+++.++|+..+...++
T Consensus 99 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 99 TFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp HHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCCSS
T ss_pred hHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccccc
Confidence 3456789999999988 798876555567789999999999887754
No 69
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.14 E-value=0.0049 Score=45.46 Aligned_cols=46 Identities=13% Similarity=0.129 Sum_probs=35.3
Q ss_pred HHHHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 103 SFKFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 103 ~~k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.-..|.+.||.|.||+++ ||+.+.-..+..+.+++.+.|++.+...
T Consensus 80 ~~~lA~~ygV~sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 80 SEAIGDRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp HHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred CHHHHHHcCCccCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHhcCC
Confidence 456789999999999999 9998753333444899999999988544
No 70
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.13 E-value=0.0063 Score=40.51 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=30.8
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
.++++||.++||+++ ||+.+....+..+.+++.++|++.
T Consensus 70 l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 70 ICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred HHHhcCCCcccEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 577899999999998 998765444566799999888753
No 71
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.13 E-value=0.0039 Score=43.55 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=30.6
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.|+||+++ ||+.+....+ .+.+++.+.|++.+
T Consensus 82 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 82 SVASDWAIQAMPTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 4577899999999999 9998642222 35889999988765
No 72
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.12 E-value=0.0038 Score=44.16 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=35.9
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCC
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKRE 153 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~ 153 (160)
.++.+||.++|++++ ||+.+....+..+.+++.+.|+.++.+...++.
T Consensus 98 ~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~~~~~ 148 (153)
T 2l5o_A 98 VGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSDAEGH 148 (153)
T ss_dssp HHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCSSCCT
T ss_pred HHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhhhccc
Confidence 356679999999987 788743222355699999999999987765443
No 73
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.11 E-value=0.0049 Score=41.61 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=31.8
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||.|+||+++ ||+.+....+ .+.+++.+.|++.+..
T Consensus 72 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 72 DVAEAYNVEAMPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp HHHHHTTCCSBSEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCcCcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 3567899999999999 9998642222 4589999999988754
No 74
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.10 E-value=0.01 Score=41.50 Aligned_cols=44 Identities=9% Similarity=0.046 Sum_probs=35.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
..++++||.++||+++ ||+.. ...+..+.+++.++|+..+....
T Consensus 82 ~~~~~~~v~~~Pt~~~~~~G~~~-~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 82 MLASKFDVSGYPTIKILKKGQAV-DYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEE-ECCSCCCHHHHHHHHHHHHSSSC
T ss_pred HHHHHCCCCccCeEEEEECCcEE-EcCCCCCHHHHHHHHHHhcCCCC
Confidence 4577899999999999 99844 33456779999999999986553
No 75
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.09 E-value=0.0024 Score=42.83 Aligned_cols=41 Identities=15% Similarity=0.306 Sum_probs=25.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.+.|++.+
T Consensus 62 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 62 EIAGRYAVFTGPTVLLFYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp --------CCCCEEEEEETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred HHHHhcCCCCCCEEEEEeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 4567889999999988 9988742223455999999988654
No 76
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.09 E-value=0.0073 Score=40.62 Aligned_cols=42 Identities=17% Similarity=0.256 Sum_probs=31.3
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..+++.||.|+||+++ ||+.+....+ ...+++.+.|++.+..
T Consensus 67 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~~~~ 110 (112)
T 3d6i_A 67 EISELFEISAVPYFIIIHKGTILKELSG-ADPKEYVSLLEDCKNS 110 (112)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEECS-CCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEEECCEEEEEecC-CCHHHHHHHHHHHHhh
Confidence 4577899999999988 9998642222 2456799999888754
No 77
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.07 E-value=0.0077 Score=41.57 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=34.2
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..++++||.|+||+++ +|+.+....+..+.+++.++|+..+...
T Consensus 74 ~l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 74 VLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp HHHHHHTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCeeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 3567789999999998 7876543334567999999999998764
No 78
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.07 E-value=0.0037 Score=43.02 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=30.7
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.|+||+++ ||+.+....+. +.+++.+.|++++
T Consensus 75 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 75 DVASECEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp HHHHHTTCCSSSEEEEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred HHHHHcCCccccEEEEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 4578889999999999 88776433334 6899999998764
No 79
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.05 E-value=0.0019 Score=45.23 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=31.2
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.+.|++.+
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 3578999999999998 9987532233455899999988654
No 80
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.05 E-value=0.0049 Score=42.94 Aligned_cols=43 Identities=14% Similarity=0.148 Sum_probs=33.4
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.++||+++ ||+.+....+..+.+++.+.|+.++.+.
T Consensus 102 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 147 (148)
T 2b5x_A 102 LTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAET 147 (148)
T ss_dssp HHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTTC
T ss_pred HHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhcc
Confidence 467789999999988 8987652223456899999999998754
No 81
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.04 E-value=0.0038 Score=43.20 Aligned_cols=39 Identities=23% Similarity=0.303 Sum_probs=29.8
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+++.||.++||+++ ||+.+....+. +.+++.++|++.+
T Consensus 80 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 80 IAQEVGIRAMPTFVFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp HHHHHTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred HHHHcCCCcccEEEEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 467789999999998 89875322223 6899999998875
No 82
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.03 E-value=0.0057 Score=42.28 Aligned_cols=45 Identities=20% Similarity=0.182 Sum_probs=34.3
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.+.|+..+.+.+
T Consensus 77 ~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 124 (130)
T 2kuc_A 77 ELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESEG 124 (130)
T ss_dssp HHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCCC
T ss_pred HHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhcc
Confidence 4578899999999998 78775322234558999999999887663
No 83
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.00 E-value=0.003 Score=42.95 Aligned_cols=41 Identities=10% Similarity=0.106 Sum_probs=30.4
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
.+++.||.|+||+++ ||+.+....+..+.+++.+.|+....
T Consensus 64 l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 64 LMKELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp HHHHTTCCSSCEEEEEESSSEEEEEESCCCHHHHHHHHHTC--
T ss_pred HHHHcCCcccCEEEEEECCEEEEEEcCCCCHHHHHHHHHHHhh
Confidence 567889999999999 99987622234558999888876654
No 84
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=95.99 E-value=0.0087 Score=43.36 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=34.2
Q ss_pred HHHHhhcCCccccceEEE---CCEEecCCCCCC--CHHHHHHHHHHHhhh
Q 031378 103 SFKFSATRGVYATPTFFV---NGFSLAGAGSPL--DYNGWRKVIDPLLSE 147 (160)
Q Consensus 103 ~~k~a~~~GV~GTPTffI---NG~~~~ga~s~~--~~e~~~~~Id~~l~~ 147 (160)
....++++||.|+||+++ ||+.+... +.. +.+++.+.|+.++++
T Consensus 105 ~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 105 NQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHhc
Confidence 345678899999999988 78876522 333 699999999998864
No 85
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.97 E-value=0.0086 Score=40.89 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=29.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id 142 (160)
..++++||.|+||+++ ||+.+....+..+.+++.++|+
T Consensus 78 ~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 78 AFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHTCCSSCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred HHHHHcCCCCCCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 4578899999999987 8987644444566888888774
No 86
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=95.94 E-value=0.0033 Score=42.20 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=30.1
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
.++++||.++||+++ ||+.+....+ .+.+++.++|++.+.
T Consensus 71 ~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 71 VAEEWNVEAMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp HHHHHHCSSTTEEEEEETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred HHHhCCCCcccEEEEEeCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 456779999999999 9997532222 457899999988764
No 87
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=95.93 E-value=0.0075 Score=42.89 Aligned_cols=43 Identities=21% Similarity=0.081 Sum_probs=33.1
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++.+||.|+|+++| ||+.+.-..+..+.+++.+.|+.++.+.
T Consensus 109 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 109 TMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp HHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTSC
T ss_pred HHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhccC
Confidence 467789999997776 7887643333556999999999999765
No 88
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.92 E-value=0.0013 Score=43.38 Aligned_cols=41 Identities=22% Similarity=0.298 Sum_probs=30.8
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.++||+++ ||+.+....+..+.+++.+.|++++
T Consensus 64 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 64 NTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 4578899999999999 8987643344555788888877653
No 89
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=95.91 E-value=0.0025 Score=42.95 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=31.1
Q ss_pred HHhhcCCccccceEEE--CCEEe--cCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSL--AGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~--~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..+++.||.|+||+++ ||+.+ ....+..+.+++.++|++.+.
T Consensus 72 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 72 DLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp SSHHHHTCCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred HHHHHCCCCcccEEEEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 3456789999999999 88654 223346669999999987664
No 90
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=95.89 E-value=0.0093 Score=46.83 Aligned_cols=42 Identities=14% Similarity=0.283 Sum_probs=33.6
Q ss_pred HhhcCCccccceEEECCEEe-cCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 106 FSATRGVYATPTFFVNGFSL-AGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~-~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
.+.+.||.|+||+++||+.+ .| ..+.+++.+.|++.+...+.
T Consensus 188 ~~~~~~V~~vPt~~i~G~~~~~G---~~~~~~l~~~l~~~~~~~~~ 230 (243)
T 2hls_A 188 IADKYGVMSVPSIAINGYLVFVG---VPYEEDFLDYVKSAAEGRLT 230 (243)
T ss_dssp HHHHTTCCSSSEEEETTEEEEES---CCCHHHHHHHHHHHHTTCCC
T ss_pred HHHHcCCeeeCeEEECCEEEEeC---CCCHHHHHHHHHHHhhcccc
Confidence 46778999999999999864 34 45599999999999866543
No 91
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=95.88 E-value=0.0096 Score=38.22 Aligned_cols=33 Identities=24% Similarity=0.478 Sum_probs=25.6
Q ss_pred hhcCC--ccccceEEECCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 107 SATRG--VYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 107 a~~~G--V~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
++..| +.++|++++||+.+.| .+++.+++++-+
T Consensus 49 ~~~~~~~~~~vP~i~~~g~~i~~------~~~l~~~~~~~~ 83 (85)
T 1ego_A 49 QQKAGKPVETVPQIFVDQQHIGG------YTDFAAWVKENL 83 (85)
T ss_dssp HHHTCCCSCCSCEEEETTEEEES------SHHHHHHHHHHH
T ss_pred HHHhCCCCceeCeEEECCEEEEC------HHHHHHHHHHhc
Confidence 44455 9999999999999854 578888877654
No 92
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=95.87 E-value=0.0064 Score=41.19 Aligned_cols=40 Identities=20% Similarity=0.250 Sum_probs=29.8
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||.|+||+++ ||+.+....+. +.+++.++|++.+
T Consensus 68 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 68 DVAQKNEVSAMPTLLLFKNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 3577899999999998 99876522222 4688998888753
No 93
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=95.86 E-value=0.0058 Score=41.79 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=30.3
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
.++.+||.|+|++++ ||+.+ ...+..+.+++.+.|++++.
T Consensus 93 ~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 93 VWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred HHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 456789999999988 89884 22234559999999998874
No 94
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=95.83 E-value=0.0077 Score=42.26 Aligned_cols=43 Identities=30% Similarity=0.418 Sum_probs=33.1
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..++++||.|+||+++ ||+.+....+. +.+++.++|+..+...
T Consensus 90 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 90 DFSASWEIKATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp HHHHHTTCCEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred HHHHHcCCCcccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 4578899999999988 89876422223 5899999999988654
No 95
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=95.82 E-value=0.0053 Score=42.18 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=29.2
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||+|+||+++ ||+.+....+ ...+++.+.|++++
T Consensus 82 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~i~~~~ 123 (124)
T 1faa_A 82 TLAKELGIRVVPTFKILKENSVVGEVTG-AKYDKLLEAIQAAR 123 (124)
T ss_dssp HHHHHHCCSSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHT
T ss_pred HHHHHcCCCeeeEEEEEeCCcEEEEEcC-CCHHHHHHHHHHhh
Confidence 3467789999999988 9988632222 23788888888764
No 96
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=95.71 E-value=0.0074 Score=42.00 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=30.6
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDP 143 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~ 143 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.+.|++
T Consensus 87 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 87 SLARKFSVKSLPTIILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred HHHHHcCCCCcCEEEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 4578899999999999 99887544445668998888763
No 97
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.71 E-value=0.0071 Score=42.75 Aligned_cols=42 Identities=21% Similarity=0.223 Sum_probs=30.7
Q ss_pred HhhcCCccccceEEE----CCE--EecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV----NGF--SLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI----NG~--~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.|+||+++ ||+ .+....+. +.+++.+.|++++..+
T Consensus 84 l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~~ 131 (133)
T 3cxg_A 84 LNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLEK 131 (133)
T ss_dssp HHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEEC
T ss_pred HHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHhh
Confidence 467899999999977 898 33211112 5899999999987654
No 98
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=95.69 E-value=0.0053 Score=43.14 Aligned_cols=42 Identities=19% Similarity=0.305 Sum_probs=31.7
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||.|+||+++ ||+... ..+..+.+++.++|+.++.+
T Consensus 96 ~~~~~~~v~~~Pt~~~~~~~g~~~~-~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 96 ELARDFGIQSIPTIWFVPMKGEPQV-NMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp HHHHHTTCCSSSEEEEECSSSCCEE-EESCCCHHHHHHHHHHTTC-
T ss_pred HHHHHcCCCCcCEEEEEeCCCCEEE-EeCCCCHHHHHHHHHHHHcc
Confidence 4578899999999998 676442 23355699999999998764
No 99
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.67 E-value=0.0086 Score=42.59 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=32.8
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.|+|++++ ||+.+....+..+.+++.+.|+.+++++
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 157 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSET 157 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTCC
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhcc
Confidence 456789999997777 6887643333556999999999999764
No 100
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.62 E-value=0.012 Score=40.57 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=33.7
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.+++.||.++||+++ ||++.. ..+..+.+++.++|++.+.+.
T Consensus 69 ~~~~~~v~~~Pt~~~~~~G~~~~-~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 69 LSGRFIINALPTIYHCKDGEFRR-YQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEE-CCSCCCHHHHHHHHHTCGGGG
T ss_pred HHHHcCCcccCEEEEEeCCeEEE-eecCCCHHHHHHHHHHHhhcc
Confidence 577899999999999 998643 344667999999999888655
No 101
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=95.60 E-value=0.0063 Score=40.95 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=28.9
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.|+||+++ ||+.+.... +...+++.++|++++
T Consensus 69 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~-G~~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 69 TLAKELGIRVVPTFKILKENSVVGEVT-GAKYDKLLEAIQAAR 110 (111)
T ss_dssp HHHHHHCCSBSSEEEEESSSSEEEEEE-SSCHHHHHHHHHHHH
T ss_pred HHHHHcCCCeeeEEEEEeCCcEEEEEc-CCCHHHHHHHHHHhh
Confidence 4567789999999888 888753222 224788888888765
No 102
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=95.55 E-value=0.036 Score=39.07 Aligned_cols=69 Identities=10% Similarity=0.037 Sum_probs=45.0
Q ss_pred HHHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 70 EIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 70 ~la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
..++..++. |++ +++| +--+++..-..-..-.+.-.+.|+.++|..+|||+.+. ...+.+.+++.+++.
T Consensus 34 ~~~~~lk~~-Gi~-V~Ry-NL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~VDGevv~-~G~yPt~eEl~~~lg 102 (106)
T 3ktb_A 34 VVIESLKKQ-GII-VTRH-NLRDEPQVYVSNKTVNDFLQKHGADALPITLVDGEIAV-SQTYPTTKQMSEWTG 102 (106)
T ss_dssp HHHHHHHHT-TCC-CEEE-ETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEETTEEEE-CSSCCCHHHHHHHHC
T ss_pred HHHHHHHHC-CCE-EEEE-ccccChHHHhcCHHHHHHHHHcCcccCCEEEECCEEEE-eccCCCHHHHHHHhC
Confidence 345555554 877 5655 33344443333222344567899999999999999984 345778999988763
No 103
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=95.50 E-value=0.0092 Score=45.51 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=32.8
Q ss_pred HHhhcCCccccceEEECCEE--ecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFVNGFS--LAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffING~~--~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..+++.||.|+||+++||+. +.| ..+.+++.+.|+..+.+.
T Consensus 180 ~l~~~~~v~~~Pt~~~~G~~~~~~G---~~~~~~l~~~l~~~~~~~ 222 (229)
T 2ywm_A 180 DLAEQFQVVGVPKIVINKGVAEFVG---AQPENAFLGYIMAVYEKL 222 (229)
T ss_dssp HHHHHTTCCSSSEEEEGGGTEEEES---CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcccCEEEECCEEEEeeC---CCCHHHHHHHHHHHhhhh
Confidence 35778999999999999985 345 455999999999888543
No 104
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=94.49 E-value=0.0023 Score=44.40 Aligned_cols=47 Identities=17% Similarity=0.143 Sum_probs=34.9
Q ss_pred HHHhhcCCccccceEEE----CCEE--ecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 104 FKFSATRGVYATPTFFV----NGFS--LAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI----NG~~--~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
...++++||.|+||+++ ||+. +....+..+.+++.+.|+.++.+...
T Consensus 68 ~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 120 (130)
T 2lst_A 68 QELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKGGA 120 (130)
Confidence 34678899999999988 5887 33233345588999999999876644
No 105
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=95.44 E-value=0.011 Score=48.61 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=29.8
Q ss_pred HHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 104 FKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.+.+++.||+|.||+++||+.+.|..+ .+++.++++
T Consensus 241 ~~la~~~gI~~vPT~~i~G~~~~G~~~---~~~L~~~l~ 276 (291)
T 3kp9_A 241 AQECTEAGITSYPTWIINGRTYTGVRS---LEALAVASG 276 (291)
T ss_dssp CHHHHTTTCCSTTEEEETTEEEESCCC---HHHHHHHTC
T ss_pred HHHHHHcCCcccCeEEECCEEecCCCC---HHHHHHHHC
Confidence 345789999999999999999988665 888777764
No 106
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=95.41 E-value=0.01 Score=41.71 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=33.7
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
..++++||.++||+++ ||+.+. ..+..+.+++.++|++.+...+
T Consensus 83 ~l~~~~~v~~~Pt~~~~~~~G~~~~-~~G~~~~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 83 ELAGAFGIRSIPSILFIPMEGKPEM-AQGAMPKASFKKAIDEFLLKKE 129 (136)
T ss_dssp HHHHHTTCCSSCEEEEECSSSCCEE-EESCCCHHHHHHHHHHHHTSCT
T ss_pred HHHHHcCCCCCCEEEEECCCCcEEE-EeCCCCHHHHHHHHHHHhhccC
Confidence 3567889999999987 787742 2335669999999999886653
No 107
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.35 E-value=0.013 Score=41.41 Aligned_cols=46 Identities=15% Similarity=0.032 Sum_probs=33.8
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
..++.+||.++|++++ ||+.+....+..+.+++.+.|++.+...++
T Consensus 100 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 148 (154)
T 3ia1_A 100 EVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLEG 148 (154)
T ss_dssp HHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC--
T ss_pred HHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcccc
Confidence 4578899999999554 788764333456699999999999866643
No 108
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.35 E-value=0.018 Score=37.06 Aligned_cols=32 Identities=19% Similarity=0.486 Sum_probs=25.9
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
++.++|+++|||+.+.| ++++.+++++.+.+|
T Consensus 58 ~~~~vP~i~i~g~~i~g------~~~i~~~~~~~~~~~ 89 (89)
T 3msz_A 58 PISTVPQIFIDDEHIGG------FTELKANADKILNKK 89 (89)
T ss_dssp CCCSSCEEEETTEEEES------HHHHHHTHHHHTTC-
T ss_pred CCCccCEEEECCEEEeC------hHHHHHHHHHHhcCC
Confidence 44999999999998854 899999888877643
No 109
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=95.34 E-value=0.01 Score=43.60 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=34.5
Q ss_pred HHHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 104 FKFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
-..+++.||.+.||+++ ||+.+.-..+..+.+++.+.|++.+..
T Consensus 79 ~~la~~ygV~siPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l~~ 124 (137)
T 2qsi_A 79 RGLMARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp HHHHHHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 45689999999999999 999975333344488999999988743
No 110
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.32 E-value=0.018 Score=41.71 Aligned_cols=43 Identities=9% Similarity=0.112 Sum_probs=33.3
Q ss_pred HhhcCCccccceEEE--CCEEe---------cCCCC-CCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV--NGFSL---------AGAGS-PLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~---------~ga~s-~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.|+||+++ ||+.+ ....+ ..+.+++.+.|+.++.+.
T Consensus 69 l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 69 YTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCccCeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHh
Confidence 577899999999988 89887 43333 456899999999997443
No 111
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=95.26 E-value=0.017 Score=38.54 Aligned_cols=39 Identities=31% Similarity=0.325 Sum_probs=27.9
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+++.||.|+||+++ ||+.+....+ ...+++.+.|++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 66 TAATNNISATPTFQFFRNKVRIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred HHHhcCCCcccEEEEEECCeEEEEEeC-CCHHHHHHHHHHhc
Confidence 567899999999988 8987642222 33466888887765
No 112
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=95.25 E-value=0.01 Score=43.34 Aligned_cols=42 Identities=14% Similarity=0.178 Sum_probs=34.0
Q ss_pred hhcCCccccceEEE---CCEEecCCCCCCC-HHHHHHHHHHHhhhc
Q 031378 107 SATRGVYATPTFFV---NGFSLAGAGSPLD-YNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV~GTPTffI---NG~~~~ga~s~~~-~e~~~~~Id~~l~~~ 148 (160)
+++.||.|+||+++ ||+.+....+..+ .+++.+.|++.+.+-
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~~ 168 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENY 168 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHHh
Confidence 57889999999877 7988765555666 999999999988653
No 113
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.22 E-value=0.02 Score=40.16 Aligned_cols=41 Identities=15% Similarity=0.153 Sum_probs=30.7
Q ss_pred HHHhhcCCccccceEEE---CCEEe--cCCCCCCCHHHHHHHHHHH
Q 031378 104 FKFSATRGVYATPTFFV---NGFSL--AGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI---NG~~~--~ga~s~~~~e~~~~~Id~~ 144 (160)
...++++||.|+||+++ ||+.+ ....+..+.+++.+.|+.+
T Consensus 81 ~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 81 VALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp HHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 44678899999999988 79886 2234456688888888754
No 114
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=95.20 E-value=0.0023 Score=43.69 Aligned_cols=39 Identities=15% Similarity=0.311 Sum_probs=26.2
Q ss_pred HhhcCCccccceEEECCEEecCCCCCC---CHHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFVNGFSLAGAGSPL---DYNGWRKVIDPL 144 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~~ga~s~~---~~e~~~~~Id~~ 144 (160)
.+...||.++||+|+||+.+.+..+.. +.+++.++|+++
T Consensus 65 l~~~~~v~~~Pt~~~~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 65 LAHWTGRGTVPNVFIGGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHSCCSSCEEEETTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHhCCCCcCEEEECCEEECChHHHHHHHhCChHHHHHHHc
Confidence 466789999999999999986432211 233566666654
No 115
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=95.20 E-value=0.016 Score=41.67 Aligned_cols=45 Identities=16% Similarity=0.130 Sum_probs=34.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
..++++||.|+||+++ ||+.+.... +.+.+++.+.|++.+....+
T Consensus 76 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~-G~~~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 76 EVSEKYEISSVPTFLFFKNSQKIDRLD-GAHAPELTKKVQRHASSGSF 122 (153)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEEE-SSCHHHHHHHHHHHSCTTSS
T ss_pred HHHHHcCCCCCCEEEEEECCEEEEEEe-CCCHHHHHHHHHHHhccccC
Confidence 3567899999999999 998864222 23578899999999866533
No 116
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.10 E-value=0.0054 Score=42.22 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=32.8
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.++||+++ ||+.+....+ .+.+++.+.|+..+...
T Consensus 81 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 81 VAEKYNVEAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp GHHHHTCCSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSSS
T ss_pred HHHHcCCCccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhcc
Confidence 466789999999999 8987643333 56789999999988654
No 117
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=95.08 E-value=0.024 Score=40.08 Aligned_cols=45 Identities=16% Similarity=0.038 Sum_probs=32.7
Q ss_pred HhhcCC--ccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 106 FSATRG--VYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 106 ~a~~~G--V~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
.++.+| |.++|+++| ||+.+....+..+.+++.+.|+++..++.+
T Consensus 95 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 95 FMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp HHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC---
T ss_pred HHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhhc
Confidence 456778 999997666 788755444566799999999999876644
No 118
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=95.07 E-value=0.009 Score=42.64 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=32.4
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.++||+++ ||+.+....+..+.+++.+.|++++...
T Consensus 113 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~~ 158 (164)
T 2h30_A 113 IAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNADL 158 (164)
T ss_dssp HHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCCC
T ss_pred HHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 467789999999987 7887542223556999999999887543
No 119
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.04 E-value=0.016 Score=40.88 Aligned_cols=43 Identities=30% Similarity=0.468 Sum_probs=31.3
Q ss_pred HhhcCCccccc-eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATP-TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTP-TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.++| +|+| ||+.+....+..+.+++.+.|+.++.+.
T Consensus 109 ~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 154 (156)
T 1kng_A 109 ASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKA 154 (156)
T ss_dssp HHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHHH
T ss_pred HHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 45778999999 5666 7887532223455899999999988653
No 120
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=95.04 E-value=0.035 Score=39.41 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=43.7
Q ss_pred HHHHHHhhcCCChhHHHHcccCChhHHHHHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 71 IVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 71 la~~A~~~~Gld~~~~f~~~l~~~~~~~~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.++..++. |++ +++| +--+++..-..-..-.+.-.+.|+.++|..+|||+.+. ...+.+.+++.+++.
T Consensus 32 ~~~~lk~~-Gi~-V~Ry-NL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~VDGevv~-~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 32 DVQWLKQS-GVQ-IERF-NLAQQPMSFVQNEKVKAFIEASGAEGLPLLLLDGETVM-AGRYPKRAELARWFG 99 (110)
T ss_dssp HHHHHHHH-TCC-EEEE-ETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEETTEEEE-ESSCCCHHHHHHHHT
T ss_pred HHHHHHHC-CCe-EEEE-ccccChHHHhcCHHHHHHHHHcCcccCCEEEECCEEEE-eccCCCHHHHHHHhC
Confidence 44444454 777 5554 23344443332222244567889999999999999984 335678999988775
No 121
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=94.99 E-value=0.02 Score=43.38 Aligned_cols=44 Identities=11% Similarity=0.211 Sum_probs=34.7
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..+++.||.|+||+++ ||+.+....+..+.+++.++|+..+...
T Consensus 159 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 159 MLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp HHHHHTTCCSSSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCCcCCeEEEEECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 4567899999999998 8886543344667999999999988654
No 122
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=94.85 E-value=0.048 Score=38.57 Aligned_cols=43 Identities=9% Similarity=0.174 Sum_probs=33.7
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
..++.+||.++||+++ ||+.+... .+.+++.+.|++++....+
T Consensus 100 ~~~~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~~~~~ 145 (152)
T 2lrn_A 100 DVLESYCIVGFPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVNGAKE 145 (152)
T ss_dssp HHHHHTTCCSSCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHTSSSS
T ss_pred HHHHHhCCCcCCeEEEECCCCeEEEee---CCHHHHHHHHHHHHhhccc
Confidence 4567899999999766 79987653 3478999999999876644
No 123
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=94.84 E-value=0.021 Score=39.07 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=29.4
Q ss_pred HhhcCCccccceEEE---CCEEecCCC---CCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAG---SPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~---s~~~~e~~~~~Id~~l 145 (160)
.++++||.++|++++ ||+.. ... +..+.+++.+.|++++
T Consensus 91 ~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 91 IWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp HHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred HHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 456789999999988 88884 223 4566999999998765
No 124
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=94.84 E-value=0.019 Score=35.79 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=24.7
Q ss_pred hcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 108 ATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 108 ~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
++.|+.++|++++||+.+.| ++.++|.++|+
T Consensus 44 ~~~~~~~vP~l~~~g~~~~g----~~~~~l~~~l~ 74 (75)
T 1r7h_A 44 MALGYVQAPVVEVDGEHWSG----FRPERIKQLQA 74 (75)
T ss_dssp HHTTCBCCCEEEETTEEEES----CCHHHHHHHHC
T ss_pred HHcCCCccCEEEECCeEEcC----CCHHHHHHHHh
Confidence 45899999999999998754 44688877764
No 125
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=94.80 E-value=0.021 Score=40.58 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=29.9
Q ss_pred hcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 108 ATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 108 ~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
...||.++|+++| ||+.+.-..+..+.+++.+.|+.++.+...
T Consensus 110 ~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 110 IDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp STTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC----
T ss_pred hccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhcc
Confidence 3348999999666 788754333455699999999999976644
No 126
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=94.79 E-value=0.016 Score=39.67 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=26.7
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDP 143 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~ 143 (160)
..+++.||.|+||+++ ||+.+....+.. .+++.++|++
T Consensus 74 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 74 DIAKECEVTAMPTFVLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp HHHHHTTCCSBSEEEEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred HHHHHCCCCcccEEEEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 3567889999999998 999853222233 6777777653
No 127
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=94.64 E-value=0.021 Score=38.69 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=29.2
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
.++++||.++|++++ ||+.+....+..+.+++.+.|+++
T Consensus 96 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 96 LLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 467789999999988 788764333355689999888764
No 128
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=94.62 E-value=0.028 Score=42.50 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=29.8
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+++.||.|+||+++ ||....-..+..+.+++.+.|++.+
T Consensus 184 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 184 WADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 577899999999998 6765432223455899999998875
No 129
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=94.60 E-value=0.074 Score=40.24 Aligned_cols=44 Identities=9% Similarity=0.032 Sum_probs=36.4
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
..++++||+|+||+++ ||..+. ..+..+.+++.+.|+..+....
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~g~~~~-~~g~~~~~~l~~~i~~~~~~~~ 125 (241)
T 3idv_A 80 VLASRFDVSGYPTIKILKKGQAVD-YEGSRTQEEIVAKVREVSQPDW 125 (241)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEE-CCSCSCHHHHHHHHHHHHSTTC
T ss_pred HHHHhcCCCcCCEEEEEcCCCccc-ccCcccHHHHHHHHhhccCccc
Confidence 4578899999999988 888774 5567889999999999887653
No 130
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=94.55 E-value=0.02 Score=41.12 Aligned_cols=40 Identities=10% Similarity=0.082 Sum_probs=30.7
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCC-CHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPL-DYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~-~~e~~~~~Id~~l~ 146 (160)
..++++||.++|+++| ||+.+. .+.. +.+++.+.|++++.
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC--
T ss_pred HHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhc
Confidence 3467789999999998 788876 3455 69999999998764
No 131
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=94.51 E-value=0.051 Score=41.16 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=34.6
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||+|+||+++ ||+.+. ..+..+.+++.+.|.+.+.+
T Consensus 195 ~l~~~~~v~~~Pt~~~~~~g~~~~-~~g~~~~~~l~~~l~~~~~~ 238 (241)
T 3idv_A 195 DLAKRFDVSGYPTLKIFRKGRPYD-YNGPREKYGIVDYMIEQSGA 238 (241)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEE-CCSCCSHHHHHHHHHHHTTC
T ss_pred HHHHHcCCcccCEEEEEECCeEEE-ecCCCCHHHHHHHHHhhhCC
Confidence 3578899999999988 898875 56678899999999887643
No 132
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.47 E-value=0.029 Score=38.58 Aligned_cols=44 Identities=14% Similarity=0.011 Sum_probs=31.0
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..++++||.++||+++ +|..+....+..+.+++.+.|.+.+.+.
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~~ 126 (130)
T 2dml_A 80 SLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRSG 126 (130)
T ss_dssp HHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHhcC
Confidence 3567789999999988 4431222233556999999999888654
No 133
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=94.42 E-value=0.0088 Score=38.21 Aligned_cols=33 Identities=12% Similarity=0.199 Sum_probs=24.5
Q ss_pred cCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 109 TRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 109 ~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
+.|+.++|++++||+.+.| ++.++++++|++.+
T Consensus 45 ~~g~~~vP~~~~~g~~~~g----~~~~~l~~~l~~~~ 77 (81)
T 1h75_A 45 AQGFRQLPVVIAGDLSWSG----FRPDMINRLHPAPH 77 (81)
T ss_dssp HTTCCSSCEEEETTEEEES----CCHHHHGGGSCCC-
T ss_pred HhCCCccCEEEECCEEEec----CCHHHHHHHHhccc
Confidence 5799999999999998754 34677776665443
No 134
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=94.42 E-value=0.065 Score=38.31 Aligned_cols=44 Identities=11% Similarity=0.167 Sum_probs=32.5
Q ss_pred HhhcCCccccceEEE--CCEEec---------CCCCCC-CHHHHHHHHHHHhhhcC
Q 031378 106 FSATRGVYATPTFFV--NGFSLA---------GAGSPL-DYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~---------ga~s~~-~~e~~~~~Id~~l~~~~ 149 (160)
.++++||.|+||+++ ||+.+. ...+.. +.+++.+.|++++.+..
T Consensus 69 ~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~~ 124 (142)
T 1qgv_A 69 FNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGAR 124 (142)
T ss_dssp TTTSSCSCSSCEEEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHHh
Confidence 478999999999977 888764 111222 38899999999986543
No 135
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=94.34 E-value=0.04 Score=38.18 Aligned_cols=40 Identities=18% Similarity=0.157 Sum_probs=30.7
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++++||.++|++++ ||+.+.... +.+++.+.|++++.+
T Consensus 105 ~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 105 ETAKQYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELLKT 147 (148)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC--
T ss_pred HHHHhcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHcc
Confidence 3467789999999777 798876433 699999999998753
No 136
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=94.33 E-value=0.031 Score=38.78 Aligned_cols=37 Identities=27% Similarity=0.424 Sum_probs=26.1
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.++.+||.++|++++ ||+.+....+ .+++.++++.+.
T Consensus 103 ~~~~~~i~~~P~~~lid~~G~i~~~~~g---~~~~~~~l~~l~ 142 (148)
T 3hcz_A 103 FKITYDIYATPVLYVLDKNKVIIAKRIG---YENLDDFLVQYE 142 (148)
T ss_dssp HHHHHCCCSSCEEEEECTTCBEEEESCC---GGGHHHHHHHHH
T ss_pred HHHhcCcCCCCEEEEECCCCcEEEecCC---HHHHHHHHHHHH
Confidence 456789999999888 8988765444 566666655554
No 137
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=94.28 E-value=0.027 Score=43.10 Aligned_cols=44 Identities=20% Similarity=0.294 Sum_probs=34.8
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
.++++||.|+||+++ ||+.+.-..+..+.+++.++|+..+....
T Consensus 76 l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 76 TAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp TGGGGTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred HHHHcCCCcCCEEEEEECCeEEEEeccccChHHHHHHHHhhccccc
Confidence 467899999999999 89876433345669999999999986553
No 138
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.24 E-value=0.035 Score=36.32 Aligned_cols=33 Identities=15% Similarity=0.335 Sum_probs=26.4
Q ss_pred HhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
+.+..|+.++|++++||..+.| ++.++|.++|+
T Consensus 59 l~~~~g~~~vP~l~~~g~~i~G----~~~~~l~~~l~ 91 (92)
T 3ic4_A 59 VHSISGSYSVPVVVKGDKHVLG----YNEEKLKELIR 91 (92)
T ss_dssp HHHHHSSSCSCEEEETTEEEES----CCHHHHHHHHH
T ss_pred HHHhcCCCCcCEEEECCEEEeC----CCHHHHHHHhc
Confidence 3456789999999999998854 45788888875
No 139
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=94.10 E-value=0.04 Score=38.28 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=28.2
Q ss_pred hhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 107 SATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 107 a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
++..||.++|++++ +|+.+.+ ..+.+++.++|++..
T Consensus 102 ~~~~~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 102 RQLYDIRATPTIYLLDGRKRVILK---DTSMEQLIDYLATQA 140 (142)
T ss_dssp TTCSCCCSSSEEEEECTTCBEEEC---SCCHHHHHHHHHC--
T ss_pred HHHcCCCCCCeEEEECCCCCEEec---CCCHHHHHHHHHHHc
Confidence 66899999999877 7988876 455999999888654
No 140
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=94.05 E-value=0.06 Score=37.22 Aligned_cols=41 Identities=15% Similarity=0.175 Sum_probs=31.4
Q ss_pred HHhhcCCc---cccceEEE---CCEEecCCCC-------CCCHHHHHHHHHHHh
Q 031378 105 KFSATRGV---YATPTFFV---NGFSLAGAGS-------PLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV---~GTPTffI---NG~~~~ga~s-------~~~~e~~~~~Id~~l 145 (160)
..++++|| .|+||+++ ||+.+....+ ..+.+++.++|+.+.
T Consensus 79 ~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 79 ELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 45788999 99999998 8887743323 467899999988764
No 141
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=94.05 E-value=0.027 Score=38.87 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=27.1
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id 142 (160)
.++++||.++|++++ ||+.+....+..+.+++.++|+
T Consensus 106 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 106 LMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp HHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred HHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 467889999999777 7877543333556899888774
No 142
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=94.00 E-value=0.023 Score=40.82 Aligned_cols=42 Identities=31% Similarity=0.592 Sum_probs=30.2
Q ss_pred HhhcCCccccc-eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 106 FSATRGVYATP-TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 106 ~a~~~GV~GTP-TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.++++||.|+| +|+| ||+.+....+..+.+++.+.|+.++.+
T Consensus 117 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 161 (168)
T 2b1k_A 117 LGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEK 161 (168)
T ss_dssp HHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHHH
T ss_pred HHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 35667999999 6666 687753223355689999999888754
No 143
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=93.83 E-value=0.053 Score=37.34 Aligned_cols=40 Identities=8% Similarity=-0.208 Sum_probs=28.0
Q ss_pred HHhhcCCccccceEEE--CCEEec--CCCCCCCHHHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFV--NGFSLA--GAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~--ga~s~~~~e~~~~~Id~~ 144 (160)
..+++.||.|+||+++ +|.... ...+..+.+++.++|++.
T Consensus 83 ~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 83 DVIERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHHHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred hHHHhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 4578899999999988 554311 122356699999998763
No 144
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=93.75 E-value=0.053 Score=34.31 Aligned_cols=30 Identities=17% Similarity=0.380 Sum_probs=23.0
Q ss_pred hhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 107 SATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.+..|+.++|++++||+.+.| ++++.++++
T Consensus 44 ~~~~~~~~vP~l~~~g~~i~g------~~~i~~~~~ 73 (82)
T 1fov_A 44 IKRSGRTTVPQIFIDAQHIGG------YDDLYALDA 73 (82)
T ss_dssp HHHHSSCCSCEEEETTEEEES------HHHHHHHHH
T ss_pred HHHhCCCCcCEEEECCEEEeC------HHHHHHHHH
Confidence 445689999999999998854 666666554
No 145
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=93.74 E-value=0.016 Score=39.52 Aligned_cols=44 Identities=14% Similarity=-0.005 Sum_probs=30.4
Q ss_pred HHhhcCCccccceEEE--CCEEe---cCC-CCCCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV--NGFSL---AGA-GSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~---~ga-~s~~~~e~~~~~Id~~l~~~ 148 (160)
..++++||.|+||+++ +|..+ .|. .+..+.+++.+.|+..+...
T Consensus 66 ~~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 66 QTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp HHHHHTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 3567899999999988 33322 121 01256899999999998644
No 146
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=93.70 E-value=0.084 Score=38.80 Aligned_cols=42 Identities=7% Similarity=-0.008 Sum_probs=31.1
Q ss_pred hhcCCccccceEEE---CCEEecCCCCC-------CCHHHHHHHHHHHhhhc
Q 031378 107 SATRGVYATPTFFV---NGFSLAGAGSP-------LDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV~GTPTffI---NG~~~~ga~s~-------~~~e~~~~~Id~~l~~~ 148 (160)
+.+.+|.|+||+++ ||+.+....+. ++++++.++|+......
T Consensus 93 ~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 93 NLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp GGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred HhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 56789999999998 79887644444 56677777777765443
No 147
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=93.47 E-value=0.088 Score=37.05 Aligned_cols=40 Identities=23% Similarity=0.373 Sum_probs=31.5
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..++.+||.++|++++ ||+.+.-. .+.+++.+.|++++.+
T Consensus 107 ~~~~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 107 EVAKQYSIYKIPANILLSSDGKILAKN---LRGEELKKKIENIVEE 149 (150)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEES---CCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEECCCCEEEEcc---CCHHHHHHHHHHHHhc
Confidence 3466789999999888 78887543 3589999999998864
No 148
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.39 E-value=0.047 Score=37.64 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=30.0
Q ss_pred hhcCCccccceEEE--CCEEec--CCC-CCCCHHHHHHHHHHHhhhc
Q 031378 107 SATRGVYATPTFFV--NGFSLA--GAG-SPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV~GTPTffI--NG~~~~--ga~-s~~~~e~~~~~Id~~l~~~ 148 (160)
++++||.|+||+++ +|..+. ... +..+.+++.++|+..+.+.
T Consensus 74 ~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 74 NDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp CSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred HhhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 56799999999988 553221 011 2466899999999998655
No 149
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.32 E-value=0.037 Score=37.47 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=28.4
Q ss_pred HhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
.+.+.| .++|++++||+.+. ...++.++++++|+..+.
T Consensus 59 l~~~~g-~~vP~l~~~g~~~~--~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 59 WYERYK-FDIPVFHLNGQFLM--MHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHSS-SSCSEEEESSSEEE--ESSCCHHHHHHHHHSSSC
T ss_pred HHHHHC-CCCCEEEECCEEEE--ecCCCHHHHHHHHHHHHh
Confidence 356788 99999999999741 124668899888876654
No 150
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=93.30 E-value=0.036 Score=37.04 Aligned_cols=39 Identities=21% Similarity=0.214 Sum_probs=28.2
Q ss_pred hhcCCccccceEE-ECCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 107 SATRGVYATPTFF-VNGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 107 a~~~GV~GTPTff-ING~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
+.+.|++ .||++ +||+.+.| .++.+++.+.|+..+...+
T Consensus 41 ~~~~g~~-vPtl~~~~G~~v~g---~~~~~~L~~~l~~~~~~~~ 80 (87)
T 1ttz_A 41 ESAYGLR-VPVLRDPMGRELDW---PFDAPRLRAWLDAAPHALE 80 (87)
T ss_dssp HHHHTTT-CSEEECTTCCEEES---CCCHHHHHHHHHTCC----
T ss_pred HHHhCCC-cCeEEEECCEEEeC---CCCHHHHHHHHHHHHHHHh
Confidence 4456888 99999 89999864 5569999999987776554
No 151
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.27 E-value=0.068 Score=41.97 Aligned_cols=41 Identities=29% Similarity=0.501 Sum_probs=31.8
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.|+||+++ ||+.+....+..+.+++.+.|+..+
T Consensus 71 ~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 71 MIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp HHHHTTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHcCCCCCCeEEEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 4578999999999988 9987643334555888988888765
No 152
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=93.26 E-value=0.062 Score=37.60 Aligned_cols=43 Identities=28% Similarity=0.282 Sum_probs=29.6
Q ss_pred HhhcCCccccceEEE---CCEEecCCCC--CCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGS--PLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s--~~~~e~~~~~Id~~l~~~ 148 (160)
.++.+||.++|++++ ||+.+....+ ..+.+++.+.|++.+...
T Consensus 97 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 97 TPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred hHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 467789999999555 7877542212 345689999999888665
No 153
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=93.23 E-value=0.07 Score=39.23 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=32.2
Q ss_pred hhcCCccccceEEE---CCEEecC---------CCCCCCHHHHHHHHHHHhhhcC
Q 031378 107 SATRGVYATPTFFV---NGFSLAG---------AGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 107 a~~~GV~GTPTffI---NG~~~~g---------a~s~~~~e~~~~~Id~~l~~~~ 149 (160)
++.+||.++|+++| ||+.+.- ..+..+.+++.+.|+.++.++.
T Consensus 123 ~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 123 AKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp HHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred HHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 45668999998877 7887632 1234578999999999997653
No 154
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=93.19 E-value=0.029 Score=39.46 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=27.3
Q ss_pred HhhcCCccccc-eEEE--CCEEec---CCCCCCCHHHHHHHHHHHhhhcCCC
Q 031378 106 FSATRGVYATP-TFFV--NGFSLA---GAGSPLDYNGWRKVIDPLLSEKGKK 151 (160)
Q Consensus 106 ~a~~~GV~GTP-TffI--NG~~~~---ga~s~~~~e~~~~~Id~~l~~~~~~ 151 (160)
.++.+||.++| +|+| ||+.+. |.. .++.+++.+.|+.+.......
T Consensus 98 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~-~~~~~~l~~~l~~l~~~~~~~ 148 (154)
T 3kcm_A 98 VGKLYGTTGVPETFVIDRHGVILKKVVGAM-EWDHPEVIAFLNNELSKAREG 148 (154)
T ss_dssp HHHHHTCCSBCEEEEECTTSBEEEEEESCC-CTTSHHHHHHHHTC-------
T ss_pred HHHHhCCCCCCeEEEECCCCcEEEEEcCCC-ccccHHHHHHHHHHHHHhhhc
Confidence 35677999999 5555 788753 322 356789999999988776543
No 155
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=93.05 E-value=0.041 Score=35.19 Aligned_cols=20 Identities=20% Similarity=0.479 Sum_probs=16.5
Q ss_pred HhhcCCccccceEEECCEEe
Q 031378 106 FSATRGVYATPTFFVNGFSL 125 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~ 125 (160)
.+++.||.++||+++||+.+
T Consensus 47 ~~~~~gv~~vPt~~i~g~~~ 66 (80)
T 2k8s_A 47 EAEKAGVKSVPALVIDGAAF 66 (80)
T ss_dssp HHHHHTCCEEEEEEETTEEE
T ss_pred HHHHcCCCcCCEEEECCEEE
Confidence 34567999999999999964
No 156
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=93.03 E-value=0.053 Score=39.80 Aligned_cols=42 Identities=26% Similarity=0.540 Sum_probs=30.5
Q ss_pred hhcCCccccc-eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 107 SATRGVYATP-TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV~GTP-TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
++.+||.++| +|+| ||+.+.-..+..+.+++.+.|++++.+.
T Consensus 125 ~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~l 169 (176)
T 3kh7_A 125 GLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQL 169 (176)
T ss_dssp HHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHHH
T ss_pred HHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 5667999999 4555 6877643333556999999999988654
No 157
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=92.91 E-value=0.12 Score=38.88 Aligned_cols=44 Identities=7% Similarity=0.264 Sum_probs=32.7
Q ss_pred HhhcCCccccceEEE--CCEEe--c-------CCCCCCC-HHHHHHHHHHHhhhcC
Q 031378 106 FSATRGVYATPTFFV--NGFSL--A-------GAGSPLD-YNGWRKVIDPLLSEKG 149 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~--~-------ga~s~~~-~e~~~~~Id~~l~~~~ 149 (160)
.+.+.||.+.|||++ ||+.+ . -..+..+ .+++.++|+..+.+.+
T Consensus 87 ~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~ 142 (160)
T 2av4_A 87 FNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGAR 142 (160)
T ss_dssp TTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhh
Confidence 489999999999954 99987 3 2333344 8899999998874433
No 158
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=92.84 E-value=0.1 Score=33.84 Aligned_cols=30 Identities=13% Similarity=0.366 Sum_probs=22.5
Q ss_pred hhcC-CccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 107 SATR-GVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 107 a~~~-GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.+.. |+.++|++++||+.+.| ++++.++++
T Consensus 47 ~~~~~~~~~vP~l~~~g~~i~g------~~~i~~~~~ 77 (89)
T 2klx_A 47 VQRANGRNTFPQIFIGDYHVGG------CDDLYALEN 77 (89)
T ss_dssp HHHHHSSCCSCEEEETTEECCS------HHHHHHHHH
T ss_pred HHHhCCCCCcCEEEECCEEEeC------hHHHHHHHH
Confidence 3445 89999999999998753 666666544
No 159
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=92.57 E-value=0.12 Score=34.37 Aligned_cols=21 Identities=19% Similarity=0.430 Sum_probs=17.6
Q ss_pred hhcCCccccceEEECCEEecC
Q 031378 107 SATRGVYATPTFFVNGFSLAG 127 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~g 127 (160)
.+..|+.+.|++|+||+.+.|
T Consensus 61 ~~~~g~~~vP~i~~~g~~i~g 81 (105)
T 1kte_A 61 QQLTGARTVPRVFIGKECIGG 81 (105)
T ss_dssp HHHHSCCCSCEEEETTEEEES
T ss_pred HHHhCCCCcCeEEECCEEEec
Confidence 445699999999999999854
No 160
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=92.50 E-value=0.04 Score=40.26 Aligned_cols=22 Identities=32% Similarity=0.554 Sum_probs=18.6
Q ss_pred HhhcCCccccceEEECCEEecC
Q 031378 106 FSATRGVYATPTFFVNGFSLAG 127 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~~g 127 (160)
.++..|+.++|++|+||+.+.|
T Consensus 94 L~~~~g~~tvP~ifi~G~~igG 115 (146)
T 2ht9_A 94 LYKMTGERTVPRIFVNGTFIGG 115 (146)
T ss_dssp HHHHHSCCCSCEEEETTEEEES
T ss_pred HHHHhCCCCcCeEEECCEEEeC
Confidence 4566799999999999999865
No 161
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=92.28 E-value=0.085 Score=37.16 Aligned_cols=38 Identities=21% Similarity=0.147 Sum_probs=28.1
Q ss_pred hcCCccccceEEE--CCEEec---CCCC----CCCHHHHHHHHHHHh
Q 031378 108 ATRGVYATPTFFV--NGFSLA---GAGS----PLDYNGWRKVIDPLL 145 (160)
Q Consensus 108 ~~~GV~GTPTffI--NG~~~~---ga~s----~~~~e~~~~~Id~~l 145 (160)
.++||.++||+++ ||+.+. |..+ .++.++++++|++.-
T Consensus 74 ~~~~i~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 74 EHYHDNCLPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SSCCSSCCSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred ccCCCCCCCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 6899999999988 887653 4321 236888999888773
No 162
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=92.24 E-value=0.1 Score=35.18 Aligned_cols=37 Identities=14% Similarity=-0.009 Sum_probs=26.8
Q ss_pred CccccceEEE--CC-EE-ecCCCCCCCHHHHHHHHHHHhhh
Q 031378 111 GVYATPTFFV--NG-FS-LAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 111 GV~GTPTffI--NG-~~-~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
||.++||+++ +| +. .....+..+.+++.++|++.+..
T Consensus 78 ~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 78 EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 9999999988 54 41 22334466799999999887643
No 163
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=92.06 E-value=0.15 Score=35.54 Aligned_cols=30 Identities=17% Similarity=0.454 Sum_probs=23.5
Q ss_pred hhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 107 SATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.+..|+.+.|++||||+.+-| ++++.++.+
T Consensus 75 ~~~~g~~tvP~vfi~g~~igG------~d~l~~l~~ 104 (118)
T 3c1r_A 75 YEINGQRTVPNIYINGKHIGG------NDDLQELRE 104 (118)
T ss_dssp HHHHSCCSSCEEEETTEEEES------HHHHHHHHH
T ss_pred HHHhCCCCcCEEEECCEEEEc------HHHHHHHHH
Confidence 455689999999999999854 677666654
No 164
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=91.95 E-value=0.12 Score=35.40 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=17.7
Q ss_pred hhcCCccccceEEECCEEecC
Q 031378 107 SATRGVYATPTFFVNGFSLAG 127 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~g 127 (160)
++..|+.++|++|+||+.+.|
T Consensus 68 ~~~~g~~~vP~v~i~g~~igg 88 (114)
T 2hze_A 68 EQITGGKTVPRIFFGKTSIGG 88 (114)
T ss_dssp HHHHSCCSSCEEEETTEEEES
T ss_pred HHHhCCCCcCEEEECCEEEeC
Confidence 455699999999999999854
No 165
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=91.80 E-value=0.34 Score=35.59 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=35.3
Q ss_pred HHHhhcCCccccceEEE---C-CEEecCCCCCCCHHHHHHHHHHHhhhcCCCC
Q 031378 104 FKFSATRGVYATPTFFV---N-GFSLAGAGSPLDYNGWRKVIDPLLSEKGKKR 152 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI---N-G~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~ 152 (160)
.++.+.+||.|+|++++ + |..+... ++.+.+++.+.|+..+...++.+
T Consensus 91 ~~l~~~y~v~~~P~~~fld~~~G~~l~~~-~g~~~~~fl~~L~~~l~~~~~~~ 142 (153)
T 2dlx_A 91 QRYIQFYKLGDFPYVSILDPRTGQKLVEW-HQLDVSSFLDQVTGFLGEHGQLD 142 (153)
T ss_dssp HHHHHHHTCCSSSEEEEECTTTCCCCEEE-SSCCHHHHHHHHHHHHHHTCSCS
T ss_pred HHHHHHcCCCCCCEEEEEeCCCCcEeeec-CCCCHHHHHHHHHHHHHhcCCCC
Confidence 45567889999999988 4 7544322 23679999999999997775543
No 166
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=91.48 E-value=0.2 Score=41.42 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=34.0
Q ss_pred HHhhcCCccccceEEE--CCEEec-CCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLA-GAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~-ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..+++.||+|+||+++ ||..+. ...+..+.+++.++|...+..
T Consensus 73 ~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (382)
T 2r2j_A 73 DIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSD 118 (382)
T ss_dssp HHHHHTTCCEESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSC
T ss_pred HHHHhcCCCcCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccC
Confidence 4578899999999988 898653 244567799999999988743
No 167
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=91.48 E-value=0.1 Score=36.39 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=27.3
Q ss_pred HHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id 142 (160)
..++..||.++||+++ ||+++.. ..+.++++++|+
T Consensus 104 ~~~~~~~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~l~ 141 (142)
T 3eur_A 104 KNKNLYDLRAIPTLYLLDKNKTVLLK---DATLQKVEQYLA 141 (142)
T ss_dssp HHTTCSCCTTCSEEEEECTTCBEEEE---EECHHHHHHHHH
T ss_pred hhhhhcCCCcCCeEEEECCCCcEEec---CCCHHHHHHHHh
Confidence 3578999999999887 7888754 334888888775
No 168
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=91.47 E-value=0.2 Score=35.03 Aligned_cols=45 Identities=9% Similarity=0.200 Sum_probs=34.1
Q ss_pred HhhcCCccc--cceEEE--C--CEEecC-CCCCCCHHHHHHHHHHHhhhcCC
Q 031378 106 FSATRGVYA--TPTFFV--N--GFSLAG-AGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 106 ~a~~~GV~G--TPTffI--N--G~~~~g-a~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
.+.++||++ .||+++ | |+++.- ..+..+.+++.++|+..+.++=+
T Consensus 68 ~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~ 119 (133)
T 2djk_A 68 HAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIE 119 (133)
T ss_dssp GTTTTTCCSSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCC
T ss_pred HHHHcCCCcccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcC
Confidence 578999999 999988 5 776531 11456699999999999876543
No 169
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=90.91 E-value=0.28 Score=34.54 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=32.5
Q ss_pred HHhhcCCccccc----------------eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATP----------------TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTP----------------TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
+.++.+||.++| +|+| ||+.+.-..+..+.+++.+.|++++++
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 162 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRP 162 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHGG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 457789999999 6666 688764333456689999999998864
No 170
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=90.82 E-value=0.23 Score=41.89 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=34.0
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..+++.||+|+||+++ ||..+....+..+.+++.+.+...+..
T Consensus 66 ~l~~~~~v~~~Ptl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~ 110 (481)
T 3f8u_A 66 NTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGP 110 (481)
T ss_dssp HHHHHTTCCEESEEEEEETTEEEEECCSCSSHHHHHHHHHHHTSC
T ss_pred HHHHhcCCCCCCEEEEEeCCceeeeecCccCHHHHHHHHHhhccc
Confidence 4578899999999998 896544445567799999999888743
No 171
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=90.77 E-value=0.14 Score=37.41 Aligned_cols=43 Identities=19% Similarity=0.256 Sum_probs=31.0
Q ss_pred HhhcCCccccceEEE---CCEEec-CCC-------CCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLA-GAG-------SPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~-ga~-------s~~~~e~~~~~Id~~l~~~ 148 (160)
.++.+||.++|+++| ||+++. |.. +..+.+++.+.|+++++++
T Consensus 108 ~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 108 VAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred HHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 356789999998777 787754 221 1125789999999998755
No 172
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=90.73 E-value=0.2 Score=33.78 Aligned_cols=29 Identities=17% Similarity=0.272 Sum_probs=22.6
Q ss_pred hcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 108 ATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 108 ~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
...|+.+.|++|+||+.+-| ++++.++.+
T Consensus 66 ~~~g~~~vP~v~i~g~~igg------~d~~~~l~~ 94 (105)
T 2yan_A 66 AYSNWPTYPQLYVKGELVGG------LDIVKELKE 94 (105)
T ss_dssp HHHTCCSSCEEEETTEEEEC------HHHHHHHHH
T ss_pred HHHCCCCCCeEEECCEEEeC------hHHHHHHHH
Confidence 33588999999999999864 777777644
No 173
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=90.71 E-value=0.26 Score=33.29 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=21.8
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
|+.+.|++||||+.+-| ++++.++.+
T Consensus 64 g~~~vP~ifi~g~~igG------~d~l~~~~~ 89 (99)
T 3qmx_A 64 GKRSLPQIFIDDQHIGG------CDDIYALDG 89 (99)
T ss_dssp TCCCSCEEEETTEEEES------HHHHHHHHH
T ss_pred CCCCCCEEEECCEEEeC------hHHHHHHHH
Confidence 89999999999999854 787777665
No 174
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=90.68 E-value=0.37 Score=32.29 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=24.2
Q ss_pred hcCCccccceEEECC-EEecCCCCCCCHHHHHHHHH
Q 031378 108 ATRGVYATPTFFVNG-FSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 108 ~~~GV~GTPTffING-~~~~ga~s~~~~e~~~~~Id 142 (160)
+..|+.+.|+++||| +.+- +++-++|.++|+
T Consensus 71 ~~~g~~~vP~l~i~~~~~ig----g~~~~~l~~~L~ 102 (103)
T 3nzn_A 71 RFNPSVSFPTTIINDEKAIV----GFKEKEIRESLG 102 (103)
T ss_dssp HHCTTCCSCEEEETTTEEEE----SCCHHHHHHHTT
T ss_pred HhCCCCccCEEEECCCEEEE----cCCHHHHHHHhC
Confidence 446999999999999 8774 455788887763
No 175
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=90.59 E-value=0.25 Score=37.59 Aligned_cols=43 Identities=26% Similarity=0.425 Sum_probs=32.1
Q ss_pred HhhcCCccccceEEE---CCEEec-C--------CCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLA-G--------AGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~-g--------a~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++.+||.++|+++| ||+++. | ..+..+.+++++.|++++.++
T Consensus 135 ~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~ 189 (218)
T 3u5r_E 135 VAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGK 189 (218)
T ss_dssp HHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTC
T ss_pred HHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCC
Confidence 456789999999888 788762 2 112345799999999999765
No 176
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=90.35 E-value=0.37 Score=36.11 Aligned_cols=40 Identities=8% Similarity=0.211 Sum_probs=29.4
Q ss_pred HHHhhcCCccccceEEE--CC----EEecCCCCCCCHHHHHHHHHHHhh
Q 031378 104 FKFSATRGVYATPTFFV--NG----FSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI--NG----~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
-..+++.||.++||+++ || ..+.|..+ .+++.++++..+.
T Consensus 68 ~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~---~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 68 KELAKRYRIDRAPATTITQDGKDFGVRYFGLPA---GHEFAAFLEDIVD 113 (226)
T ss_dssp HHHHHHTTCCSSSEEEEEETTBCCSEEEESCCC---TTHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCceEEEEcCCceeeEEEeccCc---HHHHHHHHHHHHh
Confidence 34578899999999999 76 34556444 6778888877664
No 177
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=90.22 E-value=0.16 Score=34.71 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=27.1
Q ss_pred HHhhcCCccccceEEE--C----CEEecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVYATPTFFV--N----GFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--N----G~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..++++||.|+||+++ + |+.+.... +..-++++++|+...
T Consensus 67 ~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~-G~~~~~l~~~~~~~~ 112 (118)
T 2f51_A 67 NAADAYGVSSIPALFFVKKEGNEIKTLDQFV-GADVSRIKADIEKFK 112 (118)
T ss_dssp HHHHHTTCCSSSEEEEEEEETTEEEEEEEEE-SCCHHHHHHHHHHHC
T ss_pred HHHHhcCCCCCCEEEEEeCCCCcceEEEeec-CCCHHHHHHHHHHhh
Confidence 3577899999999988 6 87753221 223466777777654
No 178
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=90.22 E-value=0.39 Score=33.53 Aligned_cols=37 Identities=24% Similarity=0.166 Sum_probs=27.3
Q ss_pred hhcCCccccceEEE--CCEEec---CCCC----CCCHHHHHHHHHH
Q 031378 107 SATRGVYATPTFFV--NGFSLA---GAGS----PLDYNGWRKVIDP 143 (160)
Q Consensus 107 a~~~GV~GTPTffI--NG~~~~---ga~s----~~~~e~~~~~Id~ 143 (160)
+.++||.+.|||++ ||+.+. |..+ .++.++++.+|..
T Consensus 66 ~~~~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 66 IQHYHDNCLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp STTCCGGGCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred HHHCCCCCCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 58899999999999 998764 4332 4567777766653
No 179
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=90.13 E-value=0.22 Score=35.88 Aligned_cols=41 Identities=24% Similarity=0.300 Sum_probs=30.9
Q ss_pred hhcCCccccc-------eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 107 SATRGVYATP-------TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 107 a~~~GV~GTP-------TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.+..||.|+| +|+| ||+++.-..+..+.+++.+.|++++..
T Consensus 120 ~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 120 SQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKE 169 (171)
T ss_dssp HHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHTC
T ss_pred hccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3568999999 6677 788764333456689999999999864
No 180
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.04 E-value=0.24 Score=34.94 Aligned_cols=22 Identities=32% Similarity=0.554 Sum_probs=18.4
Q ss_pred HhhcCCccccceEEECCEEecC
Q 031378 106 FSATRGVYATPTFFVNGFSLAG 127 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~~g 127 (160)
.++..|+.++|++|+||+.+.|
T Consensus 72 l~~~~g~~~vP~l~i~G~~igg 93 (130)
T 2cq9_A 72 LYKMTGERTVPRIFVNGTFIGG 93 (130)
T ss_dssp HHHHHSSCCSSEEEETTEEEEE
T ss_pred HHHHhCCCCcCEEEECCEEEcC
Confidence 3556799999999999999854
No 181
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=90.03 E-value=0.13 Score=35.45 Aligned_cols=37 Identities=22% Similarity=0.165 Sum_probs=25.6
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDP 143 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~ 143 (160)
.++++||.|+||+++ +|..+.|.. ..+.+.++++|++
T Consensus 84 ~~~~~~i~~~Pt~~~~~~~~~~~g~~-~~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FRKNLKVTAVPTLLKYGTPQKLVESE-CLQANLVEMLFSE 122 (123)
T ss_dssp HHHHHCCCSSSEEEETTSSCEEEGGG-GGCHHHHHHHHHC
T ss_pred HHHHCCCCeeCEEEEEcCCceEeccc-cCCHHHHHHHHhc
Confidence 455689999999999 566665543 2446777777653
No 182
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=89.91 E-value=0.32 Score=33.02 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=22.2
Q ss_pred hcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 108 ATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 108 ~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
+..|+.+.|++||||+.+-| ++++.++.+
T Consensus 67 ~~~g~~tvP~ifi~g~~igG------~~~~~~~~~ 95 (113)
T 3rhb_A 67 RLTGQHTVPNVFVCGKHIGG------CTDTVKLNR 95 (113)
T ss_dssp HHHSCCSSCEEEETTEEEES------HHHHHHHHH
T ss_pred HHhCCCCcCEEEECCEEEcC------cHHHHHHHH
Confidence 34588999999999999864 676665543
No 183
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=89.62 E-value=0.25 Score=32.04 Aligned_cols=29 Identities=14% Similarity=0.320 Sum_probs=21.2
Q ss_pred hhcCCccccceEEECCEEecCCCCCCCHHHHHHHH
Q 031378 107 SATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~I 141 (160)
.+..|+.++|++++||+.+.| ++++.+++
T Consensus 49 ~~~~~~~~vP~l~~~g~~i~g------~~~i~~~~ 77 (92)
T 2khp_A 49 QERSGRNTFPQIFIGSVHVGG------CDDLYALE 77 (92)
T ss_dssp HHHHTSSCCCEEEETTEEEES------HHHHHHHH
T ss_pred HHHhCCCCcCEEEECCEEEcC------HHHHHHHH
Confidence 344589999999999998854 55555543
No 184
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=89.56 E-value=0.23 Score=35.27 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=30.7
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++.+||.++|++++ ||+.+.-..+ ..+|.+.+..++.+-
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~~g---~~~~e~~~~~~~~~~ 147 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARGEN---IKDLDEAIKKLLEGH 147 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEETTT---CSCHHHHHHHHHGGG
T ss_pred HHHHcCcccCceEEEECCCCeEEEecCC---HHHHHHHHHHHHhcc
Confidence 356678999999887 8998765334 788888888887665
No 185
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=89.47 E-value=0.32 Score=40.08 Aligned_cols=41 Identities=7% Similarity=0.124 Sum_probs=33.3
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..+++.||+|.||+++ ||++. ...+..+.+++.+.|...+.
T Consensus 82 ~l~~~~~V~~~PTl~~f~~G~~~-~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 82 AVAKKLGLTEEDSIYVFKEDEVI-EYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp HHHHHHTCCSTTEEEEEETTEEE-ECCSCCSHHHHHHHHHHHHS
T ss_pred HHHHHcCCCcCceEEEEECCcEE-EeCCCCCHHHHHHHHHHhcC
Confidence 4578899999999988 99876 34557779999999988764
No 186
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=89.39 E-value=0.31 Score=40.59 Aligned_cols=44 Identities=16% Similarity=0.041 Sum_probs=32.6
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
.++.+||.++|+++| ||+++.-..+..+.+++.+.|++++....
T Consensus 156 l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e~~ 202 (352)
T 2hyx_A 156 TWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAK 202 (352)
T ss_dssp HHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHHHS
T ss_pred HHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhhcc
Confidence 356789999999665 78876432334559999999999986553
No 187
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=89.32 E-value=0.46 Score=38.48 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=30.5
Q ss_pred HHHHhhcCCcccc--ceEEECCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 103 SFKFSATRGVYAT--PTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 103 ~~k~a~~~GV~GT--PTffING~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
...++++.|.++. |++||||+...+ +.+.++|.+.|.+....
T Consensus 101 ~~~~~~~~G~~tVyTPqI~Ing~~~v~---G~d~~~l~~~l~~~~~~ 144 (270)
T 2axo_A 101 QYGYMRALGRNGVYTPQAILNGRDHVK---GADVRGIYDRLDAFKRE 144 (270)
T ss_dssp HHHHHHHTTCSCCCSSEEEETTTEEEE---TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcccCCEEEECCEEeec---CCCHHHHHHHHHHhhcc
Confidence 4457888898866 999999995323 33478888888776544
No 188
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=89.03 E-value=0.25 Score=34.34 Aligned_cols=35 Identities=9% Similarity=0.142 Sum_probs=25.5
Q ss_pred HhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDP 143 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~ 143 (160)
.++.+||.++|++++ ||+.+.- ..+.+++.+.|++
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 105 LYKKYDLRKGFKNFLINDEGVIIAA---NVTPEKLTEILKA 142 (143)
T ss_dssp HHHHTTGGGCCCEEEECTTSBEEEE---SCCHHHHHHHHTC
T ss_pred HHHHcCCCCCCcEEEECCCCEEEEc---cCCHHHHHHHHHh
Confidence 467789999997666 6888754 3347888887754
No 189
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=88.61 E-value=0.43 Score=35.14 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=31.5
Q ss_pred hhcCCccccc-------eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 107 SATRGVYATP-------TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV~GTP-------TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
....||.|+| +|+| ||+++.-..+..+.+++.+.|+++++..
T Consensus 137 ~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 187 (190)
T 2vup_A 137 KTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLEST 187 (190)
T ss_dssp HHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHHCC
T ss_pred hhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhhc
Confidence 3557999999 6666 6887653334556899999999998754
No 190
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=88.51 E-value=0.52 Score=33.46 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=33.1
Q ss_pred HHhhcCCccccc---------------e-EEE--CCEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 105 KFSATRGVYATP---------------T-FFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 105 k~a~~~GV~GTP---------------T-ffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
+.++.+||.++| + |+| +|+.+.-..+..+.+++.+.|++++...+
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 167 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAAFR 167 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 346778999988 4 666 68876433345669999999999997653
No 191
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=88.09 E-value=0.43 Score=34.57 Aligned_cols=38 Identities=18% Similarity=0.061 Sum_probs=28.5
Q ss_pred CCccccce-EEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 110 RGVYATPT-FFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 110 ~GV~GTPT-ffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.+|.++|+ |+| +|+++....+..+.+++.+.|+.++.+
T Consensus 142 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 142 VPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp CCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 57999995 555 688764334456799999999998864
No 192
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=88.04 E-value=0.36 Score=41.10 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=32.4
Q ss_pred HHhhcCCccccceEEE--CCEE--ecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFS--LAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~--~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..+++.||+|+||+++ ||.. .....+..+.+++.+.+...+.
T Consensus 77 ~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 77 DLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp HHHHHTTCCSSSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTS
T ss_pred HHHHhcCCCcCCEEEEEeCCccccceeecCCCCHHHHHHHHHHhcC
Confidence 4688999999999988 8874 2233446779999999988774
No 193
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=87.61 E-value=0.75 Score=34.58 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=29.1
Q ss_pred HHHhhcCCccccceEEE--CC---EEecCCCCCCCHHHHHHHHHHHhh
Q 031378 104 FKFSATRGVYATPTFFV--NG---FSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI--NG---~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
-..+++.||+|+||+++ || ..+.|..+ .+++.+++...+.
T Consensus 71 ~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~---~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 71 KEETEKYGVDRVPTIVIEGDKDYGIRYIGLPA---GLEFTTLINGIFH 115 (229)
T ss_dssp HHHHHHTTCCBSSEEEEESSSCCCEEEESCCC---TTHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCcEEEEECCCcccceecCCcc---HHHHHHHHHHHHh
Confidence 34588999999999999 33 44556544 7778888777664
No 194
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=87.12 E-value=1.2 Score=29.78 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=27.9
Q ss_pred hcCCccccceEEE-CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 108 ATRGVYATPTFFV-NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 108 ~~~GV~GTPTffI-NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
...|..+.|++|| ||..+. .++.+++.+.++++..-.
T Consensus 49 ~~~G~~tVP~I~i~Dg~~l~----~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 49 VNGGNRTVPTVKFADGSTLT----NPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp HSSSSSCSCEEEETTSCEEE----SCCHHHHHHHHHHHHCCS
T ss_pred HcCCCCEeCEEEEeCCEEEe----CCCHHHHHHHHHHhcCCc
Confidence 3458889999999 677775 345799999888876533
No 195
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=86.88 E-value=0.5 Score=33.41 Aligned_cols=30 Identities=17% Similarity=0.399 Sum_probs=23.1
Q ss_pred hhcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 107 SATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 107 a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.+..|+.+.|++||||+.+-| ++++.++.+
T Consensus 87 ~~~~g~~tVP~vfi~g~~igG------~d~l~~l~~ 116 (129)
T 3ctg_A 87 EEISGQKTVPNVYINGKHIGG------NSDLETLKK 116 (129)
T ss_dssp HHHHSCCSSCEEEETTEEEES------HHHHHHHHH
T ss_pred HHHhCCCCCCEEEECCEEEcC------HHHHHHHHH
Confidence 344588999999999999854 777776644
No 196
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=86.63 E-value=1.2 Score=34.01 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=32.3
Q ss_pred HHhhcCCccccceEEE--C------CEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 105 KFSATRGVYATPTFFV--N------GFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--N------G~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
..+++.||+|+||+++ + |..+. . .+.+.+++.+.|.+.+....
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~-~-~g~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 80 AVCRDFNIPGFPTVRFFXAFTXNGSGAVFP-V-AGADVQTLRERLIDALESHH 130 (244)
T ss_dssp HHHHHTTCCSSSEEEEECTTCCSSSCEECC-C-TTCCHHHHHHHHHHHHHTCT
T ss_pred HHHHHcCCCccCEEEEEeCCCcCCCCeeEe-c-CCCCHHHHHHHHHHHHHhcc
Confidence 4578899999999988 4 34332 2 23579999999999997654
No 197
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=85.94 E-value=0.78 Score=31.37 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=22.0
Q ss_pred hcCCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 108 ATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 108 ~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
+..|..+.|++||||+.+-| ++++.++-+
T Consensus 64 ~~~g~~tvP~vfi~g~~igG------~d~l~~l~~ 92 (114)
T 3h8q_A 64 EITNQKTVPNIFVNKVHVGG------CDQTFQAYQ 92 (114)
T ss_dssp HHHSCCSSCEEEETTEEEES------HHHHHHHHH
T ss_pred HHhCCCccCEEEECCEEEeC------HHHHHHHHH
Confidence 34578999999999999854 676666543
No 198
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=85.46 E-value=0.39 Score=39.01 Aligned_cols=41 Identities=10% Similarity=0.153 Sum_probs=31.4
Q ss_pred HHhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
..+++.||.|+||+++ ||+.. ...+..+.+++.+.+...+.
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~g~~~-~~~G~~~~~~l~~~i~~~~~ 122 (350)
T 1sji_A 80 KLAKKLGFDEEGSLYVLKGDRTI-EFDGEFAADVLVEFLLDLIE 122 (350)
T ss_dssp HHHHHHTCCSTTEEEEEETTEEE-EECSCCCHHHHHHHHHTTSS
T ss_pred HHHHhcCCCccceEEEEECCcEE-EecCCCCHHHHHHHHHHhcC
Confidence 3578889999999988 89864 23346679999998877653
No 199
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=85.09 E-value=0.38 Score=33.43 Aligned_cols=32 Identities=13% Similarity=0.008 Sum_probs=23.4
Q ss_pred hhcCCccccceE--EECCEEecCCCCCCCHHHHHHHH
Q 031378 107 SATRGVYATPTF--FVNGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 107 a~~~GV~GTPTf--fING~~~~ga~s~~~~e~~~~~I 141 (160)
+.+.|++ +|++ |+||+.+.. +.++.++++++|
T Consensus 73 ~~~ygv~-VP~l~~~~dG~~v~~--g~~~~~~L~~~L 106 (107)
T 2fgx_A 73 TRLYNDR-VPVLFAVNEDKELCH--YFLDSDVIGAYL 106 (107)
T ss_dssp HHHSTTS-CSEEEETTTTEEEEC--SSCCCHHHHHHH
T ss_pred HHHhCCC-CceEEEEECCEEEEe--cCCCHHHHHHHh
Confidence 4457887 9999 789998731 246678887766
No 200
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=85.04 E-value=0.44 Score=36.73 Aligned_cols=38 Identities=13% Similarity=0.036 Sum_probs=25.3
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCC-------CCHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSP-------LDYNGWRKVIDP 143 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~-------~~~e~~~~~Id~ 143 (160)
.+.+++|.++||+++ ||..+....+. ++.+++.++|..
T Consensus 164 l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 164 AGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp CSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred HHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 567899999999888 99876322221 223666666654
No 201
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=84.44 E-value=0.71 Score=37.04 Aligned_cols=42 Identities=12% Similarity=-0.058 Sum_probs=30.7
Q ss_pred HHHhhcCCccccceEEE--CCE-----------------EecCCCCCCCHHHHHHHHHHHh
Q 031378 104 FKFSATRGVYATPTFFV--NGF-----------------SLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI--NG~-----------------~~~ga~s~~~~e~~~~~Id~~l 145 (160)
-..++++||.|+||+++ +|. ......+..+.+++.+++...+
T Consensus 81 ~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 81 KALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp HHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred HHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 34578899999999998 775 1122334667999999988776
No 202
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=83.67 E-value=0.83 Score=39.39 Aligned_cols=38 Identities=21% Similarity=0.278 Sum_probs=29.4
Q ss_pred HHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHH
Q 031378 105 KFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 105 k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
..+.+.||.++||+++||+.+.. +..+.+++.+.++..
T Consensus 161 ~~~~~~~i~svPt~~i~g~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 161 NEITERNVMGVPAVFVNGKEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp HHHHHTTCCSSSEEEETTEEEEE--SCCCHHHHHHHHCCS
T ss_pred HHHHHhCCCccCEEEECCEEEec--CCCCHHHHHHHHhhc
Confidence 35788899999999999988732 344588888887664
No 203
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=83.51 E-value=0.67 Score=32.70 Aligned_cols=37 Identities=16% Similarity=0.065 Sum_probs=25.7
Q ss_pred ccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 112 VYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 112 V~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
|.++|+.+| ||+++.-..+..+.+++.+.|++++++|
T Consensus 130 i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 130 IKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHCC
T ss_pred ccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhccC
Confidence 555675555 7888643334556899999999998754
No 204
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=83.12 E-value=1.3 Score=32.01 Aligned_cols=42 Identities=5% Similarity=-0.118 Sum_probs=29.7
Q ss_pred hhcCCc--cccceEEE---CCEEecCCCC----------CCCHHHHHHHHHHHhhhc
Q 031378 107 SATRGV--YATPTFFV---NGFSLAGAGS----------PLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV--~GTPTffI---NG~~~~ga~s----------~~~~e~~~~~Id~~l~~~ 148 (160)
+...++ .++||+++ ||+.+.-..+ ..+.+++.+.|++++...
T Consensus 94 ~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 94 DEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp CGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHH
T ss_pred HHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhc
Confidence 344566 66999976 7887643333 367899999999988544
No 205
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=82.94 E-value=1 Score=35.38 Aligned_cols=41 Identities=10% Similarity=0.154 Sum_probs=30.2
Q ss_pred HHhhcCCcc--ccceEEE--CCE--EecCCCCCCCHHHHHHHHHHHh
Q 031378 105 KFSATRGVY--ATPTFFV--NGF--SLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 105 k~a~~~GV~--GTPTffI--NG~--~~~ga~s~~~~e~~~~~Id~~l 145 (160)
..+++.||+ |.||+++ ||. ......+..+.+++.++|+...
T Consensus 72 ~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 72 ELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp HHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 357889999 9999998 887 1222334566999999998763
No 206
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=82.77 E-value=0.69 Score=34.69 Aligned_cols=36 Identities=8% Similarity=0.087 Sum_probs=23.2
Q ss_pred CCccccceEEE---CCEEecCC-----CCCCCHHHHHHHHHHHh
Q 031378 110 RGVYATPTFFV---NGFSLAGA-----GSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 110 ~GV~GTPTffI---NG~~~~ga-----~s~~~~e~~~~~Id~~l 145 (160)
.||.|+||+++ +|+++.+. .+.++.++|.++|+...
T Consensus 100 ~gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 100 LGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp HSCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred cCCCCCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 49999999988 78887541 11234455666665543
No 207
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=81.89 E-value=1.3 Score=28.98 Aligned_cols=25 Identities=8% Similarity=0.191 Sum_probs=20.4
Q ss_pred ccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 112 VYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 112 V~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
....|.+||||+.+-| ++++.++.+
T Consensus 58 ~~~vP~ifi~g~~igG------~d~l~~l~~ 82 (93)
T 1t1v_A 58 KATPPQIVNGNHYCGD------YELFVEAVE 82 (93)
T ss_dssp TCCSCEEEETTEEEEE------HHHHHHHHH
T ss_pred CCCCCEEEECCEEEeC------HHHHHHHHh
Confidence 7899999999998854 788777654
No 208
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=81.82 E-value=0.99 Score=30.53 Aligned_cols=27 Identities=19% Similarity=0.297 Sum_probs=21.0
Q ss_pred CCccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 110 RGVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 110 ~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
.|..+.|++||||+.+-| ++++.++.+
T Consensus 66 ~g~~~vP~ifi~g~~igG------~d~l~~l~~ 92 (109)
T 1wik_A 66 SNWPTYPQLYVRGDLVGG------LDIVKELKD 92 (109)
T ss_dssp HSCCSSCEEECSSSEEEC------HHHHHHHHH
T ss_pred hCCCCCCEEEECCEEEcC------HHHHHHHHH
Confidence 478899999999998854 676666544
No 209
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=81.74 E-value=1 Score=32.84 Aligned_cols=44 Identities=18% Similarity=0.108 Sum_probs=31.2
Q ss_pred HhhcCCcc------ccceEEE---CCEEec---CCC-CCCCHHHHHHHHHHHhhhcC
Q 031378 106 FSATRGVY------ATPTFFV---NGFSLA---GAG-SPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 106 ~a~~~GV~------GTPTffI---NG~~~~---ga~-s~~~~e~~~~~Id~~l~~~~ 149 (160)
.++.+||. ++|+++| ||+.+. |.. ...+.+++.+.|+.+.....
T Consensus 104 ~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~ 160 (187)
T 1we0_A 104 ISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRE 160 (187)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHHHHT
T ss_pred HHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhhhh
Confidence 35667888 9999888 788764 211 12368999999999886543
No 210
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=81.25 E-value=1.3 Score=35.96 Aligned_cols=28 Identities=11% Similarity=0.075 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHhhcCC-ccccceEEEC
Q 031378 94 RSTDLLTRVSFKFSATRG-VYATPTFFVN 121 (160)
Q Consensus 94 ~~~~~~i~~~~k~a~~~G-V~GTPTffIN 121 (160)
....+++....+..++.| |+||||++.-
T Consensus 235 ~d~~~~v~~~~~~~~~~G~i~gtP~ii~~ 263 (273)
T 3tdg_A 235 EDLRTKVENTTKKIFESGVIKGVPFLYHY 263 (273)
T ss_dssp HHHHHHHHHHHHHHHSSSSSCSSSEEEEC
T ss_pred hHHHHHHHHHHHHHHHcCCcccCcEEEec
Confidence 334557888899999999 9999999983
No 211
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=81.08 E-value=1.9 Score=37.64 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=32.2
Q ss_pred HHhhcCCccccceEEE--C----CEEecCCCCCCCHHHHHHHHHHHhhhcC
Q 031378 105 KFSATRGVYATPTFFV--N----GFSLAGAGSPLDYNGWRKVIDPLLSEKG 149 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--N----G~~~~ga~s~~~~e~~~~~Id~~l~~~~ 149 (160)
..+++.||.|+||+++ + |.......++.+.+++.+.|++.+....
T Consensus 80 ~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 80 AVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp HHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 4578899999999998 3 2211112235679999999999997653
No 212
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=80.42 E-value=1.9 Score=29.27 Aligned_cols=26 Identities=12% Similarity=0.189 Sum_probs=20.3
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
|....|.+||||+.+-| ++++.++.+
T Consensus 70 g~~tvP~ifi~g~~iGG------~d~l~~l~~ 95 (109)
T 3ipz_A 70 NWPTFPQLYIGGEFFGG------CDITLEAFK 95 (109)
T ss_dssp TCSSSCEEEETTEEEEC------HHHHHHHHH
T ss_pred CCCCCCeEEECCEEEeC------HHHHHHHHH
Confidence 77899999999999854 676665543
No 213
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.11 E-value=0.11 Score=36.27 Aligned_cols=36 Identities=14% Similarity=-0.033 Sum_probs=21.9
Q ss_pred HhhcCCcc------ccceEEE--CCEEecCCCCCCCHHHHHHHH
Q 031378 106 FSATRGVY------ATPTFFV--NGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 106 ~a~~~GV~------GTPTffI--NG~~~~ga~s~~~~e~~~~~I 141 (160)
.++++||. ++||+++ ||+.+.-..+..+.+++.++|
T Consensus 73 ~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l 116 (137)
T 2dj0_A 73 VSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWT 116 (137)
T ss_dssp HHHHTTCCCCSSSSCSSEEEEESSSSEEEEESCBCSSSCBCCCC
T ss_pred HHHHccCcccCCcCCCCEEEEEECCEEEEEecCcCchHHHHHHH
Confidence 45678888 9999988 888753222233344444333
No 214
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=78.97 E-value=1.3 Score=34.96 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=27.4
Q ss_pred HhhcCCccccceEEE--CCEEec---CCC----CCCCHHHHHHHHHHH
Q 031378 106 FSATRGVYATPTFFV--NGFSLA---GAG----SPLDYNGWRKVIDPL 144 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~---ga~----s~~~~e~~~~~Id~~ 144 (160)
.+.+++|.|+||+++ ||+.+. |.. ..++.+++.++|...
T Consensus 177 l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 177 AGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp CTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred HHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 467899999999988 898753 331 124566777777664
No 215
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=78.72 E-value=1.4 Score=37.04 Aligned_cols=42 Identities=7% Similarity=0.053 Sum_probs=29.5
Q ss_pred hhcCCccccceEEE--CCEE--ecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 107 SATRGVYATPTFFV--NGFS--LAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 107 a~~~GV~GTPTffI--NG~~--~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
+.++||.|+||+++ +|.. .....+..+.+++.+.|++.+...
T Consensus 418 ~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 463 (481)
T 3f8u_A 418 PSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNP 463 (481)
T ss_dssp CTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSC
T ss_pred HhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCc
Confidence 46789999999998 4432 111223566999999999887543
No 216
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=78.50 E-value=1.7 Score=30.77 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=26.7
Q ss_pred CCccccce-EEE--CCEEec---CCCCCCCHHHHHHHHHHHhhh
Q 031378 110 RGVYATPT-FFV--NGFSLA---GAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 110 ~GV~GTPT-ffI--NG~~~~---ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.++.++|+ |+| ||+++. |.. .++.+++.+.|+++++.
T Consensus 131 ~~~~~~p~~~lid~~G~i~~~~~g~~-~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 131 DQVIHQSSFYLVGPDGKVLKDYNGVE-NTPYDDIISDVKSASTL 173 (174)
T ss_dssp CSCCSCCEEEEECTTSEEEEEEESSS-SCCHHHHHHHHHHHTCC
T ss_pred CeeeeeeEEEEECCCCeEEEEEcCCC-CCCHHHHHHHHHHHHhc
Confidence 57889997 555 788863 322 24589999999998864
No 217
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=78.22 E-value=1.8 Score=31.86 Aligned_cols=43 Identities=19% Similarity=0.094 Sum_probs=29.9
Q ss_pred HhhcCCcc-----ccceEEE---CCEEecCCCC----CCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVY-----ATPTFFV---NGFSLAGAGS----PLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~-----GTPTffI---NG~~~~ga~s----~~~~e~~~~~Id~~l~~~ 148 (160)
.++.+||. ++|++++ ||+.+.-..+ ..+.+++.+.|+++....
T Consensus 109 ~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~ 163 (198)
T 1zof_A 109 ISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFE 163 (198)
T ss_dssp HHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHHhh
Confidence 35678888 9997777 7887642211 235789999999887543
No 218
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=77.88 E-value=1.3 Score=28.40 Aligned_cols=21 Identities=24% Similarity=0.650 Sum_probs=17.0
Q ss_pred ccceEEE-CCEEecCCCCCCCHHHHHHH
Q 031378 114 ATPTFFV-NGFSLAGAGSPLDYNGWRKV 140 (160)
Q Consensus 114 GTPTffI-NG~~~~ga~s~~~~e~~~~~ 140 (160)
+.|++|| ||+.+-| ++++.++
T Consensus 64 tvP~v~i~~g~~igG------~d~l~~~ 85 (87)
T 1aba_A 64 TMPQVFAPDGSHIGG------FDQLREY 85 (87)
T ss_dssp CSCEEECTTSCEEES------HHHHHHH
T ss_pred ccCEEEEECCEEEeC------HHHHHHh
Confidence 8999999 9999854 6776654
No 219
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=77.78 E-value=0.83 Score=32.16 Aligned_cols=37 Identities=14% Similarity=0.158 Sum_probs=26.1
Q ss_pred HHhhcCCccc-cceEEE--CCEEecCC-CCCCCHHHHHHHH
Q 031378 105 KFSATRGVYA-TPTFFV--NGFSLAGA-GSPLDYNGWRKVI 141 (160)
Q Consensus 105 k~a~~~GV~G-TPTffI--NG~~~~ga-~s~~~~e~~~~~I 141 (160)
..|.+.||.+ .|||++ ||+.+-.+ .+..+.+++.+.+
T Consensus 71 ~IA~~~~V~h~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 71 YIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHHHHTCCCCSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred HHHHHhCCccCCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 3589999995 999999 99987532 2344566665543
No 220
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=77.37 E-value=3.3 Score=31.96 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=29.1
Q ss_pred HHhhcCCccccceEEE-CC-EEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 105 KFSATRGVYATPTFFV-NG-FSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 105 k~a~~~GV~GTPTffI-NG-~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
..+.++||++.|||.+ || ..+.|..+ .+++.+++...+..
T Consensus 77 ~~~~~~gv~~~Pt~~i~~g~~~~~G~~~---~~~l~~fv~~~l~~ 118 (243)
T 2hls_A 77 DKFSEFKVERVPTVAFLGGEVRWTGIPA---GEEIRALVEVIMRL 118 (243)
T ss_dssp HHHHHTTCCSSSEEEETTTTEEEESCCC---TTHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCCEEEEECCceeEcCCCc---HHHHHHHHHHHHhc
Confidence 3478899999999999 54 44556544 67888888877643
No 221
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=78.94 E-value=0.47 Score=33.38 Aligned_cols=44 Identities=5% Similarity=-0.037 Sum_probs=29.8
Q ss_pred HhhcCC--ccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 106 FSATRG--VYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 106 ~a~~~G--V~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
.++.+| +.|+|++++ ||+.+... .+.+.+++.++|+.+.....+
T Consensus 104 ~~~~~~~~~~~~P~~~lid~~G~i~~~~-~g~~~~~l~~~l~~l~~~~~~ 152 (159)
T 2ls5_A 104 IFAKYALRDAGITRNVLIDREGKIVKLT-RLYNEEEFASLVQQINEMLKE 152 (159)
Confidence 456677 678999887 78876432 234567788888887766533
No 222
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=76.61 E-value=0.54 Score=33.29 Aligned_cols=37 Identities=19% Similarity=0.010 Sum_probs=25.4
Q ss_pred hcCCccccceEEE--CCEEecCCCCCC--CHHHHHHHHHHH
Q 031378 108 ATRGVYATPTFFV--NGFSLAGAGSPL--DYNGWRKVIDPL 144 (160)
Q Consensus 108 ~~~GV~GTPTffI--NG~~~~ga~s~~--~~e~~~~~Id~~ 144 (160)
...+|.++|++++ ||+.+.-..+.. +.+++.+.|+++
T Consensus 131 ~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 131 GEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp TEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred CCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 3456889999888 898764322222 577888877765
No 223
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=76.60 E-value=1.1 Score=32.37 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=25.9
Q ss_pred CCccccceEEE---CCEEec---CCCCCCCHHHHHHHHHHHhhhc
Q 031378 110 RGVYATPTFFV---NGFSLA---GAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 110 ~GV~GTPTffI---NG~~~~---ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++.++|+++| ||+.+. |. ..++.+++.+.|+.++.++
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~-~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGP-AEWASEDALKLIRAATGKA 182 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESC-CCTTSHHHHHHHHHHHC--
T ss_pred cccCCCCEEEEECCCCCEEEEEecC-CccCHHHHHHHHHHHhccc
Confidence 34569998776 787753 32 2345789999999998653
No 224
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=76.43 E-value=2.4 Score=30.02 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=24.2
Q ss_pred HHhhcCCccc----cceEEE---CCEEec---C-CCCCCCHHHHHHHHHHH
Q 031378 105 KFSATRGVYA----TPTFFV---NGFSLA---G-AGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 105 k~a~~~GV~G----TPTffI---NG~~~~---g-a~s~~~~e~~~~~Id~~ 144 (160)
..++.+||.| +|+.+| ||+++. | .......+++.+.|+++
T Consensus 97 ~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 97 KIRELYGAKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp HHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 3467889999 996665 688743 3 22333355555555554
No 225
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=75.89 E-value=2.7 Score=29.50 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=23.7
Q ss_pred HhhcCCccc------------cceEEE---CCEEe---cCCCCCCCHHHHHHHHHHH
Q 031378 106 FSATRGVYA------------TPTFFV---NGFSL---AGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 106 ~a~~~GV~G------------TPTffI---NG~~~---~ga~s~~~~e~~~~~Id~~ 144 (160)
.++.+||.+ +|+.|| ||++. .+.......+++.+.|+++
T Consensus 104 ~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 104 LCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp HHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred HHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 356677776 998887 78876 3333333455555555554
No 226
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=75.81 E-value=1.8 Score=36.72 Aligned_cols=37 Identities=11% Similarity=-0.026 Sum_probs=27.7
Q ss_pred CCccccceEEE--CCEE--ecCCCCCCCHHHHHHHHHHHhh
Q 031378 110 RGVYATPTFFV--NGFS--LAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 110 ~GV~GTPTffI--NG~~--~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
.||.|+||+++ +|.. .....+..+.+++.++|+..+.
T Consensus 427 ~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 427 VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp CCCSSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred CCceecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCC
Confidence 79999999988 7754 2223345679999999998764
No 227
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=75.48 E-value=3 Score=28.96 Aligned_cols=26 Identities=15% Similarity=0.189 Sum_probs=20.0
Q ss_pred CCccccceEEECCEEecCCCCCCCHHHHHHHH
Q 031378 110 RGVYATPTFFVNGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 110 ~GV~GTPTffING~~~~ga~s~~~~e~~~~~I 141 (160)
.|...+|.+||||+.+-| ++++.++.
T Consensus 70 sg~~tvP~vfI~g~~iGG------~d~l~~l~ 95 (121)
T 3gx8_A 70 SEWPTIPQLYVNKEFIGG------CDVITSMA 95 (121)
T ss_dssp HTCCSSCEEEETTEEEES------HHHHHHHH
T ss_pred hCCCCCCeEEECCEEEec------HHHHHHHH
Confidence 377889999999999854 67666643
No 228
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=75.43 E-value=0.89 Score=40.84 Aligned_cols=40 Identities=13% Similarity=0.243 Sum_probs=22.3
Q ss_pred HhhcCCccccceEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVYATPTFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+++.||.|+||+++ ||..+....+..+.+++.+.+...+
T Consensus 179 l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 220 (780)
T 3apo_A 179 LCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHV 220 (780)
T ss_dssp CC--------CEEEEECTTSCCEECCSCSCHHHHHHHHHTTS
T ss_pred HHHHcCCceeeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhc
Confidence 467899999999999 8875333334566889888887665
No 229
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=75.22 E-value=1.6 Score=32.91 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=26.4
Q ss_pred CccccceEEE---CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 111 GVYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 111 GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
+|.++|+.|| ||+++.-..+..+.+++.+.|+++++
T Consensus 169 ~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 169 DVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp CCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHC
T ss_pred ccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHHhh
Confidence 4778886666 78886533345668999999998874
No 230
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=74.79 E-value=3 Score=29.79 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=15.0
Q ss_pred CccccceEEECCEEecC
Q 031378 111 GVYATPTFFVNGFSLAG 127 (160)
Q Consensus 111 GV~GTPTffING~~~~g 127 (160)
|..+.|.+||||+.+-|
T Consensus 87 G~~tvP~VfI~G~~iGG 103 (135)
T 2wci_A 87 NWPTFPQLWVDGELVGG 103 (135)
T ss_dssp TCCSSCEEEETTEEEES
T ss_pred CCCCcCEEEECCEEEEC
Confidence 77899999999999854
No 231
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=74.37 E-value=2.8 Score=28.64 Aligned_cols=26 Identities=15% Similarity=0.277 Sum_probs=21.2
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
|....|.+||||+.+-| ++++.++.+
T Consensus 68 g~~tvP~ifi~g~~iGG------~d~l~~l~~ 93 (111)
T 3zyw_A 68 SWPTYPQLYVSGELIGG------LDIIKELEA 93 (111)
T ss_dssp TCCSSCEEEETTEEEEC------HHHHHHHHH
T ss_pred CCCCCCEEEECCEEEec------HHHHHHHHH
Confidence 67889999999999854 777777665
No 232
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=73.99 E-value=1.6 Score=30.68 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=26.7
Q ss_pred CCc--cccc----eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 110 RGV--YATP----TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 110 ~GV--~GTP----TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.|| .++| +|+| ||+++.-..+..+.+++.+.|+++++.
T Consensus 124 ~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (170)
T 2p5q_A 124 WGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEI 169 (170)
T ss_dssp HHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTC
T ss_pred CCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhc
Confidence 356 6778 5666 688765334456689999999998753
No 233
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.88 E-value=2.1 Score=29.20 Aligned_cols=26 Identities=15% Similarity=0.254 Sum_probs=20.9
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
|....|.+||||+.+-| ++++.++.+
T Consensus 69 g~~tvP~vfi~g~~iGG------~d~l~~l~~ 94 (111)
T 2ct6_A 69 GNPLPPQIFNGDRYCGD------YDSFFESKE 94 (111)
T ss_dssp SSCCSCEEEETTEEEEE------HHHHHHHHT
T ss_pred CCCCCCEEEECCEEEeC------HHHHHHHHH
Confidence 88899999999998854 777776644
No 234
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=73.80 E-value=1.8 Score=30.37 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=15.8
Q ss_pred HhhcCCccccceEEE---CCEEec
Q 031378 106 FSATRGVYATPTFFV---NGFSLA 126 (160)
Q Consensus 106 ~a~~~GV~GTPTffI---NG~~~~ 126 (160)
.++.+||.++|+++| ||+++.
T Consensus 107 ~~~~~~v~~~P~~~lid~~G~i~~ 130 (158)
T 3hdc_A 107 VQQRYGANRLPDTFIVDRKGIIRQ 130 (158)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEE
T ss_pred HHHHhCCCCcceEEEEcCCCCEEE
Confidence 467789999999555 787653
No 235
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=73.77 E-value=0.87 Score=40.92 Aligned_cols=43 Identities=14% Similarity=0.010 Sum_probs=31.3
Q ss_pred HhhcCCccccceEEE--CCEEe---cCCC-CCCCHHHHHHHHHHHhhhc
Q 031378 106 FSATRGVYATPTFFV--NGFSL---AGAG-SPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 106 ~a~~~GV~GTPTffI--NG~~~---~ga~-s~~~~e~~~~~Id~~l~~~ 148 (160)
.++++||.|+||+++ ||+.+ .|.. +.++.+++.+.|++.+.+.
T Consensus 721 ~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~~ 769 (780)
T 3apo_A 721 TCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETL 769 (780)
T ss_dssp HHHHTTCCSSSEEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHTTC-
T ss_pred HHHhcCCCcCCEEEEEcCCCccccccCcccCCcCHHHHHHHHHHHHHHh
Confidence 567899999999988 66543 2311 1456999999999998654
No 236
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=73.62 E-value=2.8 Score=29.62 Aligned_cols=26 Identities=31% Similarity=0.469 Sum_probs=19.9
Q ss_pred CCccccceEEECCEEecCCCCCCCHHHHHHHH
Q 031378 110 RGVYATPTFFVNGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 110 ~GV~GTPTffING~~~~ga~s~~~~e~~~~~I 141 (160)
.|....|++||||+.+-| ++++.++-
T Consensus 66 ~G~~tVP~IfI~G~~IGG------~ddl~~l~ 91 (127)
T 3l4n_A 66 TGRGTVPNLLVNGVSRGG------NEEIKKLH 91 (127)
T ss_dssp HSCCSSCEEEETTEECCC------HHHHHHHH
T ss_pred cCCCCcceEEECCEEEcC------HHHHHHHH
Confidence 477899999999998843 67666543
No 237
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=71.22 E-value=2.5 Score=31.05 Aligned_cols=40 Identities=30% Similarity=0.296 Sum_probs=28.4
Q ss_pred hhcCCcc-----ccceEEE---CCEEec---CCC-CCCCHHHHHHHHHHHhh
Q 031378 107 SATRGVY-----ATPTFFV---NGFSLA---GAG-SPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 107 a~~~GV~-----GTPTffI---NG~~~~---ga~-s~~~~e~~~~~Id~~l~ 146 (160)
++.+||. ++|+++| ||+++. |.. ...+.+++.+.|+.+..
T Consensus 119 ~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 119 SQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred HHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 4567787 9998777 788754 221 12368999999998874
No 238
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=70.62 E-value=4.7 Score=28.00 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=19.8
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHHH
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~I 141 (160)
|-...|.+||||+.+-| ++++.++-
T Consensus 73 g~~tvP~vfI~g~~IGG------~d~l~~l~ 97 (118)
T 2wem_A 73 NWPTIPQVYLNGEFVGG------CDILLQMH 97 (118)
T ss_dssp TCCSSCEEEETTEEEES------HHHHHHHH
T ss_pred CCCCcCeEEECCEEEeC------hHHHHHHH
Confidence 67889999999999854 67666643
No 239
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=69.11 E-value=3.5 Score=30.04 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=26.9
Q ss_pred hcCCccccc---e-EEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 108 ATRGVYATP---T-FFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 108 ~~~GV~GTP---T-ffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
...|+.+.| + |+| ||+++.-..+..+.+++.+.|+++|.+.
T Consensus 139 ~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 139 GILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp CSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC---
T ss_pred CccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 455666777 4 555 7887643334556899999999998753
No 240
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=69.06 E-value=3.6 Score=31.28 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=24.8
Q ss_pred HHHhhcCCccccceEEE---CCEEecCCCCCCCHHHHHHHHH
Q 031378 104 FKFSATRGVYATPTFFV---NGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id 142 (160)
-..+++.||+++||+++ ||....-....-+-+....+++
T Consensus 195 ~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 195 ANVVRKFGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp HHHHHHHTCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHH
T ss_pred HHHHHHcCCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHH
Confidence 45678899999999977 8887654333223333444443
No 241
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=68.56 E-value=2.4 Score=34.08 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=25.6
Q ss_pred hhcCCccccceEEE--CC--EEecCCCCCCCHHHHHHHHHHH
Q 031378 107 SATRGVYATPTFFV--NG--FSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 107 a~~~GV~GTPTffI--NG--~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
+++.||+|+||+++ +| +......+..+.+++.++|++.
T Consensus 314 ~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 314 VEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp CSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred hhhcCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 46789999999988 34 3222223356699988887654
No 242
>2r2c_A 28 kDa outer membrane protein OMP28; lipoprotein, structural genomics, PSI, MCSG, protein initiative; 1.80A {Porphyromonas gingivalis}
Probab=67.84 E-value=0.22 Score=37.81 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=6.1
Q ss_pred HHHhhcCCccc-cceEEECCEEecCCCC-CCCHHHHHHHHHHHhhh
Q 031378 104 FKFSATRGVYA-TPTFFVNGFSLAGAGS-PLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 104 ~k~a~~~GV~G-TPTffING~~~~ga~s-~~~~e~~~~~Id~~l~~ 147 (160)
..|++++|+.| +|+++||+....+... +.+.+.|...|++.++.
T Consensus 6 ~~y~~~~~~~g~~P~~~vNR~~~~~~~~~~~~~~~~~~~i~~~l~~ 51 (183)
T 2r2c_A 6 DAYYSKFANNTPLPALMVSRKKFGSSYVYDKSYKTWDVPIAEQMEQ 51 (183)
T ss_dssp ------------------------------CEECBCCCCCC-----
T ss_pred HHHHHHHCCCCCCCEEEEeCCccccccccccchhHHHHHHHHHHcc
Confidence 46789999998 9999999997643110 11236676666666543
No 243
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=67.37 E-value=3.8 Score=31.09 Aligned_cols=28 Identities=25% Similarity=0.476 Sum_probs=21.5
Q ss_pred hcCCccccceEEECCEEecCCCCCCCHHHHHHHH
Q 031378 108 ATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVI 141 (160)
Q Consensus 108 ~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~I 141 (160)
+..|..+.|++++||+.+-| .+++.+++
T Consensus 213 ~~~g~~~vP~~~~~g~~i~g------~~~i~~~l 240 (241)
T 1nm3_A 213 AVSGRTTVPQVFIGGKHIGG------SDDLEKYF 240 (241)
T ss_dssp HHTCCSSSCEEEETTEEEES------HHHHHHC-
T ss_pred HHhCCCCcCEEEECCEEEEC------HHHHHHHh
Confidence 45688999999999998854 67776654
No 244
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=67.25 E-value=2.9 Score=29.90 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=18.5
Q ss_pred HHHhhcCCccccceEEE---C-CEEec
Q 031378 104 FKFSATRGVYATPTFFV---N-GFSLA 126 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI---N-G~~~~ 126 (160)
-..++++||.++||++| + |+++.
T Consensus 118 ~~l~~~~~v~~~Pt~~lid~~~G~iv~ 144 (165)
T 3s9f_A 118 EALTKKYSVESIPTLIGLNADTGDTVT 144 (165)
T ss_dssp HHHHHHTTCCSSSEEEEEETTTCCEEE
T ss_pred HHHHHHcCCCCCCEEEEEeCCCCEEEe
Confidence 34578899999999998 4 88874
No 245
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=63.53 E-value=12 Score=28.05 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=30.2
Q ss_pred HhhcCCcc------ccceEEE---CCEEec---CC-CCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVY------ATPTFFV---NGFSLA---GA-GSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~------GTPTffI---NG~~~~---ga-~s~~~~e~~~~~Id~~l~ 146 (160)
.++.+||. ++|++|| ||++.. +. ....+.+++.+.|+++..
T Consensus 132 i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 132 ISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 36678888 9999998 787753 22 223568999999998874
No 246
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=63.17 E-value=8.1 Score=27.32 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=23.3
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHH-----HHHHhh
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKV-----IDPLLS 146 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~-----Id~~l~ 146 (160)
|....|.+||||+.+-| ++++.++ |+++|.
T Consensus 61 G~~tvPQIFi~~~~iGG------~Dd~~~l~e~g~L~~lL~ 95 (121)
T 1u6t_A 61 GYPLPPQIFNESQYRGD------YDAFFEARENNAVYAFLG 95 (121)
T ss_dssp SSCCSCEEEETTEEEEE------HHHHHHHHHTTCHHHHHT
T ss_pred CCcCCCEEEECCEEEec------hHHHHHhhhhChHHHHHc
Confidence 88899999999999843 7777766 556664
No 247
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=63.17 E-value=2.1 Score=31.03 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=24.1
Q ss_pred Cccccc--------eEEE--CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 111 GVYATP--------TFFV--NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 111 GV~GTP--------TffI--NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
++.++| +|+| ||+++.-..+..+.+++.+.|+++|
T Consensus 136 ~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 136 LAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp HHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred hhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 356778 6677 7887643334556889988888765
No 248
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=62.19 E-value=6.4 Score=30.98 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=29.2
Q ss_pred HHhhcCCcc--ccceEEE-CCE---EecCC--CCCCCHHHHHHHHHHHhh
Q 031378 105 KFSATRGVY--ATPTFFV-NGF---SLAGA--GSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 105 k~a~~~GV~--GTPTffI-NG~---~~~ga--~s~~~~e~~~~~Id~~l~ 146 (160)
..+.+.||+ |.||+++ .|. +. .. .+..+.+++.++|+..+.
T Consensus 84 ~la~~~~V~~~~~PTl~~F~G~~~~~~-~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 84 ALGDRYKVDDKNFPSIFLFKGNADEYV-QLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp HHHHHTTCCTTSCCEEEEESSSSSSEE-ECCTTSCCCHHHHHHHHHHHSS
T ss_pred HHHHHhCCCcCCCCeEEEEeCCcCcce-eecccCCCCHHHHHHHHHHhhc
Confidence 347889999 9999987 343 22 11 235669999999998754
No 249
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=65.41 E-value=1.7 Score=29.48 Aligned_cols=22 Identities=18% Similarity=0.495 Sum_probs=18.0
Q ss_pred HHhhcCCccccceEEE---CCEEec
Q 031378 105 KFSATRGVYATPTFFV---NGFSLA 126 (160)
Q Consensus 105 k~a~~~GV~GTPTffI---NG~~~~ 126 (160)
..++++||.++||+++ ||+.+.
T Consensus 99 ~~~~~~~v~~~P~~~lid~~G~i~~ 123 (143)
T 2lus_A 99 NVTAKYGITGIPALVIVKKDGTLIS 123 (143)
Confidence 4578899999999988 688763
No 250
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=60.86 E-value=10 Score=28.46 Aligned_cols=44 Identities=9% Similarity=0.010 Sum_probs=31.4
Q ss_pred HHHhhcCCccccceEEE--CCEEec---------------CCC-CCCCHHHHHHHHHHHhhh
Q 031378 104 FKFSATRGVYATPTFFV--NGFSLA---------------GAG-SPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI--NG~~~~---------------ga~-s~~~~e~~~~~Id~~l~~ 147 (160)
-..+.++||.|.||+++ +|..-. -.. .+.+.+++.++|.+.+..
T Consensus 93 ~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~ 154 (178)
T 3ga4_A 93 PQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNI 154 (178)
T ss_dssp HHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCC
Confidence 45588999999999998 664221 001 256789999999887753
No 251
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=58.99 E-value=6.2 Score=27.35 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=22.3
Q ss_pred hhcCCcc----ccc---eEEE--CCEEec---CCCC-CCCHHHHHHHHHH
Q 031378 107 SATRGVY----ATP---TFFV--NGFSLA---GAGS-PLDYNGWRKVIDP 143 (160)
Q Consensus 107 a~~~GV~----GTP---TffI--NG~~~~---ga~s-~~~~e~~~~~Id~ 143 (160)
++.+||. |+| +|+| ||+++. |..+ ....+++.+.|++
T Consensus 108 ~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 108 SQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp HHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred HHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 5667888 999 6666 688753 3221 1245556555554
No 252
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=58.37 E-value=11 Score=27.68 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=20.3
Q ss_pred cce-EEE--CCEEecCCCCCCCHHHHHHHHHHHhhh
Q 031378 115 TPT-FFV--NGFSLAGAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 115 TPT-ffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~ 147 (160)
+|+ |+| ||+++.-..+..+.+++.+.|..++..
T Consensus 145 ~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 145 SIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp CCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHH
T ss_pred cceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 345 555 788764333345567777777777754
No 253
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=57.90 E-value=5.4 Score=27.02 Aligned_cols=22 Identities=27% Similarity=0.451 Sum_probs=17.1
Q ss_pred HHhhcCCccccceEEE----CCEEec
Q 031378 105 KFSATRGVYATPTFFV----NGFSLA 126 (160)
Q Consensus 105 k~a~~~GV~GTPTffI----NG~~~~ 126 (160)
..++.+||.++||+++ ||+.+.
T Consensus 99 ~~~~~~~v~~~Pt~~lid~~~G~i~~ 124 (144)
T 1o73_A 99 ELGKTFGVESIPTLITINADTGAIIG 124 (144)
T ss_dssp HHHHHHTCCSSSEEEEEETTTCCEEE
T ss_pred HHHHHcCCCCCCEEEEEECCCCeEEe
Confidence 3467789999999988 477764
No 254
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=57.45 E-value=2.5 Score=30.59 Aligned_cols=33 Identities=18% Similarity=0.042 Sum_probs=20.6
Q ss_pred ccccceEEE---CCEEecCCCCCCCHHHHHHHHHHH
Q 031378 112 VYATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 112 V~GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~ 144 (160)
|.++|+.|| ||+++.-..+..+.+++.+.|+++
T Consensus 147 i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 147 IKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred ccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 455698554 788764333445577777777654
No 255
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=56.94 E-value=6.8 Score=28.44 Aligned_cols=41 Identities=17% Similarity=0.133 Sum_probs=28.9
Q ss_pred HhhcCCcc-----ccceEEE---CCEEecCCC----CCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVY-----ATPTFFV---NGFSLAGAG----SPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~-----GTPTffI---NG~~~~ga~----s~~~~e~~~~~Id~~l~ 146 (160)
.++.+||. ++|++|| ||++..-.. ...+.+++.+.|+++..
T Consensus 107 ~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 159 (192)
T 2h01_A 107 IARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQH 159 (192)
T ss_dssp HHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHHH
T ss_pred HHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Confidence 45677888 8999888 788753211 13457889988988764
No 256
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=56.50 E-value=7.7 Score=29.11 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=28.5
Q ss_pred HhhcCCcc-----ccceEEE---CCEEecCC----CCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVY-----ATPTFFV---NGFSLAGA----GSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~-----GTPTffI---NG~~~~ga----~s~~~~e~~~~~Id~~l~ 146 (160)
.++.+||. ++|++|| ||++..-. ....+.+++.+.|+++..
T Consensus 128 ~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~~ 180 (213)
T 2i81_A 128 ISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQH 180 (213)
T ss_dssp HHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 46678888 8997776 78765321 123468999999998763
No 257
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=54.85 E-value=21 Score=28.44 Aligned_cols=45 Identities=13% Similarity=0.025 Sum_probs=31.9
Q ss_pred HhhcCCccc--cceEEE--CCE---EecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 106 FSATRGVYA--TPTFFV--NGF---SLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 106 ~a~~~GV~G--TPTffI--NG~---~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
.+...||.+ +|++.+ +|. .+.-..+..+.+++.++++..+.++-+
T Consensus 183 ~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~ 234 (361)
T 3uem_A 183 ILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 234 (361)
T ss_dssp HHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSC
T ss_pred HHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCc
Confidence 467789988 999987 322 443112367799999999999976643
No 258
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=52.64 E-value=6.3 Score=28.98 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=27.3
Q ss_pred hhcCCcc------ccceEEE---CCEEec---CCC-CCCCHHHHHHHHHHHhh
Q 031378 107 SATRGVY------ATPTFFV---NGFSLA---GAG-SPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 107 a~~~GV~------GTPTffI---NG~~~~---ga~-s~~~~e~~~~~Id~~l~ 146 (160)
++.+||. ++|++|| +|++.. |.. ...+.+++.+.|+++..
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~~ 165 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQF 165 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhhh
Confidence 4556777 9997666 687653 211 13467999999998873
No 259
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=52.19 E-value=9.8 Score=26.51 Aligned_cols=21 Identities=29% Similarity=0.371 Sum_probs=15.3
Q ss_pred HhhcCCccccc-------eEEE-CCEEec
Q 031378 106 FSATRGVYATP-------TFFV-NGFSLA 126 (160)
Q Consensus 106 ~a~~~GV~GTP-------TffI-NG~~~~ 126 (160)
.++.+||.++| +|+| ||++..
T Consensus 103 ~~~~~gv~~~p~~g~~~~~~li~~G~i~~ 131 (159)
T 2a4v_A 103 FIGLLGAKKTPLSGSIRSHFIFVDGKLKF 131 (159)
T ss_dssp HHHHHTCBSSSSSCBCCEEEEEETTEEEE
T ss_pred HHHHhCCcccccCCccceEEEEcCCEEEE
Confidence 35677899998 6666 888753
No 260
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=51.60 E-value=16 Score=26.17 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=21.6
Q ss_pred hhcCCccc------------cce-EEE--CCEEe---cCCCCCCCHHHHHHHHHHH
Q 031378 107 SATRGVYA------------TPT-FFV--NGFSL---AGAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 107 a~~~GV~G------------TPT-ffI--NG~~~---~ga~s~~~~e~~~~~Id~~ 144 (160)
++.+||.+ +|+ |+| +|++. .+.......+++.+.|+++
T Consensus 121 ~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 121 CKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp HHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred HHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 55667765 464 455 68876 3333334456666666554
No 261
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=51.45 E-value=21 Score=26.70 Aligned_cols=41 Identities=12% Similarity=0.035 Sum_probs=29.4
Q ss_pred hcCCcc--ccceEEE----CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 108 ATRGVY--ATPTFFV----NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 108 ~~~GV~--GTPTffI----NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
..+|+. +.|++.| +++.+.-..+..+.+.+.++++..+.++
T Consensus 181 ~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 181 SFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp HHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred HHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 567887 8899999 3433321124678999999999998765
No 262
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=50.71 E-value=4.9 Score=29.10 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=20.8
Q ss_pred ccceEEE---CCEEecCCCCCCCHHHHHHHHHHHh
Q 031378 114 ATPTFFV---NGFSLAGAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 114 GTPTffI---NG~~~~ga~s~~~~e~~~~~Id~~l 145 (160)
.+|+.|+ ||+++.-..+..+.+++.+.|+++|
T Consensus 151 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 185 (185)
T 2gs3_A 151 WNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 185 (185)
T ss_dssp SSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHHC
T ss_pred ccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHhC
Confidence 3576655 7887643334556788888887764
No 263
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=50.42 E-value=15 Score=25.66 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=24.0
Q ss_pred hhcCCccc------cceEEE---CCEEecCC-----CCCCCHHHHHHHHHHHh
Q 031378 107 SATRGVYA------TPTFFV---NGFSLAGA-----GSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 107 a~~~GV~G------TPTffI---NG~~~~ga-----~s~~~~e~~~~~Id~~l 145 (160)
++.+||.+ +|+.+| ||+.+.-. ....+.+++.+.|++++
T Consensus 114 ~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 114 GEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp HHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred HHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 45677776 587655 68775321 12234678888887765
No 264
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=49.92 E-value=15 Score=27.60 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=23.5
Q ss_pred c-eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 116 P-TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 116 P-TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
| ||+| +|+++.-..+..+.+++.+.|++++.+.
T Consensus 160 ~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll~~~ 195 (207)
T 2r37_A 160 FEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQ 195 (207)
T ss_dssp TCEEEECTTSCEEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhhc
Confidence 5 5777 6887643334566899999999998654
No 265
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=49.41 E-value=11 Score=27.03 Aligned_cols=45 Identities=16% Similarity=0.165 Sum_probs=25.3
Q ss_pred HhhcCCcccc---------ceEEE---CCEEecCCC--CCCCHHHHHHHHHHHhhhcCC
Q 031378 106 FSATRGVYAT---------PTFFV---NGFSLAGAG--SPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 106 ~a~~~GV~GT---------PTffI---NG~~~~ga~--s~~~~e~~~~~Id~~l~~~~~ 150 (160)
.++.+||.++ |+.+| ||+++.-.. +..+.+++.++|+.+.+..+.
T Consensus 111 ~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~~~ 169 (175)
T 1xvq_A 111 FGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATSGS 169 (175)
T ss_dssp HHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC--
T ss_pred HHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhcCc
Confidence 3566777776 65555 788764221 222345677777776655443
No 266
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=49.01 E-value=9.7 Score=25.95 Aligned_cols=23 Identities=26% Similarity=0.244 Sum_probs=17.6
Q ss_pred HHHhhcCCccccceEEE----CCEEec
Q 031378 104 FKFSATRGVYATPTFFV----NGFSLA 126 (160)
Q Consensus 104 ~k~a~~~GV~GTPTffI----NG~~~~ 126 (160)
...++++||.++||+++ ||+.+.
T Consensus 98 ~~~~~~~~v~~~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 98 QKLSKHFNVESIPTLIGVDADSGDVVT 124 (146)
T ss_dssp HHHHHHTTCCSSSEEEEEETTTCCEEE
T ss_pred HHHHHHhCCCCCCEEEEEECCCCeEEE
Confidence 34577889999999887 477764
No 267
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=48.24 E-value=59 Score=22.84 Aligned_cols=44 Identities=14% Similarity=0.037 Sum_probs=32.2
Q ss_pred hhcCCccc--cceEEE-C----CEEecCCCCCCCHHHHHHHHHHHhhhcCC
Q 031378 107 SATRGVYA--TPTFFV-N----GFSLAGAGSPLDYNGWRKVIDPLLSEKGK 150 (160)
Q Consensus 107 a~~~GV~G--TPTffI-N----G~~~~ga~s~~~~e~~~~~Id~~l~~~~~ 150 (160)
...+|+.+ .|++.| + ++++.-..+.++.+.++++++..+.++=+
T Consensus 81 l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 81 LEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp HHHTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred HHHcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 45678886 899977 2 55554223577899999999999987754
No 268
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=48.19 E-value=21 Score=24.91 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=19.4
Q ss_pred CccccceEEECCEEecCCCCCCCHHHHHHHHH
Q 031378 111 GVYATPTFFVNGFSLAGAGSPLDYNGWRKVID 142 (160)
Q Consensus 111 GV~GTPTffING~~~~ga~s~~~~e~~~~~Id 142 (160)
|-.-.|.+||||+.+-| .+++.++.+
T Consensus 73 g~~TvPqIFI~g~~IGG------~Ddl~~l~~ 98 (118)
T 2wul_A 73 NWPTIPQVYLNGEFVGG------CDILLQMHQ 98 (118)
T ss_dssp TCCSSCEEEETTEEEEC------HHHHHHHHH
T ss_pred cCCCCCeEeECCEEECC------HHHHHHHHH
Confidence 33568999999999944 777777644
No 269
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=47.01 E-value=13 Score=26.99 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=26.9
Q ss_pred HhhcCCcc------ccceEEE---CCEEec---CCCC-CCCHHHHHHHHHHHh
Q 031378 106 FSATRGVY------ATPTFFV---NGFSLA---GAGS-PLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~------GTPTffI---NG~~~~---ga~s-~~~~e~~~~~Id~~l 145 (160)
.++.+||. ++|+.|| ||++.. |..+ ..+.+++.+.|+++.
T Consensus 110 ~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 110 LSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 35667887 8996666 687643 2221 456889998888875
No 270
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=46.83 E-value=11 Score=25.52 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=17.1
Q ss_pred HHhhcCCccccceEEE-C---CEEec
Q 031378 105 KFSATRGVYATPTFFV-N---GFSLA 126 (160)
Q Consensus 105 k~a~~~GV~GTPTffI-N---G~~~~ 126 (160)
..++++||.++||+++ | |+.+.
T Consensus 99 ~~~~~~~v~~~P~~~lid~~~G~i~~ 124 (144)
T 1i5g_A 99 FLTTGFDVKSIPTLVGVEADSGNIIT 124 (144)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEEE
T ss_pred HHHHHcCCCCCCEEEEEECCCCcEEe
Confidence 4567889999999877 4 77764
No 271
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=46.27 E-value=31 Score=28.83 Aligned_cols=25 Identities=20% Similarity=0.574 Sum_probs=19.6
Q ss_pred CCccccceEEECCEEecCCCCCCCHHHHHHH
Q 031378 110 RGVYATPTFFVNGFSLAGAGSPLDYNGWRKV 140 (160)
Q Consensus 110 ~GV~GTPTffING~~~~ga~s~~~~e~~~~~ 140 (160)
.|....|.+||||+.+-| ++++.++
T Consensus 314 tG~~TVPqVFI~Gk~IGG------~DdL~~L 338 (362)
T 2jad_A 314 NGQRTVPNIYINGKHIGG------NDDLQEL 338 (362)
T ss_dssp HCCCSSCEEEETTEEEES------HHHHHHH
T ss_pred HCCCCcCEEEECCEEEEC------hHHHHHh
Confidence 488899999999999854 5655554
No 272
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=45.03 E-value=23 Score=30.53 Aligned_cols=44 Identities=16% Similarity=0.263 Sum_probs=27.8
Q ss_pred HHhhcCCccccceEEE--CCEE--e---cCCCC---------CCCHHHHHHHHHHHhhhc
Q 031378 105 KFSATRGVYATPTFFV--NGFS--L---AGAGS---------PLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 105 k~a~~~GV~GTPTffI--NG~~--~---~ga~s---------~~~~e~~~~~Id~~l~~~ 148 (160)
..+++.||.|+||+++ +|.. . .|..+ ..+.+++.+.++.++.++
T Consensus 95 ~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~ 154 (470)
T 3qcp_A 95 DLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKH 154 (470)
T ss_dssp HHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhc
Confidence 4578899999999987 3321 1 12111 144667888888777544
No 273
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=44.21 E-value=32 Score=24.00 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=18.3
Q ss_pred ccce-EEE--CCEEec-----CCCCCCCHHHHHHHHHHH
Q 031378 114 ATPT-FFV--NGFSLA-----GAGSPLDYNGWRKVIDPL 144 (160)
Q Consensus 114 GTPT-ffI--NG~~~~-----ga~s~~~~e~~~~~Id~~ 144 (160)
..|+ |+| +|++.. ...+..+++++.++|+++
T Consensus 118 ~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 118 AKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred eeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 3564 556 687631 222345688888888754
No 274
>3c6f_A YETF protein; uncharacterized protein, predicted membrane protein, protein structure initiative, PSI-2; 2.50A {Bacillus subtilis}
Probab=43.61 E-value=11 Score=27.72 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=20.4
Q ss_pred CccccceEEE-CCEEecCC--CCCCCHHHHHHHHHH
Q 031378 111 GVYATPTFFV-NGFSLAGA--GSPLDYNGWRKVIDP 143 (160)
Q Consensus 111 GV~GTPTffI-NG~~~~ga--~s~~~~e~~~~~Id~ 143 (160)
=+.|.|+.+| ||+....+ ....+.+++...+..
T Consensus 11 ~i~G~P~iLI~~G~i~~~~l~k~rit~~dL~~~LR~ 46 (153)
T 3c6f_A 11 FLEGEPNIVIRKGELQYKVMKKNKIDINQLQSMLRQ 46 (153)
T ss_dssp -----CEEEEETTEECHHHHHHTTCCHHHHHHHHHH
T ss_pred HhCCCcEEEEECCEEcHHHHhHcCCCHHHHHHHHHH
Confidence 3789999999 99987533 235667887777665
No 275
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=43.58 E-value=13 Score=26.51 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=21.9
Q ss_pred cccce-----EEE--CCEEecCCCCCCCHHHHHHHHHHHhh
Q 031378 113 YATPT-----FFV--NGFSLAGAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 113 ~GTPT-----ffI--NG~~~~ga~s~~~~e~~~~~Id~~l~ 146 (160)
.++|+ |+| +|+++.-..+..+.+++.+.|+++|.
T Consensus 130 ~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 130 KKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp TCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred CCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 37886 777 78876433334557777777776663
No 276
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=43.47 E-value=44 Score=23.60 Aligned_cols=42 Identities=19% Similarity=0.239 Sum_probs=24.3
Q ss_pred HhhcCCccc----------cce-EEE--CCEEec-----CCCCCCCHHHHHHHHHHHhhh
Q 031378 106 FSATRGVYA----------TPT-FFV--NGFSLA-----GAGSPLDYNGWRKVIDPLLSE 147 (160)
Q Consensus 106 ~a~~~GV~G----------TPT-ffI--NG~~~~-----ga~s~~~~e~~~~~Id~~l~~ 147 (160)
.++.+||.+ .|+ |+| ||++.. ...+..+++++.+.++++.++
T Consensus 102 v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 102 VIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAGE 161 (164)
T ss_dssp HHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhcc
Confidence 355667643 454 556 687642 122344678887777776543
No 277
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=43.43 E-value=16 Score=25.66 Aligned_cols=20 Identities=20% Similarity=0.268 Sum_probs=13.2
Q ss_pred hhcCCccc------cceEEE---CCEEec
Q 031378 107 SATRGVYA------TPTFFV---NGFSLA 126 (160)
Q Consensus 107 a~~~GV~G------TPTffI---NG~~~~ 126 (160)
++.+||.+ +|+.|| +|++..
T Consensus 115 ~~~~gv~~~~~g~~~p~~~liD~~G~i~~ 143 (166)
T 3p7x_A 115 GENYGVVMEELRLLARAVFVLDADNKVVY 143 (166)
T ss_dssp HHHHTCEETTTTEECCEEEEECTTCBEEE
T ss_pred HHHhCCccccCCceeeEEEEECCCCeEEE
Confidence 45556664 898777 688753
No 278
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=43.20 E-value=27 Score=24.77 Aligned_cols=39 Identities=10% Similarity=-0.011 Sum_probs=25.6
Q ss_pred CCccccceEEE---CCEEecC-CCCCCCHHHHHHHHHHHhhhc
Q 031378 110 RGVYATPTFFV---NGFSLAG-AGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 110 ~GV~GTPTffI---NG~~~~g-a~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++..+|++|| +|++..- ....++.+++.+.|++++...
T Consensus 122 ~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 122 NDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp TEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred CccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 35778895555 7886521 112466888888888887554
No 279
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=40.93 E-value=21 Score=25.80 Aligned_cols=40 Identities=20% Similarity=0.086 Sum_probs=26.8
Q ss_pred hhcCCcc------ccceEEE---CCEEec---CCC-CCCCHHHHHHHHHHHhh
Q 031378 107 SATRGVY------ATPTFFV---NGFSLA---GAG-SPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 107 a~~~GV~------GTPTffI---NG~~~~---ga~-s~~~~e~~~~~Id~~l~ 146 (160)
++.+||. .+|+.|| +|++.. +.. ...+.+++.+.|+.+..
T Consensus 104 ~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 104 TRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 4556665 3798887 787653 211 13468999999998875
No 280
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=39.59 E-value=22 Score=26.88 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=28.2
Q ss_pred HhhcCCc-----cccceEEE---CCEEecC---C-CCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGV-----YATPTFFV---NGFSLAG---A-GSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV-----~GTPTffI---NG~~~~g---a-~s~~~~e~~~~~Id~~l~ 146 (160)
.++.+|| ..+|+.|| +|+++.- . ...++.+++.+.|+++..
T Consensus 132 ~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~~ 184 (221)
T 2c0d_A 132 ISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIH 184 (221)
T ss_dssp HHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 3566777 47898877 7877532 1 124678999999998864
No 281
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=36.85 E-value=57 Score=24.19 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=25.3
Q ss_pred HhhcCCcc------ccceEEE---CCEEec---CCCC-CCCHHHHHHHHHHHh
Q 031378 106 FSATRGVY------ATPTFFV---NGFSLA---GAGS-PLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~------GTPTffI---NG~~~~---ga~s-~~~~e~~~~~Id~~l 145 (160)
.++.+||. ++|+.|| +|+++. +..+ ....+++.+.|+++-
T Consensus 145 ~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l~ 197 (222)
T 3ztl_A 145 ISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQ 197 (222)
T ss_dssp HHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 35667787 8898777 788753 2211 234677777777653
No 282
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=36.71 E-value=45 Score=25.37 Aligned_cols=40 Identities=15% Similarity=0.235 Sum_probs=26.2
Q ss_pred HhhcCCcc------ccceEEE---CCEEec----CCCCCCCHHHHHHHHHHHh
Q 031378 106 FSATRGVY------ATPTFFV---NGFSLA----GAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 106 ~a~~~GV~------GTPTffI---NG~~~~----ga~s~~~~e~~~~~Id~~l 145 (160)
.++.+||. .+|+.|| +|++.. ......+.+++.+.|+++-
T Consensus 153 v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 153 ISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 45667776 6887777 788753 1222455788888887764
No 283
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=36.56 E-value=31 Score=26.02 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=23.6
Q ss_pred c-eEEE--CCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 116 P-TFFV--NGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 116 P-TffI--NG~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
| ||+| +|+++.-..+..+.+++.+.|+++++..
T Consensus 178 pttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~~~ 213 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQF 213 (215)
T ss_dssp TCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGGGC
T ss_pred ceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5 5777 6887643334566899999999998653
No 284
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=35.79 E-value=52 Score=24.31 Aligned_cols=41 Identities=15% Similarity=0.231 Sum_probs=27.8
Q ss_pred HhhcCCcc------ccceEEE---CCEEec---CC-CCCCCHHHHHHHHHHHhh
Q 031378 106 FSATRGVY------ATPTFFV---NGFSLA---GA-GSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 106 ~a~~~GV~------GTPTffI---NG~~~~---ga-~s~~~~e~~~~~Id~~l~ 146 (160)
.++.+||. ++|+.|| ||++.. +. ....+.+++.+.|+++..
T Consensus 124 ~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 177 (211)
T 2pn8_A 124 ISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQY 177 (211)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 35666774 6999888 788763 21 123468899999988763
No 285
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=35.59 E-value=69 Score=25.52 Aligned_cols=51 Identities=14% Similarity=0.221 Sum_probs=36.7
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
.++...++-.+.||+| ++++|. .|....++.++..++++....... .+.|+
T Consensus 38 ~l~~lv~~li~~Gv~g---l~v~Gt--tGE~~~Ls~~Er~~v~~~~~~~~~--grvpv 88 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDS---LVLAGT--TGESPTTTAAEKLELLKAVREEVG--DRAKL 88 (304)
T ss_dssp HHHHHHHHHHHTTCCE---EEESST--TTTTTTSCHHHHHHHHHHHHHHHT--TTSEE
T ss_pred HHHHHHHHHHHcCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHhC--CCCcE
Confidence 3444555556678887 888988 466678999999999998886552 25553
No 286
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.36 E-value=40 Score=24.89 Aligned_cols=38 Identities=11% Similarity=0.079 Sum_probs=27.7
Q ss_pred hcCCccccceEEE----CC--EE---ecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 108 ATRGVYATPTFFV----NG--FS---LAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 108 ~~~GV~GTPTffI----NG--~~---~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
+.++|+++|++.| ++ .. +.| ..+.+++.+.+...+.+.
T Consensus 124 ~~~~~~~~P~l~ii~~~~~~~~vl~~~~G---~~~~~~ll~~L~~~~e~~ 170 (178)
T 2ec4_A 124 RTQKTDQFPLFLIIMGKRSSNEVLNVIQG---NTTVDELMMRLMAAMEIF 170 (178)
T ss_dssp HHSCSTTCSEEEEECCCSSCCCEEEEECS---CCCHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCCeEEEEEcCCCceEEEEEEeC---CCCHHHHHHHHHHHHHHh
Confidence 5589999999998 22 22 445 556999999888877544
No 287
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=34.94 E-value=22 Score=27.81 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=23.7
Q ss_pred CccccceEEE---CCEEec---CCC-CCCCHHHHHHHHHHHhh
Q 031378 111 GVYATPTFFV---NGFSLA---GAG-SPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 111 GV~GTPTffI---NG~~~~---ga~-s~~~~e~~~~~Id~~l~ 146 (160)
|+.++|++|| ||++.. +.. .+.+.+++...|+++..
T Consensus 120 g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 120 ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp SSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred CCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 4448996555 687643 211 13468999999998864
No 288
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=30.16 E-value=68 Score=25.33 Aligned_cols=45 Identities=11% Similarity=0.152 Sum_probs=32.4
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++...++-.+.||+| ++++|. .|.....+.++..++++...+..
T Consensus 23 ~l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~ 67 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDA---IIVCGT--TGEATTMTETERKETIKFVIDKV 67 (291)
T ss_dssp HHHHHHHHHHHTTCCE---EEESSG--GGTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHh
Confidence 3444455555678877 788887 45556888999999999888655
No 289
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=29.42 E-value=66 Score=25.41 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=34.6
Q ss_pred HHHHHHHHhhc-CCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 99 LTRVSFKFSAT-RGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 99 ~i~~~~k~a~~-~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
.++...++-.+ .||+| ++++|. .|.....+.++..++++....... .+.|+
T Consensus 25 ~l~~lv~~li~~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~~--grvpv 76 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDG---LYVGGS--TGENFMLSTEEKKEIFRIAKDEAK--DQIAL 76 (293)
T ss_dssp HHHHHHHHHHHTSCCSE---EEESSG--GGTGGGSCHHHHHHHHHHHHHHHT--TSSEE
T ss_pred HHHHHHHHHHhhCCCcE---EEeCcc--ccchhhCCHHHHHHHHHHHHHHhC--CCCeE
Confidence 34444555555 67777 888887 455568889999999998886552 24553
No 290
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=29.23 E-value=77 Score=25.03 Aligned_cols=45 Identities=22% Similarity=0.327 Sum_probs=32.6
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++...++-.+.||+| ++++|. .|.....+.++..++++......
T Consensus 22 ~l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~ 66 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDA---ILVCGT--TGESPTLTFEEHEKVIEFAVKRA 66 (294)
T ss_dssp HHHHHHHHHHTTTCCE---EEESST--TTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHh
Confidence 3444555556677777 788887 46566888999999999887654
No 291
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=29.00 E-value=78 Score=25.14 Aligned_cols=51 Identities=20% Similarity=0.253 Sum_probs=35.0
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
.++...++-.+.||+| ++++|. .|....++.++..++++....... .+.|+
T Consensus 34 ~l~~lv~~li~~Gv~g---l~v~Gt--TGE~~~Ls~eEr~~v~~~~~~~~~--grvpV 84 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTA---IVVGGT--TGESPTLTSEEKVALYRHVVSVVD--KRVPV 84 (301)
T ss_dssp HHHHHHHHHHHTTCCE---EEESST--TTTGGGSCHHHHHHHHHHHHHHHT--TSSCE
T ss_pred HHHHHHHHHHHcCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHhC--CCceE
Confidence 3444455555668877 788887 465668889999999998886552 24553
No 292
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=28.96 E-value=74 Score=25.06 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=32.5
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++...++-.+.||+| ++++|. .|.....+.++..++++...+..
T Consensus 22 ~l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~ 66 (289)
T 2yxg_A 22 GLEENINFLIENGVSG---IVAVGT--TGESPTLSHEEHKKVIEKVVDVV 66 (289)
T ss_dssp HHHHHHHHHHHTTCSE---EEESST--TTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHh
Confidence 3444455555677777 788887 46666888999999999887654
No 293
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=27.96 E-value=81 Score=24.94 Aligned_cols=45 Identities=9% Similarity=0.183 Sum_probs=31.6
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++...++-.+.||+| ++++|. .|.....+.++..++++...+..
T Consensus 25 ~l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~ 69 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDS---VTLFGT--TGEGCSVGSRERQAILSSFIAAG 69 (294)
T ss_dssp HHHHHHHHHHHTTCSE---EEESST--TTTGGGSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHh
Confidence 3444455555567777 788887 45556788999999998887655
No 294
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=27.87 E-value=81 Score=24.18 Aligned_cols=32 Identities=9% Similarity=0.206 Sum_probs=20.7
Q ss_pred cceEEE---CCEEec-----CCCCCCCHHHHHHHHHHHhh
Q 031378 115 TPTFFV---NGFSLA-----GAGSPLDYNGWRKVIDPLLS 146 (160)
Q Consensus 115 TPTffI---NG~~~~-----ga~s~~~~e~~~~~Id~~l~ 146 (160)
+|+.|| ||++.. ......++++..+.|+.+..
T Consensus 137 ~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 137 SPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp CCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred cCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 787665 688752 12234568888888887764
No 295
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=27.85 E-value=71 Score=25.36 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 100 TRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 100 i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
++...++-.+.||+| ++++|. .|....++.++..++++....... .+.|+
T Consensus 23 l~~lv~~li~~Gv~g---i~v~Gt--tGE~~~Ls~~Er~~v~~~~~~~~~--grvpv 72 (297)
T 2rfg_A 23 LAGLVDWQIKHGAHG---LVPVGT--TGESPTLTEEEHKRVVALVAEQAQ--GRVPV 72 (297)
T ss_dssp HHHHHHHHHHTTCSE---EECSSG--GGTGGGSCHHHHHHHHHHHHHHHT--TSSCB
T ss_pred HHHHHHHHHHcCCCE---EEECcc--ccchhhCCHHHHHHHHHHHHHHhC--CCCeE
Confidence 444455555667777 788887 455568889999999998886552 24554
No 296
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=27.36 E-value=80 Score=25.11 Aligned_cols=45 Identities=18% Similarity=0.314 Sum_probs=32.5
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++...++-.+.||+| ++++|. .|....++.++..++++......
T Consensus 33 ~l~~lv~~li~~Gv~G---l~v~Gt--TGE~~~Ls~eEr~~v~~~~~~~~ 77 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDG---LYVGGS--TGEAFVQSLSEREQVLEIVAEEA 77 (303)
T ss_dssp HHHHHHHHHHHTTCSE---EEESST--TTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCE---EEECee--ccChhhCCHHHHHHHHHHHHHHh
Confidence 3444455555677777 788887 46666888999999999888655
No 297
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=27.06 E-value=72 Score=25.18 Aligned_cols=44 Identities=16% Similarity=0.216 Sum_probs=30.9
Q ss_pred HHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 100 TRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 100 i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
++...++-.+.||+| ++++|. .|.....+.++..++++......
T Consensus 24 l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~ 67 (292)
T 2ojp_A 24 LKKLIDYHVASGTSA---IVSVGT--TGESATLNHDEHADVVMMTLDLA 67 (292)
T ss_dssp HHHHHHHHHHHTCCE---EEESST--TTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCE---EEECcc--ccchhhCCHHHHHHHHHHHHHHh
Confidence 444444445557777 788887 46566888999999998887654
No 298
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=26.58 E-value=83 Score=25.05 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=35.0
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
.++...++-.+.||+| ++++|. .|....++.++..++++....... .+.|+
T Consensus 34 ~l~~lv~~li~~Gv~g---l~v~Gt--TGE~~~Ls~eEr~~vi~~~~~~~~--grvpV 84 (306)
T 1o5k_A 34 SYERLVRYQLENGVNA---LIVLGT--TGESPTVNEDEREKLVSRTLEIVD--GKIPV 84 (306)
T ss_dssp HHHHHHHHHHHTTCCE---EEESSG--GGTGGGCCHHHHHHHHHHHHHHHT--TSSCE
T ss_pred HHHHHHHHHHHcCCCE---EEeCcc--ccchhhCCHHHHHHHHHHHHHHhC--CCCeE
Confidence 3444455555668777 788888 455568889999999998886552 24553
No 299
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=26.54 E-value=49 Score=23.85 Aligned_cols=31 Identities=16% Similarity=-0.081 Sum_probs=19.0
Q ss_pred CccccceEEE---CCEEec--CCCCCCCHHHHHHHHHHHh
Q 031378 111 GVYATPTFFV---NGFSLA--GAGSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 111 GV~GTPTffI---NG~~~~--ga~s~~~~e~~~~~Id~~l 145 (160)
||.|.||+++ +|+.+. |..+ +...+.+++..
T Consensus 107 ~v~~iPt~i~~~~~G~~~~~~g~~p----~~~~~~i~~~~ 142 (167)
T 1z6n_A 107 ERIAIPLVLVLDEEFNLLGRFVERP----QAVLDGGPQAL 142 (167)
T ss_dssp SSCCSSEEEEECTTCCEEEEEESSC----HHHHHHCHHHH
T ss_pred CCCCcCeEEEECCCCCEEEEEcCCC----HHHHHhHHHHH
Confidence 5999999887 346532 3333 45556666543
No 300
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=26.48 E-value=91 Score=25.37 Aligned_cols=51 Identities=22% Similarity=0.200 Sum_probs=36.6
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
.++...++-.+.||+| ++++|. .|....++.++..++++..+.... .+.|+
T Consensus 53 ~l~~lv~~li~~Gv~G---l~v~Gt--TGE~~~Ls~eEr~~vi~~~ve~~~--grvpV 103 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDG---LFFLGS--GGEFSQLGAEERKAIARFAIDHVD--RRVPV 103 (343)
T ss_dssp HHHHHHHHHHHTTCSC---EEESST--TTTGGGSCHHHHHHHHHHHHHHHT--TSSCE
T ss_pred HHHHHHHHHHHcCCCE---EEeCcc--ccChhhCCHHHHHHHHHHHHHHhC--CCCcE
Confidence 4555556566678888 888887 466668899999999998886652 25553
No 301
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=25.54 E-value=73 Score=25.13 Aligned_cols=45 Identities=11% Similarity=0.233 Sum_probs=31.8
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++...++-.+.||+| ++++|. .|.....+.++..++++......
T Consensus 22 ~l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~ 66 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFG---LVPCGT--TGESPTLSKSEHEQVVEITIKTA 66 (292)
T ss_dssp HHHHHHHHHHHTTCSE---EETTSG--GGTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHh
Confidence 3444455555667777 778887 35556888999999998887654
No 302
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=23.26 E-value=76 Score=23.09 Aligned_cols=27 Identities=15% Similarity=0.234 Sum_probs=13.9
Q ss_pred eEEE-CCEEec---CC-CCCCCHHHHHHHHHH
Q 031378 117 TFFV-NGFSLA---GA-GSPLDYNGWRKVIDP 143 (160)
Q Consensus 117 TffI-NG~~~~---ga-~s~~~~e~~~~~Id~ 143 (160)
||+| ||++.. +. .+..+..+..++++.
T Consensus 152 tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 152 SMLVEDGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp EEEEETTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred EEEECCCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 6666 888742 21 123445555555543
No 303
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=23.02 E-value=36 Score=30.40 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=19.6
Q ss_pred HhhcCCccccceEEECCEEecC
Q 031378 106 FSATRGVYATPTFFVNGFSLAG 127 (160)
Q Consensus 106 ~a~~~GV~GTPTffING~~~~g 127 (160)
.||..|.+..|++.|||+.+.-
T Consensus 511 ~gR~~g~s~~p~V~vNG~~v~v 532 (591)
T 4aw7_A 511 IGRPVSASKKPVVKINGTAVSV 532 (591)
T ss_dssp EEEETTSCSCCEEEETTEEECC
T ss_pred cCcCCCcCCCCEEEECCEEecc
Confidence 4799999999999999999863
No 304
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=22.40 E-value=57 Score=22.69 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=18.6
Q ss_pred cceEEE---CCEEecCC-----CCCCCHHHHHHHHHHHh
Q 031378 115 TPTFFV---NGFSLAGA-----GSPLDYNGWRKVIDPLL 145 (160)
Q Consensus 115 TPTffI---NG~~~~ga-----~s~~~~e~~~~~Id~~l 145 (160)
+|+.|| ||++..-. ....+.+++.+.|+++|
T Consensus 133 ~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 133 ARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp CCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred eeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 787777 68765311 23445677777777653
No 305
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=22.13 E-value=1.2e+02 Score=24.20 Aligned_cols=45 Identities=11% Similarity=0.116 Sum_probs=32.4
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
.++...++-.+.||+| ++++|. .|....++.++..++++..++..
T Consensus 37 ~l~~lv~~li~~Gv~g---i~v~Gt--tGE~~~Lt~~Er~~v~~~~~~~~ 81 (304)
T 3l21_A 37 TAARLANHLVDQGCDG---LVVSGT--TGESPTTTDGEKIELLRAVLEAV 81 (304)
T ss_dssp HHHHHHHHHHHTTCSE---EEESST--TTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCE---EEeCcc--ccchhhCCHHHHHHHHHHHHHHh
Confidence 3444455555667777 688887 46666888999999999888765
No 306
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=21.91 E-value=93 Score=25.16 Aligned_cols=51 Identities=14% Similarity=-0.017 Sum_probs=35.4
Q ss_pred HHHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 99 LTRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 99 ~i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
.++...++-.+.||+| ++++|. .|....++.++..++++....... .+.|+
T Consensus 56 ~l~~lv~~li~~Gv~G---l~v~Gt--TGE~~~Ls~eEr~~vi~~~ve~~~--grvpV 106 (332)
T 2r8w_A 56 AFSALIARLDAAEVDS---VGILGS--TGIYMYLTREERRRAIEAAATILR--GRRTL 106 (332)
T ss_dssp HHHHHHHHHHHHTCSE---EEESST--TTTGGGSCHHHHHHHHHHHHHHHT--TSSEE
T ss_pred HHHHHHHHHHHcCCCE---EEECcc--ccChhhCCHHHHHHHHHHHHHHhC--CCCcE
Confidence 3444455555567777 888887 466668889999999998886652 24553
No 307
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=21.52 E-value=1.1e+02 Score=24.15 Aligned_cols=44 Identities=16% Similarity=0.272 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhc
Q 031378 100 TRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEK 148 (160)
Q Consensus 100 i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~ 148 (160)
++...++-.+.||+| ++++|. .|...+.+.++..++++...+..
T Consensus 24 l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~ 67 (291)
T 3tak_A 24 LEKLVEWHIEQGTNS---IVAVGT--TGEASTLSMEEHTQVIKEIIRVA 67 (291)
T ss_dssp HHHHHHHHHHHTCCE---EEESST--TTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCE---EEECcc--ccccccCCHHHHHHHHHHHHHHh
Confidence 333444445567776 588887 46566888999999998887655
No 308
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.42 E-value=1.3e+02 Score=23.67 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=33.3
Q ss_pred HHHHHHHhhcCCccccceEEECCEEecCCCCCCCHHHHHHHHHHHhhhcCCCCCccc
Q 031378 100 TRVSFKFSATRGVYATPTFFVNGFSLAGAGSPLDYNGWRKVIDPLLSEKGKKREVPL 156 (160)
Q Consensus 100 i~~~~k~a~~~GV~GTPTffING~~~~ga~s~~~~e~~~~~Id~~l~~~~~~~~~~~ 156 (160)
++...++-.+.||+| ++++|. .|.....+.++..++++...+.... +.|+
T Consensus 30 l~~lv~~li~~Gv~g---l~~~Gt--tGE~~~Ls~~Er~~v~~~~~~~~~g--rvpv 79 (297)
T 3flu_A 30 LRDLIDWHIENGTDG---IVAVGT--TGESATLSVEEHTAVIEAVVKHVAK--RVPV 79 (297)
T ss_dssp HHHHHHHHHHTTCCE---EEESST--TTTGGGSCHHHHHHHHHHHHHHHTT--SSCE
T ss_pred HHHHHHHHHHcCCCE---EEeCcc--ccCcccCCHHHHHHHHHHHHHHhCC--CCcE
Confidence 333444445566665 788887 4666788899999999988766532 4553
No 309
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=20.53 E-value=1.5e+02 Score=23.72 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=30.6
Q ss_pred cCCcc-ccceEEE-C---C--EEe--cCCCCCCCHHHHHHHHHHHhhhcCCCC
Q 031378 109 TRGVY-ATPTFFV-N---G--FSL--AGAGSPLDYNGWRKVIDPLLSEKGKKR 152 (160)
Q Consensus 109 ~~GV~-GTPTffI-N---G--~~~--~ga~s~~~~e~~~~~Id~~l~~~~~~~ 152 (160)
.+|+. +.|++.| | + +.+ ++..+..+.+.+.++++..+.++-++.
T Consensus 302 ~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 302 TFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp HHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred hcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcc
Confidence 35665 7999999 3 3 344 221135789999999999999887643
Done!