Query 031379
Match_columns 160
No_of_seqs 136 out of 1113
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 21:20:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031379.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031379hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gjd_A Ubiquitin-conjugating e 100.0 4.8E-54 1.6E-58 308.8 18.8 157 1-158 1-157 (157)
2 3rcz_B SUMO-conjugating enzyme 100.0 8.8E-54 3E-58 308.7 19.2 155 4-158 9-163 (163)
3 2grr_A Ubiquitin-conjugating e 100.0 3E-53 1E-57 305.8 19.7 157 1-158 4-160 (161)
4 4gpr_A Ubiquitin-conjugating e 100.0 9.9E-53 3.4E-57 300.2 20.2 148 4-158 3-150 (151)
5 1ayz_A UBC2, ubiquitin-conjuga 100.0 5.8E-53 2E-57 306.1 18.7 150 1-158 1-150 (169)
6 2ucz_A UBC7, ubiquitin conjuga 100.0 8.5E-53 2.9E-57 304.6 19.1 153 1-158 1-164 (165)
7 2aak_A UBC1, ubiquitin conjuga 100.0 1.1E-52 3.7E-57 300.4 19.4 150 1-158 1-150 (152)
8 1zdn_A Ubiquitin-conjugating e 100.0 1.1E-52 3.9E-57 301.9 18.1 149 1-157 10-158 (158)
9 2c2v_B Ubiquitin-conjugating e 100.0 4E-53 1.4E-57 303.1 14.8 150 1-158 2-151 (154)
10 2c4o_A Ubiquitin-conjugating e 100.0 4.2E-52 1.4E-56 300.6 20.1 148 4-158 18-165 (165)
11 1z2u_A Ubiquitin-conjugating e 100.0 4.3E-52 1.5E-56 296.7 19.0 148 4-158 3-150 (150)
12 3h8k_A Ubiquitin-conjugating e 100.0 5.6E-52 1.9E-56 300.1 19.4 151 4-158 2-163 (164)
13 2ayv_A Ubiquitin-conjugating e 100.0 6.8E-52 2.3E-56 299.7 19.4 147 4-157 20-166 (166)
14 2bep_A Ubiquitin-conjugating e 100.0 1.5E-51 5E-56 296.5 19.7 150 1-158 5-158 (159)
15 1yh2_A HSPC150 protein similar 100.0 3E-51 1E-55 297.4 20.4 150 4-158 3-154 (169)
16 2e2c_A Ubiquitin conjugating e 100.0 1.1E-51 3.9E-56 296.2 17.3 147 4-158 8-154 (156)
17 2r0j_A Ubiquitin carrier prote 100.0 2E-51 6.9E-56 292.8 18.3 145 7-158 3-147 (149)
18 1fxt_A Ubiquitin-conjugating e 100.0 8.1E-52 2.8E-56 294.9 15.6 147 6-158 2-149 (149)
19 1jat_A Ubiquitin-conjugating e 100.0 1E-51 3.5E-56 296.1 14.5 148 4-158 4-151 (155)
20 3k9o_A Ubiquitin-conjugating e 100.0 5.4E-51 1.9E-55 303.5 17.4 151 1-159 2-156 (201)
21 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.1E-50 3.9E-55 299.2 18.1 148 4-158 31-192 (193)
22 3bzh_A Ubiquitin-conjugating e 100.0 3.1E-50 1.1E-54 297.2 20.3 148 4-158 47-194 (194)
23 1i7k_A Ubiquitin-conjugating e 100.0 1.3E-50 4.4E-55 295.8 17.0 147 4-158 29-175 (179)
24 2pwq_A Ubiquitin conjugating e 100.0 1.1E-50 3.9E-55 303.7 16.9 148 4-158 22-170 (216)
25 3rz3_A Ubiquitin-conjugating e 100.0 2.2E-50 7.4E-55 296.2 17.6 154 1-158 3-173 (183)
26 3fn1_B NEDD8-conjugating enzym 100.0 6.3E-50 2.2E-54 290.1 18.5 150 4-158 13-167 (167)
27 1wzv_A Ubiquitin-conjugating e 100.0 3.9E-50 1.3E-54 287.9 17.1 146 5-158 4-151 (155)
28 3e46_A Ubiquitin-conjugating e 100.0 1.3E-49 4.5E-54 303.9 19.3 151 1-159 54-208 (253)
29 1tte_A Ubiquitin-conjugating e 100.0 2.1E-50 7.2E-55 302.0 13.8 147 6-158 3-150 (215)
30 1yrv_A Ubiquitin-conjugating l 100.0 5.3E-50 1.8E-54 290.4 14.9 148 1-155 20-168 (169)
31 2y9m_A Ubiquitin-conjugating e 100.0 5.5E-49 1.9E-53 286.1 18.5 151 1-158 3-168 (172)
32 1c4z_D UBCH7, ubiquitin conjug 100.0 9E-50 3.1E-54 285.8 11.5 147 6-158 3-149 (154)
33 2awf_A Ubiquitin-conjugating e 100.0 3.2E-49 1.1E-53 287.2 14.2 145 4-152 16-172 (172)
34 2z5d_A Ubiquitin-conjugating e 100.0 2.7E-49 9.3E-54 288.5 12.5 147 1-158 20-169 (179)
35 2onu_A Ubiquitin-conjugating e 100.0 3.4E-49 1.2E-53 282.0 11.0 144 5-158 2-147 (152)
36 1y8x_A Ubiquitin-conjugating e 100.0 1.6E-47 5.3E-52 275.5 16.6 142 4-155 5-147 (160)
37 2nvu_C NEDD8-conjugating enzym 100.0 3.3E-47 1.1E-51 278.3 16.2 143 4-156 25-168 (180)
38 1yf9_A Ubiquitin carrier prote 100.0 8.9E-48 3.1E-52 279.2 12.6 143 5-158 12-156 (171)
39 4ddg_A Ubiquitin-conjugating e 100.0 1.1E-46 3.7E-51 305.5 19.3 149 4-159 2-150 (399)
40 3o2u_A NEDD8-conjugating enzym 100.0 5.2E-46 1.8E-50 274.0 15.3 144 4-157 28-178 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.3E-45 4.3E-50 267.4 11.5 143 1-151 5-164 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 3.1E-43 1.1E-47 275.6 15.7 152 1-158 73-243 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 7.5E-44 2.5E-48 255.0 10.9 133 4-141 20-156 (156)
44 1jat_B Ubiquitin-conjugating e 100.0 2.8E-44 9.7E-49 252.9 6.7 133 1-138 2-138 (138)
45 2a4d_A Ubiquitin-conjugating e 100.0 4.2E-42 1.4E-46 246.4 13.9 128 4-135 24-156 (160)
46 2fo3_A Ubiquitin-conjugating e 100.0 6E-42 2E-46 237.2 13.8 118 4-128 5-123 (125)
47 2h2y_A Ubiquitin-conjugating e 100.0 7.3E-41 2.5E-45 234.8 15.5 116 4-126 19-135 (136)
48 2hlw_A Ubiquitin-conjugating e 100.0 2.6E-41 8.9E-46 244.8 10.4 127 5-135 35-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 1.2E-40 4.2E-45 233.3 12.0 109 7-122 24-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.7E-38 5.9E-43 233.4 16.0 118 4-128 13-131 (187)
51 1zuo_A Hypothetical protein LO 100.0 2.9E-40 1E-44 242.5 3.4 142 1-157 24-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.7E-29 5.8E-34 179.0 0.7 98 7-115 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 4.3E-20 1.5E-24 131.8 9.8 115 8-128 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 4.1E-20 1.4E-24 128.1 -0.4 86 6-107 35-131 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.4E-15 4.7E-20 106.8 6.9 79 37-123 51-138 (146)
56 2ebm_A RWD domain-containing p 96.8 0.02 6.9E-07 38.4 10.2 67 7-80 12-78 (128)
57 2day_A Ring finger protein 25; 96.3 0.076 2.6E-06 35.5 10.5 69 9-80 12-82 (128)
58 3zqs_A E3 ubiquitin-protein li 96.1 0.051 1.8E-06 39.1 9.1 83 9-122 5-87 (186)
59 2yz0_A Serine/threonine-protei 95.5 0.29 1E-05 33.0 10.6 71 8-80 13-85 (138)
60 2ebk_A RWD domain-containing p 94.7 0.13 4.5E-06 34.3 7.1 66 9-79 11-78 (128)
61 2daw_A RWD domain containing p 94.0 0.99 3.4E-05 31.1 12.7 23 58-80 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 93.6 1.1 3.6E-05 30.0 11.0 71 7-79 12-85 (137)
63 2dax_A Protein C21ORF6; RWD do 92.1 0.46 1.6E-05 32.7 6.3 24 58-81 74-97 (152)
64 2cwb_A Chimera of immunoglobul 84.8 0.18 6.2E-06 33.0 0.0 36 122-157 19-54 (108)
65 3u3c_B Paxillin LD2 peptide; 4 68.8 3.6 0.00012 18.9 1.9 20 6-25 6-25 (26)
66 3rls_A YAF9, protein AF-9 homo 31.1 1.4E+02 0.0047 21.0 7.3 45 37-83 30-74 (175)
67 2jrw_A Cyclic extended PEP.1; 30.8 18 0.00062 16.5 0.8 16 70-85 4-19 (26)
68 2bum_A Protocatechuate 3,4-dio 26.8 54 0.0019 23.6 3.3 25 55-79 109-138 (209)
69 3g9r_A Fusion complex of HIV-1 25.3 66 0.0023 16.7 2.5 14 5-18 28-41 (42)
70 3pft_A Flavin reductase; desul 23.7 38 0.0013 22.9 1.9 30 71-100 42-74 (157)
71 2ccv_A Helix pomatia agglutini 22.0 1.3E+02 0.0043 18.8 4.0 23 56-79 28-50 (101)
72 2rf4_B DNA-directed RNA polyme 21.8 42 0.0015 20.7 1.6 10 6-15 63-72 (87)
73 1zoq_C CREB-binding protein, i 21.7 50 0.0017 17.7 1.6 42 115-158 4-46 (47)
74 3nbm_A PTS system, lactose-spe 20.7 97 0.0033 19.6 3.3 46 1-50 17-62 (108)
75 2ahq_A Sigma-54, RNA polymeras 20.3 26 0.00088 21.1 0.3 49 108-159 16-65 (76)
76 2f4m_B UV excision repair prot 20.2 1.1E+02 0.0038 17.4 3.1 20 130-149 37-56 (61)
77 2cu9_A Spcia1, histone chapero 20.0 1.8E+02 0.0063 20.0 4.7 38 38-75 36-86 (161)
No 1
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4.8e-54 Score=308.77 Aligned_cols=157 Identities=60% Similarity=1.143 Sum_probs=148.2
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| +++.+||++|+++++++++.|+++.+....++.+|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|
T Consensus 1 Ms-~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MS-SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp ---CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 88 78999999999999999999999998766555569999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
++|||||+.+|+||+++|...++|+|+++|.+||.+|+++|.+|++++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999875579999999999999999999999999999999999999999999999999999984
No 2
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=8.8e-54 Score=308.73 Aligned_cols=155 Identities=60% Similarity=1.159 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
..|.+||++|+++++++++.|+++.+..++|++.|+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|++|
T Consensus 9 ~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~ 88 (163)
T 3rcz_B 9 SLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLF 88 (163)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 57899999999999999999999999876666569999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|+||+++|...++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|++|||+
T Consensus 89 HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 89 HPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp STTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999999875579999999999999999999999999999999999999999999999999999995
No 3
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3e-53 Score=305.78 Aligned_cols=157 Identities=64% Similarity=1.212 Sum_probs=149.3
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| +.+.+||++|+++++++++.|+.+.+....++.+|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 4 M~-~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 4 MS-GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp CC-HHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cc-HHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 77 78999999999999999999999998765554569999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
++|||||+.+|.||+++|...++|+|+++|.+||.+|+++|.+|++++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 83 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 83 PLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp CCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999864579999999999999999999999999999999999999999999999999999996
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=9.9e-53 Score=300.21 Aligned_cols=148 Identities=31% Similarity=0.689 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
.+|.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~-----~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 77 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDPPCNCSAGPVG-----DDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVY 77 (151)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESS-----SCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcc
Confidence 6789999999999999999999999865 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 78 HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 78 HPNINKNGVICLDILKD--QWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cceECCCCEEEcccccC--CCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999987 89999999999999999999999999999999999999999999999999999996
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5.8e-53 Score=306.06 Aligned_cols=150 Identities=43% Similarity=0.775 Sum_probs=144.6
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| +.+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|
T Consensus 1 Ms-~~a~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t 74 (169)
T 1ayz_A 1 MS-TPARRRLMRDFKRMKEDAPPGVSASPLP-----DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLS 74 (169)
T ss_dssp -C-CHHHHHHHHHHHHHHHSCCTTEEEEEET-----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEecC-----CccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCcccccc
Confidence 88 7889999999999999999999998875 49999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
++|||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 75 ~i~HPNI~~~G~ICl~iL~~--~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 75 EMFHPNVYANGEICLDILQN--RWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp CCCCTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCCCCeEeehhhcc--CCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999987 89999999999999999999999999999999999999999999999999999985
No 6
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=8.5e-53 Score=304.65 Aligned_cols=153 Identities=35% Similarity=0.712 Sum_probs=144.6
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| +.+.+||++|+++++++++.|+++.+... +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|
T Consensus 1 M~-~~a~~RL~kEl~~l~~~~~~gi~~~~~~~----~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t 75 (165)
T 2ucz_A 1 MS-KTAQKRLLKELQQLIKDSPPGIVAGPKSE----NNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTP 75 (165)
T ss_dssp -C-HHHHHHHHHHHHHHHHSCCTTEEEEESSS----SCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEECCC----CCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeC
Confidence 88 78999999999999999999999988653 49999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCC-----------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHH
Q 031379 81 GFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRV 149 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~ 149 (160)
++|||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++|
T Consensus 76 ~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v 155 (165)
T 2ucz_A 76 SILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQV 155 (165)
T ss_dssp CCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHH
T ss_pred CCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHH
Confidence 99999999999999999931 2489999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC
Q 031379 150 RQQAKQYPA 158 (160)
Q Consensus 150 r~~~~k~a~ 158 (160)
|+|+++|++
T Consensus 156 ~~~~~~~~~ 164 (165)
T 2ucz_A 156 KLSILKSLG 164 (165)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999975
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.1e-52 Score=300.36 Aligned_cols=150 Identities=43% Similarity=0.822 Sum_probs=145.4
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| +.+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms-~~a~~RL~~E~~~l~~~~~~~i~~~~~~-----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 74 (152)
T 2aak_A 1 MS-TPARKRLMRDFKRLQQDPPAGISGAPQD-----NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS 74 (152)
T ss_dssp CC-CHHHHHHHHHHHHHHHSCCTTEEEEEET-----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEeCC-----CCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEec
Confidence 88 7889999999999999999999998765 49999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
++|||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 75 ~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 150 (152)
T 2aak_A 75 RMFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150 (152)
T ss_dssp CCCCTTBCTTSBBCCGGGTT--SCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CcccCCCCCCCEEechhhcC--CCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999987 89999999999999999999999999999999999999999999999999999986
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-52 Score=301.88 Aligned_cols=149 Identities=28% Similarity=0.555 Sum_probs=143.8
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| ..+.+||++|+++++++++.|+++.+.. +|+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|
T Consensus 10 ~s-~~~~~RL~kEl~~l~~~~~~gi~~~~~~-----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 83 (158)
T 1zdn_A 10 LP-PHIIRLVYKEVTTLTADPPDGIKVFPNE-----EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLT 83 (158)
T ss_dssp SC-HHHHHHHHHHHHHHHHSCCTTEEEEECS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred cC-HHHHHHHHHHHHHHHhCCCCCEEEEECC-----CChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEecc
Confidence 45 7789999999999999999999998754 49999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcC
Q 031379 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYP 157 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a 157 (160)
++|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 84 ~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 84 KIFHPNVGANGEICVNVLKR--DWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp CCCCTTBCTTSBBCHHHHTT--TCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CcccCCCCCCCEEehhhcCC--CCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999987 8999999999999999999999999999999999999999999999999999997
No 9
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4e-53 Score=303.09 Aligned_cols=150 Identities=31% Similarity=0.586 Sum_probs=142.5
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| ..+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 2 ~s-~~~~~RL~kEl~~l~~~~~~~i~~~~~~-----~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 75 (154)
T 2c2v_B 2 GS-AGLPRRIIKETQRLLAEPVPGIKAEPDE-----SNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMT 75 (154)
T ss_dssp CS-CSCCHHHHHHHHHHHHSCCTTEEEEECS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred cc-HHHHHHHHHHHHHHHhCCCCCEEEEECC-----CchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeec
Confidence 56 6678999999999999999999998865 49999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
++|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 76 ~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 76 KIYHPNVDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp CCCCTTBCTTCBBCCHHHHT--SCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CcccCcCccCCeEEchhccC--CCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999986 89999999999999999999999999999999999999999999999999999996
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=4.2e-52 Score=300.62 Aligned_cols=148 Identities=35% Similarity=0.716 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+++.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~ 92 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVG-----DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 92 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCc
Confidence 6789999999999999999999998865 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|+++||.
T Consensus 93 HPnV~~~G~ICl~iL~~--~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 93 HPNINSNGSICLDILRS--QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCcCCCCCeEeehhhcC--CCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999987 89999999999999999999999999999999999999999999999999999984
No 11
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=4.3e-52 Score=296.66 Aligned_cols=148 Identities=35% Similarity=0.707 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
.++.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~-----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAGPVG-----DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 77 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEEEET-----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECC-----CcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcc
Confidence 5789999999999999999999998865 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 78 HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 78 HPNINSNGSICLDILRS--QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCcCCCCCeEeeccccC--CCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999987 89999999999999999999999999999999999999999999999999999984
No 12
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=5.6e-52 Score=300.12 Aligned_cols=151 Identities=35% Similarity=0.657 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+.|.+||++|+++++++++.|+++.+... +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~----~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNE----ENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMF 77 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESST----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCC----CCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCc
Confidence 56899999999999999999999988764 59999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCC-----------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH
Q 031379 84 HPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQ 152 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~ 152 (160)
||||+.+|+||+++|.. .++|+|++||.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|
T Consensus 78 HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~ 157 (164)
T 3h8k_A 78 HPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQI 157 (164)
T ss_dssp CTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHH
T ss_pred cCCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 99999999999999972 1389999999999999999999999999999999999999999999999999
Q ss_pred HHHcCC
Q 031379 153 AKQYPA 158 (160)
Q Consensus 153 ~~k~a~ 158 (160)
++|+++
T Consensus 158 ~~~s~~ 163 (164)
T 3h8k_A 158 VQKSLG 163 (164)
T ss_dssp HHHHHT
T ss_pred HHHhhc
Confidence 999975
No 13
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-52 Score=299.66 Aligned_cols=147 Identities=36% Similarity=0.733 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+++.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 94 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVG-----DDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIY 94 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCc
Confidence 5589999999999999999999998855 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYP 157 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a 157 (160)
||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||
T Consensus 95 HPNI~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 95 HPNINSQGAICLDILKD--QWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCcCCCCCeEEcccccc--cCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999987 8999999999999999999999999999999999999999999999999999997
No 14
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.5e-51 Score=296.47 Aligned_cols=150 Identities=30% Similarity=0.551 Sum_probs=143.2
Q ss_pred CChHHHHHHHHHHHHHHHhc---CCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeE
Q 031379 1 MSGGIARGRLAEERKSWRKN---HPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCK 77 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~ 77 (160)
|| +.+.+||++|+++++++ ++.|+++.+.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+
T Consensus 5 Ms-~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~-----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 78 (159)
T 2bep_A 5 MA-NIAVQRIKREFKEVLKSEETSKNQIKVDLVD-----ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 78 (159)
T ss_dssp CC-HHHHHHHHHHHHHHHHCHHHHTTSEEEEECS-----SSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred ch-HHHHHHHHHHHHHHHhcCCCCCCCEEEEeCC-----CchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEE
Confidence 66 78999999999999985 58899998866 48999999999999999999999999999999999999999
Q ss_pred eccCccccccc-CCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHc
Q 031379 78 FPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 156 (160)
Q Consensus 78 f~t~i~Hpni~-~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~ 156 (160)
|.|++|||||+ .+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++|
T Consensus 79 f~t~i~HPni~~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~ 156 (159)
T 2bep_A 79 FITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVY 156 (159)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred eeCCCCccCCCCCCCEEeChhhhc--cCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 99999999999 499999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 031379 157 PA 158 (160)
Q Consensus 157 a~ 158 (160)
|.
T Consensus 157 a~ 158 (159)
T 2bep_A 157 AG 158 (159)
T ss_dssp SC
T ss_pred hc
Confidence 96
No 15
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-51 Score=297.39 Aligned_cols=150 Identities=27% Similarity=0.523 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
..+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~-----~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPGITCWQDK-----DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIY 77 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCC-----CchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCc
Confidence 5689999999999999999999998765 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCC--CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNE--DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|.||+++|.. .++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 78 HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 78 HPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp BTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cccCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 99999999999999982 1289999999999999999999999999999999999999999999999999999996
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-51 Score=296.17 Aligned_cols=147 Identities=35% Similarity=0.624 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+.+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~-----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 82 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDG-----DNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCW 82 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECC-----CCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcc
Confidence 5689999999999999999999998765 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+| +|+++|+++||+|+++||+
T Consensus 83 HPnv~~~G~iCl~iL~~--~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 83 HPNVDQSGNICLDILKE--NWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccCceEECccccc--cCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 99999999999999987 899999999999999999999999999999999999 8999999999999999975
No 17
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=2e-51 Score=292.84 Aligned_cols=145 Identities=34% Similarity=0.675 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCccccc
Q 031379 7 RGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPN 86 (160)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~Hpn 86 (160)
.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++||||
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~-----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 77 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVP-----ENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPN 77 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEET-----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECC-----CcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCC
Confidence 5899999999999999999998865 49999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 87 VYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 87 i~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
|+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 78 v~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 78 IDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp BCTTCBBCCGGGTT--TCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEechhcCC--CCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99999999999987 89999999999999999999999999999999999999999999999999999996
No 18
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=8.1e-52 Score=294.94 Aligned_cols=147 Identities=28% Similarity=0.586 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcccc
Q 031379 6 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHP 85 (160)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~Hp 85 (160)
+.+||++|+++++++++.|+++.+... +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~----~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 77 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSE----SDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 77 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSS----SCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCC----CCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 479999999999999999999988653 4899999999999999999999999999999999999999999999999
Q ss_pred cccC-CCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 86 NVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 86 ni~~-~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||+. +|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||.
T Consensus 78 ni~~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 78 NISSVTGAICLDILKN--AWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp TBCSSSCCBCCHHHHT--SCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCcCCCCeEeCCcCCC--CCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9998 99999999987 89999999999999999999999999999999999999999999999999999985
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1e-51 Score=296.13 Aligned_cols=148 Identities=31% Similarity=0.616 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
..+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~-----~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHD-----DNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIY 78 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEET-----TEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECC-----CchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccc
Confidence 3467999999999999999999998865 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 79 HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~ 151 (155)
T 1jat_A 79 HPNIDRLGRICLDVLKT--NWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAK 151 (155)
T ss_dssp BTTBCTTCCBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSE
T ss_pred cCCCCCCCEEEchhhcc--CCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999999999999987 89999999999999999999999999999999999999999999999999999995
No 20
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=5.4e-51 Score=303.53 Aligned_cols=151 Identities=30% Similarity=0.544 Sum_probs=142.4
Q ss_pred CChHHHHHHHHHHHHHHHhc---CCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeE
Q 031379 1 MSGGIARGRLAEERKSWRKN---HPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCK 77 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~ 77 (160)
|| +.+.+||++|+++++++ ++.|+++.+.. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+
T Consensus 2 Ms-~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~-----~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 75 (201)
T 3k9o_A 2 MA-NIAVQRIKREFKEVLKSEETSKNQIKVDLVD-----ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 75 (201)
T ss_dssp ---CTTHHHHHHHHHHHHTCHHHHTTSEEEEECS-----TTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred Cc-HHHHHHHHHHHHHHHhCCCCCCCCEEEEECC-----CCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccc
Confidence 78 78999999999999886 37899998876 49999999999999999999999999999999999999999
Q ss_pred eccCccccccc-CCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHc
Q 031379 78 FPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 156 (160)
Q Consensus 78 f~t~i~Hpni~-~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~ 156 (160)
|.|+||||||+ .+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++|
T Consensus 76 f~t~i~HPnv~~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~ 153 (201)
T 3k9o_A 76 FITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVY 153 (201)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred cccCcccCCCcCCCCeeeCccccc--CCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 99999999999 499999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 031379 157 PAL 159 (160)
Q Consensus 157 a~~ 159 (160)
|..
T Consensus 154 a~~ 156 (201)
T 3k9o_A 154 AGA 156 (201)
T ss_dssp HCC
T ss_pred ccc
Confidence 863
No 21
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-50 Score=299.15 Aligned_cols=148 Identities=31% Similarity=0.629 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHHHhcCC-------------CCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCC
Q 031379 4 GIARGRLAEERKSWRKNHP-------------HGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYP 70 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~-------------~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP 70 (160)
..+.+||++|+++++++++ .|+++.+.. +|+++|+++|.||++|||+||+|+++|.||++||
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP 105 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVG-----GDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYP 105 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEET-----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcC-----CCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCC
Confidence 4578999999999999876 799998866 4999999999999999999999999999999999
Q ss_pred CCCCeeEeccCccccccc-CCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHH
Q 031379 71 SKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRV 149 (160)
Q Consensus 71 ~~pP~v~f~t~i~Hpni~-~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~ 149 (160)
++||+|+|.|+||||||+ .+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|
T Consensus 106 ~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~a 183 (193)
T 2f4z_A 106 YNPPKMKFVTKIWHPNISSQTGAICLDILKH--EWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTA 183 (193)
T ss_dssp TSCCEEEESSCCCBTTBCTTTCBBCCGGGTT--TCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHH
T ss_pred CCCCeEEEecCCccCCCcCCCCEEECccccc--cCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHH
Confidence 999999999999999999 599999999987 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC
Q 031379 150 RQQAKQYPA 158 (160)
Q Consensus 150 r~~~~k~a~ 158 (160)
|+|+++||.
T Consensus 184 r~~t~~ya~ 192 (193)
T 2f4z_A 184 KLWTETFAK 192 (193)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHcc
Confidence 999999996
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.1e-50 Score=297.20 Aligned_cols=148 Identities=34% Similarity=0.645 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+.+.+||++|+++|+++++.|+++.+.. +|+++|+++|.||+||||+||+|+|.|.||++||++||+|+|.|++|
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 121 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKG-----DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIY 121 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeeccc-----CccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCc
Confidence 4588999999999999999999998865 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+|+.+|.+|+++|.++||+|+++||.
T Consensus 122 HPNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 122 HCNINSQGVICLDILKD--NWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cceECCCCceechhhhc--cCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 99999999999999987 89999999999999999999999999999999999999999999999999999984
No 23
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-50 Score=295.82 Aligned_cols=147 Identities=33% Similarity=0.565 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
..+.+||++|+++++++++.|+++.+.. +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 103 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKGISAFPES-----DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCY 103 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTTEEEEEET-----TEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCc
Confidence 6688999999999999999999998865 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|+||+++|.+ .|+|+++|.+||.+|+++|.+|++++|+|.+||.+| +|+++|.++||+++++++.
T Consensus 104 HPNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 104 HPNVDTQGNISLDILKE--KWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp STTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred cCccccCCeEEcccCcC--cCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 99999999999999987 899999999999999999999999999999999999 9999999999999999874
No 24
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.1e-50 Score=303.67 Aligned_cols=148 Identities=32% Similarity=0.632 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+.+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~ 96 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKD-----SNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIW 96 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECS-----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCc
Confidence 6789999999999999999999999876 48999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~-~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+ .+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 97 HPNI~~~~G~ICL~iL~~--~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 97 HPNISSQTGAICLDVLKN--EWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp BTTBCTTTCBBCCHHHHH--HCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCCCcCCCCEEEchhhcc--cCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999 589999999987 89999999999999999999999999999999999999999999999999999996
No 25
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.2e-50 Score=296.16 Aligned_cols=154 Identities=31% Similarity=0.600 Sum_probs=141.4
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|++..+.|||++|+++++++++.|+++.+... +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~----~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 78 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDE----GDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLT 78 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTT----CCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCc----cchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecC
Confidence 66677899999999999999999999885433 59999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcEeecCCCC-----------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH------CHH
Q 031379 81 GFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQ------DAA 143 (160)
Q Consensus 81 ~i~Hpni~~~G~ic~~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~------~~~ 143 (160)
++|||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|++++|+|.+|+.+|++ +++
T Consensus 79 ~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~ 158 (183)
T 3rz3_A 79 KMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDR 158 (183)
T ss_dssp CCCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCC
T ss_pred CCccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHH
Confidence 99999999999999999972 1389999999999999999999999999999999999998 789
Q ss_pred HHHHHHHHHHHHcCC
Q 031379 144 EYKRRVRQQAKQYPA 158 (160)
Q Consensus 144 ~f~~~~r~~~~k~a~ 158 (160)
+|+++||++|+++++
T Consensus 159 ~y~~~v~~~v~~s~~ 173 (183)
T 3rz3_A 159 EYTDIIRKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999864
No 26
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=6.3e-50 Score=290.09 Aligned_cols=150 Identities=25% Similarity=0.483 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+.+.+||++|+++++++++.|+++.+... +|++.|+++| ||++|||+||.|++.|.||++||++||+|+|.|++|
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~----~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 87 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDP----NKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIW 87 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSS----SCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCC----CcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcc
Confidence 56899999999999999999999886543 5899999998 899999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCC----CCCCCCcCCHHHHHHHHHHhhcC-CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSILNE----DNGWRPAITVKQILVGIQDLLDQ-PNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~----~~~W~p~~~i~~vl~~i~~ll~~-p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+ |++++|+|.+||.+|++|+++|.++||+|+++||+
T Consensus 88 HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 88 HPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999975 24799999999999999999999 79999999999999999999999999999999985
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=3.9e-50 Score=287.94 Aligned_cols=146 Identities=26% Similarity=0.561 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEE-eecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 5 IARGRLAEERKSWRKNHPHGFVA-KPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~-~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
++.+||++|+++++++++.|+.+ .+.. +|+++|+++|. |++|||+||.|++.|.||++||++||+|+|.|++|
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~-----~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDD-----ANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIY 77 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECS-----SCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCC-----CchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCc
Confidence 37899999999999999999998 5443 59999999999 99999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCC-CCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 84 HPNVYPSGTVCLSIL-NEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 84 Hpni~~~G~ic~~~l-~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||||+.+|.||+++| .+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 78 HPnV~~~G~iCl~iL~~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 151 (155)
T 1wzv_A 78 HPNVDENGQICLPIISSE--NWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGV 151 (155)
T ss_dssp BTTBCTTCBCCCGGGCTT--TCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCE
T ss_pred cCcCCCCCeEeecCCCcc--CCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999 55 89999999999999999999999999999999999999999999999999999986
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.3e-49 Score=303.87 Aligned_cols=151 Identities=30% Similarity=0.544 Sum_probs=143.9
Q ss_pred CChHHHHHHHHHHHHHHHhc---CCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeE
Q 031379 1 MSGGIARGRLAEERKSWRKN---HPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCK 77 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~ 77 (160)
|| +.+.+||++|+++|+++ ++.|+++.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+
T Consensus 54 Ms-~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~-----dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 127 (253)
T 3e46_A 54 MA-NIAVQRIKREFKEVLKSEETSKNQIKVDLVD-----ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 127 (253)
T ss_dssp CC-HHHHHHHHHHHHHHHHCHHHHTTSEEEEECS-----TTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred cc-HHHHHHHHHHHHHHHhCCCCCCCCEEEEECC-----CcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeee
Confidence 66 78999999999999986 47899998876 49999999999999999999999999999999999999999
Q ss_pred eccCccccccc-CCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHc
Q 031379 78 FPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 156 (160)
Q Consensus 78 f~t~i~Hpni~-~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~ 156 (160)
|.|+||||||+ .+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|.+|++.|.++||+|+++|
T Consensus 128 F~T~i~HPNV~~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~y 205 (253)
T 3e46_A 128 FITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVY 205 (253)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT--CCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ecCCCccCCccCCCCeeecccccC--CCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 99999999999 599999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 031379 157 PAL 159 (160)
Q Consensus 157 a~~ 159 (160)
|..
T Consensus 206 A~~ 208 (253)
T 3e46_A 206 AGA 208 (253)
T ss_dssp HCC
T ss_pred ccc
Confidence 863
No 29
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2.1e-50 Score=302.04 Aligned_cols=147 Identities=28% Similarity=0.585 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcccc
Q 031379 6 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHP 85 (160)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~Hp 85 (160)
+.+||++|+++++++++.|+++.+... +++++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+||||
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~~p~~~----~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 78 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITLEFVSE----SDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 78 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEECCCSS----SSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCS
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCC----ccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccC
Confidence 689999999999999999999988653 4677999999999999999999999999999999999999999999999
Q ss_pred cccC-CCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 86 NVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 86 ni~~-~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||+. +|.||+++|.+ +|+|++||.+||.+|+++|.+|++++|+|.+||.+|.+|++.|.++||+|+++||.
T Consensus 79 NI~~~~G~ICL~iL~~--~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~ 150 (215)
T 1tte_A 79 NISSVTGAICLDILRN--AWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150 (215)
T ss_dssp SSCSSSSCCCSSTTTC--CSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSC
T ss_pred cCcCCCCEEECccCCC--CCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 9998 99999999987 89999999999999999999999999999999999999999999999999999996
No 30
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-50 Score=290.38 Aligned_cols=148 Identities=30% Similarity=0.561 Sum_probs=138.8
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
|| +.+.+||++|+++|+++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 20 M~-~~a~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 93 (169)
T 1yrv_A 20 MH-GRAYLLLHRDFCDLKENNYKGITAKPVS-----EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT 93 (169)
T ss_dssp GG-CHHHHHHHHHHHHHHHHCCTTEEEEECS-----TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS
T ss_pred cC-hHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC
Confidence 66 6789999999999999999999998865 49999999999999999999999999999999999999999999
Q ss_pred Ccccccc-cCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031379 81 GFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 155 (160)
Q Consensus 81 ~i~Hpni-~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k 155 (160)
++||||| +.+|.||+++|...++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++ |+++++
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 94 IPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9999999 7899999999982128999999999999999999999999999999999999999999999 888764
No 31
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=5.5e-49 Score=286.11 Aligned_cols=151 Identities=26% Similarity=0.424 Sum_probs=138.1
Q ss_pred CChHHHHHHHHHHHHHHHh-c-C------CC---CeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCC
Q 031379 1 MSGGIARGRLAEERKSWRK-N-H------PH---GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDY 69 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~-~-~------~~---~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~Y 69 (160)
|| +.+.+||++|++++++ + + +. ++.+.+... +|+++|+++|.||++|||+||.|+++|.||++|
T Consensus 3 Ms-~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~----~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~Y 77 (172)
T 2y9m_A 3 MA-DTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDE----TDLSKWEAIISGPSDTPYENHQFRILIEVPSSY 77 (172)
T ss_dssp -C-HHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESST----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTT
T ss_pred Cc-HHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCC----CchhEEEEEEECCCCCcccCCEEEEEEECCCcC
Confidence 66 7899999999999998 5 3 33 455666232 599999999999999999999999999999999
Q ss_pred CCCCCeeEecc-Cccccccc-CCCcEeecCCC-CCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH-CHHHH
Q 031379 70 PSKPPKCKFPQ-GFFHPNVY-PSGTVCLSILN-EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQ-DAAEY 145 (160)
Q Consensus 70 P~~pP~v~f~t-~i~Hpni~-~~G~ic~~~l~-~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~-~~~~f 145 (160)
|++||+|+|.| ++|||||+ .+|.||+++|. + +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++ |+++|
T Consensus 78 P~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~--~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f 155 (172)
T 2y9m_A 78 PMNPPKISFMQNNILHCNVKSATGEICLNILKPE--EWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAY 155 (172)
T ss_dssp TTSCCEEEECTTSCCCTTEETTTTEECCGGGSTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHH
T ss_pred CCCCCEEEEeeCCeecCCCcCCCCEEeccccCCC--CCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHH
Confidence 99999999999 99999996 79999999998 5 89999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHcCC
Q 031379 146 KRRVRQQAKQYPA 158 (160)
Q Consensus 146 ~~~~r~~~~k~a~ 158 (160)
.++||+|+++++.
T Consensus 156 ~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 156 QGIVKYFLAERER 168 (172)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 32
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=9e-50 Score=285.81 Aligned_cols=147 Identities=27% Similarity=0.576 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcccc
Q 031379 6 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHP 85 (160)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~Hp 85 (160)
+.+||++|+++++++++.|+.+.+... +|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~----~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 77 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDE----ANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHP 77 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSC----SSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCC----CchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccc
Confidence 789999999999999999998665432 59999999998 9999999999999999999999999999999999999
Q ss_pred cccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 86 NVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 86 ni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
||+.+|.||+++|.. ++|+|++++.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 78 nv~~~G~iCl~iL~~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 78 NIDEKGQVCLPVISA-ENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp TBCTTCBBCCTTTSS-SSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC--
T ss_pred cCCCCCEEECCCCCC-CCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 999999999999973 289999999999999999999999999999999999999999999999999999996
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.2e-49 Score=287.24 Aligned_cols=145 Identities=35% Similarity=0.602 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
..+.+||++|+++|+++++.|+++.+... +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|
T Consensus 16 ~~~~~rL~kEl~~l~~~~~~gi~~~p~~~----~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~ 91 (172)
T 2awf_A 16 PRGSLLLRRQLAELNKNPVEGFSAGLIDD----NDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIW 91 (172)
T ss_dssp CTTHHHHHHHHHHHHHSCCTTEEEEESST----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCC----ccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCc
Confidence 56899999999999999999999988653 59999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCC-----------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHH-HHHHHHHH
Q 031379 84 HPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAA-EYKRRVRQ 151 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~-~f~~~~r~ 151 (160)
||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|++ +|+++||+
T Consensus 92 HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~ 171 (172)
T 2awf_A 92 HPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVAR 171 (172)
T ss_dssp CTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC----------------------------
T ss_pred cCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHh
Confidence 99999999999999972 2489999999999999999999999999999999999999999 99999987
Q ss_pred H
Q 031379 152 Q 152 (160)
Q Consensus 152 ~ 152 (160)
+
T Consensus 172 ~ 172 (172)
T 2awf_A 172 C 172 (172)
T ss_dssp -
T ss_pred C
Confidence 5
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-49 Score=288.51 Aligned_cols=147 Identities=27% Similarity=0.559 Sum_probs=136.1
Q ss_pred CCh-HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEec
Q 031379 1 MSG-GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFP 79 (160)
Q Consensus 1 Ms~-~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~ 79 (160)
||+ +.+.+||++|+++++. .|+++.+.+ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~d------dl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~ 90 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTILG------GLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFM 90 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEEE------ETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEECC------CCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEe
Confidence 553 2589999999999985 477777652 789999999999999999999999999999999999999999
Q ss_pred cCcccccccC-CCcEeecCCCCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcC
Q 031379 80 QGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVG-IQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYP 157 (160)
Q Consensus 80 t~i~Hpni~~-~G~ic~~~l~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a 157 (160)
|++|||||+. +|.||+++|.+ +|+|+++|.+||.+ |+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||
T Consensus 91 t~i~HPNV~~~~G~ICL~iL~~--~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a 168 (179)
T 2z5d_A 91 NKIFHPNIDEASGTVCLDVINQ--TWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 168 (179)
T ss_dssp SCCCBTTBCTTTCBBCHHHHHH--HCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred cCCccCcCCCCCCeEecccccc--CCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 9999999998 99999999986 89999999999999 99999999999999999999999999999999999999999
Q ss_pred C
Q 031379 158 A 158 (160)
Q Consensus 158 ~ 158 (160)
.
T Consensus 169 ~ 169 (179)
T 2z5d_A 169 T 169 (179)
T ss_dssp S
T ss_pred c
Confidence 6
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3.4e-49 Score=281.99 Aligned_cols=144 Identities=26% Similarity=0.550 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCccc
Q 031379 5 IARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFH 84 (160)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~H 84 (160)
.+.+||++|++++++. |+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~-----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 73 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNN-----GSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLH 73 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEET-----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEcc-----CccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCcc
Confidence 3679999999999874 67777764 499999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCcEeecCCCCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 85 PNVYP-SGTVCLSILNEDNGWRPAITVKQILVG-IQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 85 pni~~-~G~ic~~~l~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
|||+. +|.||+++|.+ +|+|+++|.+||.+ |++||.+|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 74 Pni~~~~G~iCl~il~~--~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~ 147 (152)
T 2onu_A 74 PNVDEASGSVCLDVINQ--TWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYAS 147 (152)
T ss_dssp TTBCTTTCBBCHHHHHH--HCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CcCcCcCCeEecccccc--cCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99994 99999999987 89999999999999 789999999999999999999999999999999999999996
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-47 Score=275.49 Aligned_cols=142 Identities=27% Similarity=0.551 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEe-ecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAK-PETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGF 82 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i 82 (160)
+.+.+||++|++++ +++.|+++. +.. +|+++|+++| ||++|||+||.|++.|.||++||++||+|+|.|++
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~-----~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 76 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDP-----DDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV 76 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSST-----TCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccC-----CccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCC
Confidence 46899999999999 578899887 443 5999999998 99999999999999999999999999999999999
Q ss_pred ccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031379 83 FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 155 (160)
Q Consensus 83 ~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k 155 (160)
|||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||++++.
T Consensus 77 ~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 77 YHPNIDLEGNVCLNILRE--DWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp CBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred ccCcCCCCCeEEcccchh--hccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999987 89999999999999999999999999999999999999999999999999984
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-47 Score=278.27 Aligned_cols=143 Identities=26% Similarity=0.512 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEe-ecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAK-PETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGF 82 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i 82 (160)
+.+.+||++|++++ ++++|+++. +.. +|+++|+++| ||++|||+||.|++.|.||++||++||+|+|.|++
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~-----~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i 96 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDP-----DDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV 96 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSST-----TCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccc-----ccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccC
Confidence 56899999999999 578899887 443 5999999998 99999999999999999999999999999999999
Q ss_pred ccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHc
Q 031379 83 FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 156 (160)
Q Consensus 83 ~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~ 156 (160)
|||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||++++..
T Consensus 97 ~HPNV~~~G~iCl~iL~~--~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 97 YHPNIDLEGNVALNILRE--DWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp CBTTBCTTSBBCCGGGTT--SCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred ccCCCCCCCcEEcccccc--cCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 999999999999999987 899999999999999999999999999999999999999999999999999853
No 38
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-48 Score=279.19 Aligned_cols=143 Identities=26% Similarity=0.483 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCccc
Q 031379 5 IARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFH 84 (160)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~H 84 (160)
.+.+||++|++++++++. ++ +.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~-----~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 82 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPS-----DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILH 82 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EEC-----SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCC-----CCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCccc
Confidence 568999999999998873 33 222 599999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCcEeecCCCCCCCCCCcCCHHHHHHHH-HHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 85 PNVY-PSGTVCLSILNEDNGWRPAITVKQILVGI-QDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 85 pni~-~~G~ic~~~l~~~~~W~p~~~i~~vl~~i-~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
|||+ .+|.||+++|.+ +|+|+++|.+||.+| ++||.+|++++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 83 PNi~~~~G~iCl~iL~~--~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 83 PNVDERSGSVCLDVINQ--TWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TTBCTTTCBBCHHHHHH--HCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred ccCcccCCeEecccccc--CCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 9999 499999999987 899999999999997 79999999999999999999999999999999999999985
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.1e-46 Score=305.45 Aligned_cols=149 Identities=34% Similarity=0.676 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
++|.|||++|+++++++++.|+++.|.. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~-----~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 76 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVG-----DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 76 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEET-----TEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccc
Confidence 5789999999999999999999999876 49999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcCCC
Q 031379 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPAL 159 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a~~ 159 (160)
||||+.+|.||+++|.. +|+|++++.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++||..
T Consensus 77 HPnv~~~G~iCl~il~~--~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 77 HPNINSNGSISLDILRS--QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp CTTBCTTCBBCCGGGTT--SCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred ccccCCCCeEeCccccc--CCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999987 899999999999999999999999999999999999999999999999999999863
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=5.2e-46 Score=274.04 Aligned_cols=144 Identities=29% Similarity=0.520 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEe----ecCCCCCCCCcc---eEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCee
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAK----PETLPDGSVNLM---VWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKC 76 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~----~~~~~~~~~~~~---~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v 76 (160)
+.+.+||++|+++++ .++|+++. +.. +|++ +|+++|. |++|||+||.|++.|.||++||++||+|
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~-----~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v 99 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDS-----ADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKV 99 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTC-----CCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEE
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCC-----ccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCcee
Confidence 568999999999997 77899887 433 5899 9999997 8889999999999999999999999999
Q ss_pred EeccCcccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHc
Q 031379 77 KFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 156 (160)
Q Consensus 77 ~f~t~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~ 156 (160)
+|.|++|||||+.+|.||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|.+|+++|.++||+|++.+
T Consensus 100 ~f~t~i~HPnV~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 100 VCLKKIFHPNIDLKGNVCLNILRE--DWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp EECSCCCCTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred EEecCcccCCCCCCCeEechhccC--CCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999999999999999999999987 899999999999999999999999999999999999999999999999999765
Q ss_pred C
Q 031379 157 P 157 (160)
Q Consensus 157 a 157 (160)
.
T Consensus 178 ~ 178 (190)
T 3o2u_A 178 S 178 (190)
T ss_dssp E
T ss_pred C
Confidence 3
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.3e-45 Score=267.40 Aligned_cols=143 Identities=22% Similarity=0.452 Sum_probs=132.1
Q ss_pred CChHHHHHHHHHHHHHHHhcC------------CCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCC--CCEEEEEEEeC
Q 031379 1 MSGGIARGRLAEERKSWRKNH------------PHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWE--GGFFPLTLHFS 66 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~------------~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~--gg~f~~~i~~p 66 (160)
|| +.+.|||++|++++++++ +.++.+.+.. +|+++|+++|.||++|||+ ||.|++.|.||
T Consensus 5 Ms-~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~-----~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp 78 (167)
T 4ds2_A 5 MK-NISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDT-----DTIYNWILKVKAPADSVYGGAGNTYQLSVLFS 78 (167)
T ss_dssp CC-CCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEE-----SSTTEEEEEEECCTTSGGGTTCCEEEEEEECC
T ss_pred cc-HHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCC-----CcccEEEEEEECCCCCCccCCCCEEEEEEECC
Confidence 77 678999999999999987 6788887765 4999999999999999999 99999999999
Q ss_pred CCCCCCCCeeEeccCcccccccCCCcEeecCCCCCCCCCCcCCHHHHHH-HHHHhhcC--CCCCCCCCHHHHHHHHHCHH
Q 031379 67 EDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILV-GIQDLLDQ--PNPADPAQTEGYHLFIQDAA 143 (160)
Q Consensus 67 ~~YP~~pP~v~f~t~i~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~-~i~~ll~~--p~~~~~~n~~aa~~~~~~~~ 143 (160)
++||++||+|+|.|++|||||+.+|.||+++|.+ +|+|++++.++|. .|++++.+ |++++|+|.+||.+|++|++
T Consensus 79 ~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~--~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~ 156 (167)
T 4ds2_A 79 DDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVND--FWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQ 156 (167)
T ss_dssp TTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHT--TCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHH
T ss_pred CCCCCCCCEEEEeCCcccccCCCCCEEEcccCcC--CCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHH
Confidence 9999999999999999999999999999999987 8999999999755 67777764 89999999999999999999
Q ss_pred HHHHHHHH
Q 031379 144 EYKRRVRQ 151 (160)
Q Consensus 144 ~f~~~~r~ 151 (160)
+|+++||+
T Consensus 157 ~f~~~vrr 164 (167)
T 4ds2_A 157 DFAARVRR 164 (167)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 99999983
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=275.64 Aligned_cols=152 Identities=30% Similarity=0.524 Sum_probs=137.0
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeE----EeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCee
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFV----AKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKC 76 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~----~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v 76 (160)
|| ..+.+||++|+++|+++++.|+. +.+.. +|++.|+++|.||++|||+||+|+|.|.||++||++||+|
T Consensus 73 ~s-~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~e-----dnl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V 146 (323)
T 3ceg_A 73 NS-AARARRLAQEAVTLSTSLPLSSSSSVFVRCDE-----ERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLV 146 (323)
T ss_dssp CC-HHHHHHHHHHHHHHHHHCCCCSSCCEEEEEES-----SCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEE
T ss_pred CC-HHHHHHHHHHHHHHHhCCCCCcccceeecccC-----CCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeE
Confidence 45 78999999999999999887643 33333 4899999999999999999999999999999999999999
Q ss_pred EeccC-----cccccccCCCcEeecCCCC-----CCCCCCcC-CHHHHHHHHHHhhc--CCCCCCCCCHHH--HHHHHHC
Q 031379 77 KFPQG-----FFHPNVYPSGTVCLSILNE-----DNGWRPAI-TVKQILVGIQDLLD--QPNPADPAQTEG--YHLFIQD 141 (160)
Q Consensus 77 ~f~t~-----i~Hpni~~~G~ic~~~l~~-----~~~W~p~~-~i~~vl~~i~~ll~--~p~~~~~~n~~a--a~~~~~~ 141 (160)
+|.|+ +||||||.+|+||+++|.. .++|+|++ +|.+||.+|++||. +|++++|+|.++ +.+|.+|
T Consensus 147 ~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d 226 (323)
T 3ceg_A 147 NLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQS 226 (323)
T ss_dssp EECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHH
T ss_pred EEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhh
Confidence 99998 9999999999999999972 13899999 89999999999995 677899999987 5789999
Q ss_pred HHHHHHHHHHHHHHcCC
Q 031379 142 AAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 142 ~~~f~~~~r~~~~k~a~ 158 (160)
++.|.++||+|+.+||.
T Consensus 227 ~~~Y~~~vr~~t~k~A~ 243 (323)
T 3ceg_A 227 SREYDGNIRQATVKWAM 243 (323)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999999984
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=7.5e-44 Score=254.96 Aligned_cols=133 Identities=26% Similarity=0.435 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCc
Q 031379 4 GIARGRLAEERKSWRKN-HPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGF 82 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~-~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i 82 (160)
..+.+||++|+++++++ ++.|+++.+....| .|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d--~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i 97 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESADD--ITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKI 97 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTTC--TTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCcc--ccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccc
Confidence 34789999999999998 78899988764322 3699999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcE---eecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHC
Q 031379 83 FHPNVYPSGTV---CLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQD 141 (160)
Q Consensus 83 ~Hpni~~~G~i---c~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~ 141 (160)
|||||+.+|+| |+++|. +|+|+++|.+||.+|+++|.+|++++++|++|+.+|.+|
T Consensus 98 ~HPNV~~~G~icisCL~iL~---~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 98 EMSCVDNCGRVIKNNLHILK---NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CCTTBCTTSBBCGGGSHHHH---TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred ccCCCccCCeEehhhccccc---CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999999 888885 499999999999999999999999999999999998765
No 44
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.8e-44 Score=252.86 Aligned_cols=133 Identities=26% Similarity=0.419 Sum_probs=117.5
Q ss_pred CChHHHHHHHHHHHHHHHhc-CCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEec
Q 031379 1 MSGGIARGRLAEERKSWRKN-HPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFP 79 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~-~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~ 79 (160)
||+..+.+||++|+++++++ ++.|+++.+....| .|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d--~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDD--ITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI 79 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTC--TTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCC--CcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE
Confidence 77556889999999999998 78899988754311 3699999999999999999999999999999999999999999
Q ss_pred cCcccccccCC-CcE--eecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 031379 80 QGFFHPNVYPS-GTV--CLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLF 138 (160)
Q Consensus 80 t~i~Hpni~~~-G~i--c~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~ 138 (160)
|++|||||+.+ |+| |++++. +|+|++++.+||.+|+++|.+|++++++|++|+..|
T Consensus 80 t~i~HPnv~~~~G~i~~cL~~l~---~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 80 SKINLPCVNPTTGEVQTDFHTLR---DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp BCCCCTTBCTTTCBBCTTSHHHH---TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccccCCEeCCCCEEeeecccCC---CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99999999986 999 898875 699999999999999999999999999999987654
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4.2e-42 Score=246.44 Aligned_cols=128 Identities=24% Similarity=0.351 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-eEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCc
Q 031379 4 GIARGRLAEERKSWRKNHPHG-FVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGF 82 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~-~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i 82 (160)
..+.+||++|+++++++++.| +++.+....+ .|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d--~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 101 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDED--MTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 101 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTC--TTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCcc--ccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCc
Confidence 568899999999999998888 6666543211 1489999999999999999999999999999999999999999999
Q ss_pred cccccc-CCCcEeecCCC--CCCCCCCcCCHHHHHHHHHHhh-cCCCCCCCCCHHHH
Q 031379 83 FHPNVY-PSGTVCLSILN--EDNGWRPAITVKQILVGIQDLL-DQPNPADPAQTEGY 135 (160)
Q Consensus 83 ~Hpni~-~~G~ic~~~l~--~~~~W~p~~~i~~vl~~i~~ll-~~p~~~~~~n~~aa 135 (160)
|||||+ .+|+||+++|. + +|+|+++|.+||.+|+++| .+|++++|+|.|||
T Consensus 102 ~HPNV~~~~G~ICl~iL~~~~--~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 102 NMNGVNSSNGVVDPRAISVLA--KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CCTTBCTTTCBBCGGGSHHHH--TCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred eeCCEECCCCEEehhhcCCcc--CCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 999999 69999999997 5 8999999999999999999 56999999999986
No 46
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=6e-42 Score=237.24 Aligned_cols=118 Identities=26% Similarity=0.537 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCc-
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGF- 82 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i- 82 (160)
+.+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~-----~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 79 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVHP-----NNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPP 79 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEECT-----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCc-----chhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCC
Confidence 3478999999999999999999988754 4999999999999999999999999999999999999999999996
Q ss_pred ccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCC
Q 031379 83 FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPAD 128 (160)
Q Consensus 83 ~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 128 (160)
|||||+.+|+||+++|.+ +|+|++++.+||.+|+++|.+|+...
T Consensus 80 ~HPnv~~~G~iCl~iL~~--~W~P~~~i~~vl~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 80 KHTHVYSNGDICLSLLGD--DYNPSLSISGLVLSIISMLSSAKEKK 123 (125)
T ss_dssp CBTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHHHHC------
T ss_pred CCCcCCCCCEEEchhcCC--CCCCCCcHHHHHHHHHHHHhCccccc
Confidence 999999999999999986 89999999999999999999988643
No 47
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.3e-41 Score=234.78 Aligned_cols=116 Identities=26% Similarity=0.550 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCc-
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGF- 82 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i- 82 (160)
+.+.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~-----~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 93 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHP-----SNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPP 93 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECT-----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEecc-----ccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCC
Confidence 3578999999999999999999988754 4999999999999999999999999999999999999999999996
Q ss_pred ccccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCC
Q 031379 83 FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNP 126 (160)
Q Consensus 83 ~Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~ 126 (160)
|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|+.
T Consensus 94 ~HPnv~~~G~ICl~iL~~--~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 94 KHTHVYSNGDICLSVLGD--DYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CCTTBCTTCCBCCGGGTT--TCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCcCCCCCEEECccccC--CCCCCCcHHHHHHHHHHHHhCcCc
Confidence 999999999999999987 899999999999999999999874
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=244.77 Aligned_cols=127 Identities=24% Similarity=0.354 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHhcCCCC-eEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 5 IARGRLAEERKSWRKNHPHG-FVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~-~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
.+.+||++|+++++++++.| +++.+....| .|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 35 p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d--~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGVGDGTVSWGLEDDED--MTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CHHHHHHHHHHHHHHCCGGGCEEEEESSTTC--SSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEecCccc--ccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 47899999999999998888 5665533211 24999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCcEeecCCC--CCCCCCCcCCHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 031379 84 HPNVY-PSGTVCLSILN--EDNGWRPAITVKQILVGIQDLLD-QPNPADPAQTEGY 135 (160)
Q Consensus 84 Hpni~-~~G~ic~~~l~--~~~~W~p~~~i~~vl~~i~~ll~-~p~~~~~~n~~aa 135 (160)
||||+ .+|.||+++|. + +|+|+++|.+||.+|+++|. +|++++|+|.|||
T Consensus 113 HPNV~~~~G~ICl~iL~~~~--~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVLA--KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHHH--TCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred cCCEeCCCCEEEhhhcCCCC--CCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 99999 79999999997 5 89999999999999999996 5999999999986
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-40 Score=233.30 Aligned_cols=109 Identities=33% Similarity=0.675 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHhcCCCCeEEe--ecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc-
Q 031379 7 RGRLAEERKSWRKNHPHGFVAK--PETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF- 83 (160)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~--~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~- 83 (160)
.+||++|+++++++++.|+++. +.. +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~ 98 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQ-----NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIP 98 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCC-----CSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCc-----cccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcC
Confidence 4999999999999999999864 332 59999999999999999999999999999999999999999999999
Q ss_pred -cccccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhc
Q 031379 84 -HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLD 122 (160)
Q Consensus 84 -Hpni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~ 122 (160)
||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.
T Consensus 99 ~HPNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 99 VHPHVYSNGHICLSILTE--DWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CBTTBCTTCBBCCGGGTT--TCCTTSCHHHHHHHHHHHTC
T ss_pred CCccCCCCCeEEchhcCC--CCCCCCcHHHHHHHHHHHhC
Confidence 99999999999999987 89999999999999999984
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-38 Score=233.36 Aligned_cols=118 Identities=27% Similarity=0.498 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 4 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+.+.+||++|+++++++++.|+.+.+.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~-----~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~-- 85 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLP-----SNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP-- 85 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEET-----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC-----CccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--
Confidence 5588999999999999999999998765 499999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEeecCCCC-CCCCCCcCCHHHHHHHHHHhhcCCCCCC
Q 031379 84 HPNVYPSGTVCLSILNE-DNGWRPAITVKQILVGIQDLLDQPNPAD 128 (160)
Q Consensus 84 Hpni~~~G~ic~~~l~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 128 (160)
||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|+++.
T Consensus 86 ~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~ 131 (187)
T 2f4w_A 86 NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTL 131 (187)
T ss_dssp CSSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCT
T ss_pred CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999941 1289999999999999999999988763
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.9e-40 Score=242.51 Aligned_cols=142 Identities=18% Similarity=0.344 Sum_probs=123.0
Q ss_pred CChHHHHHHHHHHHHHHHhcC---CCCeEEeecCCCCCCCCcceEEEEeeCC-CCCCCCC-----------CEEEEEEEe
Q 031379 1 MSGGIARGRLAEERKSWRKNH---PHGFVAKPETLPDGSVNLMVWHCTIPGK-AGTDWEG-----------GFFPLTLHF 65 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~---~~~~~~~~~~~~~~~~~~~~w~~~i~Gp-~~tpy~g-----------g~f~~~i~~ 65 (160)
|| ..+.+||++|++++++++ +.++++.+.. +|+++|+++|.|| ++|||+| |.|++.|.|
T Consensus 24 ~s-~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~-----dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~f 97 (186)
T 1zuo_A 24 GS-VQASDRLMKELRDIYRSQSYKTGIYSVELIN-----DSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSF 97 (186)
T ss_dssp CC-HHHHHHHHHHHHHHHTSHHHHTTSEEEEEET-----TEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred cc-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEcC-----CccceeEEEEECCCCCCCccccchhhccccCceEEEEEEEC
Confidence 55 779999999999999987 6889988766 4999999999997 9999998 899999999
Q ss_pred CCCCCCCCCeeEeccCcccc-cccCCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHH
Q 031379 66 SEDYPSKPPKCKFPQGFFHP-NVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAE 144 (160)
Q Consensus 66 p~~YP~~pP~v~f~t~i~Hp-ni~~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~ 144 (160)
|++||++||+|+|.|++||| ||+.+|.||+++|.. ++|+|+++|.+||.+|+++|.+|+... .|..++.+
T Consensus 98 p~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~-~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~ 168 (186)
T 1zuo_A 98 KDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTK-QGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQ 168 (186)
T ss_dssp CTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGST-TTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTC
T ss_pred CCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCCC-CCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHH
Confidence 99999999999999999999 699999999999973 289999999999999999999886533 23344567
Q ss_pred HHHHHHHHHHHcC
Q 031379 145 YKRRVRQQAKQYP 157 (160)
Q Consensus 145 f~~~~r~~~~k~a 157 (160)
|.+.++.++.+.+
T Consensus 169 Y~~~~~~~~~~~~ 181 (186)
T 1zuo_A 169 YNLARAQQSYNSI 181 (186)
T ss_dssp CCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHH
Confidence 7777777666543
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=1.7e-29 Score=178.95 Aligned_cols=98 Identities=21% Similarity=0.351 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCC----------EEEEEEEeCCCCCCCCCee
Q 031379 7 RGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGG----------FFPLTLHFSEDYPSKPPKC 76 (160)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg----------~f~~~i~~p~~YP~~pP~v 76 (160)
.+||++|++.|++. +.+.. +|++.|.+++.||.||+|+|| .|.++|.||++||.+||+|
T Consensus 34 ~~RL~eE~k~L~k~------v~p~k-----~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV 102 (172)
T 2z6o_A 34 VQRLKEEYQSLIRY------VENNK-----NADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEI 102 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHH-----HTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHH------hccCc-----cccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCee
Confidence 89999999999983 34444 488999999999999999999 9999999999999999999
Q ss_pred EeccC-cccccccCCCcEeecCCCCC--CCCCCcCCHHHHHH
Q 031379 77 KFPQG-FFHPNVYPSGTVCLSILNED--NGWRPAITVKQILV 115 (160)
Q Consensus 77 ~f~t~-i~Hpni~~~G~ic~~~l~~~--~~W~p~~~i~~vl~ 115 (160)
+|.+. +||||||.+|+||++++... ..|+|.++|..+|.
T Consensus 103 ~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 103 AVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp BCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred eeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99998 99999999999999999441 14559999999985
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.82 E-value=4.3e-20 Score=131.83 Aligned_cols=115 Identities=21% Similarity=0.303 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhc-CCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCE---EEEEEEeCCCCCCCCCeeEecc---
Q 031379 8 GRLAEERKSWRKN-HPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGF---FPLTLHFSEDYPSKPPKCKFPQ--- 80 (160)
Q Consensus 8 ~Rl~~E~~~l~~~-~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~---f~~~i~~p~~YP~~pP~v~f~t--- 80 (160)
+|..+|+.++.+. +...........+| ...++.+.+.|.-.++|+|++ |.+.|.||++||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~d---G~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~ 107 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSD---GTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENF 107 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTT---SCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGC
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCC---CChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCc
Confidence 5677787776553 22222221122333 334555566666668999999 8899999999999999998865
Q ss_pred ----C---cc-cccccCCCcEeecCCCCCCCCCC-cCCHHHHHHHHHHhhcCCCCCC
Q 031379 81 ----G---FF-HPNVYPSGTVCLSILNEDNGWRP-AITVKQILVGIQDLLDQPNPAD 128 (160)
Q Consensus 81 ----~---i~-Hpni~~~G~ic~~~l~~~~~W~p-~~~i~~vl~~i~~ll~~p~~~~ 128 (160)
+ ++ |||||.+|+||+++|. +|++ +.++.++|.+|.++|.+|+++.
T Consensus 108 ~m~~~~~~I~~hpnVD~~G~I~lpyL~---~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 108 DMNTISSSLPIQEYIDSNGWIALPILH---AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp CTTTSCTTSTHHHHBCTTSBBCCGGGG---SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccccCCCCCCCCCCcEeCcccc---cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 1 77 9999999999999994 5999 5799999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.76 E-value=4.1e-20 Score=128.13 Aligned_cols=86 Identities=23% Similarity=0.414 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCC----------EEEEEEEeCCCCCCCCCe
Q 031379 6 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGG----------FFPLTLHFSEDYPSKPPK 75 (160)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg----------~f~~~i~~p~~YP~~pP~ 75 (160)
=..||.+||..|-+- .-.+. .+-..|...+.||.||+|.|+ .|++++.||.+||.+||.
T Consensus 35 w~~RlkeEy~alI~y-------v~~nK----~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPe 103 (168)
T 3kpa_A 35 WTARLKEEYASLITY-------VEHNK----ASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPE 103 (168)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHH----HTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCC
T ss_pred HHHHHHHHHHHHHHH-------HHhcc----cccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCE
Confidence 468999999988542 11111 134569999999999999999 999999999999999999
Q ss_pred eEeccC-cccccccCCCcEeecCCCCCCCCCCc
Q 031379 76 CKFPQG-FFHPNVYPSGTVCLSILNEDNGWRPA 107 (160)
Q Consensus 76 v~f~t~-i~Hpni~~~G~ic~~~l~~~~~W~p~ 107 (160)
|+|.+. .+|||+|.+|+||+++. |+|.
T Consensus 104 I~Fp~ldgkt~kmYr~GkICLdIh-----wkPl 131 (168)
T 3kpa_A 104 IALPELEGKTVKMYRGGKICMTTH-----FFPL 131 (168)
T ss_dssp CBCGGGTTTCSSEETTTEECCCTT-----HHHH
T ss_pred eecccccCcCccccCCCcEEeccc-----cchh
Confidence 999995 89999999999999984 6654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.60 E-value=1.4e-15 Score=106.82 Aligned_cols=79 Identities=23% Similarity=0.464 Sum_probs=70.3
Q ss_pred CCcceEEEEeeCCCCCCCCCCEEE--EEEEeCCCCCCCCCeeEeccC------cccccccCCCcEeecCCCCCCCCCC-c
Q 031379 37 VNLMVWHCTIPGKAGTDWEGGFFP--LTLHFSEDYPSKPPKCKFPQG------FFHPNVYPSGTVCLSILNEDNGWRP-A 107 (160)
Q Consensus 37 ~~~~~w~~~i~Gp~~tpy~gg~f~--~~i~~p~~YP~~pP~v~f~t~------i~Hpni~~~G~ic~~~l~~~~~W~p-~ 107 (160)
.+++.|.++|. .+|+|++|. +.|.||++||++||.| |.++ ..|||||.+|+||+++|. +|++ .
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~---~W~~~~ 122 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH---EWKHPQ 122 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH---TCCTTT
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc---ccCCCC
Confidence 68999999998 579999998 5999999999999999 6654 589999999999999995 4988 6
Q ss_pred CCHHHHHHHHHHhhcC
Q 031379 108 ITVKQILVGIQDLLDQ 123 (160)
Q Consensus 108 ~~i~~vl~~i~~ll~~ 123 (160)
.++.+++..+++.|.+
T Consensus 123 snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 123 SDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8999999999999943
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.81 E-value=0.02 Score=38.40 Aligned_cols=67 Identities=21% Similarity=0.275 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 7 RGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
..+...|+..|..-=+..+... . .....+.+.+....+..-..-.+.+.+.||++||.+||.|.+.+
T Consensus 12 ~e~q~~EleaL~sIy~d~~~~~--~-----~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 12 GEEQRNELEALESIYPDSFTVL--S-----ENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEC--C-----SSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHccCceEEc--c-----CCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4566788988887655555432 1 12355566665322222233478899999999999999998654
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.29 E-value=0.076 Score=35.47 Aligned_cols=69 Identities=14% Similarity=0.108 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCC--CCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 9 RLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDW--EGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 9 Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy--~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
+...|+..|+.-=+..+....... ..+...+.+.+..+.+..- ..-.+.+.|.||++||..+|.|...+
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~---~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNG---RTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTT---SSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCC---CCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 567888888876555554431110 0123445555553222111 12468899999999999999998765
No 58
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.10 E-value=0.051 Score=39.11 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCccccccc
Q 031379 9 RLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVY 88 (160)
Q Consensus 9 Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~Hpni~ 88 (160)
+|.+|+.++ |+.-....+ .++....+.+..-. |..+.++|.++.+||.+||.+...-+. |.
T Consensus 5 ~li~Ei~~i------GW~~l~~id----~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~-- 65 (186)
T 3zqs_A 5 SLIEEIGTL------GWDKLVYAD----TCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF-- 65 (186)
T ss_dssp SHHHHHHHH------CGGGEEEEC----TTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC--
T ss_pred HHHHHHHHh------CCceeeeec----CCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc--
Confidence 677888877 322111111 47888888888533 679999999999999999988654332 11
Q ss_pred CCCcEeecCCCCCCCCCCcCCHHHHHHHHHHhhc
Q 031379 89 PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLD 122 (160)
Q Consensus 89 ~~G~ic~~~l~~~~~W~p~~~i~~vl~~i~~ll~ 122 (160)
.. .|.+..++.+++...+..+.
T Consensus 66 ----------~~--~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 ----------CA--SWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp ----------CC--CCCTTCCHHHHHHHHHHHHH
T ss_pred ----------cc--ccCCCccHHHHHHHHHHHHH
Confidence 11 79999999999888777663
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.29 Score=32.99 Aligned_cols=71 Identities=13% Similarity=0.175 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhcCCCCeEEeecCCCCC--CCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEecc
Q 031379 8 GRLAEERKSWRKNHPHGFVAKPETLPDG--SVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 8 ~Rl~~E~~~l~~~~~~~~~~~~~~~~~~--~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
.+-..|+..|..-=+..+...... ..+ ......+.+.+.+..+ .-..-.+.+.+.+|++||..||.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~-~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIYMDDFTDLTKR-KSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTSSSSEECCSTT-SSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHChhhheecccc-cccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 445777888876544333321100 000 0123556677763222 1123477899999999999999998754
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.74 E-value=0.13 Score=34.35 Aligned_cols=66 Identities=15% Similarity=0.109 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhcCCC--CeEEeecCCCCCCCCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEec
Q 031379 9 RLAEERKSWRKNHPH--GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFP 79 (160)
Q Consensus 9 Rl~~E~~~l~~~~~~--~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~ 79 (160)
+...|+..|+.-=+. .+....... .+...+.+.+.. .+..=..-.+.+.+.+|.+||..||.|.+.
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~----~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSE----TDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECS----SSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCC----CCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 356778777764222 232211000 123566777763 221011247899999999999999999754
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.00 E-value=0.99 Score=31.15 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=20.8
Q ss_pred EEEEEEEeCCCCCCCCCeeEecc
Q 031379 58 FFPLTLHFSEDYPSKPPKCKFPQ 80 (160)
Q Consensus 58 ~f~~~i~~p~~YP~~pP~v~f~t 80 (160)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998654
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.56 E-value=1.1 Score=30.04 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhcCCCCeEEeecCCCCC-CCCcceEEEEeeCCCC-C-CCCCCEEEEEEEeCCCCCCCCCeeEec
Q 031379 7 RGRLAEERKSWRKNHPHGFVAKPETLPDG-SVNLMVWHCTIPGKAG-T-DWEGGFFPLTLHFSEDYPSKPPKCKFP 79 (160)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~-~~~~~~w~~~i~Gp~~-t-py~gg~f~~~i~~p~~YP~~pP~v~f~ 79 (160)
..+...|+..|+.-=+..+....... .+ ........+.+. +.+ + .-..-.+.+.|.||++||..+|.|.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~-~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDA-RGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCC-SSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcc-cCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 34567888888775544444321100 00 001344555665 222 1 001246889999999999999999874
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.09 E-value=0.46 Score=32.69 Aligned_cols=24 Identities=21% Similarity=0.353 Sum_probs=20.8
Q ss_pred EEEEEEEeCCCCCCCCCeeEeccC
Q 031379 58 FFPLTLHFSEDYPSKPPKCKFPQG 81 (160)
Q Consensus 58 ~f~~~i~~p~~YP~~pP~v~f~t~ 81 (160)
.+.+.+.+|.+||..||.|.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999986653
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=84.77 E-value=0.18 Score=33.03 Aligned_cols=36 Identities=3% Similarity=-0.077 Sum_probs=0.0
Q ss_pred cCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHcC
Q 031379 122 DQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYP 157 (160)
Q Consensus 122 ~~p~~~~~~n~~aa~~~~~~~~~f~~~~r~~~~k~a 157 (160)
.-.....|.+...|++|.++++.|...||.|+.-||
T Consensus 19 ~~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a 54 (108)
T 2cwb_A 19 KGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDA 54 (108)
T ss_dssp ------------------------------------
T ss_pred cCcccCCchhHHHHHHHHhchhccccccccccccCc
Confidence 334556889999999999999999999999995555
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=68.83 E-value=3.6 Score=18.92 Aligned_cols=20 Identities=30% Similarity=0.375 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHhcCCCCe
Q 031379 6 ARGRLAEERKSWRKNHPHGF 25 (160)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~ 25 (160)
.+.||.-|+..++.+++.|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 57899999999999998874
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=31.06 E-value=1.4e+02 Score=20.95 Aligned_cols=45 Identities=16% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCcceEEEEeeCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEeccCcc
Q 031379 37 VNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFF 83 (160)
Q Consensus 37 ~~~~~w~~~i~Gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~ 83 (160)
+.-..|.+.+.|+.+.-...-+=++.+.+.+.||. |...+..+.|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 56779999999987654444466889999999974 6666655433
No 67
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=30.82 E-value=18 Score=16.51 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=8.3
Q ss_pred CCCCCeeEeccCcccc
Q 031379 70 PSKPPKCKFPQGFFHP 85 (160)
Q Consensus 70 P~~pP~v~f~t~i~Hp 85 (160)
|..-|.-.|..+.|||
T Consensus 4 pmtlpenyfserpyhp 19 (26)
T 2jrw_A 4 PMTLPENYFSERPYHP 19 (26)
T ss_dssp CCCCSSSSCCSSSCCS
T ss_pred ccccchhhcccCCCCC
Confidence 3334444466666665
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=26.85 E-value=54 Score=23.60 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=21.1
Q ss_pred CCCEEEEEEEeCCCCCC-----CCCeeEec
Q 031379 55 EGGFFPLTLHFSEDYPS-----KPPKCKFP 79 (160)
Q Consensus 55 ~gg~f~~~i~~p~~YP~-----~pP~v~f~ 79 (160)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 35889999999999998 78888774
No 69
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=25.28 E-value=66 Score=16.66 Aligned_cols=14 Identities=21% Similarity=0.188 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHH
Q 031379 5 IARGRLAEERKSWR 18 (160)
Q Consensus 5 ~~~~Rl~~E~~~l~ 18 (160)
...+||..|+++++
T Consensus 28 ~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 28 SKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 46899999999875
No 70
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=23.68 E-value=38 Score=22.89 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=25.1
Q ss_pred CCCCeeEec---cCcccccccCCCcEeecCCCC
Q 031379 71 SKPPKCKFP---QGFFHPNVYPSGTVCLSILNE 100 (160)
Q Consensus 71 ~~pP~v~f~---t~i~Hpni~~~G~ic~~~l~~ 100 (160)
..||.|.+. +.--|++|-.+|..|+++|..
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 368988884 456789999999999999977
No 71
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=22.00 E-value=1.3e+02 Score=18.85 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=18.4
Q ss_pred CCEEEEEEEeCCCCCCCCCeeEec
Q 031379 56 GGFFPLTLHFSEDYPSKPPKCKFP 79 (160)
Q Consensus 56 gg~f~~~i~~p~~YP~~pP~v~f~ 79 (160)
+..+...|.|+..|+- +|+|.+.
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~ 50 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLS 50 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEE
Confidence 3467889999998884 8999774
No 72
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=21.76 E-value=42 Score=20.69 Aligned_cols=10 Identities=20% Similarity=0.232 Sum_probs=8.4
Q ss_pred HHHHHHHHHH
Q 031379 6 ARGRLAEERK 15 (160)
Q Consensus 6 ~~~Rl~~E~~ 15 (160)
.+|||++|++
T Consensus 63 QLKRvQRdlr 72 (87)
T 2rf4_B 63 QLKRIQRDFK 72 (87)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 5789999987
No 73
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=21.67 E-value=50 Score=17.71 Aligned_cols=42 Identities=17% Similarity=0.316 Sum_probs=28.6
Q ss_pred HHHHHhhcCCCCCCCC-CHHHHHHHHHCHHHHHHHHHHHHHHcCC
Q 031379 115 VGIQDLLDQPNPADPA-QTEGYHLFIQDAAEYKRRVRQQAKQYPA 158 (160)
Q Consensus 115 ~~i~~ll~~p~~~~~~-n~~aa~~~~~~~~~f~~~~r~~~~k~a~ 158 (160)
..|...+.+|+ +|. +..+-...+.|+......++.-+.+|+.
T Consensus 4 qqLl~tlksp~--sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 4 QDLLRTLKSPS--SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHTCCSCC--CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHhcCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 33444445555 332 4566677889999999999988888864
No 74
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=20.71 E-value=97 Score=19.63 Aligned_cols=46 Identities=7% Similarity=-0.184 Sum_probs=24.5
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCCeEEeecCCCCCCCCcceEEEEeeCCC
Q 031379 1 MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKA 50 (160)
Q Consensus 1 Ms~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~Gp~ 50 (160)
||++.-.+++++..++. +-.-.+.+.+...-+ +...++.+.+.||.
T Consensus 17 mSTsllv~km~~~a~~~--gi~v~i~a~~~~~~~--~~~~~~DvvLLgPQ 62 (108)
T 3nbm_A 17 GTSAQLANAINEGANLT--EVRVIANSGAYGAHY--DIMGVYDLIILAPQ 62 (108)
T ss_dssp SHHHHHHHHHHHHHHHH--TCSEEEEEEETTSCT--TTGGGCSEEEECGG
T ss_pred CCHHHHHHHHHHHHHHC--CCceEEEEcchHHHH--hhccCCCEEEEChH
Confidence 56666677777776643 322223223332211 34455777888765
No 75
>2ahq_A Sigma-54, RNA polymerase sigma factor RPON; sigma-54,sigma factors, solution structure, transcription; NMR {Aquifex aeolicus} PDB: 2o8k_A 2o9l_A
Probab=20.32 E-value=26 Score=21.10 Aligned_cols=49 Identities=12% Similarity=0.280 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCC-CHHHHHHHHHCHHHHHHHHHHHHHHcCCC
Q 031379 108 ITVKQILVGIQDLLDQPNPADPA-QTEGYHLFIQDAAEYKRRVRQQAKQYPAL 159 (160)
Q Consensus 108 ~~i~~vl~~i~~ll~~p~~~~~~-n~~aa~~~~~~~~~f~~~~r~~~~k~a~~ 159 (160)
.+-..|-..|..++.+.+...|+ +.+++.+.++. =...+|+-|.||-.+
T Consensus 16 ~S~~~Ik~~Ik~lI~~Ed~~kPlSD~~I~~~L~~~---Gi~IaRRTVaKYRe~ 65 (76)
T 2ahq_A 16 LTQGELMKLIKEIVENEDKRKPYSDQEIANILKEK---GFKVARRTVAKYREM 65 (76)
T ss_dssp CCHHHHHHHHHHHGGGCCSSSCCCHHHHHHHHTTT---SSCCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHc---CCCccHHHHHHHHHH
Confidence 46788888999999888888887 44556666432 224466666666543
No 76
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=20.21 E-value=1.1e+02 Score=17.40 Aligned_cols=20 Identities=5% Similarity=0.082 Sum_probs=17.4
Q ss_pred CCHHHHHHHHHCHHHHHHHH
Q 031379 130 AQTEGYHLFIQDAAEYKRRV 149 (160)
Q Consensus 130 ~n~~aa~~~~~~~~~f~~~~ 149 (160)
-|++.+.+..+|+++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 48999999999999998765
No 77
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=20.01 E-value=1.8e+02 Score=20.00 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=28.5
Q ss_pred CcceEEEEeeCCCC-------------CCCCCCEEEEEEEeCCCCCCCCCe
Q 031379 38 NLMVWHCTIPGKAG-------------TDWEGGFFPLTLHFSEDYPSKPPK 75 (160)
Q Consensus 38 ~~~~w~~~i~Gp~~-------------tpy~gg~f~~~i~~p~~YP~~pP~ 75 (160)
+-.+|.++..|..+ +|-.-|.++|.+.-+.=-|.+-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 45699999999665 577889999999986555555554
Done!