BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031381
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64764|TRXO1_ARATH Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana GN=At2g35010
PE=2 SV=1
Length = 194
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 64 SLQFHRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVI 123
SL R+L S G + +++++S EEF +++ K +D SLP++FYFTAAWCGPC+FI PVI
Sbjct: 69 SLPHRRSLCSEAGGENGVVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVI 128
Query: 124 GELSAKHPHVTTYKIDIDQVGGI 146
ELS ++P VTTYK+DID+ GGI
Sbjct: 129 VELSKQYPDVTTYKVDIDE-GGI 150
>sp|Q93VQ9|TRXO2_ARATH Thioredoxin O2, mitochondrial OS=Arabidopsis thaliana GN=At1g31020
PE=2 SV=1
Length = 159
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 47 RNYIPASSS---QSQSQMLPSLQFHRTLFSSPDGP-SNILVIESGEEFNSSLGKVKDDSL 102
RN A+S+ ++ L + +R F +G S+ +V++S EFNS+L K +D SL
Sbjct: 13 RNSFLAASTVYVSNEFNFLNTSLLNRRSFCFAEGDRSSFVVLKSEAEFNSALSKARDGSL 72
Query: 103 PAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQVG 144
P++FYFTAAWCGPC+ I PVI ELS K+P VTTYK+DID+ G
Sbjct: 73 PSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEGG 114
>sp|Q655X0|TRXO_ORYSJ Thioredoxin O, mitochondrial OS=Oryza sativa subsp. japonica
GN=Os06g0665900 PE=2 SV=2
Length = 174
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 74 SPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHV 133
S G S+++V+ S E F S + KV+ + LPA+FY+TA WCGPC+ + PVI +LS+++P +
Sbjct: 57 SSSGDSSMVVVGSAESFTSIMSKVEAEKLPAVFYYTAVWCGPCRAMAPVISKLSSRYPKI 116
Query: 134 TTYKIDIDQVG 144
YK+DID G
Sbjct: 117 PIYKVDIDMDG 127
>sp|Q6ES52|TDX_ORYSJ TPR repeat-containing thioredoxin TDX OS=Oryza sativa subsp.
japonica GN=Os09g0401200 PE=2 SV=1
Length = 317
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
+++ I S E ++ L S + YFTAAWCGPC+FI PV L+ KH +V K+D
Sbjct: 209 DVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKVD 268
Query: 140 IDQVGGIWRFW 150
ID++ + W
Sbjct: 269 IDELNSVAYRW 279
>sp|Q96419|TRXH_FAGES Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1
Length = 116
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
+ ++ + +E+N K KD + FTA+WCGPC+ I P + EL+ K PHV +K+
Sbjct: 5 AQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKV 64
Query: 139 DIDQVGGI 146
D+D + +
Sbjct: 65 DVDDLKDV 72
>sp|Q43636|TRXH_RICCO Thioredoxin H-type OS=Ricinus communis PE=3 SV=1
Length = 118
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 88 EEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQVGGIW 147
E +N L K D + FTA+WCGPC+FI P + EL+ K P+VT K+D+D++ +
Sbjct: 15 EAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVA 74
Query: 148 RFW 150
W
Sbjct: 75 HEW 77
>sp|Q9CAS1|TRXH8_ARATH Thioredoxin H8 OS=Arabidopsis thaliana GN=TRX8 PE=2 SV=1
Length = 148
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
I+ I++ ++ S L +KD + + FTA WCGPCK + P + EL+AK+ V KID+
Sbjct: 39 IVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKIDV 98
Query: 141 DQVGGIW 147
D + +W
Sbjct: 99 DVLMSVW 105
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
++ + +EF++ + K K+ I FTA+WCGPC+FI PV E + K P K+D+
Sbjct: 8 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67
Query: 141 DQV 143
D++
Sbjct: 68 DEL 70
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
++ + +EF++ + K K+ I FTA+WCGPC+FI PV E + K P K+D+
Sbjct: 8 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67
Query: 141 DQV 143
D++
Sbjct: 68 DEL 70
>sp|P29449|TRXH1_TOBAC Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1
Length = 126
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 88 EEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQVGGIW 147
EE+N K + + FTA+WCGPC+FI P++ +++ K PHV K+D+D++ +
Sbjct: 21 EEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVS 80
Query: 148 RFW 150
W
Sbjct: 81 AEW 83
>sp|Q07090|TRXH2_TOBAC Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1
Length = 118
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
++ + + + +N L K DD + FTA+WCGPCKFI EL+ K P VT K+D
Sbjct: 6 QVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVD 65
Query: 140 IDQVGGIWRFW 150
+D++ + W
Sbjct: 66 VDELKSVATDW 76
>sp|O64432|TRXH_BRARA Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1
Length = 123
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
++ + E++N+ L K+ + + FTA WC PC+FI P+ EL+ KH V +K+D
Sbjct: 12 EVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVD 71
Query: 140 IDQVGGIWR 148
+D++ + +
Sbjct: 72 VDELATVAK 80
>sp|P68176|TRXH_BRAOL Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1
Length = 123
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
++ + E++N+ L K+ + + FTA WC PC+FI P+ EL+ KH V +K+D
Sbjct: 12 EVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVD 71
Query: 140 IDQVGGI 146
+D++ +
Sbjct: 72 VDELATV 78
>sp|P68177|TRXH1_BRANA Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1
Length = 123
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
++ + E++N+ L K+ + + FTA WC PC+FI P+ EL+ KH V +K+D
Sbjct: 12 EVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVD 71
Query: 140 IDQVGGI 146
+D++ +
Sbjct: 72 VDELATV 78
>sp|Q8VWG7|TDX_ARATH TPR repeat-containing thioredoxin TDX OS=Arabidopsis thaliana
GN=TDX PE=1 SV=1
Length = 380
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 105 IFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQVGGIWRFW 150
I YFTA WCGPC+++ P+ L+ +H V K+DID+ + W
Sbjct: 296 ILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDIDKANDVAASW 341
>sp|P29448|TRXH1_ARATH Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1
Length = 114
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 72 FSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHP 131
+S +G ++ + E +N L K + + FTA+WCGPC+FI P +L+ K P
Sbjct: 1 MASEEG--QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP 58
Query: 132 HVTTYKIDIDQVGGIWRFW 150
+V K+D D++ + W
Sbjct: 59 NVLFLKVDTDELKSVASDW 77
>sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX1 PE=1 SV=3
Length = 103
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 85 ESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQVG 144
++ EF+S++ + D L + F A WCGPCK I P+I + S ++P YK+D+D++G
Sbjct: 6 KTASEFDSAIAQ---DKL-VVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELG 61
Query: 145 GIWR 148
+ +
Sbjct: 62 DVAQ 65
>sp|O65049|TRXH_PICMA Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1
Length = 125
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
N+ S E + S L + D FTA WCGPC+ I PV ELS K P +
Sbjct: 2 AEGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFL 61
Query: 137 KIDIDQVGGIWRFW 150
K+D+D++ + + W
Sbjct: 62 KVDVDELRDVAQEW 75
>sp|Q9AS75|TRH41_ORYSJ Thioredoxin H4-1 OS=Oryza sativa subsp. japonica GN=Os01g0168200
PE=2 SV=1
Length = 131
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
N+ VI + E ++ + + D I F+AAWCGPC+ I PV E+S +P I
Sbjct: 21 GNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYAEMSQTYPQFMFLTI 80
Query: 139 DIDQV 143
D+D++
Sbjct: 81 DVDEL 85
>sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1
Length = 106
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 96 KVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQV 143
KV D + P + F A WCGPCK I P + +LS H + YK+D+D++
Sbjct: 15 KVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDEL 62
>sp|Q0DKF1|TRH42_ORYSJ Thioredoxin H4-2 OS=Oryza sativa subsp. japonica GN=Os05g0169000
PE=2 SV=1
Length = 132
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
N+ VI S E+++ + + D + F+A+WCGPC+ I P+ E+S +P + I
Sbjct: 22 GNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGPCRVIAPIYAEMSKTYPQLMFLTI 81
Query: 139 DIDQV 143
D+D +
Sbjct: 82 DVDDL 86
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 108 FTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDID 141
F A WCGPCK + PV+ L+A+ PHVT K+DID
Sbjct: 23 FFAEWCGPCKMLTPVLEALAAELPHVTILKVDID 56
>sp|Q39241|TRXH5_ARATH Thioredoxin H5 OS=Arabidopsis thaliana GN=TRX5 PE=1 SV=1
Length = 118
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
G ++ + E +N + + + FTA+WC PC+FI PV E++ K +V +
Sbjct: 3 GEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFF 62
Query: 137 KIDIDQVGGI 146
KID+D++ +
Sbjct: 63 KIDVDELQAV 72
>sp|Q851R5|TRH22_ORYSJ Thioredoxin H2-2 OS=Oryza sativa subsp. japonica GN=Os03g0800700
PE=2 SV=1
Length = 134
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 67 FHRTLFSSP-----DGPSNILVIESGEEFNSSLGKVKDDSLPAIFY-FTAAWCGPCKFIW 120
F T+F+ P G S ++ + S ++ G K + I F+A WCGPC+FI
Sbjct: 4 FFSTMFTPPPAADDGGDSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCGPCRFIE 63
Query: 121 PVIGELSAKHPHVTTYKIDIDQVGGIWRFW 150
P +++ + +KID+D++ + R W
Sbjct: 64 PAFKDMAGRFADAVFFKIDVDELSEVARQW 93
>sp|Q42403|TRXH3_ARATH Thioredoxin H3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1
Length = 118
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
++ + E++ L + + FTA WC PC+FI PV +L+ KH V +
Sbjct: 3 AEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFF 62
Query: 137 KIDIDQVGGI 146
K+D+D++ +
Sbjct: 63 KVDVDELNTV 72
>sp|Q6Z4I3|TRH21_ORYSJ Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800
PE=2 SV=1
Length = 138
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
G S ++ + S +++ K+ + + F+A+WCGPCK + PV E++ + V
Sbjct: 19 GESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFL 78
Query: 137 KIDIDQVGGIWRFW 150
K+D+D++ + R W
Sbjct: 79 KVDVDELAEVARTW 92
>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX2 PE=1 SV=3
Length = 104
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQV 143
++S E++S+L D L + +F A WCGPCK I P+I + + ++ YK+D+D+V
Sbjct: 5 LKSASEYDSALAS--GDKLVVVDFF-ATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEV 61
Query: 144 GGIWR 148
+ +
Sbjct: 62 SDVAQ 66
>sp|Q9C9Y6|TRXH9_ARATH Thioredoxin H9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1
Length = 140
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 68 HRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELS 127
H FS N+ +I + E ++ L + D + F+A WCGPCK + P ELS
Sbjct: 16 HNVEFSG----GNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELS 71
Query: 128 AKHPHVTTYKIDIDQVGGIWRFW 150
KH + +D+D++ W
Sbjct: 72 EKHSSLMFLLVDVDELSDFSSSW 94
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 108 FTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDID 141
F A WCGPCK + PV+ L+A+ P+VT K+DID
Sbjct: 23 FFAEWCGPCKMLTPVLEALAAELPYVTILKLDID 56
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 108 FTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
F A WCGPC+ + P++ L+A+ PHVT KI+ID+
Sbjct: 23 FFAEWCGPCRMLTPILENLAAELPHVTIGKINIDE 57
>sp|Q9XIF4|TRXH7_ARATH Thioredoxin H7 OS=Arabidopsis thaliana GN=TRX7 PE=2 SV=1
Length = 129
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
++ IES ++ S +K + + FTA WCGPCK + P + E+++K+ ++D+
Sbjct: 23 VVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAVFARVDV 82
Query: 141 DQ---VGGIWR 148
D+ V G +R
Sbjct: 83 DRLMDVAGTYR 93
>sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3
Length = 127
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
G ++ + S E++ + + + FTA+WCGPC+ + P+ +L+ K P
Sbjct: 16 GAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFL 75
Query: 137 KIDIDQV 143
K+D+D++
Sbjct: 76 KVDVDEL 82
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 97 VKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHP-HVTTYKIDIDQ 142
V + LP + F A+WCGPCK I PVIG+LS ++ + YK++ D+
Sbjct: 80 VVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDE 126
>sp|Q86VQ3|TXND2_HUMAN Thioredoxin domain-containing protein 2 OS=Homo sapiens GN=TXNDC2
PE=1 SV=4
Length = 553
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 16 RQVLNPNSTNIAKSLISH-STNNTTVPKIPSFRNYIPAS--SSQSQSQMLPS-----LQF 67
+Q + P +I KSL +PK P P S +S + PS L+
Sbjct: 379 KQAIQPKEGDIPKSLEEAIPPKEIDIPKSPE-ETIQPKEDDSPKSLEEATPSKEGDILKP 437
Query: 68 HRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELS 127
P+G + VI S E+F +SL K + L A+ F+A WCGPC+ I P LS
Sbjct: 438 EEETMEFPEG-DKVKVILSKEDFEASL-KEAGERLVAV-DFSATWCGPCRTIRPFFHALS 494
Query: 128 AKHPHVTTYKIDIDQVGGIWR 148
KH V ++D D + R
Sbjct: 495 VKHEDVVFLEVDADNCEEVVR 515
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 97 VKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHP-HVTTYKIDIDQVGGI 146
V + +P + F A WCGPCK I PVI EL+ ++ + YK++ D+ GI
Sbjct: 88 VLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGI 138
>sp|P85801|TRXH_POPJC Thioredoxin H-type OS=Populus jackii PE=1 SV=1
Length = 139
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
N+ +I + E ++ L + D + F+A WCGPCK I P ELS +P + ID
Sbjct: 25 NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVID 84
Query: 140 IDQVGGIWRFW 150
+D++ W
Sbjct: 85 VDELSDFSASW 95
>sp|P80028|TRXH_CHLRE Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3
Length = 113
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELS 127
+++VI+S +++ L K K++ P + FTA WCGPCK I P+ LS
Sbjct: 3 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLS 51
>sp|O96952|THIO_GEOCY Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1
Length = 106
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
+++ +F+ +L D + + FTA+WCGPC+ I P E++ + P V YK+D+D+
Sbjct: 5 LKTKADFDQALKDAGDKLV--VIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDE 61
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 63 PSLQFHRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPV 122
P+ FH T S ++ G +F +V + P + F A WCGPCK + P
Sbjct: 48 PARTFHTTRVCS-----TTFNVQDGPDFQD---RVVNSETPVVVDFHAQWCGPCKILGPR 99
Query: 123 IGELSAK-HPHVTTYKIDIDQ 142
+ ++ AK H V K+DID
Sbjct: 100 LEKMVAKQHGKVVMAKVDIDD 120
>sp|Q38879|TRXH2_ARATH Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2
Length = 133
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 78 PSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYK 137
PS +L S + ++K+ + + F+A+WCGPC+ I P I ++ K V K
Sbjct: 24 PSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVK 83
Query: 138 IDIDQV 143
+D+D++
Sbjct: 84 LDVDEL 89
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 101 SLPAIFYFTAAWCGPCKFIWPVIGELSA-KHPHVTTYKIDID 141
S P + F A WCGPCK + PV+ E++A K +T KID+D
Sbjct: 23 SKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVD 64
>sp|Q1ZXE0|THIO4_DICDI Putative thioredoxin-4 OS=Dictyostelium discoideum GN=trxD PE=3
SV=2
Length = 104
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 104 AIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQVG 144
I F A WCG CK + P+ +LS ++P VT K++ID++
Sbjct: 22 VIINFGAEWCGACKVLEPIFNKLSTQYPLVTFLKVEIDKIN 62
>sp|O34357|YTPP_BACSU Thioredoxin-like protein YtpP OS=Bacillus subtilis (strain 168)
GN=ytpP PE=2 SV=1
Length = 107
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
IES +E + VKDD ++F F+A WC C+F+ P + EL A P T Y +D D+
Sbjct: 4 IESTQELEKA---VKDDW--SVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDK 57
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAK-HPHVTTYKIDID 141
I+ G +F +V + P + F A WCGPCK + P + ++ AK H V K+DID
Sbjct: 64 IQDGPDFQD---RVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|P11232|THIO_RAT Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2
Length = 105
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
+ +IES E F +L D + + F+A WCGPCK I P L K+ +V ++D+
Sbjct: 2 VKLIESKEAFQEALAAAGDKLV--VVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDV 59
Query: 141 DQVGGI 146
D +
Sbjct: 60 DDCQDV 65
>sp|P10639|THIO_MOUSE Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3
Length = 105
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
+ +IES E F +L D + + F+A WCGPCK I P L K+ +V ++D+
Sbjct: 2 VKLIESKEAFQEALAAAGDKLV--VVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDV 59
Query: 141 DQVGGI 146
D +
Sbjct: 60 DDCQDV 65
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 97 VKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHP-HVTTYKIDIDQ 142
V + LP + + A WCGPCK I PV+G+LS ++ + YK++ D+
Sbjct: 87 VMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDE 133
>sp|Q8LD49|TRXX_ARATH Thioredoxin X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2
SV=2
Length = 182
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 85 ESGE-EFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKH-PHVTTYKIDID 141
E GE EF+S+ V + + P + F A WCGPCK I+P + LS ++ +T KID D
Sbjct: 73 EIGESEFSST---VLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHD 128
>sp|P29446|THIO2_DICDI Thioredoxin-2 (Fragment) OS=Dictyostelium discoideum GN=trxB PE=3
SV=1
Length = 88
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
S ++ I S EE + L + + F+AAWCGPC+ I PV +LS + T +
Sbjct: 2 SRVIHISSNEELDKHLQAER-----LVIDFSAAWCGPCRAISPVFEKLSNEFVTFTFVHV 56
Query: 139 DIDQVGG 145
DID++ G
Sbjct: 57 DIDKLSG 63
>sp|Q68Y00|THIO_RICTY Thioredoxin OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=trxA PE=3 SV=1
Length = 105
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 95 GKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAK-HPHVTTYKIDIDQ 142
+V + LP I F A WCGPCK + P+I E+S + V K++ID+
Sbjct: 12 NEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDE 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,932,355
Number of Sequences: 539616
Number of extensions: 2272586
Number of successful extensions: 6303
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 6010
Number of HSP's gapped (non-prelim): 348
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)