BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031383
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana
GN=At3g01520 PE=1 SV=2
Length = 175
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 29/174 (16%)
Query: 1 MNTNERRVVVAVDESE---------ESMHALSWCLNNLFSPDTNN-TLVLLYVKPPLPVH 50
M + +V+VAV+ S A W L + +T++ ++LL+V+
Sbjct: 1 MGSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQ------ 54
Query: 51 SSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVY--RNFQNNIHVKRVVGC------ 102
D G+ + + + E + + N+A+ ++ F N H + VGC
Sbjct: 55 -VVDEDGFDDVDSIYASPEDFRDMRQS---NKAKGLHLLEFFVNKCH-EIGVGCEAWIKT 109
Query: 103 GDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKH 156
GD KDVIC V+++ D LV+GS G G ++ +G+VS +C KH +CPV+ +K
Sbjct: 110 GDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKR 163
>sp|P74148|Y1388_SYNY3 Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1388 PE=3 SV=1
Length = 154
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 7 RVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP----PLPVHSSFDAAGYIFSN 62
+++VA+D SE + L + ++ L++ Y P L ++ SF I +
Sbjct: 5 KILVALDRSELAKEVLQQAIA--LGQKESSQLMVFYCIPVDSQDLSIYPSFYGEAAIGFS 62
Query: 63 DVIKA----VEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEA 118
+IK + A E + S++ + + ++ + + V G+ I + +A
Sbjct: 63 QIIKEHLEEQQTEAREWLQSIVQQVQ------EDGVACEWDVKVGEPGRWIRDMAKNWDA 116
Query: 119 DTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKH 156
D +V+G G + LGSVS Y HV+C V+IV+H
Sbjct: 117 DLVVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQH 154
>sp|Q57951|Y531_METJA Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0531 PE=3 SV=1
Length = 170
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYV---KP--PLPVHSSFDAAGYIF 60
+++V+ D S+ S+ A +N + + + + +YV P LP S++ +
Sbjct: 27 KKIVIPTDGSDVSLEAAKHAIN--IAKEFDAEVYAIYVVDVSPFVGLPAEGSWELISELL 84
Query: 61 SNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEADT 120
+ E++ V AE + IH + + G + I EK +AD
Sbjct: 85 KEE--------GQEALKKVKKMAE----EWGVKIHTEMLEGV--PANEIVEFAEKKKADL 130
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPEEN 160
+VMG+ G ++R LLGSV++ K+ CPV++VK P++
Sbjct: 131 IVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKPKKE 170
>sp|Q57997|Y577_METJA Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0577 PE=1 SV=1
Length = 162
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 66 KAVEKYASESVNSVMNRAEAVYRNFQNNIH-----VKRVVGCGDAKDVICGTVEKLEADT 120
K+VE++ +E N + A+ N + + VK ++ G + I E D
Sbjct: 64 KSVEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDI 123
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKH 156
++MGSHG +K LLGSV++ K PV++VK
Sbjct: 124 IIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKR 159
>sp|P64922|Y2028_MYCBO Universal stress protein Mb2028c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2028c PE=3 SV=1
Length = 295
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 23/154 (14%)
Query: 8 VVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYV-------KPPLPVHSSFDAAGYIF 60
VVV VD S ES A W + + N L +++V PP+P ++
Sbjct: 10 VVVGVDGSLESDAAACWGATD--AAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDE 67
Query: 61 SNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEADT 120
++ K A E+V + +R +V + V +V + EA+
Sbjct: 68 GRQIVANAVKLAKEAVGA--DRKLSVKSELVFSTPVPTMVEISN------------EAEM 113
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIV 154
+V+GS G G + R LLGSVS + CPV ++
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 85 AVYRNFQNNIHVKRVVGCG-DAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYC 143
A ++ ++ V RVV C A+ ++ + A +V+GSHG G + LLGSVS+
Sbjct: 225 AGWQERYPDVPVSRVVVCDRPARKLVQ---KSASAQLVVVGSHGRGGLTGMLLGSVSNAV 281
Query: 144 AKHVKCPVVIVKH 156
+ PV++ +
Sbjct: 282 LHAARVPVIVARQ 294
>sp|P64921|Y2005_MYCTU Universal stress protein Rv2005c/MT2061 OS=Mycobacterium
tuberculosis GN=Rv2005c PE=1 SV=1
Length = 295
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 23/154 (14%)
Query: 8 VVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYV-------KPPLPVHSSFDAAGYIF 60
VVV VD S ES A W + + N L +++V PP+P ++
Sbjct: 10 VVVGVDGSLESDAAACWGATD--AAMRNIPLTVVHVVNADVATWPPMPYPETWGVWQEDE 67
Query: 61 SNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEADT 120
++ K A E+V + +R +V + V +V + EA+
Sbjct: 68 GRQIVANAVKLAKEAVGA--DRKLSVKSELVFSTPVPTMVEISN------------EAEM 113
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIV 154
+V+GS G G + R LLGSVS + CPV ++
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 85 AVYRNFQNNIHVKRVVGCG-DAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYC 143
A ++ ++ V RVV C A+ ++ + A +V+GSHG G + LLGSVS+
Sbjct: 225 AGWQERYPDVPVSRVVVCDRPARKLVQ---KSASAQLVVVGSHGRGGLTGMLLGSVSNAV 281
Query: 144 AKHVKCPVVIVKH 156
+ PV++ +
Sbjct: 282 LHAARVPVIVARQ 294
>sp|P67091|USPF_SALTY Universal stress protein F OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspF PE=3 SV=1
Length = 144
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 40 LLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV 99
L V P LP ++S G +S + + A++ +E+ + + EA+ + F N+ RV
Sbjct: 37 FLTVIPSLPYYASL---GLAYSAE-LPAMDDLKAEAKSQL----EAIIKKF--NLPADRV 86
Query: 100 ---VGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
V G KD I +KL AD +++ SH I LLGS + +H +C V++V+
Sbjct: 87 QAHVAEGSPKDKILEMAKKLPADMVIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P67092|USPF_SALTI Universal stress protein F OS=Salmonella typhi GN=uspF PE=3 SV=1
Length = 144
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 40 LLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV 99
L V P LP ++S G +S + + A++ +E+ + + EA+ + F N+ RV
Sbjct: 37 FLTVIPSLPYYASL---GLAYSAE-LPAMDDLKAEAKSQL----EAIIKKF--NLPADRV 86
Query: 100 ---VGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
V G KD I +KL AD +++ SH I LLGS + +H +C V++V+
Sbjct: 87 QAHVAEGSPKDKILEMAKKLPADMVIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P72817|Y1654_SYNY3 Universal stress protein Sll1654 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1654 PE=3 SV=1
Length = 157
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 74 ESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKR 133
E+V ++ A+AV+ Q I K + G A IC +++ AD +VMG G G
Sbjct: 78 EAVAKLLEAAQAVFS--QQGIATKTIEREGMASFTICDVADEVNADLIVMGCRGLGLTTE 135
Query: 134 ALLGSVSDYCAKHVKCPVVIV 154
+ SV+ CPV++V
Sbjct: 136 GVAESVTARVINLSPCPVLVV 156
>sp|O53472|Y2026_MYCTU Universal stress protein Rv2026c/MT2085 OS=Mycobacterium
tuberculosis GN=Rv2026c PE=2 SV=1
Length = 294
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 117 EADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIV 154
+A +V+GS G G + R LLGS+S H +CPV I+
Sbjct: 110 QAWLMVVGSQGMGALGRLLLGSISTALLHHARCPVAII 147
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 117 EADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
+A +V+GSHG G LLGSVS A V+ PV++V+
Sbjct: 254 QAQLVVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
>sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC167.05 PE=1 SV=2
Length = 601
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 10 VAVDESEESMHALSWCLNNLFSPDTNNTLVLLYV-----KPPLPVHSSFDAAGYIFSNDV 64
+ +D S ES+HA W + L +TL+++ V V ++ +
Sbjct: 435 LTLDLSSESLHAAEWAVGILLR--NGDTLIIVDVIECDDPSARAVKDRMESEQLETLEKI 492
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEADTLVMG 124
K + K S++V V E ++ H K AK +I ++ +E +VMG
Sbjct: 493 TKYILKLLSKTVLEVEVNIEVIH-------HEK-------AKHLIIEMIDYIEPSLVVMG 538
Query: 125 SHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
S G +K LLGS S+Y PV++ +
Sbjct: 539 SRGRSHLKGVLLGSFSNYLVNKSSVPVMVAR 569
>sp|O27222|Y1154_METTH Universal stress protein MTH_1154 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1154 PE=3 SV=1
Length = 146
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 55 AAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQN-NIHVKRVVGCGDAKDVICGTV 113
A ++ V + + K ++ N ++ E +N N+ + V+ GD D I
Sbjct: 44 AVPFLTPKKVKEMMVKELTQRGNEILRDMEKGLTGPENPNVSFRAVMREGDPADEIVKVA 103
Query: 114 EKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
E+ + D +VMG+ G + + LLGSVS+ + C + +V+
Sbjct: 104 EEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 144
>sp|Q2FXL6|Y1819_STAA8 Putative universal stress protein SAOUHSC_01819 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_01819 PE=3 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q6GFZ7|Y1788_STAAR Putative universal stress protein SAR1788 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR1788 PE=3 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q5HF64|Y1759_STAAC Putative universal stress protein SACOL1759 OS=Staphylococcus
aureus (strain COL) GN=SACOL1759 PE=3 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q99TF3|Y1710_STAAM Putative universal stress protein SAV1710 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV1710 PE=1 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q2FG28|Y1656_STAA3 Putative universal stress protein SAUSA300_1656 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_1656 PE=3 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q7A0N0|Y1653_STAAW Putative universal stress protein MW1653 OS=Staphylococcus aureus
(strain MW2) GN=MW1653 PE=3 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q6G8L7|Y1637_STAAS Putative universal stress protein SAS1637 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS1637 PE=3 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q2YTD0|Y1569_STAAB Putative universal stress protein SAB1569 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB1569 PE=3 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|Q7A551|Y1532_STAAN Putative universal stress protein SA1532 OS=Staphylococcus aureus
(strain N315) GN=SA1532 PE=1 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKP-PLPVHSSFDAAGYIFSNDV 64
+ +++AVD S H W N N L V +SS++ ++
Sbjct: 5 KNILIAVDGS----HEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYE----VYDAQF 56
Query: 65 IKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRV---VGCGDAKDVICGTV-EKLEADT 120
+ + +A E +N Y+ N VK V + G K +I + ++ AD
Sbjct: 57 TEKSKHFAEELLNG--------YKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADL 108
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 109 IMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEE 146
>sp|P74897|YQA3_THEAQ Universal stress protein in QAH/OAS sulfhydrylase 3'region
OS=Thermus aquaticus PE=3 SV=1
Length = 137
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 69 EKYASESVNSVMNRAEAVYRNFQNNIHVKR---VVGCGDAKDVICGTVEKLEADTLVMGS 125
E + E++ + RAE V V R ++ G + I +AD +VMG+
Sbjct: 48 EPFFEEALKRRLERAEKVRAEAMALTGVPREDALLLQGRPAEAILQAAIGEKADLIVMGT 107
Query: 126 HGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
G G + LGS S CPV++V+
Sbjct: 108 RGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137
>sp|O07552|NHAX_BACSU Stress response protein NhaX OS=Bacillus subtilis (strain 168)
GN=nhaX PE=2 SV=2
Length = 166
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 7 RVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLY----------VKPPLPV-HSSFDA 55
R++VA D SE S AL ++ + N + + + + PP P +S+ +
Sbjct: 6 RIIVAFDGSENSKKALLTAID--LAKTVNAAITVAHSHDMKDNQTVIDPPRPAAEASYIS 63
Query: 56 AGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGC-----GDAKDVIC 110
G D + + S +R E V + ++ ++ G GD + I
Sbjct: 64 GGMTSVPDPL--ISDVTSPEPMIYEDRTEEVIAEARMMLNEQQADGDIDILEGDPAESII 121
Query: 111 GTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
++ AD +V GS +K+ + GSVS+ + PV+IVK
Sbjct: 122 EHANRISADMIVTGSRDQNRLKKLIFGSVSEKLSAKSDIPVLIVK 166
>sp|P42297|YXIE_BACSU Universal stress protein YxiE OS=Bacillus subtilis (strain 168)
GN=yxiE PE=3 SV=1
Length = 148
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 7 RVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYV-KPPLPVHSSFDAAGYI---FSN 62
+++VA+D S+ S AL ++ + + L +L+V + + SS Y+ F +
Sbjct: 4 KMLVAIDGSDMSAKALDAAVH--LAKEQQAELSILHVGREAVVTTSSLTGIVYVPEHFID 61
Query: 63 DVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEADTLV 122
++ V+K E + + N E + + + + + G+ I ++ +V
Sbjct: 62 EIRNEVKK---EGLKILENAKE---KAAEKGVQAETIYANGEPAHEILNHAKEKGVSLIV 115
Query: 123 MGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
+GS G +K +LGSVS ++ CPV+IV+
Sbjct: 116 VGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148
>sp|A0QZA1|Y3950_MYCS2 Universal stress protein MSMEG_3950/MSMEI_3859 OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3950
PE=1 SV=1
Length = 294
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 114 EKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
E +A +V+GSHG G LLGSVS A+ PV++V+
Sbjct: 251 EAKQAQLVVVGSHGRGGFTGMLLGSVSSRVAQSATTPVMVVR 292
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 2 NTNERRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKPPLPVHSSFDAAGYIFS 61
+ E ++V VD S ES A+ W D TL+ + PV S+ A Y+ +
Sbjct: 4 SATEYGILVGVDSSAESDAAVRWAAREASLHDAPITLMHVIA----PVVVSWPAGPYMAT 59
Query: 62 NDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTV--EKLEAD 119
V++ E+ A ++ +A+ V + H V K+ + T+ A
Sbjct: 60 --VLECQEENARHAIE----QAQKVVADCLGETH-GLTVQTEIRKESVARTLIDASKSAQ 112
Query: 120 TLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIV 154
+V+G+ G G + R LLGS S + PVV+V
Sbjct: 113 MVVVGNRGMGALGRVLLGSTSTSLLHYASGPVVVV 147
>sp|P0AAC3|USPE_SHIFL Universal stress protein E OS=Shigella flexneri GN=uspE PE=3 SV=2
Length = 316
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 52 SFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICG 111
FD + Y ND I+ A +++ E N HV++ G ++VI
Sbjct: 211 EFDPSVY---NDAIRGQHLLAMKALRQKFGINE-------NMTHVEK----GLPEEVIPD 256
Query: 112 TVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
E L+A +V+G+ G I A LG+ ++ H++C ++++K
Sbjct: 257 LAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 300
>sp|P0AAC0|USPE_ECOLI Universal stress protein E OS=Escherichia coli (strain K12) GN=uspE
PE=1 SV=2
Length = 316
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 52 SFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICG 111
FD + Y ND I+ A +++ E N HV++ G ++VI
Sbjct: 211 EFDPSVY---NDAIRGQHLLAMKALRQKFGINE-------NMTHVEK----GLPEEVIPD 256
Query: 112 TVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
E L+A +V+G+ G I A LG+ ++ H++C ++++K
Sbjct: 257 LAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 300
>sp|P0AAC1|USPE_ECOL6 Universal stress protein E OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspE PE=3 SV=2
Length = 316
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 52 SFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICG 111
FD + Y ND I+ A +++ E N HV++ G ++VI
Sbjct: 211 EFDPSVY---NDAIRGQHLLAMKALRQKFGINE-------NMTHVEK----GLPEEVIPD 256
Query: 112 TVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
E L+A +V+G+ G I A LG+ ++ H++C ++++K
Sbjct: 257 LAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 300
>sp|P0AAC2|USPE_ECO57 Universal stress protein E OS=Escherichia coli O157:H7 GN=uspE PE=3
SV=2
Length = 316
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 52 SFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICG 111
FD + Y ND I+ A +++ E N HV++ G ++VI
Sbjct: 211 EFDPSVY---NDAIRGQHLLAMKALRQKFGINE-------NMTHVEK----GLPEEVIPD 256
Query: 112 TVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
E L+A +V+G+ G I A LG+ ++ H++C ++++K
Sbjct: 257 LAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK 300
>sp|P72745|Y1101_SYNY3 Universal stress protein Slr1101 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1101 PE=3 SV=1
Length = 108
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 103 GDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
G +IC ++ +D +V+G G + LLGSV +Y H C V +V P+
Sbjct: 53 GSPGKIICQRAKQDNSDIIVVGHRGRWGLSEILLGSVGNYVFHHAHCCVFVVPTPD 108
>sp|P64996|Y2346_MYCBO Universal stress protein Mb2346c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2346c PE=3 SV=1
Length = 292
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 46 PLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDA 105
P P + DA ++S + A A E+ + A+ + ++ + H R V G
Sbjct: 42 PTPSLARVDAEYELWSEQLAAA---SAREAQRYLRRLADGIEVSYHHRAH--RSVSAG-- 94
Query: 106 KDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVI 153
+ VE+LEA+ LV+GS G R L+GS +D PV I
Sbjct: 95 ---LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139
>sp|P64995|Y2319_MYCTU Universal stress protein Rv2319c/MT2382 OS=Mycobacterium
tuberculosis GN=Rv2319c PE=3 SV=1
Length = 292
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 46 PLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDA 105
P P + DA ++S + A A E+ + A+ + ++ + H R V G
Sbjct: 42 PTPSLARVDAEYELWSEQLAAA---SAREAQRYLRRLADGIEVSYHHRAH--RSVSAG-- 94
Query: 106 KDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVI 153
+ VE+LEA+ LV+GS G R L+GS +D PV I
Sbjct: 95 ---LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139
>sp|Q8ZP84|USPE_SALTY Universal stress protein E OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspE PE=3 SV=3
Length = 315
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 52 SFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICG 111
FD + Y ND I+ A +++ + E V HV++ G ++VI
Sbjct: 211 EFDPSVY---NDAIRGQHLLAMKALRQKFSIDEKV-------THVEK----GLPEEVIPD 256
Query: 112 TVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPEE 159
E L+A +V+G+ G + A LG+ ++ H++C ++++K P+E
Sbjct: 257 LAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVIDHLRCDLLVIK-PDE 303
>sp|Q8Z788|USPE_SALTI Universal stress protein E OS=Salmonella typhi GN=uspE PE=3 SV=3
Length = 315
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 52 SFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICG 111
FD + Y ND I+ A +++ + E V HV++ G ++VI
Sbjct: 211 EFDPSVY---NDAIRGQHLLAMKALRQKFSIDEKV-------THVEK----GLPEEVIPD 256
Query: 112 TVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPEE 159
E L+A +V+G+ G + A LG+ ++ H++C ++++K P+E
Sbjct: 257 LAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVIDHLRCDLLVIK-PDE 303
>sp|Q49YE0|Y1056_STAS1 Putative universal stress protein SSP1056 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1056 PE=3 SV=1
Length = 167
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKPPLPVHSSFDAA----GYIFS 61
+ +++AVD S E+ A + ++ D T+V + + +DA FS
Sbjct: 5 KSILIAVDGSHEAEWAFNKAVDVAKRNDAKLTVVNVIDSRTYSSYEVYDAQFTEKSKNFS 64
Query: 62 NDVIKAVEKYASES-VNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTV-EKLEAD 119
+D++K ++ A+ + V +V R E G K +I + ++AD
Sbjct: 65 DDLLKGYKEVATNAGVKNVETRLE-----------------FGSPKAIIPKKLATDVDAD 107
Query: 120 TLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 108 LIMCGTSGLNAVERFIVGSVSEAIVRHSPCDVLVVRTEE 146
>sp|P95192|Y3134_MYCTU Universal stress protein Rv3134c/MT3220 OS=Mycobacterium
tuberculosis GN=Rv3134c PE=2 SV=1
Length = 268
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 60/152 (39%), Gaps = 21/152 (13%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKPPLPVHSSFDAAGYIFSNDVI 65
R VVV +D S + HA W ++ + D L L+YV P S AAG
Sbjct: 8 RAVVVGIDGSRAATHAALWAVDEAVNRDI--PLRLVYVIDP----SQLSAAGEGGGQSAA 61
Query: 66 KAVEKYASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEADTLVMGS 125
+A AS V + + ++ V CG + + E A L +GS
Sbjct: 62 RAALHDASRKVEAT-----------GQPVKIETEVLCG--RPLTKLMQESRSAAMLCVGS 108
Query: 126 HGYGFIKRALLGSVSDYCAKHVKCPVVIVKHP 157
G + R GSV+ A CPV ++ HP
Sbjct: 109 VGLDHV-RGRRGSVAATLAGSALCPVAVI-HP 138
>sp|P67093|USPG_SALTY Universal stress protein G OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspG PE=3 SV=1
Length = 142
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 30 FSPDTNNTLVLLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRN 89
F + + LL+V P S + + F+ DV + E E+ R + + +
Sbjct: 26 FLAQQDGVIHLLHVLP-----GSASMSLHRFAADVRRFEEHLQHEA----ETRLQTMVGH 76
Query: 90 FQ-NNIHVKRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVK 148
F + +K V G +DV+ E+L+AD +V+GS I LLGS + +H
Sbjct: 77 FSIDPSRIKTHVRFGSVRDVVNEMGEELDADVVVIGSRNPS-ITTHLLGSNASSVVRHAT 135
Query: 149 CPVVIVK 155
PV++V+
Sbjct: 136 LPVLVVR 142
>sp|P67094|USPG_SALTI Universal stress protein G OS=Salmonella typhi GN=uspG PE=3 SV=1
Length = 142
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 30 FSPDTNNTLVLLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRN 89
F + + LL+V P S + + F+ DV + E E+ R + + +
Sbjct: 26 FLAQQDGVIHLLHVLP-----GSASMSLHRFAADVRRFEEHLQHEA----ETRLQTMVGH 76
Query: 90 FQ-NNIHVKRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVK 148
F + +K V G +DV+ E+L+AD +V+GS I LLGS + +H
Sbjct: 77 FSIDPSRIKTHVRFGSVRDVVNEMGEELDADVVVIGSRNPS-ITTHLLGSNASSVVRHAT 135
Query: 149 CPVVIVK 155
PV++V+
Sbjct: 136 LPVLVVR 142
>sp|Q4L751|Y1215_STAHJ Putative universal stress protein SH1215 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH1215 PE=3 SV=1
Length = 165
Score = 36.6 bits (83), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 6 RRVVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKPPLPVHSSFDAA----GYIFS 61
+ +++AVD S E+ A + ++ D T+V + + +DA FS
Sbjct: 5 KNILIAVDGSHEAEWAFNKAVDVAKRNDAKLTIVNIIDSRTYSSYEVYDAQFTEKSRSFS 64
Query: 62 NDVIKAVEKYASES-VNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTV-EKLEAD 119
+++K ++ A+ + V +V R E G K +I + +L D
Sbjct: 65 EELLKGYQEVATRAGVTNVETRLE-----------------FGSPKAIIPKKLASELGVD 107
Query: 120 TLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPE 158
++ G+ G ++R ++GSVS+ +H C V++V+ E
Sbjct: 108 LIMCGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVRTEE 146
>sp|Q8CS61|Y1385_STAES Putative universal stress protein SE_1385 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1385 PE=3 SV=1
Length = 166
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 87 YRNFQNNIHVKRV---VGCGDAKDVICGTVEK-LEADTLVMGSHGYGFIKRALLGSVSDY 142
Y+ N VK V + G K +I + + + AD ++ G+ G ++R ++GSVS+
Sbjct: 71 YKEVATNAGVKNVDTRLEFGSPKAIIPKKLARDVGADLIMSGTSGLNAVERFIVGSVSEA 130
Query: 143 CAKHVKCPVVIVKHPE 158
+H C V++V+ E
Sbjct: 131 IVRHAPCDVLVVRTEE 146
>sp|Q5HNJ5|Y1273_STAEQ Putative universal stress protein SERP1273 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1273 PE=3
SV=1
Length = 166
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 87 YRNFQNNIHVKRV---VGCGDAKDVICGTVEK-LEADTLVMGSHGYGFIKRALLGSVSDY 142
Y+ N VK V + G K +I + + + AD ++ G+ G ++R ++GSVS+
Sbjct: 71 YKEVATNAGVKNVDTRLEFGSPKAIIPKKLARDVGADLIMSGTSGLNAVERFIVGSVSEA 130
Query: 143 CAKHVKCPVVIVKHPE 158
+H C V++V+ E
Sbjct: 131 IVRHAPCDVLVVRTEE 146
>sp|P37903|USPF_ECOLI Universal stress protein F OS=Escherichia coli (strain K12) GN=uspF
PE=1 SV=2
Length = 144
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 40 LLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQ---NNIHV 96
L V P LP ++S G +S + + A++ +E+ ++ E + + F+ + +HV
Sbjct: 37 FLTVIPSLPYYASL---GLAYSAE-LPAMDDLKAEA----KSQLEEIIKKFKLPTDRVHV 88
Query: 97 KRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
V G KD I +K+ A +++ SH I LLGS + +H +C V++V+
Sbjct: 89 H--VEEGSPKDRILELAKKIPAHMIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P0A4P8|USPF_SHIFL Universal stress protein F OS=Shigella flexneri GN=uspF PE=3 SV=1
Length = 144
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 40 LLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQ---NNIHV 96
L V P LP ++S G +S + + A++ +E+ + + E + + F+ + +HV
Sbjct: 37 FLTVIPSLPYYASL---GLAYSAE-LPAMDDLKAEAKSQL----EEIIKKFKLPTDRVHV 88
Query: 97 KRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
V G KD I +K+ A +++ SH I LLGS + +H +C V++V+
Sbjct: 89 H--VEEGSPKDRILELAKKIPAHMIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P0A4P6|USPF_ECOL6 Universal stress protein F OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspF PE=3 SV=1
Length = 144
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 40 LLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQ---NNIHV 96
L V P LP ++S G +S + + A++ +E+ + + E + + F+ + +HV
Sbjct: 37 FLTVIPSLPYYASL---GLAYSAE-LPAMDDLKAEAKSQL----EEIIKKFKLPTDRVHV 88
Query: 97 KRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
V G KD I +K+ A +++ SH I LLGS + +H +C V++V+
Sbjct: 89 H--VEEGSPKDRILELAKKIPAHMIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|Q0TI19|USPF_ECOL5 Universal stress protein F OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=uspF PE=3 SV=1
Length = 144
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 40 LLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQ---NNIHV 96
L V P LP ++S G +S + + A++ +E+ + + E + + F+ + +HV
Sbjct: 37 FLTVIPSLPYYASL---GLAYSAE-LPAMDDLKAEAKSQL----EEIIKKFKLPTDRVHV 88
Query: 97 KRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
V G KD I +K+ A +++ SH I LLGS + +H +C V++V+
Sbjct: 89 H--VEEGSPKDRILELAKKIPAHMIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P0A4P7|USPF_ECO57 Universal stress protein F OS=Escherichia coli O157:H7 GN=uspF PE=3
SV=1
Length = 144
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 40 LLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRNFQ---NNIHV 96
L V P LP ++S G +S + + A++ +E+ + + E + + F+ + +HV
Sbjct: 37 FLTVIPSLPYYASL---GLAYSAE-LPAMDDLKAEAKSQL----EEIIKKFKLPTDRVHV 88
Query: 97 KRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
V G KD I +K+ A +++ SH I LLGS + +H +C V++V+
Sbjct: 89 H--VEEGSPKDRILELAKKIPAHMIIIASHRPD-ITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|O74782|YGBA_SCHPO Universal stress protein A family protein C25B2.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC25B2.10 PE=1 SV=1
Length = 307
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 103 GDAKDVICGTVEKLEADTLVMGSHGYGFIK-RALL--GSVSDYCAKHVKCPVVIVK 155
G +D+I T+ D+L++G+ G ++LL GSVS +C + PV++V+
Sbjct: 222 GKPQDMILRTIHVYSPDSLIVGTRGKALNSFQSLLSSGSVSKFCLQKSPIPVIVVR 277
>sp|Q50777|Y1538_METTM Universal stress protein MTBMA_c15380 OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=MTBMA_c15380 PE=3 SV=1
Length = 143
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 69 EKYASESVNSVMNRAEAVYRNFQN--------NIHVKRVVGCGDAKDVICGTVEKLEADT 120
+K V + R + + R+ + N+ + V+ G+ D I E+ + D
Sbjct: 48 KKVKEMMVKELTERGKEILRDMEKGLTGPENPNVKFRGVMLEGNPADEIVKLAEEEDVDV 107
Query: 121 LVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVK 155
++MG+ G + + LLGSVS+ + C + +V+
Sbjct: 108 IIMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 141
>sp|P39177|USPG_ECOLI Universal stress protein G OS=Escherichia coli (strain K12) GN=uspG
PE=1 SV=2
Length = 142
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 30 FSPDTNNTLVLLYVKPPLPVHSSFDAAGYIFSNDVIKAVEKYASESVNSVMNRAEAVYRN 89
F + + LL+V P S + + F+ DV + E E+ R + + +
Sbjct: 26 FLAQDDGVIHLLHVLP-----GSASLSLHRFAADVRRFEEHLQHEA----QERLQTMVSH 76
Query: 90 FQ-NNIHVKRVVGCGDAKDVICGTVEKLEADTLVMGSHGYGFIKRALLGSVSDYCAKHVK 148
F + +K+ V G +D + E+L AD +V+GS I LLGS + +H
Sbjct: 77 FTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPS-ISTHLLGSNASSVIRHAN 135
Query: 149 CPVVIVK 155
PV++V+
Sbjct: 136 LPVLVVR 142
>sp|P0A5F8|Y2019_MYCBO Universal stress protein Mb2019 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2019 PE=3 SV=1
Length = 317
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 24/160 (15%)
Query: 8 VVVAVDESEESMHALSWCLNNLFSPDTNNTLVLLYVKPPLPVHSSFDAAGYIFSNDVIKA 67
+VV VD S S A+ W + + N L ++ V PP+ G+ F +
Sbjct: 10 IVVGVDGSPCSHTAVEWAARD--AQMRNVALRVVQVVPPVITAPE----GWAFEYSRFQE 63
Query: 68 VEK-------YASESVNSVMNRAEAVYRNFQNNIHVKRVVGCGDAKDVICGTVEKLEAD- 119
+K Y + ++ +A V ++ ++ G +V+ G + A+
Sbjct: 64 AQKREIVEHSYLVAQAHQIVEQAHKVALEASSSGRAAQITG-----EVLHGQIVPTLANI 118
Query: 120 -----TLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIV 154
+V+G G G + ALLGSVS +H PV ++
Sbjct: 119 SRQVAMVVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVI 158
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 118 ADTLVMGSHGYGFIKRALLGSVSDYCAKHVKCPVVIVKHPEE 159
A +V+GSHG G LGSVS + PV++ + P++
Sbjct: 271 AQLVVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIPQD 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,357,986
Number of Sequences: 539616
Number of extensions: 2290222
Number of successful extensions: 5677
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 5615
Number of HSP's gapped (non-prelim): 85
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)