BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031384
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O67166|PROA_AQUAE Gamma-glutamyl phosphate reductase OS=Aquifex aeolicus (strain VF5)
GN=proA PE=3 SV=2
Length = 435
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 5 RGLLCRSFALKNE----VIETADGAQQVEEEEEKKEMEKPRET-LLYSIAPLPLLFDAAL 59
R L ++KNE V E D + +EE +K++EK +E L ++ +L D +
Sbjct: 16 RELTSLKTSVKNETLLKVAELIDKNRDYIKEENRKDVEKAKEMGLRPAVVDRLVLNDKRI 75
Query: 60 PGA----GTVRALFGPFVELVKSWNLPDWL 85
G V +L P E++K WNLP+ L
Sbjct: 76 DGMVKVLKDVASLPDPVGEIIKMWNLPNGL 105
>sp|Q9UZK7|IF2P_PYRAB Probable translation initiation factor IF-2 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=infB PE=3 SV=1
Length = 992
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 104 YGTYLGFCIRYSDDMEEKAKAKDL 127
YG LGF ++ ++D EE AKAKD+
Sbjct: 802 YGVILGFNVKVNEDAEEVAKAKDV 825
>sp|O58822|IF2P_PYRHO Probable translation initiation factor IF-2 OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=infB PE=3 SV=1
Length = 1044
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 104 YGTYLGFCIRYSDDMEEKAKAKDLHPKLLGGMFF 137
YG LGF ++ ++D +E AKAK++ P +G + +
Sbjct: 854 YGVILGFNVKVNEDAKEVAKAKEV-PIFVGNIIY 886
>sp|Q9SDL7|HMT1_ARATH Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1
PE=1 SV=1
Length = 326
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 89 GHPGNMAVVLFAMGGYGTYLGFCIRYSDDMEEKA---KAKDLHPKLL 132
GH N A+V ++G YG YL YS E K KD H + L
Sbjct: 119 GHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRL 165
>sp|Q6PFM1|S20AB_DANRE Sodium-dependent phosphate transporter 1-B OS=Danio rerio
GN=slc20a1b PE=2 SV=1
Length = 665
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 17 EVIETADGAQQVEEEEEKKEMEKPRETLLYS-IAPLPLLFDAALPGAGTVRALFGPFVEL 75
E+++ G+ + EE++ + +KP ++L+ + L F + G V GP V L
Sbjct: 474 EMVDEDAGSSRSSLEEDRTDADKPEVSMLFQFLQILTACFGSFAHGGNDVSNAIGPLVAL 533
Query: 76 ---------VKSWNLPDWLVHWGHPG 92
+ S P WL+ +G G
Sbjct: 534 WLVYESGSVISSAPTPIWLLLYGGVG 559
>sp|Q14BI2|GRM2_MOUSE Metabotropic glutamate receptor 2 OS=Mus musculus GN=Grm2 PE=2 SV=2
Length = 872
Score = 29.6 bits (65), Expect = 9.3, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 69 FGPFVELVKSWNLPDWLVHWGHPGNMAVVLFA-MGGYGTY--LGFCIRYSDDMEEKAKAK 125
+ P L + LP + WG + V A +G T LG +R++ KA +
Sbjct: 544 YWPNASLTGCFELPQEYIRWGDAWAVGPVTIACLGALATLFVLGVFVRHNATPVVKASGR 603
Query: 126 DLHPKLLGGMFFFFAL 141
+L LLGG+F + +
Sbjct: 604 ELCYILLGGVFLCYCM 619
>sp|Q14416|GRM2_HUMAN Metabotropic glutamate receptor 2 OS=Homo sapiens GN=GRM2 PE=2 SV=2
Length = 872
Score = 29.3 bits (64), Expect = 9.5, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 69 FGPFVELVKSWNLPDWLVHWGHPGNMAVVLFA-MGGYGTY--LGFCIRYSDDMEEKAKAK 125
+ P L + LP + WG + V A +G T LG +R++ KA +
Sbjct: 544 YWPNASLTGCFELPQEYIRWGDAWAVGPVTIACLGALATLFVLGVFVRHNATPVVKASGR 603
Query: 126 DLHPKLLGGMFFFFAL 141
+L LLGG+F + +
Sbjct: 604 ELCYILLGGVFLCYCM 619
>sp|P31421|GRM2_RAT Metabotropic glutamate receptor 2 OS=Rattus norvegicus GN=Grm2 PE=1
SV=1
Length = 872
Score = 29.3 bits (64), Expect = 9.7, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 69 FGPFVELVKSWNLPDWLVHWGHPGNMAVVLFA-MGGYGTY--LGFCIRYSDDMEEKAKAK 125
+ P L + LP + WG + V A +G T LG +R++ KA +
Sbjct: 544 YWPNASLTGCFELPQEYIRWGDAWAVGPVTIACLGALATLFVLGVFVRHNATPVVKASGR 603
Query: 126 DLHPKLLGGMFFFFAL 141
+L LLGG+F + +
Sbjct: 604 ELCYILLGGVFLCYCM 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,378,638
Number of Sequences: 539616
Number of extensions: 2890260
Number of successful extensions: 11265
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 11253
Number of HSP's gapped (non-prelim): 23
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)