BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031386
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64792|PIGP_ARATH Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Arabidopsis thaliana GN=At1g61280 PE=2 SV=1
Length = 137
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 104/123 (84%), Gaps = 3/123 (2%)
Query: 38 GPKTSEVYGFVGSITTVVATGIFLVWAYVPERCLNAIGIYYYPSRYWALAVPAYAMVTLV 97
GPKTSEVYGFVGSI+ VVAT IFL+W YVP++ L +IGIYYYPS+YWA+A+P Y+MVTL+
Sbjct: 10 GPKTSEVYGFVGSISIVVATVIFLIWGYVPDKFLESIGIYYYPSKYWAMAMPMYSMVTLL 69
Query: 98 LALVFYIGLNFMSTPSPTSLNKMFDEFTREASSYSP---EGDDRPIEPISDISIDKINAL 154
+ALVFYIGLNFMST PTSLN +FD+++RE ++ P G+DRPI+PISDI I +IN L
Sbjct: 70 VALVFYIGLNFMSTSKPTSLNTLFDDYSREDVNFLPLMKNGEDRPIDPISDIDITRINDL 129
Query: 155 MFN 157
MF+
Sbjct: 130 MFD 132
>sp|Q5R946|PIGP_PONAB Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Pongo abelii GN=PIGP PE=2 SV=1
Length = 134
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 44 VYGFVGSITTVVATGIFLVWAYVPERCLNAIGIYYYPSRYWALAVPAYAMVTLVLALVFY 103
+YGFV +++ ++LVWA++PE LN++G+ Y+P +YWA+A+P Y ++ +V+ V
Sbjct: 14 IYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAIVIGYVLL 73
Query: 104 IGLNFMSTPSPTSLNKMFDEFTREASSYSPEGDDRPIEPISDISIDKINALMF 156
G+N MST S++ + D + R + + I + DISI ++N + F
Sbjct: 74 FGINMMSTSPLDSIHTITDNYARNQR--QKKYQEEAIPALRDISISEVNQMFF 124
>sp|P57054|PIGP_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Homo sapiens GN=PIGP PE=1 SV=3
Length = 158
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 44 VYGFVGSITTVVATGIFLVWAYVPERCLNAIGIYYYPSRYWALAVPAYAMVTLVLALVFY 103
+YGFV +++ ++LVWA++PE LN++G+ Y+P +YWA+A+P Y ++ +V+ V
Sbjct: 38 IYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAIVIGYVLL 97
Query: 104 IGLNFMSTPSPTSLNKMFDEFTREASSYSPEGDDRPIEPISDISIDKINALMF 156
G+N MST S++ + D + + + + I + DISI ++N + F
Sbjct: 98 FGINMMSTSPLDSIHTITDNYAKNQQ--QKKYQEEAIPALRDISISEVNQMFF 148
>sp|Q9JHG1|PIGP_MOUSE Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Mus musculus GN=Pigp PE=2 SV=1
Length = 132
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 44 VYGFVGSITTVVATGIFLVWAYVPERCLNAIGIYYYPSRYWALAVPAYAMVTLVLALVFY 103
+YGFV +++ ++LVWA+VPE LN++G+ Y+P +YWA+A+P Y ++T+V+ V
Sbjct: 14 IYGFVLFLSSQFGFILYLVWAFVPESWLNSLGLTYWPQKYWAVALPVYLLITVVIGYVLL 73
Query: 104 IGLNFMSTPSPTSLNKMFDEFTREASSYSPEGDDRPIEPISDISIDKINALMF 156
G+N MST S++ + D + + + + D P + D+ I ++N + F
Sbjct: 74 FGINMMSTSPLDSIHTITDNYAKNQQRKNYQEDAIP--ALRDVPISEVNKMFF 124
>sp|O13904|MUG84_SCHPO Meiotically up-regulated gene 84 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug84 PE=1 SV=3
Length = 195
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 24 VSFLDQDDRTYSGFGPKTSEVYGFVGSITTVVATGIFLVWAYVPERCLNAIGIYYYPSRY 83
++ +DQ D P T E YGFV + +++ G+++VWA P L I+YY SR+
Sbjct: 65 IAEIDQQDWDIMVKVP-TYEYYGFVMYLVSMLGFGVYIVWALTPAPVLKFFEIHYYLSRW 123
Query: 84 WALAVPAYAMVTLVLALVFYIGLNFMSTPSPTSLNKMFDEFTREASSYSPEGDD 137
WALA+P + VL + ++ LN +T L K F Y+ G++
Sbjct: 124 WALAIPTWL---FVLVIYIHVVLNAYNT---EVLTKPFSSLECIVDQYALVGEE 171
>sp|Q4G3A7|RPOB_EMIHU DNA-directed RNA polymerase subunit beta OS=Emiliania huxleyi
GN=rpoB PE=3 SV=1
Length = 1093
Score = 32.7 bits (73), Expect = 0.90, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 5 HSVNSPRRILSFSKRRRATVS---FLDQDDRTYSGFGPKTSEVYGFVGSITTVVATGIFL 61
+++N PR L +KR+ AT S F+ G P+ +V F+G I + +G FL
Sbjct: 58 YTINPPRYTLEEAKRKDATYSVRIFIRAQLNYLEGADPQEKQV--FLGDIPLMTDSGTFL 115
Query: 62 VWA---YVPERCLNAIGIYY 78
V + + + + GIYY
Sbjct: 116 VNGIERIIINQIVRSPGIYY 135
>sp|A9N5B0|ARNT_SALPB Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl
transferase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=arnT PE=3 SV=1
Length = 548
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 35 SGFGPKTSEVYGFVGSITTVVATGIFLVWAYVPERCLNAIGIYYYPSRYWALAVPAYAMV 94
S +GP S V+ + + G+F VWA+V L Y+ +Y +PA+ +
Sbjct: 363 SSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSL------YHSQKY---LLPAFCPL 413
Query: 95 TLVLALVFYIGLNFMSTPSPTSLNKM 120
L L F I M + P +M
Sbjct: 414 GLALLFGFSIPDRVMESKQPQFFVEM 439
>sp|P06907|MYP0_RAT Myelin protein P0 OS=Rattus norvegicus GN=Mpz PE=1 SV=1
Length = 248
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 43 EVYGFVGSITTV---------VATGIFLVWAYVPERCLNAIGIYYY 79
EVYG VGS T+ V+ I W Y PE +AI I++Y
Sbjct: 37 EVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHY 82
>sp|P27573|MYP0_MOUSE Myelin protein P0 OS=Mus musculus GN=Mpz PE=1 SV=1
Length = 248
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 43 EVYGFVGSITTV---------VATGIFLVWAYVPERCLNAIGIYYY 79
E+YG VGS T+ V+ I W Y PE +AI I++Y
Sbjct: 37 EIYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHY 82
>sp|Q6WEB5|MYP0_HORSE Myelin protein P0 OS=Equus caballus GN=MPZ PE=2 SV=1
Length = 248
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 9/47 (19%)
Query: 42 SEVYGFVGSITTV---------VATGIFLVWAYVPERCLNAIGIYYY 79
EVYG VGS T+ V+ I W Y PE +AI I++Y
Sbjct: 36 KEVYGAVGSRVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHY 82
>sp|A9MJC5|ARNT_SALAR Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl
transferase OS=Salmonella arizonae (strain ATCC BAA-731
/ CDC346-86 / RSK2980) GN=arnT PE=3 SV=1
Length = 548
Score = 30.0 bits (66), Expect = 5.7, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
Query: 35 SGFGPKTSEVYGFVGSITTVVATGIFLVWAYVPERCLNAIGIYYYPSRYWALAVPAYAMV 94
S +GP TS V+ + + G+F VWA+V +Y +PA+ +
Sbjct: 363 SSWGPLTSPVWTHIETYKVFCVWGVFTVWAFVG---------WYSLCNSQKYMLPAFCPL 413
Query: 95 TLVLALVFYIGLNFMSTPSPTSLNKMFDEFTR 126
L L F + M + P + F + TR
Sbjct: 414 GLALLFGFSVPDRVMESKQP----QFFVDMTR 441
>sp|A4RHN5|CHO2_MAGO7 Phosphatidylethanolamine N-methyltransferase OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CHO2 PE=3
SV=1
Length = 963
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 67 PERCLNAIGIYYYPSRYWALAVPAYAMVTLVLALVFYIGLNFMSTPSPTSLNKMFDEFTR 126
PER + ++G+Y W+ A+ A+++ +L L F ++++ P + K++ + R
Sbjct: 550 PERVMGSLGLYGAALITWSRAIFVLALISHLLTLAF---ISYVEKP---HMQKIYGQSIR 603
Query: 127 EA---SSYSPEGDDRPIEPISDISIDKI 151
E + + P++ SD S+DK+
Sbjct: 604 EEAGLTKFVKRSLPPPVKEWSD-SVDKV 630
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,415,699
Number of Sequences: 539616
Number of extensions: 2223697
Number of successful extensions: 5125
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5115
Number of HSP's gapped (non-prelim): 20
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)