BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031394
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P92959|RK24_ARATH 50S ribosomal protein L24, chloroplastic OS=Arabidopsis thaliana
GN=RPL24 PE=2 SV=2
Length = 198
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/158 (73%), Positives = 138/158 (87%)
Query: 3 VKPTDKPCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFR 62
VKP + PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+G DKGKIGE+TK+F
Sbjct: 39 VKPAENPCLVLAKLKRWERKECKPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFT 98
Query: 63 HNSTVMVKDINLKTKHVKKREEEEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDD 122
HNST+++KD+NLKTKH+K REE E GQI+KIEAPIHSSNVMLYSKE +V SRVGHKVL+D
Sbjct: 99 HNSTIVIKDVNLKTKHMKSREEGEPGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLED 158
Query: 123 GTRVRYLIKTGEIIDSAENWKKLKEANRQEKTEVATAA 160
G +VRYLIKTGE+ID+ E WK LKEA +E T+VA +
Sbjct: 159 GQKVRYLIKTGELIDTIEKWKLLKEAKDKETTQVAVTS 196
>sp|P11893|RK24_PEA 50S ribosomal protein L24, chloroplastic OS=Pisum sativum GN=RPL24
PE=2 SV=1
Length = 194
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/158 (76%), Positives = 140/158 (88%)
Query: 1 MQVKPTDKPCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKV 60
+Q KPT+K CLIV++LKRWERKECKPNSLPVLHK+HVK GDTVKVI+G +KG+IGEITK+
Sbjct: 37 LQGKPTEKKCLIVMKLKRWERKECKPNSLPVLHKLHVKVGDTVKVISGHEKGQIGEITKI 96
Query: 61 FRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVL 120
F+HNS+V+VKDINLKTKHVK +E E GQI K+EAPIHSSNVMLYSKE +V SRVGHKVL
Sbjct: 97 FKHNSSVIVKDINLKTKHVKSNQEGEPGQINKVEAPIHSSNVMLYSKEKDVTSRVGHKVL 156
Query: 121 DDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKTEVAT 158
++G RVRYLIKTGEIIDS ENWKKLKEAN++ AT
Sbjct: 157 ENGKRVRYLIKTGEIIDSEENWKKLKEANKKTAEVAAT 194
>sp|Q02764|RK24_TOBAC 50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum
GN=RPL24 PE=1 SV=1
Length = 187
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 135/158 (85%), Gaps = 2/158 (1%)
Query: 3 VKPTDKPCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFR 62
VK T+ PCLI +LKRWERKECKPNSLPVLHKMHVK GDTVK+I+G DKGK+GEIT++ +
Sbjct: 30 VKSTEGPCLIQAKLKRWERKECKPNSLPVLHKMHVKLGDTVKIISGHDKGKVGEITEIIK 89
Query: 63 HNSTVMVKDINLKTKHVKKREEEEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDD 122
HNS V+VKD+NLKTKHVK R E+E GQI+KIEAPIHSSNVMLYSKE +VASRVGHK LD+
Sbjct: 90 HNSKVVVKDVNLKTKHVKSRSEDEPGQIVKIEAPIHSSNVMLYSKEQKVASRVGHKTLDN 149
Query: 123 GTRVRYLIKTGEIIDSAENWKKLKEANRQEKTEVATAA 160
G RVRYLIKTGEIIDSAENWK K +EKT A AA
Sbjct: 150 GKRVRYLIKTGEIIDSAENWK--KAVKEKEKTTEAVAA 185
>sp|P27683|RK24_SPIOL 50S ribosomal protein L24, chloroplastic OS=Spinacia oleracea
GN=RPL24 PE=1 SV=1
Length = 191
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 127/152 (83%), Gaps = 1/152 (0%)
Query: 9 PCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVM 68
PCLIV+R+KRWERK+CKPNSLP LHK HVK GDTVKVI+G +KGKIGEI+K+ +HNSTV+
Sbjct: 41 PCLIVMRIKRWERKDCKPNSLPKLHKRHVKVGDTVKVISGGEKGKIGEISKIHKHNSTVI 100
Query: 69 VKDINLKTKHVKKREEEEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRY 128
+KD+N KTKHVK +EE EQGQIIKIEA IHSSNVML KE EVA RVGHK+L+D +VRY
Sbjct: 101 IKDLNFKTKHVKSKEEGEQGQIIKIEAAIHSSNVMLILKEQEVADRVGHKILEDVRKVRY 160
Query: 129 LIKTGEIIDSAENWKKLKEANRQEKTEVATAA 160
LIKTGEI+D+ + WK+++ E T VA AA
Sbjct: 161 LIKTGEIVDTPDRWKEIQNKKESE-TAVAVAA 191
>sp|B1XJS8|RL24_SYNP2 50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplX PE=3 SV=1
Length = 116
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 88/111 (79%)
Query: 27 NSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEE 86
+S P HKMHVK GDTV+VI+G DKGK+GE+ K +S V+VKD+N++TKHVK ++E E
Sbjct: 6 SSTPTRHKMHVKTGDTVQVISGRDKGKVGEVIKTLPKSSKVVVKDVNIRTKHVKPQQEGE 65
Query: 87 QGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
GQI EAPIHSSNVM YS++ +VASR+G+++ +DG +VR L KTGE+ID
Sbjct: 66 SGQIQTFEAPIHSSNVMHYSEKEKVASRIGYQLTEDGRKVRVLKKTGEVID 116
>sp|Q8DMM1|RL24_THEEB 50S ribosomal protein L24 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplX PE=3 SV=1
Length = 117
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 82/113 (72%)
Query: 25 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREE 84
K N PV ++MHVK GDTV+VIAG DK K+GE+ VF S V+VK +NLKTKH+K R+E
Sbjct: 5 KANKKPVRYRMHVKKGDTVQVIAGSDKAKVGEVLAVFPKTSQVIVKGVNLKTKHLKPRQE 64
Query: 85 EEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
E GQII EAPIHS VMLYS + VASR+ + +DG +VR L KTGEIID
Sbjct: 65 GESGQIITKEAPIHSCKVMLYSTKQNVASRICYTYTEDGRKVRMLKKTGEIID 117
>sp|B0JHZ2|RL24_MICAN 50S ribosomal protein L24 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplX PE=3 SV=1
Length = 117
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 82/108 (75%)
Query: 30 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQ 89
P KMHVK GD V+VIAG DKGK+GEI + STV+VK +N++TKH K ++E E GQ
Sbjct: 10 PQRQKMHVKKGDVVQVIAGSDKGKVGEILRALPQESTVVVKGVNIRTKHTKPQQEGESGQ 69
Query: 90 IIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
I+ EAPIHSS VMLYS++ ++ASRVG+ + +DG +VR L KTGEIID
Sbjct: 70 IVTYEAPIHSSKVMLYSEKKKIASRVGYTLTEDGRKVRILKKTGEIID 117
>sp|Q110B8|RL24_TRIEI 50S ribosomal protein L24 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplX PE=3 SV=1
Length = 122
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 84/108 (77%)
Query: 30 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQ 89
P+ +K+HVK GDTV++IAG DKGK+GE+ KV S V+VKD+N+ TKHVK ++E E G+
Sbjct: 15 PIRYKVHVKKGDTVQIIAGKDKGKVGEVLKVLPKVSKVIVKDVNIITKHVKPQQEGESGK 74
Query: 90 IIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
I+ EAPIHSSNVMLYS + +VASR+ + DDG +VR L KTGE+ID
Sbjct: 75 IVTTEAPIHSSNVMLYSTKQKVASRICYTFTDDGRKVRMLKKTGEVID 122
>sp|B1WQS1|RL24_CYAA5 50S ribosomal protein L24 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplX PE=3 SV=1
Length = 115
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 82/109 (75%)
Query: 30 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQ 89
P +KMHVK GDT++VI+G DKGK+GE+ K S V+VK +N+KTKHVK ++E E GQ
Sbjct: 7 PQRYKMHVKTGDTIQVISGRDKGKVGEVLKTIPTTSEVVVKGVNVKTKHVKPQQEGESGQ 66
Query: 90 IIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 138
I EAPIHSSNVMLYS + +VASR+ + ++G +VR L KTGEIIDS
Sbjct: 67 IATFEAPIHSSNVMLYSTKEQVASRISYTFTEEGRKVRMLKKTGEIIDS 115
>sp|O24700|RL24_SYNP6 50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplX PE=3 SV=1
Length = 113
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 80/108 (74%)
Query: 30 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQ 89
PV H +HVK GDTV+VIAG DKG +GE+ +VF S V+VK +NL+TKHVK R+E E GQ
Sbjct: 6 PVRHSVHVKKGDTVQVIAGKDKGTVGEVLQVFPKTSRVLVKGVNLRTKHVKPRQEGESGQ 65
Query: 90 IIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
I+ EA IHSSNV LYS +VASRV + +DG +VR L KTGEIID
Sbjct: 66 IVVEEASIHSSNVQLYSTTQKVASRVAYTFTEDGRKVRKLKKTGEIID 113
>sp|Q31L18|RL24_SYNE7 50S ribosomal protein L24 OS=Synechococcus elongatus (strain PCC
7942) GN=rplX PE=3 SV=1
Length = 113
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 80/108 (74%)
Query: 30 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQ 89
PV H +HVK GDTV+VIAG DKG +GE+ +VF S V+VK +NL+TKHVK R+E E GQ
Sbjct: 6 PVRHSVHVKKGDTVQVIAGKDKGTVGEVLQVFPKTSRVLVKGVNLRTKHVKPRQEGESGQ 65
Query: 90 IIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
I+ EA IHSSNV LYS +VASRV + +DG +VR L KTGEIID
Sbjct: 66 IVVEEASIHSSNVQLYSTTQKVASRVAYTFTEDGRKVRKLKKTGEIID 113
>sp|Q3MFB0|RL24_ANAVT 50S ribosomal protein L24 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplX PE=3 SV=1
Length = 117
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 84/115 (73%)
Query: 24 CKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKRE 83
K ++ P HK+HVK GDTV+VIAG DKGK+GE+ K S V+VK +N+KTKHVK ++
Sbjct: 3 SKKDTTPKFHKLHVKTGDTVQVIAGKDKGKVGEVIKALPQLSKVIVKGVNIKTKHVKPQQ 62
Query: 84 EEEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 138
E E G+I+ EAPIHSSNVMLYS + VASRV + +G +VR L KTGEI+D+
Sbjct: 63 EGESGRIVTQEAPIHSSNVMLYSTKQNVASRVCYTFTAEGKKVRKLKKTGEILDN 117
>sp|B2ITP4|RL24_NOSP7 50S ribosomal protein L24 OS=Nostoc punctiforme (strain ATCC 29133
/ PCC 73102) GN=rplX PE=3 SV=1
Length = 117
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 79/107 (73%)
Query: 31 VLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQI 90
V HKMHVK GDTV+VIAG DKGKIGEI + S V+VK +N+KTKHVK ++E E G+I
Sbjct: 10 VFHKMHVKTGDTVQVIAGKDKGKIGEIVQALPQLSKVIVKGVNIKTKHVKPQQEGESGRI 69
Query: 91 IKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
+ E PIHSSNVMLYS + VASRV + +G +VR L KTGEI+D
Sbjct: 70 VTQEFPIHSSNVMLYSTKQNVASRVCYTFTSEGKKVRKLKKTGEILD 116
>sp|P73309|RL24_SYNY3 50S ribosomal protein L24 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplX PE=3 SV=1
Length = 115
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 2/110 (1%)
Query: 30 PVLH--KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQ 87
P H KMHVK GDT++VI+G DKGK+GE+ + +S V+VK +N++TKHVK R+E E
Sbjct: 6 PAPHRVKMHVKKGDTIQVISGKDKGKVGEVLRTIPSHSQVVVKGVNIRTKHVKPRQEGES 65
Query: 88 GQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
GQI EAPIHSS VMLYS + ++ASR+ + V DDG +VR L KTGEIID
Sbjct: 66 GQISSYEAPIHSSKVMLYSTKEKIASRICYTVTDDGRKVRMLKKTGEIID 115
>sp|B0C1E4|RL24_ACAM1 50S ribosomal protein L24 OS=Acaryochloris marina (strain MBIC
11017) GN=rplX PE=3 SV=1
Length = 115
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%)
Query: 33 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIK 92
+KMHVK GDTV+VIAG DK K+GE+ V S V+V+ +N+KTKHVK R E E GQI
Sbjct: 11 YKMHVKKGDTVQVIAGKDKAKVGEVIDVLPKLSQVVVEGVNMKTKHVKPRSESESGQIST 70
Query: 93 IEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
+E PIHSSNVMLYS + VASRV + D G +VR L KTGEIID
Sbjct: 71 VEFPIHSSNVMLYSNKENVASRVCYTFDDSGRKVRMLKKTGEIID 115
>sp|Q2JQN1|RL24_SYNJA 50S ribosomal protein L24 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplX PE=3 SV=1
Length = 132
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
Query: 27 NSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEE 86
NSL +KM +K GDTV+VI+G DKGKIGE+ +VF + V+V+ +N+ T H K + E E
Sbjct: 24 NSL--RYKMRIKKGDTVQVISGDDKGKIGEVLQVFPERNMVLVEGVNIVTYHRKPQREGE 81
Query: 87 QGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
G+I EAPIH+ VMLYSK+ EVASR+G+++ DG +VR L KTGEI+D
Sbjct: 82 SGRIETKEAPIHACKVMLYSKKQEVASRIGYQITADGRKVRVLKKTGEILD 132
>sp|A6MW12|RK24_RHDSA 50S ribosomal protein L24, chloroplastic OS=Rhodomonas salina
GN=rpl24 PE=3 SV=1
Length = 102
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 75/95 (78%)
Query: 35 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 94
MHVK GDTVK++ G DKGKIGEITK+ + ++ V+V+DIN+K KHVK R+E E G+I++ E
Sbjct: 1 MHVKQGDTVKILTGKDKGKIGEITKIIKGSNQVVVQDINVKKKHVKPRKEGEIGKILQFE 60
Query: 95 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYL 129
APIHSSNVM+Y+ E +VASRV ++ + G ++R
Sbjct: 61 APIHSSNVMVYNAESQVASRVNYQKDESGKKIRVF 95
>sp|Q7NEG3|RL24_GLOVI 50S ribosomal protein L24 OS=Gloeobacter violaceus (strain PCC
7421) GN=rplX PE=3 SV=1
Length = 116
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 33 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIK 92
HK HVK GDTV+VI+G DKGK+G++++V V+V+ +N++TKHVK + ++QGQ ++
Sbjct: 12 HKFHVKKGDTVQVISGKDKGKVGKVSEVLPTAGKVIVEGVNMQTKHVKP-QGDQQGQTLR 70
Query: 93 IEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EAPI+S VMLYS + + ASRVGH V D G +VR L KTGEI+D
Sbjct: 71 REAPIYSCKVMLYSDKKKQASRVGHTVTDAGKKVRVLKKTGEILD 115
>sp|Q8YPJ0|RL24_NOSS1 50S ribosomal protein L24 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplX PE=3 SV=2
Length = 149
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 34/148 (22%)
Query: 25 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTK------- 77
K ++ P HK+HVK GDTV++IAG DKGK+GE+ K S V+VK +N+KTK
Sbjct: 2 KKDTTPKFHKLHVKTGDTVQIIAGKDKGKVGEVIKALPQLSKVVVKGVNIKTKQIIAGKD 61
Query: 78 ---------------------------HVKKREEEEQGQIIKIEAPIHSSNVMLYSKEME 110
HVK ++E E G+I+ EAPIHSSNVMLYS +
Sbjct: 62 KGKVGEVIKALPQLSKVVVKGVNIKTKHVKPQQEGESGRIVTQEAPIHSSNVMLYSTKQN 121
Query: 111 VASRVGHKVLDDGTRVRYLIKTGEIIDS 138
VASRV + +G +VR L KTGEI+D+
Sbjct: 122 VASRVCYTFTAEGKKVRKLKKTGEILDN 149
>sp|Q2JIL6|RL24_SYNJB 50S ribosomal protein L24 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplX PE=3 SV=1
Length = 132
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 27 NSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEE 86
NSL +KM +K GDTV+VI+G DKGKIGE+ +VF + V+V+ +N+ T H K + E E
Sbjct: 24 NSL--RYKMRIKQGDTVQVISGDDKGKIGEVLRVFPERNMVLVEGVNIVTYHRKPQREGE 81
Query: 87 QGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
G+I EAPI VM YSK+ EVASR+G+++ DG +VR L KTGEI+D
Sbjct: 82 SGRIETKEAPIPVCKVMAYSKKQEVASRIGYQITADGRKVRVLKKTGEILD 132
>sp|A5GIT4|RL24_SYNPW 50S ribosomal protein L24 OS=Synechococcus sp. (strain WH7803)
GN=rplX PE=3 SV=1
Length = 118
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (71%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM ++ GDTV+VIAG DKGK GE+ + + + V+V+ +N++T+HVK +E E G+I+
Sbjct: 15 KMRLRKGDTVQVIAGKDKGKTGEVLRTLPNENRVIVEGVNMRTRHVKPTQEGESGRIVTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVMLYS +VASRV DG++ R L KTGE+ID
Sbjct: 75 EASLHASNVMLYSTAKKVASRVELITEKDGSKKRRLKKTGEVID 118
>sp|A5GVX1|RL24_SYNR3 50S ribosomal protein L24 OS=Synechococcus sp. (strain RCC307)
GN=rplX PE=3 SV=1
Length = 113
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 75/108 (69%)
Query: 30 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQ 89
P KM ++ GDTV+VIAG DKGK GE+ + + V+V+ +NL+T+HVK +E E G+
Sbjct: 6 PTRTKMRIRKGDTVQVIAGKDKGKTGEVLRTLPWENRVVVQGVNLRTRHVKPAQEGESGR 65
Query: 90 IIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
I+ EA +H+SNVM+YS + +VASRV V DG + R L KTGE++D
Sbjct: 66 IVTEEASLHASNVMVYSTDKKVASRVEIVVDKDGNKKRKLKKTGELLD 113
>sp|Q1XDI5|RK24_PORYE 50S ribosomal protein L24, chloroplastic OS=Porphyra yezoensis
GN=rpl24 PE=3 SV=1
Length = 116
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 72/103 (69%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
K+ +K GD V+VI+G DK K GEI + + V+VK INLK KH K ++E E G+IIK
Sbjct: 13 KIKLKKGDLVQVISGSDKTKTGEIIAIIYKTNKVIVKGINLKVKHKKPQQEGETGEIIKF 72
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 136
EAPIH+SNVML+S++ +ASR + D G ++R L KTGE+I
Sbjct: 73 EAPIHTSNVMLFSEQNNIASRSSVIINDKGQKIRKLKKTGELI 115
>sp|Q7V9X3|RL24_PROMA 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplX PE=3 SV=1
Length = 118
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
Query: 19 WERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKH 78
+ + K SLP+ KM ++ GDTV+VI G +KGK GE+ K + V+V+ INL+T+H
Sbjct: 2 FNLNQTKKASLPI--KMRIRKGDTVQVINGKEKGKTGEVLKTLPIENRVIVQGINLRTRH 59
Query: 79 VKKREEEEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
VK +E E G+I+ EA +H+SNVM+YS + + ASRV + DG++ R L KTGE+ID
Sbjct: 60 VKPTQEGESGRIVTEEASLHASNVMVYSTKQKTASRVEVFIDKDGSKKRRLKKTGELID 118
>sp|Q3AW82|RL24_SYNS9 50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9902)
GN=rplX PE=3 SV=1
Length = 118
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Query: 24 CKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKRE 83
KP ++ + KM ++ GDTV+VIAG DKGK G + + + + V+V+ +N++T+H K +
Sbjct: 6 SKPKAVERI-KMRIRKGDTVQVIAGKDKGKTGAVLRTLPNENRVIVEGVNMRTRHEKPSQ 64
Query: 84 EEEQGQIIKIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
E E G+I+ EA +H+SNVMLYS + +VASRV V DGT+ R L KTGE++D
Sbjct: 65 EGESGRIVTEEASLHASNVMLYSTDKKVASRVEIVVEKDGTKKRKLKKTGEVLD 118
>sp|A2CC38|RL24_PROM3 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplX PE=3 SV=1
Length = 118
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM + GDTV+VI G DKGK GE+ + + V+V+ +N++T+HVK +E E G+I+
Sbjct: 15 KMRIHKGDTVQVITGKDKGKTGEVLRTLPIENRVIVQGVNIRTRHVKPTQEGESGRIVTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVMLYS ++ASRV V DG++ R L KTGE+ID
Sbjct: 75 EASVHASNVMLYSNNKKIASRVALVVEKDGSKKRRLKKTGELID 118
>sp|A2C4Y8|RL24_PROM1 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain
NATL1A) GN=rplX PE=3 SV=1
Length = 118
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM ++ GDTV+VI+G DKGK GE+ K + + V+V+ IN +TKHVK +E E G+I
Sbjct: 15 KMKIRKGDTVQVISGKDKGKTGEVLKTLPYENRVLVQGINQRTKHVKPSQEGETGRIETK 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
E P+H+SNVM+YS + +VAS+V V DG++ R L KTGE+ID
Sbjct: 75 EFPLHASNVMIYSTKEKVASKVEIFVDKDGSKKRRLKKTGELID 118
>sp|A0PXV7|RL24_CLONN 50S ribosomal protein L24 OS=Clostridium novyi (strain NT) GN=rplX
PE=3 SV=1
Length = 105
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 70/105 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ D V VI+G DKGK+ E+ V+ S V+VKD N+ TKHVK E QG I+
Sbjct: 1 MAKVHVRRTDKVVVISGKDKGKVSEVLAVYPKTSKVLVKDANVVTKHVKPNRENMQGGIV 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 136
K EAP++SS VMLY A+R+ K+L+DGT+VR K GEI+
Sbjct: 61 KKEAPMNSSKVMLYCTNCNSATRISKKLLEDGTKVRVCKKCGEIL 105
>sp|Q7U4I9|RL24_SYNPX 50S ribosomal protein L24 OS=Synechococcus sp. (strain WH8102)
GN=rplX PE=3 SV=1
Length = 118
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 74/104 (71%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM ++ GDTV+VIAG DKGK GE+ + + + ++V+ +N++T+H K +E E G+I+
Sbjct: 15 KMRIRKGDTVQVIAGKDKGKTGEVLRTLPNENRLIVEGVNMRTRHEKPTQEGETGRIVNE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVMLYS +VASRV V DG++ R L KTGE++D
Sbjct: 75 EASLHASNVMLYSTAKKVASRVEIVVEKDGSKKRKLKKTGEVLD 118
>sp|Q7V534|RL24_PROMM 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplX PE=3 SV=1
Length = 118
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 73/104 (70%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM + GDTV+VI G DKGK GE+ + + V+V+ +N++T+HVK +E E G+I+
Sbjct: 15 KMRIHKGDTVQVITGKDKGKTGEVLRTLPIENRVIVQGVNIRTRHVKPTQEGESGRIVTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVMLYS + ++ASRV V DG++ R L KTGE+ID
Sbjct: 75 EASVHASNVMLYSNKKKIASRVELVVEKDGSKKRRLKKTGELID 118
>sp|Q3AMP1|RL24_SYNSC 50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9605)
GN=rplX PE=3 SV=1
Length = 118
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 74/104 (71%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM ++ GDTV+VIAG DKGK G + + + + V+V+ +N++T+H K +E E G+I+
Sbjct: 15 KMRIRKGDTVQVIAGKDKGKTGAVLRTLPNENRVVVEGVNMRTRHEKPTQEGETGRIVTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVMLYS + +VASRV V DGT+ R L KTGE++D
Sbjct: 75 EASLHASNVMLYSTDKKVASRVEIVVEKDGTKKRRLKKTGEVLD 118
>sp|Q97EI9|RL24_CLOAB 50S ribosomal protein L24 OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=rplX PE=3 SV=1
Length = 106
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 71/102 (69%)
Query: 33 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIK 92
+K+HV+ D+V VI+G D+GKIGE+ V TV++KD+N+ KH K +E QG +IK
Sbjct: 3 NKIHVRKQDSVVVISGKDRGKIGEVLAVNPKKGTVLIKDVNVVVKHQKANKENMQGGLIK 62
Query: 93 IEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI+S+ VMLY + + A+R+ KVLDDGT+VR K GE
Sbjct: 63 KEAPINSAKVMLYCTKCKTATRISKKVLDDGTKVRVCKKCGE 104
>sp|B1KSL4|RL24_CLOBM 50S ribosomal protein L24 OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=rplX PE=3 SV=1
Length = 105
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 69/103 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II
Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGII 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 61 HKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|A7GJ63|RL24_CLOBL 50S ribosomal protein L24 OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=rplX PE=3 SV=1
Length = 105
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 69/103 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II
Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGII 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 61 HKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|B1IGE3|RL24_CLOBK 50S ribosomal protein L24 OS=Clostridium botulinum (strain Okra /
Type B1) GN=rplX PE=3 SV=1
Length = 105
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 69/103 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II
Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGII 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 61 HKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|C3KVP0|RL24_CLOB6 50S ribosomal protein L24 OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=rplX PE=3 SV=1
Length = 105
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 69/103 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II
Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGII 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 61 HKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRICKKCGE 103
>sp|Q0ID16|RL24_SYNS3 50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9311)
GN=rplX PE=3 SV=1
Length = 103
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 72/103 (69%)
Query: 35 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 94
M ++ GDTV+VIAG DKGK GE+ + + + V+V+ +N++T+HVK +E E G+I+ E
Sbjct: 1 MRLRKGDTVQVIAGKDKGKTGEVLRTLPNENRVIVEGLNMRTRHVKPTQEGETGRIVTEE 60
Query: 95 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
A +H+SNVM YS +VASR+ DG++ R L KTGE+ID
Sbjct: 61 ASLHASNVMFYSTAKKVASRIELITEKDGSKKRRLKKTGEVID 103
>sp|A2BTC6|RL24_PROMS 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain
AS9601) GN=rplX PE=3 SV=1
Length = 118
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 71/104 (68%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM +K GD VKVI G DKGK GE+ K + V+VK INL+TKHVK +E E G+I+
Sbjct: 15 KMRIKTGDLVKVINGKDKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVM +SK+ + S++ + + +G + R L KTGE+ID
Sbjct: 75 EASLHASNVMFFSKDKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
>sp|A8G750|RL24_PROM2 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplX PE=3 SV=1
Length = 118
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 71/104 (68%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM +K GD VKVI G +KGK GE+ K + V+VK INL+TKHVK +E E G+I+
Sbjct: 15 KMRIKTGDLVKVINGKEKGKTGEVLKTIPLENKVVVKGINLRTKHVKPTQEGETGRILTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVM +SKE + S++ + + +G + R L KTGE+ID
Sbjct: 75 EASLHASNVMFFSKEKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
>sp|A3PF36|RL24_PROM0 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplX PE=3 SV=1
Length = 118
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 71/104 (68%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM +K GD VKVI G +KGK GE+ K + V+VK INL+TKHVK +E E G+I+
Sbjct: 15 KMRIKTGDLVKVINGKEKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVM +SKE + S++ + + +G + R L KTGE+ID
Sbjct: 75 EASLHASNVMFFSKEKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
>sp|Q318J5|RL24_PROM9 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplX PE=3 SV=1
Length = 118
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 70/104 (67%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM +K GD VKVI G DKGK GE+ K + V+VK INL+TKHVK +E E G+I+
Sbjct: 15 KMRIKTGDLVKVINGKDKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVM +SK+ + S++ + + G + R L KTGE+ID
Sbjct: 75 EASLHASNVMFFSKDKNLTSKIEYFIDKQGVKKRRLKKTGEVID 118
>sp|C1FMU0|RL24_CLOBJ 50S ribosomal protein L24 OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=rplX PE=3 SV=1
Length = 105
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ DTV VI+G DK KIGE+ V V+VKD+N+ TKH K E QG II
Sbjct: 1 MSKIHVRKKDTVVVISGKDKSKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGII 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 61 HKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|A5I7J5|RL24_CLOBH 50S ribosomal protein L24 OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=rplX PE=3 SV=1
Length = 105
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ DTV VI+G DK KIGE+ V V+VKD+N+ TKH K E QG II
Sbjct: 1 MSKIHVRKKDTVVVISGKDKSKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGII 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 61 HKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|A7FZ58|RL24_CLOB1 50S ribosomal protein L24 OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=rplX PE=3 SV=1
Length = 105
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%)
Query: 32 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQII 91
+ K+HV+ DTV VI+G DK KIGE+ V V+VKD+N+ TKH K E QG II
Sbjct: 1 MSKIHVRKKDTVVVISGKDKSKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGII 60
Query: 92 KIEAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 134
EAPI SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 61 HKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|Q46IS0|RL24_PROMT 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain
NATL2A) GN=rplX PE=3 SV=1
Length = 118
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 73/104 (70%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM ++ GDTV+VI+G DKGK GE+ K + + V+V+ IN +TKHVK +E E G+I
Sbjct: 15 KMKIRKGDTVQVISGKDKGKTGEVLKTLPYENRVLVQGINQRTKHVKPSQEGETGRIETK 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
E +H+SNVM+YS + +VAS+V V DG++ R L KTGE+ID
Sbjct: 75 EFSLHASNVMIYSTKEKVASKVEIFVDKDGSKKRRLKKTGELID 118
>sp|O46905|RK24_GUITH 50S ribosomal protein L24, chloroplastic OS=Guillardia theta
GN=rpl24 PE=3 SV=1
Length = 101
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 68/95 (71%)
Query: 35 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 94
M +K GD V+VIAG KG+I E+ KV R ++++++K+IN+K KHVK ++E E GQI + E
Sbjct: 1 MTIKQGDKVQVIAGSYKGEITEVLKVIRKSNSLILKNINIKNKHVKPKKEGEVGQIKQFE 60
Query: 95 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYL 129
APIH SNVMLY +E ++ SR + DG +VR L
Sbjct: 61 APIHRSNVMLYDEESQIRSRSKFIISQDGKKVRVL 95
>sp|B1X4Z7|RK24_PAUCH 50S ribosomal protein L24, organellar chromatophore OS=Paulinella
chromatophora GN=rpl24 PE=3 SV=1
Length = 118
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM ++ GD ++VI+G DKGKIGE+ + + + ++V+ +NL+T+HVK E G+I+
Sbjct: 15 KMRIRKGDIIQVISGKDKGKIGEVLRTLPNENRLIVEGVNLRTRHVKPTSGGESGRIVTK 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 136
EA +H+SNVM YS E +VASR+ V DG R R L KTGEI+
Sbjct: 75 EAYLHASNVMAYSTENKVASRIEIMVDSDGNRKRRLKKTGEIL 117
>sp|B7GJ78|RL24_ANOFW 50S ribosomal protein L24 OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=rplX PE=3 SV=1
Length = 103
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 35 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 94
MHVK GD V+VI+G DKGK G I F + V+V+ +N+ KHVK + QG II E
Sbjct: 1 MHVKKGDKVQVISGKDKGKQGVILAAFPKKNRVLVEGVNIVKKHVKPSQANPQGGIINQE 60
Query: 95 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
APIH SNVM + + +RVG+KV+ DG +VRY ++GEI+D
Sbjct: 61 APIHVSNVMPLDPKTGLPTRVGYKVV-DGKKVRYAKRSGEILD 102
>sp|A2BYS5|RL24_PROM5 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplX PE=3 SV=1
Length = 118
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 70/104 (67%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM +K GD VKVI G +KGK GE+ K + V+VK INL+TKHVK +E E G+I+
Sbjct: 15 KMRIKTGDLVKVINGKEKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGESGRILTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVM +SK+ + S++ + +G + R L KTGE+ID
Sbjct: 75 EASLHASNVMFFSKDKNIVSKIEFFIDKEGVKKRKLKKTGELID 118
>sp|Q7UZV5|RL24_PROMP 50S ribosomal protein L24 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rplX PE=3 SV=1
Length = 118
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 71/104 (68%)
Query: 34 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKI 93
KM +K GD VKVI G +KGK GE+ K + V+VK +NL+TKHVK +E E G+I+
Sbjct: 15 KMRIKTGDLVKVINGKEKGKTGEVLKTIPLENRVVVKGVNLRTKHVKPSQEGESGRILTE 74
Query: 94 EAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 137
EA +H+SNVM +SK+ + S++ + + +G + R L KTGE+ID
Sbjct: 75 EASLHASNVMFFSKDKNLISKIEYFIDKEGVKKRRLKKTGELID 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,511,614
Number of Sequences: 539616
Number of extensions: 2188773
Number of successful extensions: 8958
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 7697
Number of HSP's gapped (non-prelim): 892
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)