BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031399
MAQQSSAKEVDPEDVSKVIVFLKEVGASSSIPDDCCTNDSYSNILGRHIKVHKIQRGRLI
CHLSNFFGGIHGGAIAAFSERMAIACARTVVAEDKEIFLGELGISYLSAAPHNAELIMEA
SVVRSGRNVTVVAVEFKFNDTGKLVCASHATFYNTPIAKL

High Scoring Gene Products

Symbol, full name Information P value
AT3G61200 protein from Arabidopsis thaliana 9.4e-27
AT1G04290 protein from Arabidopsis thaliana 1.8e-07

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031399
        (160 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2098831 - symbol:AT3G61200 species:3702 "Arabi...   301  9.4e-27   1
TAIR|locus:2018294 - symbol:AT1G04290 "AT1G04290" species...   119  1.8e-07   1
UNIPROTKB|F1NW39 - symbol:ACOT13 "Uncharacterized protein...    89  0.00027   1


>TAIR|locus:2098831 [details] [associations]
            symbol:AT3G61200 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016788 "hydrolase activity,
            acting on ester bonds" evidence=ISS] [GO:0047617 "acyl-CoA
            hydrolase activity" evidence=ISS] [GO:0005777 "peroxisome"
            evidence=IDA] Pfam:PF03061 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0005777 InterPro:IPR006683 EMBL:AL137898 EMBL:AY074852
            EMBL:AY124822 IPI:IPI00535578 PIR:T47912 RefSeq:NP_191679.1
            UniGene:At.22490 ProteinModelPortal:Q9M2E4 SMR:Q9M2E4 PaxDb:Q9M2E4
            PRIDE:Q9M2E4 DNASU:825292 EnsemblPlants:AT3G61200.1 GeneID:825292
            KEGG:ath:AT3G61200 TAIR:At3g61200 eggNOG:NOG247430
            HOGENOM:HOG000006135 InParanoid:Q9M2E4 OMA:MSYLSSA PhylomeDB:Q9M2E4
            ProtClustDB:CLSN2915738 Genevestigator:Q9M2E4 Uniprot:Q9M2E4
        Length = 188

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 66/160 (41%), Positives = 99/160 (61%)

Query:     7 AKEVDPEDVSKVIVFLKEVGASSSIPDDCCTNDSYSNILGRHIKVHKIQRGRLICH---- 62
             +K +DP  V  V  F K +    S  +D  + DS+S +   + +   I RGR+ C     
Sbjct:    30 SKVIDPNYVLMVADFFKAISPDESC-NDFTSFDSFSVLFQNNTRALSIARGRVSCSVTVT 88

Query:    63 --LSNXXXXXXXXXXXXXSERMAIACARTVVAEDKEIFLGELGISYLSAAPHNAELIMEA 120
               +SN             +ER+A+AC +TVV+EDK +F+GEL +SYLS+AP ++EL++E 
Sbjct:    89 PGISNFFKGLHGGAVASIAERVAMACVKTVVSEDKHLFIGELSMSYLSSAPISSELLVEG 148

Query:   121 SVVRSGRNVTVVAVEFKFNDTGKLVCASHATFYNTPIAKL 160
             +VVR+GRN++VV VEFK  +T K+   S ATFY++PI+KL
Sbjct:   149 TVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYHSPISKL 188


>TAIR|locus:2018294 [details] [associations]
            symbol:AT1G04290 "AT1G04290" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0016788
            "hydrolase activity, acting on ester bonds" evidence=ISS]
            [GO:0047617 "acyl-CoA hydrolase activity" evidence=ISS] [GO:0005777
            "peroxisome" evidence=IDA] Pfam:PF03061 EMBL:CP002684 GO:GO:0005777
            InterPro:IPR003736 InterPro:IPR006683 TIGRFAMs:TIGR00369
            EMBL:AC000104 HOGENOM:HOG000170540 OMA:MSPAKLG EMBL:AY088612
            IPI:IPI00516389 PIR:D86174 RefSeq:NP_563705.1 UniGene:At.43653
            UniGene:At.64495 ProteinModelPortal:P93828 SMR:P93828 PRIDE:P93828
            EnsemblPlants:AT1G04290.1 GeneID:839552 KEGG:ath:AT1G04290
            TAIR:At1g04290 InParanoid:P93828 PhylomeDB:P93828
            ProtClustDB:CLSN2687669 Genevestigator:P93828 Uniprot:P93828
        Length = 155

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 34/118 (28%), Positives = 55/118 (46%)

Query:    49 IKVHKIQRGRLIC------HLSNXXXXXXXXXXXXXSERMAIACARTVVAEDKEIFLGEL 102
             +KV  I+ GR++C      HL N              + +  A   T  A    + + E+
Sbjct:    39 LKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSV-EI 97

Query:   103 GISYLSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHATFYNTPIAKL 160
              +SYL AA  + E+ +E+  +R G+ V VV+VE +   TGK++     T Y  P + L
Sbjct:    98 NVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155


>UNIPROTKB|F1NW39 [details] [associations]
            symbol:ACOT13 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0047617 "acyl-CoA hydrolase activity" evidence=IEA] [GO:0051289
            "protein homotetramerization" evidence=IEA] Pfam:PF03061
            GO:GO:0005739 InterPro:IPR003736 InterPro:IPR006683
            TIGRFAMs:TIGR00369 GO:GO:0051289 GO:GO:0047617
            GeneTree:ENSGT00390000013934 EMBL:AADN02008334 OMA:YTERALP
            IPI:IPI00594915 Ensembl:ENSGALT00000022178 Uniprot:F1NW39
        Length = 113

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query:   101 ELGISYLSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHATFY 153
             ++ I+Y SAA    E+++ A +++ GRN+   +V+     TGKL+     T Y
Sbjct:    59 DMNITYTSAAKIGEEVLITAQILKQGRNIAFASVDLTNKATGKLIAQGRHTKY 111


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.131   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      160       147   0.00091  103 3  11 22  0.44    31
                                                     30  0.50    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  557 (59 KB)
  Total size of DFA:  125 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.17u 0.11s 12.28t   Elapsed:  00:00:00
  Total cpu time:  12.17u 0.11s 12.28t   Elapsed:  00:00:00
  Start:  Sat May 11 00:30:53 2013   End:  Sat May 11 00:30:53 2013

Back to top