BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031399
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R833|ACO13_PONAB Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1
Length = 140
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 40 SYSNILGRHIKVHKIQRGRLICHL------SNFFGGIHGGAIAAFSER---MAIACARTV 90
++ +LG+ I + G++IC + +N G +HGG A + MA+ C
Sbjct: 20 NFERVLGK-ITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTE-- 76
Query: 91 VAEDKEIFLGELGISYLSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHA 150
++ I+Y+S A ++++ A V++ G+ + +V+ TGKL+
Sbjct: 77 --RGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRH 134
Query: 151 TFY 153
T +
Sbjct: 135 TKH 137
>sp|Q9CQR4|ACO13_MOUSE Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1
Length = 140
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 58 RLICHL------SNFFGGIHGGAIAAFSE---RMAIACAR---TVVAEDKEIFLGELGIS 105
+LIC + +N G +HGG A + MA+ C V+ D + I+
Sbjct: 37 KLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSVD-------MNIT 89
Query: 106 YLSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHAT 151
Y+S A E+++ A +++ G+ + +V+ TGKL+ T
Sbjct: 90 YMSPAKIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135
>sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1
Length = 140
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 40 SYSNILGRHIKVHKIQRGRLICHL------SNFFGGIHGGAIAAFSER---MAIACARTV 90
++ +LG+ I + G++IC + +N G +HGG A + MA+ C
Sbjct: 20 NFERVLGK-ITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTE-- 76
Query: 91 VAEDKEIFLGELGISYLSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHA 150
++ I+Y+S A ++++ A V++ G+ + +V+ TGKL+
Sbjct: 77 --RGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRH 134
Query: 151 TFY 153
T +
Sbjct: 135 TKH 137
>sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6 OS=Caenorhabditis elegans GN=F42H10.6
PE=1 SV=2
Length = 169
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 53 KIQRGRLICHLS------NFFGGIHGGAIAAFSERMAIACARTVVAEDKEIFLGELGISY 106
++ + +L+C + N G +HGG A ++ + A A V +DK + EL +SY
Sbjct: 48 EVTKSKLVCEMVVQHQHLNSKGTLHGGQTATLTD-VITARAVGVTVKDKGMASVELAVSY 106
Query: 107 LSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHATFYNTP 156
L L + A V++ GR + EF+ GK+ T P
Sbjct: 107 LLPVKVGDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHTLAFLP 156
>sp|P95914|Y2140_SULSO Putative esterase SSO2140 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO2140 PE=3 SV=1
Length = 140
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 49 IKVHKIQRGRLICHL------SNFFGGIHGGAIAAFSERMAIACARTVVAEDKEIFLGEL 102
+KV +++GR + + + G +HGG I + + A TV ++ EL
Sbjct: 24 VKVINLEKGRAVVEIPYKEEFTRRGGVLHGGIIMSAIDITGGLAALTVNDAMDQV-TQEL 82
Query: 103 GISYLSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHATFY 153
I++L + +E V+R G V VV +EFK D GKL + ++Y
Sbjct: 83 KINFLEPM-YKGPFTIEGKVLRKGSTVIVVEIEFKDAD-GKLGAKAIGSWY 131
>sp|Q976X8|Y061_SULTO Putative esterase STK_00610 OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_00610 PE=3
SV=1
Length = 138
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 101 ELGISYLSAAPHNAELIMEASVVRSGRNVTVVAVEFKFNDTGKLVCASHATFY 153
EL +++L + +E VVR GR +V +EF+ + GKL + T+Y
Sbjct: 76 ELKVNFLEPM-YKGPFTVEGKVVRKGRTAVIVQIEFR-DSEGKLGAIALGTWY 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,994,028
Number of Sequences: 539616
Number of extensions: 2105691
Number of successful extensions: 4961
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4957
Number of HSP's gapped (non-prelim): 8
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)