BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031403
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 123/152 (80%), Positives = 136/152 (89%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M Q+SLIY+FVARG V+LAEYTEF GNF S+A QCLQKLP+SNNKFTYNCD HTFNYL D
Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVV ES+GRQIPMAFLERVK++F +YGGGKA+TA AN LNKEFG KLKE MQY
Sbjct: 61 NGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
C DHPEEISKL+KVKAQV+EVKGVMMENIEKV
Sbjct: 121 CADHPEEISKLSKVKAQVTEVKGVMMENIEKV 152
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/152 (80%), Positives = 139/152 (91%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVVA +S+GRQIPMAFLERVK++F +YGGGKAATA AN LNKEFG KLKE MQY
Sbjct: 61 NGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
C+DHP+EISKLAKVKAQVSEVKGVMMENIEKV
Sbjct: 121 CMDHPDEISKLAKVKAQVSEVKGVMMENIEKV 152
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 139/152 (91%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
+G+TYCVVA +S+GRQIPM+FLERVK++F +YGGGKAATA AN LNKEFG KLKE MQY
Sbjct: 61 DGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
C+DHP+EISKLAKVKAQVSEVKGVMMENIEKV
Sbjct: 121 CMDHPDEISKLAKVKAQVSEVKGVMMENIEKV 152
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 136/152 (89%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M Q++LIY+FVARG V+L EYTEF GNF ++A QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 66 MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 125
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVVA ES GRQIPMAFLERVK++F +YGGGKA TA AN LN+EFG KLKE MQY
Sbjct: 126 NGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQY 185
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
CVDHP+EISKLAKVKAQV+EVKGVMMENIEKV
Sbjct: 186 CVDHPDEISKLAKVKAQVTEVKGVMMENIEKV 217
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/159 (69%), Positives = 133/159 (83%), Gaps = 3/159 (1%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SL Y+F+ARG V+L E+T+F GNF S+A Q L+ LP+SNNKFTYNCD HTFN LV+
Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVVA +S+GR+IPMAFLERVK++F +YGG KAAT AN LNKEFG LKE MQY
Sbjct: 61 NGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKV---GMLC 156
C+DHP+EIS LAK KAQVSEVK +MMENIEKV G++C
Sbjct: 121 CMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVIC 159
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 126/152 (82%), Gaps = 1/152 (0%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNN-KFTYNCDAHTFNYLV 59
M Q+S IY+FVARG ++LAEYTEF+GNF SIA QCLQKLP+S+N KFTYNCD HTFN+LV
Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLV 60
Query: 60 DNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQ 119
++GY YCVVA +S +QI +AFLERVK +F +YGGGKA+TA A LNKEFGP +KE M
Sbjct: 61 EDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMN 120
Query: 120 YCVDHPEEISKLAKVKAQVSEVKGVMMENIEK 151
Y VDH EEI KL KVKAQVSEVK +M+ENI+K
Sbjct: 121 YIVDHAEEIEKLIKVKAQVSEVKSIMLENIDK 152
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 126/171 (73%), Gaps = 19/171 (11%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
MSQK LIY+FVA+G VVLAE+T +SGNF++IA QCLQKLP +++K+TY+CD HTFN+LVD
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAAT-------------------A 101
NG+ + VVADES+GR +P FLERVK++F +Y +
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFS 120
Query: 102 PANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
A L++EFGP LKE MQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKV
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKV 171
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 95/149 (63%), Gaps = 3/149 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNK-FTYNCDAHTFNYLVDNGY 63
+++YA VARG VVL+E+T S N ++IA Q L+K+P N+ +Y+ D + F+ +G
Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVD 123
T +A+E++GR+IP AFLE + FV YG TA A +N+EF L + + Y +
Sbjct: 62 TVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSN 120
Query: 124 HPEEISKLAKVKAQVSEVKGVMMENIEKV 152
P ++ ++K ++++V+GVM+ENI+KV
Sbjct: 121 DPNA-DRINRIKGEMNQVRGVMIENIDKV 148
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 94/158 (59%), Gaps = 10/158 (6%)
Query: 6 LIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTY 65
+IY+ VARG+ VLAE+T +GNF +I + L +P ++ K +Y + + F+YLV + TY
Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTY 62
Query: 66 CVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHP 125
+ADE GR+IP FL+ VK+ F S Y G K TA A G+N +F L+ LM + +
Sbjct: 63 LCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNT 120
Query: 126 EEISKLAKVKAQVSEVKGVMMENI--------EKVGML 155
+ +++ A++ EVK +++ +I EK+ ML
Sbjct: 121 TRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEML 158
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 95/150 (63%), Gaps = 4/150 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNG 62
++I+A VARG VVL+E++ S N +SI+ Q L+KLP S++ +Y+ D + F+ +G
Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDG 61
Query: 63 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCV 122
T +ADE++GR IP AFL+ + FV YG +A A +N EF L + M++
Sbjct: 62 LTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYS 120
Query: 123 DHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
+ P +++++K ++S+V+ VM+ENI+KV
Sbjct: 121 NDPNA-DRMSRIKGEMSQVRNVMIENIDKV 149
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLP--ASNNKFTYNCDAHTFNYLVDNG 62
+++YA VARG VVLAE++ +GN ++ + L+KL S+ + ++ D + F+ L +G
Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDG 61
Query: 63 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCV 122
T+ +A+++ GR++P ++LE + F+ Y G A APA +N EF L + M++
Sbjct: 62 LTFLCMANDTFGRRVPFSYLEEIHMRFMKNY-GKVAHNAPAYAMNDEFSRVLHQQMEFFS 120
Query: 123 DHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
+P + L +V+ +VSE++ VM+ENIEK+
Sbjct: 121 SNP-SVDTLNRVRGEVSEIRSVMVENIEKI 149
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPAS-NNKFTYNCDAHTFNYLVDNGY 63
S++YA VARG VVLAE + S N ++IA Q L+K+P + ++ +Y+ D + F+ +G
Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVD 123
T +ADE +GR+IP +FLE + FV YG +A A +N EF L + ++Y +
Sbjct: 62 TVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSN 120
Query: 124 HPEEISKLAKVKAQVSEVKGVMMENIEKV 152
P ++++K ++++V+ VM+ENI+ +
Sbjct: 121 DPNA-DTISRIKGEMNQVRDVMIENIDNI 148
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R +FL VK F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PE--EISKLAKVKAQVSEVKGVMMENIEKVG 153
E + K+ + +AQV E+KG+M+ NI+ V
Sbjct: 118 SENKSLDKVMETQAQVDELKGIMVRNIDLVA 148
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRII 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L ++Y H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVG 153
E ++A+ +AQV E+KG+M+ NI+ V
Sbjct: 118 SESKGTDQVAETQAQVDELKGIMVRNIDLVA 148
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 2/149 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL VK F + Y G +A TA +N EF L +++ ++
Sbjct: 62 YLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 125 PEEISKLAKVKAQVSEVKGVMMENIEKVG 153
+ + ++ + +AQV E+KG+M+ NI+ V
Sbjct: 121 -QSLDRVTETQAQVDELKGIMVRNIDLVA 148
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVG 153
E + K+ + +AQV E+KG+M+ NI+ V
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVA 148
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVG 153
E + K+ + +AQV E+KG+M+ NI+ V
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVA 148
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVG 153
E + K+ + +AQV E+KG+M+ NI+ V
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVA 148
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
MSQ ++YA V+ V L E+ +GNF +A + + K+P ++ K Y + H F+Y+ +
Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISE 59
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
N + + E G QIP FL ++ +F+ YG + +P + F L+E M+Y
Sbjct: 60 NDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYD-PFIRVLEERMKY 118
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEK 151
+P+ +K+ V QVSE KG + + IEK
Sbjct: 119 -YSNPKS-NKMNLVMDQVSEAKGALTDAIEK 147
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 36 LQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYG 94
L++L P S + + +TF+YL+DNG Y + ++S R++ ++LE + EF + +
Sbjct: 39 LKRLSPTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSF- 97
Query: 95 GGKAATAPANGLNKEFGPKLKELMQ---YCVDHPEEISKLAKVKAQVSEVKGVMMENIEK 151
G+ A P GL + MQ + P L K+ ++ +V VM +NIE
Sbjct: 98 -GEEALQP--GLRPYAFVQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIED 154
Query: 152 V 152
+
Sbjct: 155 L 155
>sp|Q4KM74|SC22B_RAT Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|Q5RAI9|SC22B_PONAB Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2
SV=3
Length = 215
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|O08547|SC22B_MOUSE Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1
SV=3
Length = 215
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|O08595|SC22B_CRIGR Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|Q5ZJW4|SC22B_CHICK Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2
SV=1
Length = 215
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A F+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+ EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 QSEFDEQH-GKKVPTVSRPYSFIEFDTYIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S N+ T + +F+Y+++ G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+ EF ++ G K T EF +++ + +D L+ + ++ +V+ +M
Sbjct: 92 QAEFHEQH-GKKVPTVSRPYSFIEFDTYIQKTKKSYIDSRAR-RNLSNINTELQDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 32 AYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFV 90
A Q +KL S + T A TF+YL++ G Y V+ + + +++ A+LE + EF
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFD 96
Query: 91 SKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIE 150
++ G K T EF +++ + +D L+ V ++ +V+ +M+ NIE
Sbjct: 97 EQH-GKKVPTVSRPYSFIEFDNYIQKTKKSYIDSRAR-RNLSSVNTELQDVQRIMVANIE 154
Query: 151 KV 152
+V
Sbjct: 155 EV 156
>sp|Q84WF5|VAMPL_ARATH Probable VAMP-like protein At1g33475 OS=Arabidopsis thaliana
GN=At1g33475 PE=2 SV=1
Length = 255
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 3 QKSLIYAFVARGNVVLAEYTEFSGNFN--SIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
Q ++ Y V+R N ++ Y + N S+A CL+K P + + TF +L+
Sbjct: 5 QNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFGFLMK 64
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEF 89
+ + Y + D+ + + FLE+++DE
Sbjct: 65 DDFVYFAIVDDVFKKSSVLDFLEKLRDEL 93
>sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1
SV=4
Length = 215
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G V+ + + + + A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCDLVLCEAAFPKTLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSCAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|Q7ZV15|S22BA_DANRE Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2
SV=1
Length = 215
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 28 FNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVK 86
+ S A Q +KL S + T F+Y+++ G Y + + +++ A+LE ++
Sbjct: 33 YQSQAKQLCRKLNEQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLE 92
Query: 87 DEFVSKYGGG-KAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF +YG + + P + + EF +++ ++ +D L + +++ +V+ +M
Sbjct: 93 GEFSEQYGAKVPSVSRPYSFI--EFDTYIQKTIKSYIDSRAR-RNLGNINSELHDVQRIM 149
Query: 146 MENIEKV 152
+ NIE+V
Sbjct: 150 VANIEEV 156
>sp|Q68WD8|DNAA_RICTY Chromosomal replication initiator protein DnaA OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVINFLASKIVSNVRELEGAL 336
>sp|A8GP75|DNAA_RICAH Chromosomal replication initiator protein DnaA OS=Rickettsia akari
(strain Hartford) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|Q59758|DNAA_RICPR Chromosomal replication initiator protein DnaA OS=Rickettsia
prowazekii (strain Madrid E) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVINFLASKIVSNVRELEGAL 336
>sp|Q4UMJ3|DNAA_RICFE Chromosomal replication initiator protein DnaA OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|A8F284|DNAA_RICM5 Chromosomal replication initiator protein DnaA OS=Rickettsia
massiliae (strain Mtu5) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|Q1RI85|DNAA_RICBR Chromosomal replication initiator protein DnaA OS=Rickettsia bellii
(strain RML369-C) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDDIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKVPKDVIDFLASKIVSNVRELEGAL 336
>sp|C3PP41|DNAA_RICAE Chromosomal replication initiator protein DnaA OS=Rickettsia
africae (strain ESF-5) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|A8GSY1|DNAA_RICRS Chromosomal replication initiator protein DnaA OS=Rickettsia
rickettsii (strain Sheila Smith) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|B0BYF7|DNAA_RICRO Chromosomal replication initiator protein DnaA OS=Rickettsia
rickettsii (strain Iowa) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|Q92H56|DNAA_RICCN Chromosomal replication initiator protein DnaA OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=dnaA PE=3
SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|C4K1R9|DNAA_RICPU Chromosomal replication initiator protein DnaA OS=Rickettsia
peacockii (strain Rustic) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|A8EY77|DNAA_RICCK Chromosomal replication initiator protein DnaA OS=Rickettsia
canadensis (strain McKiel) GN=dnaA PE=3 SV=1
Length = 463
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQIVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+ + +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKNVIDFLASKIVSNVRELEGAL 336
>sp|A8GVN1|DNAA_RICB8 Chromosomal replication initiator protein DnaA OS=Rickettsia bellii
(strain OSU 85-389) GN=dnaA PE=3 SV=1
Length = 463
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDDIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEE-ISKLA-KVKAQVSEVKGVM 145
++ Q V P++ I LA K+ + V E++G +
Sbjct: 302 LESKIEQMNVKVPKDAIDFLASKIVSNVRELEGAL 336
>sp|A5CYB7|GLYA_PELTS Serine hydroxymethyltransferase OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=glyA PE=3 SV=1
Length = 415
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 26/39 (66%)
Query: 103 ANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEV 141
+ GLN++ ++ E+M Y ++H ++ KL K +A+V E+
Sbjct: 370 SRGLNEDDMVQIAEIMDYAIEHRDDRGKLEKARAKVDEI 408
>sp|Q6CJA0|SEC22_KLULA Protein transport protein SEC22 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC22 PE=3 SV=1
Length = 214
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 40 PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGG 95
P S N+ T +Y+ N Y VVA+ + R + ++L ++ EF YGG
Sbjct: 43 PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGG 98
>sp|Q9CQW1|YKT6_MOUSE Synaptobrevin homolog YKT6 OS=Mus musculus GN=Ykt6 PE=2 SV=1
Length = 198
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 57 YLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSK-----YGGGKAATAPANGLNKEFG 111
Y+ + V+AD ++ LE+V DEF + + G AT GL+
Sbjct: 69 YVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQYTGLD---- 124
Query: 112 PKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
L +Y +P E ++KV+A++ E K ++ +E +
Sbjct: 125 ---DHLSKY--QNPREADPMSKVQAELDETKIILHNTMESL 160
>sp|Q3T000|YKT6_BOVIN Synaptobrevin homolog YKT6 OS=Bos taurus GN=YKT6 PE=2 SV=1
Length = 198
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 57 YLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSK-----YGGGKAATAPANGLNKEFG 111
Y+ ++ V+AD ++ LE+V DEF + + G T +GL+
Sbjct: 69 YVRNDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPTGSPDTIRYSGLD---- 124
Query: 112 PKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
+L +Y +P E + KV+A++ E K ++ +E +
Sbjct: 125 ---SQLSRY--QNPREADPMTKVQAELDETKIILHNTMESL 160
>sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22
PE=2 SV=1
Length = 218
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNK--EF 110
+ F+Y+++ Y + D S +++ +LE +K+EF G A K F
Sbjct: 60 YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTF 119
Query: 111 GPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 152
K K+L Q +AK+ ++ EV +M N+++V
Sbjct: 120 IQKTKKLYQ----DTRTQRNIAKLNDELYEVHQIMTRNVQEV 157
>sp|Q5PB48|DNAA_ANAMM Chromosomal replication initiator protein DnaA OS=Anaplasma
marginale (strain St. Maries) GN=dnaA PE=3 SV=1
Length = 471
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+D + AD S L+ V+D S+ G G A G
Sbjct: 257 HTFNALIDQNKQLVISADRSPSD------LDGVEDRIKSRLGWGLVADINETTFELRLGI 310
Query: 113 KLKELMQYCVDHPEEISK-LAK-VKAQVSEVKGVM 145
++ + V P E+ + LAK +K+ + E++G +
Sbjct: 311 LQLKIEKMGVHVPNEVLEFLAKNIKSNIRELEGAL 345
>sp|Q642F4|SC22A_RAT Vesicle-trafficking protein SEC22a OS=Rattus norvegicus GN=Sec22a
PE=2 SV=1
Length = 307
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 37 QKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG 96
+KL ++ T H N++ G +Y ++ E+ + +FL+ ++ EF++ Y
Sbjct: 42 RKLAQFPDRCTLKTGRHNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMM 101
Query: 97 KAATA 101
K TA
Sbjct: 102 KTNTA 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,015,002
Number of Sequences: 539616
Number of extensions: 2399844
Number of successful extensions: 7239
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 7182
Number of HSP's gapped (non-prelim): 72
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)