BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031405
         (160 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q556I2|AEDO_DICDI Probable 2-aminoethanethiol dioxygenase OS=Dictyostelium discoideum
           GN=ado-1 PE=3 SV=2
          Length = 218

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 1   MCIFCFPTSAVIPLHDHPGMTVFSKVLYGSMHVKAYDWVEPARFQETKGPG-YRPVRLAK 59
           + IF FP +  IP HDHP MTV SKVLYGS+   ++DW++     + +G   Y    +  
Sbjct: 71  LAIFAFPPNTCIPTHDHPQMTVLSKVLYGSISCDSFDWIDNTSNVKKQGKAIYTGTNILN 130

Query: 60  LATDKILTPQYGTSILYPKSGGNMHCFTAVTP-CAVLDILTPPYNEDAGRKCTYY 113
              +K+        I  P +  N+H F +    CAVLD+L PPY+ +  R CTYY
Sbjct: 131 SNDEKV-------KITLP-NENNIHRFQSGDEHCAVLDLLYPPYDSNFYRSCTYY 177


>sp|Q96SZ5|AEDO_HUMAN 2-aminoethanethiol dioxygenase OS=Homo sapiens GN=ADO PE=1 SV=2
          Length = 270

 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 75/173 (43%), Gaps = 17/173 (9%)

Query: 1   MCIFCFPTSAVIPLHDHPGMTVFSKVLYGSMHVKAYDWVEPARFQETKG--------PGY 52
           + +F   +   IPLHDHPGM    KVLYG++ +   D ++    Q  +         P  
Sbjct: 98  LGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLDAGGGQRPRALPPEQQFEPPL 157

Query: 53  RP-----VRLAKLATDKILTPQYGTSILYPKSGGNMHCFTAVT-PCAVLDILTPPYNEDA 106
           +P     VR   L +    T   G  IL P    N+H   AV  P A LDIL PPY+ D 
Sbjct: 158 QPREREAVRPGVLRSRAEYTEASGPCILTPHR-DNLHQIDAVEGPAAFLDILAPPYDPDD 216

Query: 107 GRKCTYY-VDYPFSTFSAVNGADNEKEEYAWLSEIDTPDDLHMRPGVYAGPAI 158
           GR C YY V  P     A + A +   E  WL E    DD       Y GP +
Sbjct: 217 GRDCHYYRVLEPVRPKEASSSACDLPRE-VWLLETPQADDFWCEGEPYPGPKV 268


>sp|Q6PDY2|AEDO_MOUSE 2-aminoethanethiol dioxygenase OS=Mus musculus GN=Ado PE=1 SV=2
          Length = 256

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 73/178 (41%), Gaps = 29/178 (16%)

Query: 1   MCIFCFPTSAVIPLHDHPGMTVFSKVLYGSMHVKAYDWVEPARFQETKGPGYR------- 53
           + +F   +   IPLHDHPGM    KVLYG++ +   D ++        G G+R       
Sbjct: 86  LGVFLLKSGTCIPLHDHPGMHGMLKVLYGTVRISCMDKLD-------TGAGHRRPPPEQQ 138

Query: 54  -----------PVRLAKLATDKILTPQYGTSILYPKSGGNMHCFTAVT-PCAVLDILTPP 101
                       VR   L +    T   G  +L P    N+H   AV  P A LDIL PP
Sbjct: 139 FEPPLQPLEREAVRPGVLRSRAEYTEASGPCVLTPHR-DNLHQIDAVDGPAAFLDILAPP 197

Query: 102 YNEDAGRKCTYY-VDYPFSTFSAVNGADNEKEEYAWLSEIDTPDDLHMRPGVYAGPAI 158
           Y+ + GR C YY V  P     A   A +   E  WL E    DD       Y GP +
Sbjct: 198 YDPEDGRDCHYYRVVEPIRPKEASGSACDLPRE-VWLLETPQADDFWCEGEPYPGPKV 254


>sp|Q55CT1|REDB_DICDI NADPH oxidoreductase B OS=Dictyostelium discoideum GN=redB PE=2
           SV=1
          Length = 667

 Score = 32.0 bits (71), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 91  PCAVLDILTPPYNEDAGRKCTYYVDYPFSTFSAVNGADNEKEEYAWLSEIDTPDDL 146
           PC V+D+ +  Y  +       +V +  +T    +  DN KE Y WL+  + P DL
Sbjct: 100 PCEVVDLES--YEHEQELHSESFVMFLVATHGEGDPTDNAKEFYLWLTNDERPTDL 153


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.138    0.448 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,977,862
Number of Sequences: 539616
Number of extensions: 2884581
Number of successful extensions: 4163
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4157
Number of HSP's gapped (non-prelim): 6
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)