BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031414
MHGSSGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQG
SISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKL
NWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD

High Scoring Gene Products

Symbol, full name Information P value
AT5G25360 protein from Arabidopsis thaliana 1.2e-44
AT1G15350 protein from Arabidopsis thaliana 1.2e-40
AT3G15770 protein from Arabidopsis thaliana 6.1e-39
AT4G32342 protein from Arabidopsis thaliana 1.6e-29
AT5G03440 protein from Arabidopsis thaliana 2.0e-17
AT3G54880 protein from Arabidopsis thaliana 2.5e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031414
        (160 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2145442 - symbol:AT5G25360 "AT5G25360" species...   470  1.2e-44   1
TAIR|locus:2037878 - symbol:AT1G15350 "AT1G15350" species...   432  1.2e-40   1
TAIR|locus:2093292 - symbol:AT3G15770 "AT3G15770" species...   416  6.1e-39   1
TAIR|locus:4515103481 - symbol:AT4G32342 "AT4G32342" spec...   327  1.6e-29   1
TAIR|locus:2142689 - symbol:AT5G03440 "AT5G03440" species...   213  2.0e-17   1
TAIR|locus:2082707 - symbol:AT3G54880 "AT3G54880" species...   212  2.5e-17   1


>TAIR|locus:2145442 [details] [associations]
            symbol:AT5G25360 "AT5G25360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR025124 Pfam:PF13259
            eggNOG:NOG303565 HOGENOM:HOG000242312 EMBL:BT005777 EMBL:BT006074
            EMBL:AK228420 IPI:IPI00541827 RefSeq:NP_001190393.1
            RefSeq:NP_197918.1 UniGene:At.30915 EnsemblPlants:AT5G25360.1
            EnsemblPlants:AT5G25360.2 GeneID:832608 KEGG:ath:AT5G25360
            TAIR:At5g25360 InParanoid:Q84JY4 OMA:TISWNAT PhylomeDB:Q84JY4
            ProtClustDB:CLSN2716599 ArrayExpress:Q84JY4 Genevestigator:Q84JY4
            Uniprot:Q84JY4
        Length = 169

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 90/156 (57%), Positives = 112/156 (71%)

Query:     6 GCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSL 65
             GC GC  +PP+  +    SK L + GR   K S+SEDFW+TSTC+MDNS +QSQ S+SS+
Sbjct:    20 GCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query:    66 G-TNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWNA 124
               TNN        S S S P+EFVNHG  LWNQTRQ+W+ N  ++ +  +VREP ++WNA
Sbjct:    80 SFTNN-----TSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKA-KVREPTISWNA 133

Query:   125 TYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 160
             TYESLLG NK F +PIPL EMVDFLVD+WEQEG+YD
Sbjct:   134 TYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169


>TAIR|locus:2037878 [details] [associations]
            symbol:AT1G15350 "AT1G15350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002684
            InterPro:IPR025124 Pfam:PF13259 HOGENOM:HOG000242312 EMBL:AY088679
            EMBL:AK227364 IPI:IPI00543813 RefSeq:NP_563972.1 RefSeq:NP_849667.1
            UniGene:At.43878 PRIDE:Q8L920 EnsemblPlants:AT1G15350.1
            EnsemblPlants:AT1G15350.2 GeneID:838104 KEGG:ath:AT1G15350
            TAIR:At1g15350 eggNOG:NOG246980 InParanoid:Q8L920 OMA:ARNSNAP
            PhylomeDB:Q8L920 ProtClustDB:CLSN2687812 Genevestigator:Q8L920
            Uniprot:Q8L920
        Length = 154

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 87/156 (55%), Positives = 107/156 (68%)

Query:     6 GCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSL 65
             GC+GC+ R   +T+AS          R   K S+SEDFW+TST DMDN    SQGS+SS 
Sbjct:     3 GCVGCY-REHRSTAASLKDPPSNSIARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLSS- 60

Query:    66 GTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNWN-A 124
               +N   D+   + +++AP E+VN G LLWNQTR+RW+G  K  N     +  KLNWN A
Sbjct:    61 --SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLNWNTA 118

Query:   125 TYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 160
             TY+SLLGSNK FPQPIPL+EMVDFLVDIWEQEG+YD
Sbjct:   119 TYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154


>TAIR|locus:2093292 [details] [associations]
            symbol:AT3G15770 "AT3G15770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR025124 Pfam:PF13259 EMBL:AK317137 IPI:IPI00537573
            RefSeq:NP_188198.3 UniGene:At.38995 PRIDE:B9DGF6
            EnsemblPlants:AT3G15770.1 GeneID:820820 KEGG:ath:AT3G15770
            TAIR:At3g15770 OMA:VASEDFW PhylomeDB:B9DGF6 Genevestigator:Q2V3V5
            Uniprot:B9DGF6
        Length = 162

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 86/164 (52%), Positives = 113/164 (68%)

Query:     3 GSSGCLGCFIRPPVNTSAS---NLSKELGVPG--RSAGKRSI--SEDFWTTSTCDMDNSA 55
             GSS CL CF +    TS     N +K++ V        K S+  SEDFWT +T DM+++A
Sbjct:     2 GSS-CLACFDKSKAKTSVDVPLNGTKDVLVEEDWSELRKPSVVASEDFWTNTTLDMESNA 60

Query:    56 VQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQV 115
                 GS+SS+ T NL  D+ G   S++ P+EFVNHG +LWNQTRQ+W+G+K++E+R    
Sbjct:    61 ---HGSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVG 117

Query:   116 REPKLNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMY 159
             REP LN N TYESLLGSNK FP+PIPL EMV FLV++WE+EG+Y
Sbjct:   118 REPILNENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 161


>TAIR|locus:4515103481 [details] [associations]
            symbol:AT4G32342 "AT4G32342" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161581
            InterPro:IPR025124 Pfam:PF13259 IPI:IPI00891025
            RefSeq:NP_001119095.1 UniGene:At.73468 EnsemblPlants:AT4G32342.1
            GeneID:6241086 KEGG:ath:AT4G32342 TAIR:At4g32342 eggNOG:NOG303565
            HOGENOM:HOG000242312 OMA:LINSINC PhylomeDB:B3H7L0
            Genevestigator:B3H7L0 Uniprot:B3H7L0
        Length = 161

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 75/160 (46%), Positives = 94/160 (58%)

Query:     4 SSGCLGCFIRPP-VNTSASNLSKELGVPGRSAGKRSIS-EDFWTTSTCDMD-NSAVQSQG 60
             S  C GC  R   +       SK L + G+   K S S +DFW+TSTCDMD N  +QSQ 
Sbjct:    14 SINCFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQS 73

Query:    61 SISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTH-QVREPK 119
             S          P       S S  +EFVNHG +LWN TRQ+W   ++   R    V EP 
Sbjct:    74 SNPPFD-----PQC-----STSNSTEFVNHGLILWNHTRQQW---RECLTRQQCLVPEPA 120

Query:   120 LNWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMY 159
             ++WN+TY+SLL +NK FPQPIPL EMV FLVD+WE+EG+Y
Sbjct:   121 ISWNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160


>TAIR|locus:2142689 [details] [associations]
            symbol:AT5G03440 "AT5G03440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR025124 Pfam:PF13259 HOGENOM:HOG000242312 EMBL:AY087179
            EMBL:BT025576 IPI:IPI00528843 RefSeq:NP_568118.1 RefSeq:NP_974726.1
            UniGene:At.33277 EnsemblPlants:AT5G03440.1
            EnsemblPlants:AT5G03440.2 GeneID:831839 KEGG:ath:AT5G03440
            TAIR:At5g03440 eggNOG:NOG292332 InParanoid:Q8LBJ0 OMA:NRTSEMP
            PhylomeDB:Q8LBJ0 ProtClustDB:CLSN2689431 Genevestigator:Q8LBJ0
            Uniprot:Q8LBJ0
        Length = 98

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 40/89 (44%), Positives = 59/89 (66%)

Query:    74 TNGGSGSASAPSE-FVNHGFLLWNQTRQRWIGNKKAENRTHQVR-EPKLNWNATYESLLG 131
             +N  +    +  E FVNH  + W + R++W+G+    NRT ++  EP + +NATYE LL 
Sbjct:    12 SNSSNDKEKSSEEIFVNHAEIAWQEMRKKWVGDPS--NRTSEMPDEPVIGFNATYEDLLT 69

Query:   132 SNKPFPQPIPLSEMVDFLVDIWEQEGMYD 160
             SN PF +PIPL+EMVDFL DIW  +G+++
Sbjct:    70 SNTPFNKPIPLAEMVDFLFDIWHGDGLFE 98


>TAIR|locus:2082707 [details] [associations]
            symbol:AT3G54880 "AT3G54880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655
            InterPro:IPR025124 Pfam:PF13259 HOGENOM:HOG000242312 EMBL:BT010630
            EMBL:AK176919 IPI:IPI00544567 PIR:T06732 RefSeq:NP_191048.1
            UniGene:At.21063 IntAct:Q9SV37 STRING:Q9SV37 DNASU:824653
            EnsemblPlants:AT3G54880.1 GeneID:824653 KEGG:ath:AT3G54880
            TAIR:At3g54880 eggNOG:NOG299794 InParanoid:Q9SV37 OMA:MELYTAN
            PhylomeDB:Q9SV37 ProtClustDB:CLSN2915748 ArrayExpress:Q9SV37
            Genevestigator:Q9SV37 Uniprot:Q9SV37
        Length = 112

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 38/98 (38%), Positives = 62/98 (63%)

Query:    64 SLGTNNLIPDTNGGSGSASAPS-EFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNW 122
             +L  + L+ D      + S  +   VNHG  +W + R++W+G++  + R +  ++  ++W
Sbjct:    16 TLELSKLVKDEKSSVKTNSENTLTLVNHGAKMWQENREKWVGDQSRQ-RKNTAKDQIISW 74

Query:   123 NATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 160
             + TYE LL +++PF + IPL EMVDFLVDIW  EG+YD
Sbjct:    75 STTYEDLLSTHEPFSESIPLPEMVDFLVDIWYDEGLYD 112


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.130   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      160       160   0.00097  106 3  11 23  0.44    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  173 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.71u 0.11s 17.82t   Elapsed:  00:00:00
  Total cpu time:  17.71u 0.11s 17.82t   Elapsed:  00:00:00
  Start:  Sat May 11 01:26:49 2013   End:  Sat May 11 01:26:49 2013

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