BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031418
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q52KD8|EAF6_XENLA Chromatin modification-related protein MEAF6 OS=Xenopus laevis
GN=meaf6 PE=2 SV=1
Length = 188
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAA 94
RK + +R+FS SSVTS AA
Sbjct: 79 NRKFKEAERLFSKSSVTSAAA 99
>sp|Q68ER9|EAF6_XENTR Chromatin modification-related protein MEAF6 OS=Xenopus
tropicalis GN=meaf6 PE=2 SV=1
Length = 191
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAA 94
RK + +R+FS SSVTS AA
Sbjct: 79 NRKFKEAERLFSKSSVTSAAA 99
>sp|Q2VPQ9|EAF6_MOUSE Chromatin modification-related protein MEAF6 OS=Mus musculus
GN=Meaf6 PE=2 SV=1
Length = 191
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAA 94
RK + +R+FS SSVTS AA
Sbjct: 79 NRKFKEAERLFSKSSVTSAAA 99
>sp|Q9HAF1|EAF6_HUMAN Chromatin modification-related protein MEAF6 OS=Homo sapiens
GN=MEAF6 PE=1 SV=1
Length = 191
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAA 94
RK + +R+FS SSVTS AA
Sbjct: 79 NRKFKEAERLFSKSSVTSAAA 99
>sp|Q58CU0|EAF6_BOVIN Chromatin modification-related protein MEAF6 OS=Bos taurus
GN=MEAF6 PE=2 SV=2
Length = 191
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAA 94
RK + +R+FS SSVTS AA
Sbjct: 79 NRKFKEAERLFSKSSVTSAAA 99
>sp|Q5ZIX3|EAF6_CHICK Chromatin modification-related protein MEAF6 OS=Gallus gallus
GN=MEAF6 PE=2 SV=1
Length = 182
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS--NFKR 73
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++ N +R
Sbjct: 21 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 80
Query: 74 PRKLQPEDRIFSLSSVTSPAA 94
RK + +R+FS SSVTS AA
Sbjct: 81 NRKFKEAERLFSKSSVTSAAA 101
>sp|Q6AZD3|EAF6_DANRE Chromatin modification-related protein MEAF6 OS=Danio rerio
GN=meaf6 PE=2 SV=1
Length = 192
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNF--KR 73
L+ LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN+++ +R
Sbjct: 19 LSELVKRKQELAETLVNLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKTDRR 78
Query: 74 PRKLQPEDRIFSLSSVTSPAA 94
RK + +R+FS SSVTS AA
Sbjct: 79 NRKFKEAERLFSKSSVTSVAA 99
>sp|O14240|EAF6_SCHPO Chromatin modification-related protein eaf6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=eaf6 PE=1 SV=1
Length = 138
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
L ++ KR + L +E+ +Y LE SYL+ GN +GFEG L + N SN +R
Sbjct: 25 LHEMIEKRQLLETSLIGLEDSIYRLEGSYLEKTSGTGNIIRGFEGLLKN--NASNLRRRA 82
Query: 76 KLQPEDRIFSLSSVTSPAAEELGVRRDDG 104
DR+FSLSS++SP DD
Sbjct: 83 DYSESDRLFSLSSLSSPHTRSPAYDLDDS 111
>sp|Q6C626|EAF6_YARLI Chromatin modification-related protein EAF6 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=EAF6 PE=3 SV=1
Length = 135
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 20 VSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQP 79
++K+ L ++E Q++ LE +YL++ GN KGF+ ++ ++ K+
Sbjct: 20 INKKKTHDKNLNSLEEQIFTLEGAYLEETSH-GNLVKGFDTYIKGAQS----KKRYVFNE 74
Query: 80 EDRIFSLSSVT-------SPAAEELGVRRDDGRFDYGAGRSKGGNLPSNGQGKP-KRGRM 131
+DR+FSLSS + A +L +++ + R KG + P +G KP KR R+
Sbjct: 75 DDRLFSLSSAVFLKHQAKTGAGGDLDETKNERKKTASQKRRKGDSTPMSGDEKPSKRSRV 134
>sp|Q6FJ46|EAF6_CANGA Chromatin modification-related protein EAF6 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=EAF6 PE=3 SV=1
Length = 91
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIG---QFGNAFKGFEGFLSSGKNTSNFK 72
L AL++ R +D+L ++ ++Y+ E+ Y G + N +GF+G + N SN
Sbjct: 12 LKALLADRKELEDKLDKLQQEIYDKESEYFDVDGGSKSYHNILRGFDGMSRTQSNNSN-- 69
Query: 73 RPRKLQPEDRIFSLSSVT 90
+ DRIFSLSS +
Sbjct: 70 ----MTNNDRIFSLSSAS 83
>sp|Q6BI21|EAF6_DEBHA Chromatin modification-related protein EAF6 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=EAF6 PE=3 SV=1
Length = 170
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
L + K+ +L +E+ +YE E Y + +GN KGF+ F + N KR
Sbjct: 25 LTQQILKKQELDSKLSKLEDSIYEKENEYFNE-SVYGNIVKGFQNFTKTNTGGLN-KRRI 82
Query: 76 KLQPEDRIFSLSSV 89
+D IFSLSSV
Sbjct: 83 TYTDDDHIFSLSSV 96
>sp|Q59QC2|EAF6_CANAL Chromatin modification-related protein EAF6 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=EAF6 PE=3 SV=1
Length = 211
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
L + K+ +L +E+ +Y+ E Y ++ GN KGFE F + KR
Sbjct: 71 LIQQILKKQELTRKLTTLEDSIYQKEIDYFEE-SPLGNIVKGFENFSKTSGGGGANKRKI 129
Query: 76 KLQPEDRIFSLSSV 89
+D IFSLSSV
Sbjct: 130 VYSEDDHIFSLSSV 143
>sp|Q75BT5|EAF6_ASHGO Chromatin modification-related protein EAF6 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=EAF6 PE=3 SV=1
Length = 98
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 18 ALVSKRSRFQDELRNIENQVYELETSYLQ--DIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
AL K+ + Q E I+ ++++ ET YL ++G KGF+GF GK+ S +
Sbjct: 18 ALHEKKVQEQ-EWDQIQQEIFDKETEYLSGNASSKYGTIVKGFDGF---GKHAS--QDSH 71
Query: 76 KLQPEDRIFSLSSVTSPAAEELGVR 100
Q +DRIFSLSS +E GV+
Sbjct: 72 HFQDQDRIFSLSSALFVKQQE-GVQ 95
>sp|Q6CPA6|EAF6_KLULA Chromatin modification-related protein EAF6 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=EAF6 PE=3 SV=1
Length = 115
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 18 ALVSKRSRFQDELRNIENQVYELETSYLQD--IGQFGNAFKGFEGF---------LSSGK 66
ALV K+ + + + ++E +VY+ ET YL + GN GF+GF LS
Sbjct: 18 ALVQKK-QLEAKWNSLEQEVYDKETEYLSQKPSSRMGNILLGFQGFNKSSSAQQILSDHS 76
Query: 67 NTSNFKRPRKLQPEDRIFSLSS 88
++SN + L DRIFSLSS
Sbjct: 77 HSSN---AQPLDDNDRIFSLSS 95
>sp|Q7SDW6|EAF6_NEUCR Chromatin modification-related protein eaf-6 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=eaf-6 PE=3 SV=1
Length = 179
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 34 ENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVT-SP 92
E +Y+ ET YL++ GN GF+ + N + +R L +R+FS SS++ +P
Sbjct: 38 EESIYQKETEYLENT-PAGNIITGFDNYTKGTANVAAQRRKTGLTDANRVFSRSSISYNP 96
Query: 93 AAEE 96
AA++
Sbjct: 97 AAQQ 100
>sp|A8ZYF3|HCP_DESOH Hydroxylamine reductase OS=Desulfococcus oleovorans (strain DSM
6200 / Hxd3) GN=hcp PE=3 SV=1
Length = 548
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 44 YLQDIGQFGNAF----KGFEGFLSSGKNTSNFKRPRKLQP--EDRIFSLSSVTSPAAEEL 97
Y IG +G ++ K FE F + T+N P K +DR+F+ V P A +
Sbjct: 276 YSHFIGNYGGSWWHQNKDFESFNGAILLTTNCLIPIKGDNTYKDRLFTTGVVNYPGAAHI 335
Query: 98 GVRRDDGRFDY 108
G R D G D+
Sbjct: 336 GDRPDGGAKDF 346
>sp|Q9VI55|UFL1_DROME E3 UFM1-protein ligase 1 homolog OS=Drosophila melanogaster
GN=CG1104 PE=1 SV=1
Length = 782
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 102 DDGRFDYGAGRSKGGNLPSNGQGKPKRGRMAPTSRDGKRNRTTSEPDFDDEDDPDMISR 160
D+G+ D R K + G G R +++ +R + ++ D DDEDD SR
Sbjct: 412 DEGKVDKRDERRKKASSGKAGGGAQGRETKTKSTKKHQRGKAAAQFDSDDEDDAQQGSR 470
>sp|Q6AWG9|Y5098_DROME Uncharacterized protein CG5098 OS=Drosophila melanogaster GN=CG5098
PE=1 SV=1
Length = 1238
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 133 PTSRDGKRNRTTSEPDFDDEDDP 155
P + G++ + T EPDF+D+D P
Sbjct: 809 PAKKPGRKKKVTKEPDFEDDDKP 831
>sp|Q8BKE9|IFT74_MOUSE Intraflagellar transport protein 74 homolog OS=Mus musculus
GN=Ift74 PE=1 SV=2
Length = 600
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFKRPR 75
L + K ++F +E+R ++ + E + Q + + + F+ + + T N + R
Sbjct: 326 LTDIKEKINQFSEEIRQLDMDLEEHQGEMNQKYKELKKREENMDAFIETFEETKNQELER 385
Query: 76 KLQPEDRIFSL-----------SSVTSPAAEELGVRRDDGRF---DYGAGRSKGGNLPSN 121
K Q E I +L ++S +EL + +DD F + ++ NL S+
Sbjct: 386 KAQIEASIITLLEHCSRNINRMKQISSITNQELKMMQDDLSFKSTEMQKSQTTARNLTSD 445
Query: 122 GQ 123
Q
Sbjct: 446 SQ 447
>sp|C4XLX6|RL2_DESMR 50S ribosomal protein L2 OS=Desulfovibrio magneticus (strain ATCC
700980 / DSM 13731 / RS-1) GN=rplB PE=3 SV=1
Length = 276
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 13 AATLAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSNFK 72
A T A LV+K ++ LR +V + ++ L IGQ GN +G+N K
Sbjct: 158 AGTYAQLVAKEGKYA-LLRLPSGEVRNVLSTCLATIGQVGNVMHENISIGKAGRNRWLGK 216
Query: 73 RPRKLQPEDRIFSLSSVTSP 92
R PE R +++ V P
Sbjct: 217 R-----PEVRGVAMNPVDHP 231
>sp|P47128|EAF6_YEAST Chromatin modification-related protein EAF6 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EAF6 PE=1
SV=1
Length = 113
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 20/93 (21%)
Query: 14 ATLAALVSKRSRFQDELRNIENQVYELETSYLQDIGQ----------------FGNAFKG 57
A L + R +D N++ ++Y+ ET Y GN KG
Sbjct: 13 AELKKSLQDRREQEDTFDNLQQEIYDKETEYFSHNSNNNHSGHGGAHGSKSHYSGNIIKG 72
Query: 58 FEGFLSSGKNTSNFKRPRKLQPEDRIFSLSSVT 90
F+ F S + ++ DRIFSLSS T
Sbjct: 73 FDTFSKSHHSHAD----SAFNNNDRIFSLSSAT 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,860,737
Number of Sequences: 539616
Number of extensions: 3037166
Number of successful extensions: 6770
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 6721
Number of HSP's gapped (non-prelim): 86
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)