BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031422
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3HVN1|AGUB_SOLTU N-carbamoylputrescine amidase OS=Solanum tuberosum GN=CPA PE=2 SV=1
Length = 300
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 133/152 (87%), Positives = 143/152 (94%)
Query: 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF 64
K R V V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E+FF
Sbjct: 4 KNRLVTVAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFF 63
Query: 65 QRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI 124
RAKPY HPTI++MQ LAKELGVV+PVSFFEEANNAHYNS+AIIDADG+DLGLYRKSHI
Sbjct: 64 HRAKPYLGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHI 123
Query: 125 PDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PDGPGYQEKFYFNPGDTGFKVFQTK+AKIGV
Sbjct: 124 PDGPGYQEKFYFNPGDTGFKVFQTKYAKIGVA 155
>sp|Q9XGI9|AGUB_SOLLC N-carbamoylputrescine amidase OS=Solanum lycopersicum GN=CPA PE=2
SV=1
Length = 300
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 132/152 (86%), Positives = 143/152 (94%)
Query: 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF 64
K R V V+ALQFACTDDVSTN+ATAERLVRAAH KGANIILIQELFEGYYFCQAQ+E+FF
Sbjct: 4 KNRLVTVAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFF 63
Query: 65 QRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI 124
RAKPY HPTI++MQ LAKELGVV+PVSFFEEANNAHYNS+AIIDADG+DLGLYRKSHI
Sbjct: 64 HRAKPYPGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHI 123
Query: 125 PDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PDGPGYQEK+YFNPGDTGFKVFQTK+AKIGV
Sbjct: 124 PDGPGYQEKYYFNPGDTGFKVFQTKYAKIGVA 155
>sp|Q8VYF5|AGUB_ARATH N-carbamoylputrescine amidase OS=Arabidopsis thaliana GN=CPA PE=1
SV=1
Length = 326
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/181 (74%), Positives = 148/181 (81%), Gaps = 27/181 (14%)
Query: 3 KGKRREVVVSALQFACTDDVSTNLATAER---------------------------LVRA 35
+G+RREVVVS+LQFAC+DD+STN+A AER LVR
Sbjct: 4 EGRRREVVVSSLQFACSDDISTNVAAAERFVSLSSSLPLSNYQSLPSSSSFKFPYALVRE 63
Query: 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF 95
AH KGANIILIQELFEGYYFCQAQREDFF+RAKPYK+HPTI +MQ+LAKELGVV+PVSFF
Sbjct: 64 AHAKGANIILIQELFEGYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVIPVSFF 123
Query: 96 EEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV 155
EEAN AHYNSIAIIDADG+DLG+YRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV
Sbjct: 124 EEANTAHYNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV 183
Query: 156 G 156
Sbjct: 184 A 184
>sp|Q93XI4|AGUB_ORYSJ N-carbamoylputrescine amidase OS=Oryza sativa subsp. japonica
GN=CPA PE=2 SV=1
Length = 301
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/153 (78%), Positives = 136/153 (88%)
Query: 4 GKRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDF 63
G +V V+A+QFACTD S N+ TAERL+R AH KGANI+L+QELFEG YFCQAQR DF
Sbjct: 6 GAGSKVSVAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDF 65
Query: 64 FQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSH 123
FQRAKPYK +PTI++ Q+LAKEL VV+PVSFFEEANNAHYNS+AIIDADG+DLGLYRKSH
Sbjct: 66 FQRAKPYKGNPTIIRFQKLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSH 125
Query: 124 IPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
IPDGPGYQEKFYFNPGDTGFK F+TK+A IGVG
Sbjct: 126 IPDGPGYQEKFYFNPGDTGFKAFKTKYATIGVG 158
>sp|Q9UBR1|BUP1_HUMAN Beta-ureidopropionase OS=Homo sapiens GN=UPB1 PE=1 SV=1
Length = 384
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Query: 32 LVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90
+V A G NII QE + + FC ++ + + A+ +D PT Q+LAK +V+
Sbjct: 103 IVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVV 162
Query: 91 PVSFFEEANNAH----YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVF 146
VS E ++ H +N+ +I G+ LG RK+HIP + E Y+ G+ G VF
Sbjct: 163 -VSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVF 221
Query: 147 QTKFAKIGV 155
QT+F +I V
Sbjct: 222 QTQFGRIAV 230
>sp|Q5RBM6|BUP1_PONAB Beta-ureidopropionase OS=Pongo abelii GN=UPB1 PE=2 SV=1
Length = 384
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 32 LVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90
+V A G NII QE + + FC ++ + + A+ +D PT Q+LAK +V+
Sbjct: 103 IVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVV 162
Query: 91 PVSFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQ 147
E E + +N+ +I G+ LG RK+HIP + E Y+ G+ G VFQ
Sbjct: 163 VSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQ 222
Query: 148 TKFAKIGV 155
T+F +I V
Sbjct: 223 TQFGRIAV 230
>sp|Q28IE5|NIT2_XENTR Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1
Length = 276
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
+S +QF + S NL A +L++ A KGA I+ + E F Y + +F
Sbjct: 6 LSLVQFLVSPVKSENLNRACKLIKEAAQKGAQIVALPECFNSPYGTK-----YFPEYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ ++ ++AKE G+ ++ S EE + YN+ A+ DG+ L +RK H+ D
Sbjct: 61 IPGESTERLSQVAKECGIYLIGGSIPEEDSGKLYNTCAVFGPDGTLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F VF+T + K+GVG
Sbjct: 121 PGKIRFQESETLSPGDS-FSVFETPYCKVGVG 151
>sp|Q6INI7|NIT2B_XENLA Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1
Length = 276
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
+S +QF + S NL A +L++ A KGA I+ + E F Y + F + A+
Sbjct: 6 LSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPYGTKY----FPEYAEKI 61
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
T L + ++AKE G+ ++ S EE + YN+ A+ DG+ L +RK H+ D
Sbjct: 62 PGESTEL-LSQVAKECGIYLIGGSIPEEDSGKFYNTCAVFGPDGTLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F VF T + K+GVG
Sbjct: 121 PGKIRFQESETLSPGDS-FSVFDTPYCKVGVG 151
>sp|Q6IR61|NIT2A_XENLA Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1
Length = 276
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
+S +QF + S NL A +L++ A KGA I+ + E F Y F + A+
Sbjct: 6 LSLVQFLVSPVKSDNLNRACKLIKEAAQKGAQIVALPECFNSPY----GTTYFPEYAEKI 61
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
T L + ++AKE G+ ++ S EE YN+ A+ DG+ L +RK H+ D
Sbjct: 62 PGESTEL-LSQVAKECGIYLIGGSIPEEDCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F VF T + K+GVG
Sbjct: 121 PGKIRFQESETLSPGDS-FSVFDTPYCKVGVG 151
>sp|Q8VC97|BUP1_MOUSE Beta-ureidopropionase OS=Mus musculus GN=Upb1 PE=2 SV=1
Length = 393
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 20 DDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILK 78
+ VS + E + A G NII QE + + FC ++ + + A+ +D T
Sbjct: 91 EQVSALHKSIEEIAEVAAMCGVNIICFQEAWNMPFAFCTREKLPWTEFAESAEDGLTTRF 150
Query: 79 MQELAKELGVVMPVSFFEEANNAH----YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKF 134
Q+LAK+ +V+ VS E + H +N+ +I G +G RK+HIP + E
Sbjct: 151 CQKLAKKHNMVV-VSPILERDREHGGVLWNTAVVISNSGLVMGKTRKNHIPRVGDFNEST 209
Query: 135 YFNPGDTGFKVFQTKFAKIGV 155
Y+ G+ G VFQT+F +I V
Sbjct: 210 YYMEGNLGHPVFQTQFGRIAV 230
>sp|Q03248|BUP1_RAT Beta-ureidopropionase OS=Rattus norvegicus GN=Upb1 PE=1 SV=1
Length = 393
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 30 ERLVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGV 88
E + A G NII QE + + FC ++ + + A+ +D T Q+LAK+ +
Sbjct: 101 EEIAEVAAMCGVNIICFQEAWNMPFAFCTREKLPWTEFAESAEDGLTTRFCQKLAKKHNM 160
Query: 89 VMPVSFFEEANNAH----YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFK 144
V+ +S E + H +N+ +I G +G RK+HIP + E Y+ G+ G
Sbjct: 161 VV-ISPILERDRDHGGVLWNTAVVISNSGLVMGKTRKNHIPRVGDFNESTYYMEGNLGHP 219
Query: 145 VFQTKFAKIGV 155
VFQT+F +I V
Sbjct: 220 VFQTQFGRIAV 230
>sp|Q9JHW2|NIT2_MOUSE Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV=1
Length = 276
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ +Q + S NL A LVR A +GANI+ + E F Y +F
Sbjct: 6 LALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPY-----GTTYFPDYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ K+ E+AKE + ++ S EE YN+ ++ DGS L +RK H+ D
Sbjct: 61 IPGESTQKLSEVAKESSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F F T + K+G+G
Sbjct: 121 PGKITFQESKTLSPGDS-FSTFDTPYCKVGLG 151
>sp|Q497B0|NIT2_RAT Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1
Length = 276
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ +Q + S N+ A LVR A +GANI+ + E F Y ++F
Sbjct: 6 LALIQLQVSSIKSDNITRACSLVREAAKQGANIVSLPECFNSPY-----GTNYFPEYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ K+ E+AKE + ++ S EE + YN+ A+ DG+ L +RK H+ D
Sbjct: 61 IPGESTKKLSEVAKENSIYLIGGSIPEEDDGKLYNTCAVFGPDGNLLVKHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F F T + ++G+G
Sbjct: 121 PGKITFQESKTLSPGDS-FSTFDTPYCRVGLG 151
>sp|P60327|DCAS_AGRSK N-carbamoyl-D-amino acid hydrolase OS=Agrobacterium sp. (strain
KNK712) PE=1 SV=1
Length = 304
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 21/142 (14%)
Query: 32 LVRAAHGKGANIILIQEL-----FEGYYFC-QAQREDFFQRAKPYKDHPTILKMQELAKE 85
++ A +GAN I+ EL F ++F +A+ + F++ P P + + E A E
Sbjct: 31 MLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMP---GPVVRPLFEKAAE 87
Query: 86 LGVVMPVSF----FEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQ--------EK 133
LG+ + + E +N+ ++D G +G YRK H+P Y+ EK
Sbjct: 88 LGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEK 147
Query: 134 FYFNPGDTGFKVFQTKFAKIGV 155
YF PGD GF V+ AK+G+
Sbjct: 148 RYFEPGDLGFPVYDVDAAKMGM 169
>sp|Q964D8|BUP1_DICDI Beta-ureidopropionase OS=Dictyostelium discoideum GN=pyd3 PE=1 SV=1
Length = 391
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 27 ATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85
A E+++ AA G N++ +QE + + FC ++ + + A+ +I +Q +A++
Sbjct: 101 AKIEKMIDAAGAMGVNVLCLQETWHMPFAFCTREKYPWVEFAESASTGQSIKFIQRMARK 160
Query: 86 LGVVMPVSFFEEANNAH----YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDT 141
+V+ +S E ++ H +N+ ++ +G+ +G RK+HIP + E Y+
Sbjct: 161 YNMVI-ISPMLERDDVHASTIHNTAVVVGNNGNIIGKSRKNHIPRTGDFNESTYYMESTL 219
Query: 142 GFKVFQTKFAKIGVG 156
G VF+T + KI +
Sbjct: 220 GHPVFETIYGKIAIN 234
>sp|Q4VBV9|NIT2_DANRE Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1
Length = 277
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ +Q + + NL A+ LV+ A G+GA ++++ E F Y FF+
Sbjct: 6 LAVVQLHVSKIKADNLGRAQTLVKEAAGQGAKVVVLPECFNSPY-----GTGFFKEYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ + E AK+ G+ ++ S EE YN+ ++ DG+ L +RK H+ D
Sbjct: 61 IPGESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PG + +F+T + K+GVG
Sbjct: 121 PGKIRFQESETLSPGKS-LSMFETPYCKVGVG 151
>sp|Q9NQR4|NIT2_HUMAN Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV=1
Length = 276
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ +Q + S N+ A +R A +GA I+ + E F Y + +F
Sbjct: 6 LALIQLQISSIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAK-----YFPEYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ K+ E+AKE + ++ S EE YN+ A+ DG+ L YRK H+ D
Sbjct: 61 IPGESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F F T + ++G+G
Sbjct: 121 PGKITFQESKTLSPGDS-FSTFDTPYCRVGLG 151
>sp|Q44185|DCAS_RHIRD N-carbamoyl-D-amino acid hydrolase OS=Rhizobium radiobacter PE=1
SV=1
Length = 304
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 36/173 (20%)
Query: 1 MEKGKRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL-----FEGYYF 55
+ + + RE VV L D+ TN A+ +G N I+ EL F ++F
Sbjct: 15 IARAETREQVVGRLL-----DMLTNAAS----------RGVNFIVFPELALTTFFPRWHF 59
Query: 56 C-QAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSF----FEEANNAHYNSIAIID 110
+A+ + F++ P P + + E A ELG+ + + E +N+ ++D
Sbjct: 60 TDEAELDSFYETEMP---GPVVRPLFETAAELGIGFNLGYAELVVEGGVKRRFNTSILVD 116
Query: 111 ADGSDLGLYRKSHIPDGPGYQ--------EKFYFNPGDTGFKVFQTKFAKIGV 155
G +G YRK H+P Y+ EK YF PGD GF V+ AK+G+
Sbjct: 117 KSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGM 169
>sp|Q2T9R6|NIT2_BOVIN Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1
Length = 276
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ +Q + S NL A L+R A +GA I+ + E F Y + +F
Sbjct: 6 LALIQLQVSSIKSENLTRACGLIREASKQGAQIVSLPECFNSPYGTK-----YFPDYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ K+ E+AKE + V+ S E+ YN+ A+ DG+ L +RK H+ D
Sbjct: 61 IPGDSTQKLSEVAKECSMYVIGGSIPEKDAGKLYNTCAVFGPDGTLLVKHRKLHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F +F T + ++G+G
Sbjct: 121 PGKITFQESETLSPGDS-FSLFDTPYCRVGLG 151
>sp|Q9X0Y0|NADE2_THEMA Probable glutamine-dependent NAD(+) synthetase OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=nadE2 PE=3 SV=1
Length = 576
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF 64
KR V ++ L D NL A +R A +G+++++ ELF Y ED
Sbjct: 2 KRLRVTLAQLN-PTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGY----PPEDLM 56
Query: 65 QRAKPYKDHPTIL-KMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSH 123
R +++ L K + + LGV + + F + +A YN+ A++ DG LG+YRK
Sbjct: 57 LRLSFLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVV-KDGEILGVYRKIS 114
Query: 124 IPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
+P+ + E+ YF PG+ ++ K I VG
Sbjct: 115 LPNYGVFDERRYFKPGE---ELLVVKIGNIKVG 144
>sp|Q10166|YAUB_SCHPO UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC26A3.11 PE=3 SV=1
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQR 66
R + +Q A T D S NL A V A G+N+I++ E+F Y F Q
Sbjct: 42 RAFRIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGY----FNQY 97
Query: 67 AKPYKD-HPTILKMQELAKELGVVM-PVSFFEEANNAHYNSIAIIDADGSDLGLYRKSH- 123
A+P ++ P+ + +AK+ + S E + YN+ + D G + ++RK H
Sbjct: 98 AEPIEESSPSYQALSSMAKDTKTYLFGGSIPERKDGKLYNTAMVFDPSGKLIAVHRKIHL 157
Query: 124 ----IPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
IP G ++E +PGD + T++ K G+G
Sbjct: 158 FDIDIPGGVSFRESDSLSPGD-AMTMVDTEYGKFGLG 193
>sp|Q5R4L6|NIT2_PONAB Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV=1
Length = 275
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ +Q + S N+ A +R A +GA I+ + E F Y + +F
Sbjct: 6 LALIQLQISSINSDNVTRACSFIREAATQGAKIVSLPECFNSPYGTK-----YFPEYAEK 60
Query: 71 KDHPTILKMQELAKELGV-VMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDG 127
+ K+ E+AKE + ++ S EE YN+ A+ DG+ L YRK H+ D
Sbjct: 61 IPGESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDV 120
Query: 128 PG---YQEKFYFNPGDTGFKVFQTKFAKIGVG 156
PG +QE +PGD+ F F T + ++G+G
Sbjct: 121 PGKITFQESKTLSPGDS-FCTFDT-YCRVGLG 150
>sp|O59829|YCU9_SCHPO Probable nitrilase C965.09 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC965.09 PE=4 SV=1
Length = 272
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 21 DVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILK 78
DV NL V N+IL EL Y C F Q A+ + P+
Sbjct: 16 DVKHNLQKMSSYVHEVMESNPSTNLILFPELITSGYECG---NTFTQIAEIAGEGPSFKT 72
Query: 79 MQELAKELGVVMPVSFFEEA---NNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFY 135
M LA + V + F E+ +N YNS I +G+ G+YRK H+ D E+ +
Sbjct: 73 MSNLAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHLFD----TERKH 128
Query: 136 FNPGDTGFKVFQTKFAKIGV 155
F G + F +F+T F K+GV
Sbjct: 129 FKKG-SDFPIFETSFGKLGV 147
>sp|Q8VDK1|NIT1_MOUSE Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 SV=2
Length = 323
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T + N T LV+ A GA + + E F+ F + ++P
Sbjct: 44 LVAVCQVTSTPNKQENFKTCAELVQEAARLGACLAFLPEAFD---FIARNPAETLLLSEP 100
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
+ + +LA+E G+ + + F E N YN ++++ GS + YRK+H
Sbjct: 101 LNGD-LLGQYSQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTH 159
Query: 124 IPD------GPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
+ D GP +E Y PG T +T K+G+
Sbjct: 160 LCDVEIPGQGP-MRESNYTKPGGTLEPPVKTPAGKVGLA 197
>sp|Q32LH4|NIT1_BOVIN Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=1
Length = 328
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T D N T L+R A GA + + E F+ F E+ + ++P
Sbjct: 49 LVAVCQVTSTPDKEQNFKTCAELIREAARLGACLAFLPEAFD---FIARDPEETRRLSEP 105
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
+ + + +LA+E G+ + + F E YN I++ GS + YRK+H
Sbjct: 106 LSGN-LLEEYTQLARECGLWLSLGGFHERGQDWEQTQKIYNCHVIMNNMGSVVATYRKTH 164
Query: 124 IPD------GPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
+ D GP +E PG + T KIG+
Sbjct: 165 LCDVEIPGQGP-MRESNSTIPGPSLESPISTPAGKIGLA 202
>sp|Q7TQ94|NIT1_RAT Nitrilase homolog 1 OS=Rattus norvegicus GN=Nit1 PE=2 SV=1
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T + N T LV+ A GA + + E F+ F + ++P
Sbjct: 13 LVAVCQVTSTPNKQENFKTCAELVQEATRLGACLAFLPEAFD---FIARNPAETLLLSEP 69
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
D + + +LA+E G+ + + F E YN ++++ GS + YRK+H
Sbjct: 70 L-DGDLLGQYSQLARECGIWLSLGGFHERGQDWEQTQKIYNCHVLLNSKGSVVASYRKTH 128
Query: 124 IPD------GPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
+ D GP +E Y PG +T K+G+
Sbjct: 129 LCDVEIPGQGP-MRESNYTMPGYALEPPVKTPAGKVGLA 166
>sp|Q86X76|NIT1_HUMAN Nitrilase homolog 1 OS=Homo sapiens GN=NIT1 PE=1 SV=2
Length = 327
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+V+ Q T D N T LVR A GA + + E F+ F + ++P
Sbjct: 48 LVAVCQVTSTPDKQQNFKTCAELVREAARLGACLAFLPEAFD---FIARDPAETLHLSEP 104
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEE------ANNAHYNSIAIIDADGSDLGLYRKSH 123
+ + +LA+E G+ + + F E YN ++++ G+ + YRK+H
Sbjct: 105 LGGK-LLEEYTQLARECGLWLSLGGFHERGQDWEQTQKIYNCHVLLNSKGAVVATYRKTH 163
Query: 124 IPD------GPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
+ D GP + PG + T KIG+
Sbjct: 164 LCDVEIPGQGPMCESNSTM-PGPSLESPVSTPAGKIGLA 201
>sp|P47016|NIT2_YEAST Probable hydrolase NIT2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NIT2 PE=3 SV=1
Length = 307
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANII--------LIQELFEGYYFCQAQRED 62
V+ Q + D++ NL + L+ A K A+++ L Q Y Q +
Sbjct: 8 VAVAQLCSSADLTKNLKVVKELISEAIQKKADVVFLPEASDYLSQNPLHSRYLAQ-KSPK 66
Query: 63 FFQRAKPYKDHPTILKMQELAKELGVVMPVSF--FEEANNAHYNSIAIIDADGSDLGLYR 120
F ++ + + + +GV +P S E N+ N + ID +G L Y+
Sbjct: 67 FIRQLQSSITDLVRDNSRNIDVSIGVHLPPSEQDLLEGNDRVRNVLLYIDHEGKILQEYQ 126
Query: 121 KSH-----IPDGPGYQEKFYFNPGDTGFKVFQTKFAKIG 154
K H +P+GP +E PG + ++ K+G
Sbjct: 127 KLHLFDVDVPNGPILKESKSVQPGKAIPDIIESPLGKLG 165
>sp|P55175|Y601_SYNY3 UPF0012 hydrolase sll0601 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0601 PE=3 SV=1
Length = 272
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 17/157 (10%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP 69
+ +ALQ +++ NL AE L+ A +GA ++ L E + F + E Q
Sbjct: 5 LAAALQMTSRPNLTENLQEAEELIDLAVRQGAELV---GLPENFAFLGNETEKLEQATAI 61
Query: 70 YKDHPTILKMQELAKELGVVM-----PVSFFEEANNAHYNSIAIIDADGSDLGLYRKSH- 123
L Q +A+ V + P EA A YN+ +I +G +L Y K H
Sbjct: 62 ATATEKFL--QTMAQRFQVTILAGGFPFPVAGEAGKA-YNTATLIAPNGQELARYHKVHL 118
Query: 124 ----IPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIGV 155
+PDG Y E G V+ + F +G+
Sbjct: 119 FDVNVPDGNTYWESATVMAGQKYPPVYHSDSFGNLGL 155
>sp|P49954|NIT3_YEAST Probable hydrolase NIT3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NIT3 PE=1 SV=1
Length = 291
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 7 REVVVSALQFA-CTDDVSTNLATAERLVRAAHGKGAN--IILIQELFEGYYFCQAQREDF 63
+++ V+ +Q + + D NL A + A + + ++++ E F Y R+ +
Sbjct: 9 QKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRK-Y 67
Query: 64 FQRAKPYKDHPTILKMQELAKELGVVM---PVSFFEEANNAHYNSIAIIDADGSDLGLYR 120
+ P + ++ + LA + +++ + + + YN+ I + DG + +R
Sbjct: 68 SEVINPKEPSTSVQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHR 127
Query: 121 KSH-----IPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVG 156
K H IP+G + E +PG+ + TK+ K GVG
Sbjct: 128 KVHLFDVDIPNGISFHESETLSPGEKSTTI-DTKYGKFGVG 167
>sp|P46011|NRL4_ARATH Bifunctional nitrilase/nitrile hydratase NIT4 OS=Arabidopsis
thaliana GN=NIT4 PE=1 SV=1
Length = 355
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 21/171 (12%)
Query: 1 MEKGKRREVVVSALQFACTD--DVSTNLATAERLVRAAHGKGANIILIQELFEGYY---- 54
M G +V + + A T D L AERL+ A G+ +++ E F G Y
Sbjct: 27 MSAGDSSSIVRATVVQASTVFYDTPATLDKAERLLSEAAENGSQLVVFPEAFIGGYPRGS 86
Query: 55 --------FCQAQREDFFQRAKPYKD--HPTILKMQELAKELGVVMPVSFFEEANNAHYN 104
R+DF + D P + ++ +AK+ V + + E Y
Sbjct: 87 TFELAIGSRTAKGRDDFRKYHASAIDVPGPEVERLALMAKKYKVYLVMGVIEREGYTLYC 146
Query: 105 SIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGD-TGFKVFQTKFAKIG 154
++ D+ G LG +RK P E+ + GD + VF T KIG
Sbjct: 147 TVLFFDSQGLFLGKHRKLM----PTALERCIWGFGDGSTIPVFDTPIGKIG 193
>sp|Q9PC24|NADE_XYLFA Probable glutamine-dependent NAD(+) synthetase OS=Xylella
fastidiosa (strain 9a5c) GN=nadE PE=3 SV=1
Length = 545
Score = 36.6 bits (83), Expect = 0.064, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 29 AERLV----RAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83
AER++ +A GA++++ EL GY ED R + H + + A
Sbjct: 23 AERIIALIEQARDEHGADVVMFPELALSGY-----PPEDLLLRPG-FLAHCQVAIERIAA 76
Query: 84 KELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF 143
G+V V + + A + YN +A + DG YRK +P+ + E+ YF G
Sbjct: 77 ATHGIVAVVGWPQSAGSVVYN-VASVLCDGQVEQTYRKRELPNYAVFDERRYFEVDPNGS 135
Query: 144 K-VFQTKFAKIGV 155
+ VF+ K +GV
Sbjct: 136 RCVFKVKGVPVGV 148
>sp|Q87D47|NADE_XYLFT Probable glutamine-dependent NAD(+) synthetase OS=Xylella
fastidiosa (strain Temecula1 / ATCC 700964) GN=nadE PE=3
SV=1
Length = 545
Score = 36.6 bits (83), Expect = 0.065, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 29 AERLV----RAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83
AER++ +A GA++++ EL GY ED R + H + + A
Sbjct: 23 AERIIALIEQARDEHGADVVMFPELALSGY-----PPEDLLLRPG-FLAHCQVAIERIAA 76
Query: 84 KELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF 143
G+V V + + A + YN +A + DG YRK +P+ + E+ YF G
Sbjct: 77 ATHGIVAVVGWPQSAGSVVYN-VASVLCDGQVEQTYRKRELPNYAVFDERRYFEVDPNGS 135
Query: 144 K-VFQTKFAKIGV 155
+ VF+ K +GV
Sbjct: 136 RCVFKVKGVPVGV 148
>sp|Q9CBZ6|NADE_MYCLE Glutamine-dependent NAD(+) synthetase OS=Mycobacterium leprae
(strain TN) GN=nadE PE=3 SV=1
Length = 680
Score = 36.2 bits (82), Expect = 0.082, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQEL-FEGYYFCQAQREDFFQRAK 68
V + A D +TN A+ RL R H G + + EL GY +D A
Sbjct: 14 VAACTHHASIGDPTTNAASVLRLARQCHDDGVAVAVFPELTLSGYSIEDILLQDLLLEAV 73
Query: 69 PYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGP 128
T+L + + +L V+ + + YN+ A+I G LG+ KS++P
Sbjct: 74 ----EDTVLDIVVASADLLPVLVIGAPLRYRHRIYNT-AVIIHRGVVLGVAPKSYLPTYR 128
Query: 129 GYQEKFYFNPGD 140
+ E+ PGD
Sbjct: 129 EFYERRQLAPGD 140
>sp|Q04958|NTE1_YEAST Lysophospholipase NTE1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NTE1 PE=1 SV=1
Length = 1679
Score = 34.3 bits (77), Expect = 0.38, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 64 FQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANN 100
F R P+ HP I M E+ LG V V+ E+A N
Sbjct: 1571 FNRWNPFSSHPNIPNMAEIQVRLGYVASVNALEKAKN 1607
>sp|O68008|BACC_BACLI Bacitracin synthase 3 OS=Bacillus licheniformis GN=bacC PE=3 SV=1
Length = 6359
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 2 EKGKR--REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ 59
EKG R E ++ A DD T + T ++ +G I++ ELF Y+ +A+
Sbjct: 5195 EKGFRLNSEPLIRAALMRTEDDSYTFIWTNHHILLDGWSRG---IIMGELFHMYHMKEAR 5251
Query: 60 REDFFQRAKPYKDHPTILKMQE 81
++ + A+PY D+ L+ Q+
Sbjct: 5252 QKHRLEEARPYSDYIGWLQQQD 5273
>sp|P46010|NRL3_ARATH Nitrilase 3 OS=Arabidopsis thaliana GN=NIT3 PE=1 SV=1
Length = 346
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 19/150 (12%)
Query: 20 DDVSTNLATAERLVRAAHGKGANIILIQELFEGYY------------FCQAQREDF--FQ 65
+D L AE+ + A KGA ++L E F G Y + R++F +
Sbjct: 37 NDTPATLDKAEKFIVEAASKGAKLVLFPEAFIGGYPRGFRFGLAVGVHNEEGRDEFRNYH 96
Query: 66 RAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIP 125
+ P + ++ ELA + V + + E+ Y + G LG +RK
Sbjct: 97 ASAIKVPGPEVERLAELAGKNNVHLVMGAIEKDGYTLYCTALFFSPQGQFLGKHRKVM-- 154
Query: 126 DGPGYQEKFYFNPGD-TGFKVFQTKFAKIG 154
P E+ + GD + V+ T KIG
Sbjct: 155 --PTSLERCIWGQGDGSTIPVYDTPIGKIG 182
>sp|P10045|NRLB_KLEPO Nitrilase, bromoxynil-specific OS=Klebsiella pneumoniae subsp.
ozaenae GN=bxn PE=1 SV=1
Length = 349
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Query: 50 FEGYYFCQAQREDF-----FQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYN 104
+ G+ Q E +++ D P I K++ A+E + + + E A Y
Sbjct: 51 YPGFMLTHNQTETLPFIIKYRKQAIAADGPEIEKIRCAAQEHNIALSFGYSERAGRTLYM 110
Query: 105 SIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGD-TGFKVFQTKFAKIG 154
S +IDADG RK P E+ F GD + +V QT ++G
Sbjct: 111 SQMLIDADGITKIRRRKLK----PTRFERELFGEGDGSDLQVAQTSVGRVG 157
>sp|Q9ZJY8|AMIF_HELPJ Formamidase OS=Helicobacter pylori (strain J99) GN=amiF PE=3 SV=1
Length = 334
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV+ + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVLSIMERNPDSNENPYNTAIIIDPQGKIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKVFQ 147
YRK P P E +Y PGD G V +
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPVCE 154
>sp|P32961|NRL1_ARATH Nitrilase 1 OS=Arabidopsis thaliana GN=NIT1 PE=1 SV=2
Length = 346
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Query: 20 DDVSTNLATAERLVRAAHGKGANIILIQELFEGYY------------FCQAQREDF--FQ 65
+D + AE+ + A KGA ++L E F G Y + R++F +
Sbjct: 37 NDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYPRGFRFGLAVGVHNEEGRDEFRKYH 96
Query: 66 RAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIP 125
+ + P + ++ ++A++ V + + E+ Y ++ G LG +RK
Sbjct: 97 ASAIHVPGPEVARLADVARKNHVYLVMGAIEKEGYTLYCTVLFFSPQGQFLGKHRKLM-- 154
Query: 126 DGPGYQEKFYFNPGD-TGFKVFQTKFAKIG 154
P E+ + GD + V+ T K+G
Sbjct: 155 --PTSLERCIWGQGDGSTIPVYDTPIGKLG 182
>sp|Q01S58|GH109_SOLUE Glycosyl hydrolase family 109 protein OS=Solibacter usitatus
(strain Ellin6076) GN=Acid_6590 PE=3 SV=1
Length = 438
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 54 YFCQAQREDF--FQRAKPYKDHPTILKMQELAKELG 87
YF A+REDF R K +HP K+ ELAKELG
Sbjct: 336 YFDGARREDFETLDRYKEKYEHPLWKKVGELAKELG 371
>sp|B5Z8N3|AMIF_HELPG Formamidase OS=Helicobacter pylori (strain G27) GN=amiF PE=3 SV=1
Length = 334
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGKIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKVFQ 147
YRK P P E +Y PGD G V +
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPVCE 154
>sp|B2UV01|AMIF_HELPS Formamidase OS=Helicobacter pylori (strain Shi470) GN=amiF PE=3
SV=1
Length = 334
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGKIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKVFQ 147
YRK P P E +Y PGD G V +
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPVCE 154
>sp|O76463|NFT1_CAEEL Nitrilase and fragile histidine triad fusion protein NitFhit
OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1
Length = 440
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPY 70
++ Q +D+ N A+ ++ A K ++ + E F+ + ++ D
Sbjct: 17 IAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMAT--- 73
Query: 71 KDHPTILKMQELAKELGVVMPVSFF---EEANNAH-YNSIAIIDADGSDLGLYRKSHIPD 126
D + K +ELA++ + + + + ++ AH +N+ IID+DG Y K H+ D
Sbjct: 74 -DCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFD 132
>sp|O25836|AMIF_HELPY Formamidase OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=amiF PE=1 SV=1
Length = 334
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGAN------IILIQELFEGYYFCQA 58
+V+A+QF D+ N+ E ++R H A II + +G +
Sbjct: 15 LVAAIQFPVPIVNSRKDIDHNI---ESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW 71
Query: 59 QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGL 118
E+F P K+ K + AK GV + ++N YN+ IID G +
Sbjct: 72 LSEEFLLDV-PGKETELYAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILK 130
Query: 119 YRKSHIPDGPGYQEKFYFNPGDTGFKVFQ 147
YRK P P E +Y PGD G V +
Sbjct: 131 YRKL-FPWNP--IEPWY--PGDLGMPVCE 154
>sp|Q03217|NRL2_RHORH Aliphatic nitrilase OS=Rhodococcus rhodochrous GN=nitA PE=1 SV=2
Length = 366
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 72 DHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQ 131
D P + ++ + A++ + + V E + Y + +IDADG + RK P +
Sbjct: 82 DSPHVQRLLDAARDHNIAVVVGISERDGGSLYMTQLVIDADGQLVARRRKLK----PTHV 137
Query: 132 EKFYFNPGD-TGFKVFQTKFAKIG 154
E+ + G+ + V+ FA++G
Sbjct: 138 ERSVYGEGNGSDISVYDMPFARLG 161
>sp|A1RQ92|GPDA_SHESW Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Shewanella sp.
(strain W3-18-1) GN=gpsA PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 31/116 (26%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQ----ELFEGYYFCQAQREDFFQRAKP 69
L CTD+ S N R A GKG +++ Q ++ EGY + +E F
Sbjct: 248 LVLTCTDNQSRN-----RRFGLALGKGCDVMTAQAEIGQVVEGY---RNTKEVF------ 293
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIP 125
LAK LGV MP++ E+ Y + +DA LG +KS P
Sbjct: 294 -----------TLAKRLGVEMPIT--EQIYQVLYQGKSPVDAAKELLGREKKSETP 336
>sp|A4Y1E6|GPDA_SHEPC Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=gpsA PE=3
SV=1
Length = 338
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 31/116 (26%)
Query: 14 LQFACTDDVSTNLATAERLVRAAHGKGANIILIQ----ELFEGYYFCQAQREDFFQRAKP 69
L CTD+ S N R A GKG +++ Q ++ EGY + +E F
Sbjct: 248 LVLTCTDNQSRN-----RRFGLALGKGCDVMTAQAEIGQVVEGY---RNTKEVF------ 293
Query: 70 YKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIP 125
LAK LGV MP++ E+ Y + +DA LG +KS P
Sbjct: 294 -----------TLAKRLGVEMPIT--EQIYQVLYQGKSPVDAAKELLGREKKSETP 336
>sp|Q28397|MMP3_HORSE Stromelysin-1 OS=Equus caballus GN=MMP3 PE=2 SV=1
Length = 477
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDH-PTILKMQELAKE 85
+A L R+A + +N+ L+Q+ E YY + + +R KD P + K+QE+ K
Sbjct: 15 CSAYPLDRSARDEDSNMDLLQDYLEKYYDLGKEMRQYVRR----KDSGPIVKKIQEMQKF 70
Query: 86 LGV 88
LG+
Sbjct: 71 LGL 73
>sp|Q557J5|NIT1_DICDI Nitrilase homolog 1 OS=Dictyostelium discoideum GN=nit1-1 PE=3 SV=1
Length = 291
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 15 QFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKP-YKDH 73
Q T++ N + ++ A N+ + E F F F R Y D
Sbjct: 19 QITSTNNKEDNFRKCKEMIEKAVENKVNLFCLPECFA---FISGGIHQFESRDNAEYLDQ 75
Query: 74 P--TILKMQELAKELGVVMPVSFFEE-----ANNAHYNSIAIIDADGSDLGLYRKSHIPD 126
I + ++LAK+ + + + F E N+ YN+ IID++G + YRK H+ D
Sbjct: 76 KGGIIERYKDLAKQNNIWLSLGGFHEKILDDPNDMIYNTHLIIDSNGVIVCEYRKMHLFD 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,470,559
Number of Sequences: 539616
Number of extensions: 2730083
Number of successful extensions: 5561
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 5521
Number of HSP's gapped (non-prelim): 72
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)