Query 031422
Match_columns 160
No_of_seqs 119 out of 1144
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 22:22:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031422.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031422hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ivz_A Nitrilase; alpha-beta s 100.0 2.1E-35 7.2E-40 216.9 17.2 146 9-160 2-148 (262)
2 3p8k_A Hydrolase, carbon-nitro 100.0 5.4E-35 1.8E-39 216.7 17.3 148 5-160 17-168 (281)
3 1f89_A 32.5 kDa protein YLR351 100.0 7.6E-35 2.6E-39 216.8 17.0 155 1-160 1-171 (291)
4 2w1v_A Nitrilase-2, nitrilase 100.0 1.1E-34 3.7E-39 214.5 17.0 148 7-160 2-155 (276)
5 3hkx_A Amidase; alpha-beta-BET 100.0 4.1E-35 1.4E-39 217.5 13.4 148 5-160 17-167 (283)
6 2e11_A Hydrolase; dimethylarse 100.0 2.1E-34 7.2E-39 211.9 16.0 143 7-160 2-145 (266)
7 2vhh_A CG3027-PA; hydrolase; 2 100.0 6.7E-34 2.3E-38 220.0 16.7 156 5-160 69-236 (405)
8 1uf5_A N-carbamyl-D-amino acid 100.0 3.5E-33 1.2E-37 208.8 16.9 153 7-160 2-173 (303)
9 3ilv_A Glutamine-dependent NAD 100.0 1.3E-32 4.3E-37 223.0 16.4 148 6-160 3-167 (634)
10 3n05_A NH(3)-dependent NAD(+) 100.0 1.2E-32 4.2E-37 221.8 16.2 148 5-160 1-165 (590)
11 4f4h_A Glutamine dependent NAD 100.0 1.6E-32 5.6E-37 219.6 15.2 147 7-160 5-171 (565)
12 3sdb_A Glutamine-dependent NAD 100.0 3.1E-32 1.1E-36 221.9 14.3 148 7-160 11-179 (680)
13 2uxy_A Aliphatic amidase; nitr 100.0 8.5E-31 2.9E-35 198.8 15.8 145 7-160 11-168 (341)
14 1ems_A Nitfhit, NIT-fragIle hi 100.0 2.9E-31 9.9E-36 207.5 13.6 149 7-160 13-171 (440)
15 2dyu_A Formamidase; AMIF, CEK, 100.0 7.5E-31 2.6E-35 198.7 15.3 146 7-160 12-168 (334)
16 3hkx_A Amidase; alpha-beta-BET 92.6 0.52 1.8E-05 34.1 7.4 70 32-118 173-244 (283)
17 3p8k_A Hydrolase, carbon-nitro 90.7 1 3.5E-05 32.5 7.3 69 33-118 175-245 (281)
18 2dyu_A Formamidase; AMIF, CEK, 88.4 2.3 7.8E-05 31.6 7.7 70 32-118 174-245 (334)
19 2uxy_A Aliphatic amidase; nitr 88.3 2 6.8E-05 32.0 7.4 70 32-118 174-245 (341)
20 3obe_A Sugar phosphate isomera 87.7 4.1 0.00014 29.6 8.6 73 9-92 90-168 (305)
21 4fva_A 5'-tyrosyl-DNA phosphod 87.5 0.46 1.6E-05 32.9 3.3 42 6-50 9-54 (256)
22 1f89_A 32.5 kDa protein YLR351 87.2 1.7 6E-05 31.3 6.4 70 33-118 178-250 (291)
23 3ivz_A Nitrilase; alpha-beta s 86.5 3 0.0001 29.6 7.2 67 32-118 154-222 (262)
24 4f4h_A Glutamine dependent NAD 86.0 2.1 7.1E-05 34.4 6.7 72 32-118 177-250 (565)
25 2w1v_A Nitrilase-2, nitrilase 85.1 2 6.7E-05 30.8 5.7 69 33-117 162-233 (276)
26 2e11_A Hydrolase; dimethylarse 84.1 4.5 0.00015 28.7 7.2 62 40-118 165-229 (266)
27 3n05_A NH(3)-dependent NAD(+) 80.7 11 0.00037 30.3 8.9 72 32-118 172-245 (590)
28 2j6v_A UV endonuclease, UVDE; 78.9 12 0.00041 27.3 8.0 64 23-93 57-122 (301)
29 3cqj_A L-ribulose-5-phosphate 78.8 11 0.00037 26.8 7.7 62 23-92 104-165 (295)
30 3kws_A Putative sugar isomeras 78.6 9.9 0.00034 26.9 7.4 64 23-92 100-164 (287)
31 1ems_A Nitfhit, NIT-fragIle hi 78.3 4.8 0.00016 30.9 5.9 71 32-118 177-250 (440)
32 3ngf_A AP endonuclease, family 78.2 15 0.00051 25.7 9.5 61 22-92 88-149 (269)
33 3tva_A Xylose isomerase domain 76.4 13 0.00046 26.2 7.6 61 22-92 97-157 (290)
34 2vhh_A CG3027-PA; hydrolase; 2 75.2 3.7 0.00013 31.4 4.5 67 34-116 244-328 (405)
35 4gz1_A Tyrosyl-DNA phosphodies 73.6 3 0.0001 28.5 3.4 37 10-49 9-49 (256)
36 1vyb_A ORF2 contains A reverse 72.0 6 0.00021 26.8 4.6 42 7-52 6-47 (238)
37 4f1h_A Tyrosyl-DNA phosphodies 72.0 2.4 8.1E-05 28.7 2.5 39 8-49 3-43 (250)
38 3bdk_A D-mannonate dehydratase 70.7 32 0.0011 26.1 9.2 41 9-49 78-126 (386)
39 1vli_A Spore coat polysacchari 70.6 20 0.00067 27.3 7.4 73 21-95 38-122 (385)
40 1k77_A EC1530, hypothetical pr 70.2 24 0.00081 24.3 9.5 61 22-92 80-142 (260)
41 3l23_A Sugar phosphate isomera 69.9 23 0.00079 25.4 7.6 59 23-92 104-164 (303)
42 3teb_A Endonuclease/exonucleas 69.0 11 0.00038 26.0 5.6 41 8-51 3-45 (266)
43 1i60_A IOLI protein; beta barr 68.7 17 0.0006 25.2 6.6 60 23-92 80-141 (278)
44 3dx5_A Uncharacterized protein 67.7 29 0.00098 24.3 9.0 74 9-92 62-141 (286)
45 1uf5_A N-carbamyl-D-amino acid 67.1 18 0.00061 26.0 6.5 41 78-118 218-260 (303)
46 3qc0_A Sugar isomerase; TIM ba 66.4 21 0.00071 24.8 6.6 63 23-92 79-141 (275)
47 3ayv_A Putative uncharacterize 65.5 20 0.00068 24.8 6.3 60 23-92 72-135 (254)
48 4gew_A 5'-tyrosyl-DNA phosphod 64.7 5.8 0.0002 29.7 3.5 40 7-49 116-159 (362)
49 1wdu_A TRAS1 ORF2P; four-layer 64.4 7.3 0.00025 26.9 3.8 39 10-52 19-57 (245)
50 3cny_A Inositol catabolism pro 62.0 39 0.0013 23.8 7.9 64 23-92 86-159 (301)
51 2ei9_A Non-LTR retrotransposon 61.1 9.3 0.00032 26.7 3.8 36 11-50 8-43 (240)
52 4eo3_A Bacterioferritin comigr 59.3 14 0.00047 27.2 4.6 24 101-124 100-123 (322)
53 2hk0_A D-psicose 3-epimerase; 59.2 45 0.0016 23.7 8.2 64 23-92 103-169 (309)
54 3u0h_A Xylose isomerase domain 59.2 31 0.0011 24.0 6.4 62 22-92 79-140 (281)
55 3qfm_A SAPH, putative uncharac 59.0 7.7 0.00026 27.7 3.1 41 5-50 8-49 (270)
56 3mpr_A Putative endonuclease/e 58.8 22 0.00074 25.3 5.6 23 28-50 31-53 (298)
57 3hp4_A GDSL-esterase; psychrot 57.5 29 0.001 22.3 5.7 58 21-91 84-141 (185)
58 2eja_A URO-D, UPD, uroporphyri 55.8 48 0.0016 24.3 7.1 54 28-90 180-234 (338)
59 3vni_A Xylose isomerase domain 55.8 50 0.0017 23.2 7.5 63 23-92 84-150 (294)
60 3rjt_A Lipolytic protein G-D-S 54.9 42 0.0014 22.0 6.7 61 22-91 112-172 (216)
61 4h41_A Putative alpha-L-fucosi 53.6 66 0.0022 24.0 7.5 68 26-95 53-121 (340)
62 1iuq_A Glycerol-3-phosphate ac 53.5 13 0.00045 28.1 3.6 63 22-89 205-267 (367)
63 2wqp_A Polysialic acid capsule 51.7 29 0.00099 26.0 5.3 73 21-95 29-112 (349)
64 2qw5_A Xylose isomerase-like T 51.4 66 0.0022 23.2 8.1 64 23-92 105-182 (335)
65 1ivn_A Thioesterase I; hydrola 50.5 33 0.0011 22.3 5.1 69 10-91 64-137 (190)
66 2zds_A Putative DNA-binding pr 50.4 50 0.0017 23.7 6.5 64 23-92 107-178 (340)
67 3qxb_A Putative xylose isomera 50.2 35 0.0012 24.5 5.6 65 23-92 110-177 (316)
68 3g91_A MTH0212, exodeoxyribonu 49.2 19 0.00066 25.0 3.9 20 32-51 22-41 (265)
69 3ilv_A Glutamine-dependent NAD 47.9 28 0.00097 28.2 5.1 70 33-118 175-247 (634)
70 2q02_A Putative cytoplasmic pr 47.6 57 0.0019 22.5 6.2 72 9-92 65-138 (272)
71 2qul_A D-tagatose 3-epimerase; 47.1 40 0.0014 23.6 5.4 64 23-92 84-151 (290)
72 3ck2_A Conserved uncharacteriz 47.0 17 0.00057 23.8 3.1 34 7-46 5-38 (176)
73 1hd7_A DNA-(apurinic or apyrim 45.2 40 0.0014 24.2 5.2 39 10-52 61-100 (318)
74 1xla_A D-xylose isomerase; iso 44.8 95 0.0033 23.2 8.0 63 23-92 112-179 (394)
75 3g12_A Putative lactoylglutath 44.5 43 0.0015 20.3 4.7 43 76-121 77-120 (128)
76 2inf_A URO-D, UPD, uroporphyri 44.4 86 0.0029 23.2 7.0 53 29-90 195-247 (359)
77 2o3h_A DNA-(apurinic or apyrim 44.4 41 0.0014 23.4 5.0 39 10-52 28-67 (285)
78 2voa_A AF_EXO, XTHA, exodeoxyr 42.0 24 0.00081 24.1 3.4 23 26-51 16-38 (257)
79 1r3s_A URO-D, uroporphyrinogen 40.4 1.1E+02 0.0038 22.7 7.1 48 28-84 198-245 (367)
80 1s3l_A Hypothetical protein MJ 40.2 24 0.00083 23.5 3.1 34 9-47 26-59 (190)
81 2yv1_A Succinyl-COA ligase [AD 40.2 74 0.0025 23.0 5.9 45 27-92 81-126 (294)
82 2jc5_A Exodeoxyribonuclease; h 39.9 32 0.0011 23.4 3.8 21 32-52 20-40 (259)
83 3g8r_A Probable spore coat pol 39.9 39 0.0013 25.3 4.4 84 5-95 3-99 (350)
84 2jc4_A Exodeoxyribonuclease II 39.2 30 0.001 23.5 3.6 23 30-52 16-38 (256)
85 3nvt_A 3-deoxy-D-arabino-heptu 39.0 1.3E+02 0.0043 22.9 7.5 62 25-96 154-215 (385)
86 3p6l_A Sugar phosphate isomera 38.6 88 0.003 21.5 6.0 43 27-92 91-133 (262)
87 3tif_A Uncharacterized ABC tra 38.5 61 0.0021 22.4 5.1 65 38-118 161-226 (235)
88 3g6s_A Putative endonuclease/e 38.3 23 0.00078 24.5 2.8 22 26-50 27-48 (267)
89 3dmy_A Protein FDRA; predicted 38.0 57 0.002 25.6 5.2 46 27-93 47-92 (480)
90 3me7_A Putative uncharacterize 38.0 37 0.0013 21.9 3.7 41 77-122 104-146 (170)
91 1k7c_A Rhamnogalacturonan acet 37.1 96 0.0033 21.0 7.1 19 73-91 149-167 (233)
92 3cpr_A Dihydrodipicolinate syn 37.1 66 0.0023 23.3 5.2 55 25-96 96-152 (304)
93 2r91_A 2-keto-3-deoxy-(6-phosp 36.4 68 0.0023 23.0 5.2 56 25-96 75-132 (286)
94 2vc6_A MOSA, dihydrodipicolina 36.2 71 0.0024 23.0 5.3 54 25-95 80-135 (292)
95 3ff4_A Uncharacterized protein 35.9 63 0.0022 20.0 4.3 42 27-92 69-110 (122)
96 1oi7_A Succinyl-COA synthetase 35.7 1.1E+02 0.0036 22.1 6.1 45 27-92 75-120 (288)
97 3ewb_X 2-isopropylmalate synth 35.6 1.2E+02 0.004 21.9 6.3 31 19-49 113-143 (293)
98 1xky_A Dihydrodipicolinate syn 35.2 63 0.0022 23.4 4.9 55 25-96 92-148 (301)
99 2nuw_A 2-keto-3-deoxygluconate 35.0 73 0.0025 22.9 5.1 74 25-115 76-159 (288)
100 3cnb_A DNA-binding response re 34.6 55 0.0019 19.6 4.0 18 1-18 1-18 (143)
101 3gkn_A Bacterioferritin comigr 33.9 52 0.0018 20.6 3.9 27 21-47 50-76 (163)
102 3nav_A Tryptophan synthase alp 33.7 72 0.0025 22.9 4.9 16 76-91 139-154 (271)
103 3d0c_A Dihydrodipicolinate syn 33.5 79 0.0027 23.1 5.1 51 25-92 91-142 (314)
104 4hf7_A Putative acylhydrolase; 33.3 1E+02 0.0036 20.3 7.2 66 21-91 99-164 (209)
105 3tn4_A Phosphotriesterase; lac 32.9 1.5E+02 0.0052 22.1 7.0 53 21-93 77-129 (360)
106 3lmz_A Putative sugar isomeras 32.9 1E+02 0.0035 21.1 5.6 44 26-92 88-131 (257)
107 2ehh_A DHDPS, dihydrodipicolin 32.8 87 0.003 22.5 5.2 55 25-96 80-136 (294)
108 1tz9_A Mannonate dehydratase; 32.6 1.5E+02 0.0051 21.8 10.1 38 9-46 69-114 (367)
109 1j5p_A Aspartate dehydrogenase 32.1 91 0.0031 22.2 5.1 47 27-92 71-117 (253)
110 3ixr_A Bacterioferritin comigr 32.1 69 0.0024 20.7 4.3 26 22-47 67-92 (179)
111 3tue_A Tryparedoxin peroxidase 31.9 91 0.0031 21.5 5.0 34 80-119 130-163 (219)
112 3vnd_A TSA, tryptophan synthas 31.8 74 0.0025 22.7 4.7 16 76-91 137-152 (267)
113 2yxg_A DHDPS, dihydrodipicolin 31.7 69 0.0024 23.0 4.6 55 25-96 80-136 (289)
114 4e38_A Keto-hydroxyglutarate-a 31.2 53 0.0018 23.0 3.7 18 79-96 119-136 (232)
115 1j93_A UROD, uroporphyrinogen 30.8 1.6E+02 0.0054 21.6 7.1 49 29-86 195-243 (353)
116 2yv2_A Succinyl-COA synthetase 30.8 90 0.0031 22.5 5.0 44 28-92 83-127 (297)
117 4hde_A SCO1/SENC family lipopr 30.7 41 0.0014 21.8 3.0 19 104-122 135-153 (170)
118 3b4u_A Dihydrodipicolinate syn 30.6 94 0.0032 22.4 5.1 56 25-96 83-143 (294)
119 3ign_A Diguanylate cyclase; gg 30.4 1E+02 0.0036 19.4 5.3 40 8-47 129-169 (177)
120 3kol_A Oxidoreductase, glyoxal 30.2 95 0.0032 18.8 5.6 44 74-120 107-150 (156)
121 1uf3_A Hypothetical protein TT 30.1 35 0.0012 22.8 2.6 21 27-47 19-39 (228)
122 3daq_A DHDPS, dihydrodipicolin 30.0 78 0.0027 22.8 4.6 54 25-96 82-138 (292)
123 1w3i_A EDA, 2-keto-3-deoxy glu 29.6 87 0.003 22.5 4.8 56 25-96 76-133 (293)
124 2g2c_A Putative molybdenum cof 28.9 45 0.0015 21.8 2.9 24 26-49 55-78 (167)
125 3fq8_A Glutamate-1-semialdehyd 28.7 1.1E+02 0.0038 22.7 5.5 20 73-92 219-238 (427)
126 1muw_A Xylose isomerase; atomi 28.7 1.8E+02 0.0061 21.6 7.2 63 23-92 112-179 (386)
127 3k28_A Glutamate-1-semialdehyd 28.6 1.4E+02 0.0047 22.2 6.0 20 73-92 220-239 (429)
128 2rfg_A Dihydrodipicolinate syn 28.6 79 0.0027 22.8 4.4 55 25-96 80-136 (297)
129 3tvk_A DGC, diguanylate cyclas 28.6 1.3E+02 0.0044 19.8 5.7 41 8-48 123-164 (179)
130 1f6k_A N-acetylneuraminate lya 28.3 82 0.0028 22.7 4.4 55 25-96 84-140 (293)
131 1vr6_A Phospho-2-dehydro-3-deo 28.3 1.9E+02 0.0064 21.6 7.0 59 25-97 118-180 (350)
132 2fyw_A Conserved hypothetical 27.9 1.6E+02 0.0056 20.8 6.5 52 30-93 49-100 (267)
133 2r8w_A AGR_C_1641P; APC7498, d 27.4 85 0.0029 23.1 4.5 54 26-96 115-170 (332)
134 2wkj_A N-acetylneuraminate lya 27.2 89 0.003 22.6 4.5 55 25-96 91-148 (303)
135 3n8h_A Pantothenate synthetase 26.9 15 0.00051 26.4 0.2 81 15-95 63-177 (264)
136 3mxt_A Pantothenate synthetase 26.9 17 0.00058 26.5 0.5 34 15-48 63-96 (285)
137 1yx1_A Hypothetical protein PA 26.6 76 0.0026 21.9 4.0 22 27-48 84-105 (264)
138 3inn_A Pantothenate synthetase 26.5 17 0.00057 26.9 0.4 81 15-95 82-195 (314)
139 3sk2_A EHPR; antibiotic resist 26.5 1.1E+02 0.0037 18.3 5.8 44 74-120 84-130 (132)
140 2v9d_A YAGE; dihydrodipicolini 26.4 80 0.0027 23.4 4.2 54 25-95 111-166 (343)
141 1vs1_A 3-deoxy-7-phosphoheptul 26.3 1.8E+02 0.0062 20.8 6.2 59 25-97 50-112 (276)
142 3s5o_A 4-hydroxy-2-oxoglutarat 26.3 1.1E+02 0.0038 22.2 4.8 57 25-96 94-152 (307)
143 3qfe_A Putative dihydrodipicol 26.3 62 0.0021 23.7 3.5 56 25-96 91-149 (318)
144 3tui_C Methionine import ATP-b 26.1 47 0.0016 25.0 2.8 67 36-117 177-244 (366)
145 3sig_A PArg, poly(ADP-ribose) 26.1 82 0.0028 22.8 4.0 28 23-50 194-221 (277)
146 3pzy_A MOG; ssgcid, seattle st 25.9 65 0.0022 21.1 3.3 23 27-49 53-75 (164)
147 3tha_A Tryptophan synthase alp 25.8 1E+02 0.0035 21.9 4.4 42 29-92 105-146 (252)
148 3cyv_A URO-D, UPD, uroporphyri 25.8 1.1E+02 0.0036 22.5 4.8 50 27-85 187-236 (354)
149 3flu_A DHDPS, dihydrodipicolin 25.8 1.5E+02 0.0051 21.3 5.5 55 25-96 87-143 (297)
150 2vup_A Glutathione peroxidase- 25.7 1.4E+02 0.0048 19.3 7.0 26 21-46 62-87 (190)
151 3m5v_A DHDPS, dihydrodipicolin 25.7 1.5E+02 0.005 21.4 5.4 56 25-96 88-144 (301)
152 3qze_A DHDPS, dihydrodipicolin 25.7 1.5E+02 0.005 21.6 5.5 55 25-96 103-159 (314)
153 2ojp_A DHDPS, dihydrodipicolin 25.4 70 0.0024 23.0 3.6 55 25-96 81-137 (292)
154 2zvr_A Uncharacterized protein 25.3 95 0.0033 21.7 4.3 25 23-47 109-133 (290)
155 2zay_A Response regulator rece 25.3 97 0.0033 18.6 4.0 18 1-18 1-18 (147)
156 1d2f_A MALY protein; aminotran 25.0 1.9E+02 0.0064 21.0 6.1 19 74-92 182-200 (390)
157 1g6h_A High-affinity branched- 24.8 1.8E+02 0.0061 20.2 6.5 66 36-117 167-233 (257)
158 3fdb_A Beta C-S lyase, putativ 24.7 1.9E+02 0.0067 20.6 6.1 19 74-92 170-188 (377)
159 3p94_A GDSL-like lipase; serin 24.6 1.4E+02 0.0049 19.1 7.4 76 10-91 76-159 (204)
160 2rli_A SCO2 protein homolog, m 24.4 1.3E+02 0.0046 18.7 5.6 42 78-120 102-147 (171)
161 1geq_A Tryptophan synthase alp 24.2 1.7E+02 0.0059 20.0 5.4 18 77-94 123-140 (248)
162 1c7n_A Cystalysin; transferase 24.1 1.5E+02 0.0051 21.5 5.4 19 74-92 184-202 (399)
163 3icl_A EAL/ggdef domain protei 24.1 1.4E+02 0.0047 18.7 5.4 41 8-48 120-162 (171)
164 3can_A Pyruvate-formate lyase- 23.9 1.5E+02 0.0051 19.1 5.5 21 73-93 159-181 (182)
165 3l1w_A Uncharacterized protein 23.9 44 0.0015 22.8 2.3 24 24-50 22-45 (257)
166 4g6x_A Glyoxalase/bleomycin re 23.8 1.4E+02 0.0046 18.5 5.5 42 76-120 109-150 (155)
167 3eb2_A Putative dihydrodipicol 23.8 1.3E+02 0.0044 21.7 4.8 55 25-97 84-141 (300)
168 3l44_A Glutamate-1-semialdehyd 23.8 1.8E+02 0.006 21.6 5.8 20 73-92 222-241 (434)
169 4hc5_A Glyoxalase/bleomycin re 23.8 1.2E+02 0.004 17.8 5.5 43 76-120 90-132 (133)
170 2nu8_A Succinyl-COA ligase [AD 23.7 1.8E+02 0.0061 20.8 5.5 44 28-92 76-120 (288)
171 4eg0_A D-alanine--D-alanine li 23.6 2E+02 0.0069 20.4 6.2 41 7-47 12-52 (317)
172 2x5d_A Probable aminotransfera 23.6 1.3E+02 0.0043 22.2 4.9 19 74-92 192-210 (412)
173 3kax_A Aminotransferase, class 23.5 2.1E+02 0.0071 20.5 6.1 19 74-92 176-194 (383)
174 2ggt_A SCO1 protein homolog, m 23.5 1.4E+02 0.0047 18.4 5.9 43 77-120 98-144 (164)
175 2r6a_A DNAB helicase, replicat 23.5 2.5E+02 0.0084 21.4 6.6 62 27-94 299-362 (454)
176 1iay_A ACC synthase 2, 1-amino 23.3 1.9E+02 0.0065 21.3 5.9 52 26-92 172-226 (428)
177 1wjo_A T-plastin; CH domain, a 23.2 48 0.0016 20.8 2.1 31 21-51 66-96 (124)
178 1ako_A Exonuclease III; AP-end 23.2 37 0.0013 23.2 1.7 24 26-52 15-38 (268)
179 1rtt_A Conserved hypothetical 23.0 84 0.0029 20.6 3.5 40 5-46 3-42 (193)
180 3rmj_A 2-isopropylmalate synth 22.9 2.2E+02 0.0074 21.4 6.0 30 20-49 121-150 (370)
181 3dod_A Adenosylmethionine-8-am 22.7 2.1E+02 0.0072 21.4 6.1 20 73-92 231-250 (448)
182 4h08_A Putative hydrolase; GDS 22.7 1.6E+02 0.0055 19.0 6.8 18 74-91 140-157 (200)
183 4hb7_A Dihydropteroate synthas 22.6 2.2E+02 0.0075 20.5 7.6 55 4-58 3-62 (270)
184 1z47_A CYSA, putative ABC-tran 22.6 2.4E+02 0.0082 21.0 6.1 65 38-117 161-226 (355)
185 4evm_A Thioredoxin family prot 22.4 77 0.0026 18.6 3.0 18 103-120 105-122 (138)
186 1o5k_A DHDPS, dihydrodipicolin 22.4 86 0.003 22.7 3.6 21 25-45 92-112 (306)
187 2ihy_A ABC transporter, ATP-bi 22.4 2.1E+02 0.0073 20.2 6.5 67 36-117 175-243 (279)
188 3hmu_A Aminotransferase, class 22.4 2.6E+02 0.0087 21.3 6.5 20 73-92 243-262 (472)
189 4e77_A Glutamate-1-semialdehyd 22.4 1.6E+02 0.0056 21.8 5.4 20 73-92 220-239 (429)
190 3a24_A Alpha-galactosidase; gl 22.3 2.3E+02 0.0079 23.2 6.3 60 24-92 306-365 (641)
191 1vem_A Beta-amylase; beta-alph 22.2 2.9E+02 0.0098 21.8 6.8 82 3-94 5-88 (516)
192 3d31_A Sulfate/molybdate ABC t 22.2 2.4E+02 0.0083 20.8 6.7 65 38-117 143-208 (348)
193 3mil_A Isoamyl acetate-hydroly 22.1 1.4E+02 0.0048 19.7 4.6 68 21-91 94-167 (240)
194 4gqc_A Thiol peroxidase, perox 22.1 83 0.0028 20.1 3.2 15 105-119 123-137 (164)
195 2d73_A Alpha-glucosidase SUSB; 22.0 2E+02 0.0067 24.0 5.9 66 24-92 368-436 (738)
196 2o14_A Hypothetical protein YX 22.0 2.5E+02 0.0084 20.8 7.4 75 10-91 232-313 (375)
197 1jmv_A USPA, universal stress 21.9 66 0.0023 19.5 2.6 18 32-49 94-111 (141)
198 1ohv_A 4-aminobutyrate aminotr 21.8 2.7E+02 0.0091 21.2 6.8 20 73-92 278-297 (472)
199 3dwv_A Glutathione peroxidase- 21.8 43 0.0015 21.9 1.8 27 21-47 60-86 (187)
200 3h5d_A DHDPS, dihydrodipicolin 21.7 1.6E+02 0.0054 21.4 4.9 54 25-96 87-144 (311)
201 3sdb_A Glutamine-dependent NAD 21.7 2E+02 0.0067 23.6 5.9 17 35-51 189-205 (680)
202 3ey7_A Biphenyl-2,3-DIOL 1,2-d 21.7 1.3E+02 0.0045 17.5 4.6 45 76-120 84-129 (133)
203 2x7v_A Probable endonuclease 4 21.7 2E+02 0.0069 19.7 6.5 25 23-47 85-109 (287)
204 1ass_A Thermosome; chaperonin, 21.7 1.7E+02 0.0058 18.9 5.7 83 8-96 21-123 (159)
205 2pjk_A 178AA long hypothetical 21.6 72 0.0025 21.2 2.8 23 27-49 67-90 (178)
206 3rlf_A Maltose/maltodextrin im 21.6 1.9E+02 0.0064 21.8 5.4 64 39-117 150-214 (381)
207 2pcj_A ABC transporter, lipopr 21.5 1.2E+02 0.0042 20.6 4.1 40 74-116 178-218 (224)
208 2z08_A Universal stress protei 21.5 69 0.0024 19.4 2.6 18 32-49 91-108 (137)
209 3mtk_A Diguanylate cyclase/pho 21.4 1.6E+02 0.0054 18.7 4.6 41 8-48 122-164 (178)
210 1mkz_A Molybdenum cofactor bio 21.1 72 0.0025 21.0 2.8 24 26-49 54-78 (172)
211 1gml_A T-complex protein 1 sub 21.1 1.8E+02 0.0063 19.1 5.4 83 8-96 27-129 (178)
212 3tc3_A UV damage endonuclease; 21.1 2.5E+02 0.0086 20.6 8.1 66 22-92 55-120 (310)
213 1q77_A Hypothetical protein AQ 21.1 70 0.0024 19.3 2.6 17 32-48 101-117 (138)
214 3q12_A Pantoate--beta-alanine 21.0 17 0.00058 26.5 -0.4 29 21-49 70-98 (287)
215 3hgm_A Universal stress protei 21.0 77 0.0026 19.3 2.8 19 31-49 101-119 (147)
216 3lda_A DNA repair protein RAD5 21.0 2.7E+02 0.0093 21.0 6.3 63 27-92 260-323 (400)
217 1uuy_A CNX1, molybdopterin bio 21.0 75 0.0026 20.7 2.8 24 26-49 56-80 (167)
218 1x52_A Pelota homolog, CGI-17; 20.9 76 0.0026 19.8 2.7 27 27-53 74-100 (124)
219 3mfq_A TROA, high-affinity zin 20.8 1.5E+02 0.005 21.2 4.6 47 25-92 197-243 (282)
220 3oks_A 4-aminobutyrate transam 20.6 2.8E+02 0.0094 20.9 6.8 20 73-92 247-266 (451)
221 3drn_A Peroxiredoxin, bacterio 20.5 80 0.0028 19.8 2.9 19 103-121 111-129 (161)
222 2hmc_A AGR_L_411P, dihydrodipi 20.4 1.2E+02 0.004 22.6 4.0 55 25-95 103-160 (344)
223 3rfq_A Pterin-4-alpha-carbinol 20.2 79 0.0027 21.2 2.8 23 27-49 76-98 (185)
224 2cvh_A DNA repair and recombin 20.2 1.9E+02 0.0065 18.8 5.6 47 40-92 105-151 (220)
225 4ffc_A 4-aminobutyrate aminotr 20.1 2.8E+02 0.0097 20.8 7.0 20 73-92 245-264 (453)
226 2pcq_A Putative dihydrodipicol 20.1 1.5E+02 0.0052 21.1 4.5 54 25-96 73-128 (283)
227 1xzo_A BSSCO, hypothetical pro 20.1 72 0.0025 20.1 2.6 18 104-121 137-154 (174)
228 4g2e_A Peroxiredoxin; redox pr 20.1 78 0.0027 20.0 2.7 16 104-119 120-135 (157)
229 1g29_1 MALK, maltose transport 20.0 2.7E+02 0.0092 20.8 6.0 65 38-117 155-220 (372)
No 1
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=2.1e-35 Score=216.86 Aligned_cols=146 Identities=34% Similarity=0.584 Sum_probs=131.0
Q ss_pred cEEEEEeCCCC-CCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcC
Q 031422 9 VVVSALQFACT-DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELG 87 (160)
Q Consensus 9 ~~va~~Q~~~~-~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 87 (160)
||||++|+++. .|++.|++++.+++++|+++++|||||||++++||...+ ..++.+.+++..++..++.|+++|++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~-~~~~~~~a~~~~~~~~~~~l~~~a~~~~ 80 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFET-REEVFEIAQKIPEGETTTFLMDVARDTG 80 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSC-HHHHHHHCBCTTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCC-HHHHHHhcCccCCCHHHHHHHHHHHHcC
Confidence 79999999994 899999999999999999999999999999999997654 2245566665445789999999999999
Q ss_pred cEEEeccccccCCeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeEEeCCeeEEEEeccC
Q 031422 88 VVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVGKGFY 160 (160)
Q Consensus 88 i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~~~~~~rig~~ICy~ 160 (160)
+++++|++++.++++||++++++++| ++..|+|+||+ +.|..+|.+|+..+.+|+++++|+|++||||
T Consensus 81 ~~iv~G~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~----~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D 148 (262)
T 3ivz_A 81 VYIVAGTAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF----YREKFFFEPGDLGFRVFDLGFMKVGVMICFD 148 (262)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTE-EEEEEECSSCC----GGGGGTCBCCCSCSCEEECSSCEEEECCGGG
T ss_pred cEEEEeEEEeeCCcEEEEEEEEcCCe-eEEEEeecccC----CchhceEeCCCCCceEEEECCEEEEEEEecC
Confidence 99999999988999999999999999 99999999995 3789999999833799999999999999998
No 2
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.4e-35 Score=216.70 Aligned_cols=148 Identities=15% Similarity=0.193 Sum_probs=131.6
Q ss_pred CCcccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHH
Q 031422 5 KRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83 (160)
Q Consensus 5 ~~~~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 83 (160)
++.+||||++|+++ ..|++.|++++.+++++|+++++|||||||++++||... ++...+++. .+...+.|+++|
T Consensus 17 ~~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~----~~~~~a~~~-~~~~~~~l~~la 91 (281)
T 3p8k_A 17 RGSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLE----HLNEKADNN-LGQSFSFIKHLA 91 (281)
T ss_dssp TTSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGG----GHHHHSEET-THHHHHHHHHHH
T ss_pred cCCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChh----HHHHhhhcc-CcHHHHHHHHHH
Confidence 45789999999999 589999999999999999999999999999999999854 345555543 368899999999
Q ss_pred HHcCcEEEeccc-cccCCeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCc-eeEEe-CCeeEEEEeccC
Q 031422 84 KELGVVMPVSFF-EEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF-KVFQT-KFAKIGVGKGFY 160 (160)
Q Consensus 84 ~~~~i~i~~g~~-~~~~~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~-~v~~~-~~~rig~~ICy~ 160 (160)
+++++++++|.+ ++.++++||++++++++|+++..|+|+||++. |.|..+|.+|+. . .+|++ +++|+|++||||
T Consensus 92 ~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--f~E~~~f~~G~~-~~~v~~~~~~~~ig~~IC~D 168 (281)
T 3p8k_A 92 EKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPM--LREHEFLTAGEY-VAEPFQLSDGTYVTQLICYD 168 (281)
T ss_dssp HHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCTT--TTGGGTCCCCSS-CCCCEECTTCCEEEEEEGGG
T ss_pred hhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCCC--cCccccCcCCCC-CceeEEeCCCcEEEEEEecC
Confidence 999999999975 56788999999999999999999999999863 578999999997 6 89999 999999999998
No 3
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=7.6e-35 Score=216.75 Aligned_cols=155 Identities=22% Similarity=0.374 Sum_probs=128.7
Q ss_pred CCCC--CCcccEEEEEeCC-CCCCHHHHHHHHHHHHHHH--HhCCCcEEEeccccccccccccchhhHhhhcccC-CC--
Q 031422 1 MEKG--KRREVVVSALQFA-CTDDVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREDFFQRAKPY-KD-- 72 (160)
Q Consensus 1 ~~~~--~~~~~~va~~Q~~-~~~~~~~n~~~~~~~i~~a--~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~-~~-- 72 (160)
||.+ |.+++|||++|++ ...+.+.|++++.+++++| ++.++|||||||++++||... ++...++.. ..
T Consensus 1 ~~~~~~m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~----~~~~~~~~~~~~~~ 76 (291)
T 1f89_A 1 MSASKILSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTD----QFRKYSEVINPKEP 76 (291)
T ss_dssp -CCSSSBSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHH----HHHHHTTBCCSSSC
T ss_pred CCccccccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChH----HHHHHhhhhccCCC
Confidence 4544 5567999999999 4789999999999999999 889999999999999998643 344455543 13
Q ss_pred ChHHHHHHHHHHHcCcEEEecc-ccccC--CeeeEEEEEEcCCCCEeEEeeeccCCC-----CCCcccceeecCCCCCce
Q 031422 73 HPTILKMQELAKELGVVMPVSF-FEEAN--NAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFK 144 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~g~-~~~~~--~~~~Ns~~~i~~~G~i~~~y~K~~l~~-----~~~~~e~~~~~~g~~~~~ 144 (160)
+...+.|+++|+++++++++|. +++.+ +++||++++++++|+++.+|+|+||++ ...+.|..+|.+|+. +.
T Consensus 77 ~~~~~~l~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~-~~ 155 (291)
T 1f89_A 77 STSVQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK-ST 155 (291)
T ss_dssp CHHHHHHHHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC-CE
T ss_pred ChHHHHHHHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCC-Cc
Confidence 6899999999999999999995 56555 789999999999999999999999954 223568889999987 79
Q ss_pred eEEeCCeeEEEEeccC
Q 031422 145 VFQTKFAKIGVGKGFY 160 (160)
Q Consensus 145 v~~~~~~rig~~ICy~ 160 (160)
+|+++++|+|++||||
T Consensus 156 v~~~~~~~ig~~ICyD 171 (291)
T 1f89_A 156 TIDTKYGKFGVGICYD 171 (291)
T ss_dssp EEEETTEEEEECCGGG
T ss_pred eEecCCeeEEEEEecc
Confidence 9999999999999998
No 4
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=1.1e-34 Score=214.47 Aligned_cols=148 Identities=30% Similarity=0.393 Sum_probs=128.6
Q ss_pred cccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHc
Q 031422 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (160)
Q Consensus 7 ~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (160)
+++|||++|+++..|.+.|++++.+++++|+++++|||||||++++||...+ +...+++. .+...+.|+++|+++
T Consensus 2 ~~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~----~~~~~~~~-~~~~~~~l~~~a~~~ 76 (276)
T 2w1v_A 2 STFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTY----FPDYAEKI-PGESTQKLSEVAKES 76 (276)
T ss_dssp CEEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTT----HHHHCBCS-SSHHHHHHHHHHHHH
T ss_pred CccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHH----HHHHhccC-CCHHHHHHHHHHHHc
Confidence 5699999999988899999999999999999999999999999999997543 34444443 368999999999999
Q ss_pred CcEEEecc-ccccCCeeeEEEEEEcCCCCEeEEeeeccCC-----CCCCcccceeecCCCCCceeEEeCCeeEEEEeccC
Q 031422 87 GVVMPVSF-FEEANNAHYNSIAIIDADGSDLGLYRKSHIP-----DGPGYQEKFYFNPGDTGFKVFQTKFAKIGVGKGFY 160 (160)
Q Consensus 87 ~i~i~~g~-~~~~~~~~~Ns~~~i~~~G~i~~~y~K~~l~-----~~~~~~e~~~~~~g~~~~~v~~~~~~rig~~ICy~ 160 (160)
++++++|. +++.++++||++++++++|+++.+|+|+||+ ....+.|..+|.+|+. +++|+++++|+|++||||
T Consensus 77 ~~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD 155 (276)
T 2w1v_A 77 SIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCKVGLGICYD 155 (276)
T ss_dssp TSEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCC-CCEEECSSCEEEECCGGG
T ss_pred CeEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCC-ceeEEeCCceEEEEEEec
Confidence 99999994 5556789999999999999999999999994 2223568889999987 799999999999999998
No 5
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=4.1e-35 Score=217.54 Aligned_cols=148 Identities=18% Similarity=0.219 Sum_probs=129.1
Q ss_pred CCcccEEEEEeCCCC-CCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHh-hhcccCCCChHHHHHHHH
Q 031422 5 KRREVVVSALQFACT-DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF-QRAKPYKDHPTILKMQEL 82 (160)
Q Consensus 5 ~~~~~~va~~Q~~~~-~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 82 (160)
++.+||||++|+++. .|++.|++++.+++++|+++++|||||||++++||...+ +. +.+++. .++.++.|+++
T Consensus 17 ~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d----~~~~~a~~~-~~~~~~~l~~~ 91 (283)
T 3hkx_A 17 RGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQ----ICAQVSAEQ-VDAARSRLRGI 91 (283)
T ss_dssp TTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHH----HHHHCCHHH-HHHHHHHHHHH
T ss_pred cCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHH----HHHHhcccc-CCHHHHHHHHH
Confidence 567799999999994 699999999999999999999999999999999997543 22 333322 24788999999
Q ss_pred HHHcCcEEEeccccccC-CeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeEEeCCeeEEEEeccC
Q 031422 83 AKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVGKGFY 160 (160)
Q Consensus 83 a~~~~i~i~~g~~~~~~-~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~~~~~~rig~~ICy~ 160 (160)
|+++++++++|++++.+ +++||++++++++|+++..|+|+||++. .|..+|.+|+..+++|+++++|+|++||||
T Consensus 92 a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~---~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D 167 (283)
T 3hkx_A 92 ARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGP---EEKAAFVPGEQPPPVLSWGGRQLSLLVCYD 167 (283)
T ss_dssp HHHTTSEEEECCBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH---HHHHHSCCCCSCCCEEEETTEEEEECCGGG
T ss_pred HHHhCCEEEEEEEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc---CchhhccCCCCCceEEEECCEEEEEEEecC
Confidence 99999999999998865 7899999999999999999999999752 488899999874579999999999999998
No 6
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.1e-34 Score=211.88 Aligned_cols=143 Identities=17% Similarity=0.203 Sum_probs=126.5
Q ss_pred cccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHH
Q 031422 7 REVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85 (160)
Q Consensus 7 ~~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 85 (160)
.++|||++|+++ ..+.+.|++++.+++++| +.++|||||||++++||... ....+++. .+...+.|+++|++
T Consensus 2 ~~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~-----~~~~a~~~-~~~~~~~l~~~a~~ 74 (266)
T 2e11_A 2 HDLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNE-----AIDKAEDM-DGPTVAWIRTQAAR 74 (266)
T ss_dssp CCEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSG-----GGGGCEET-TSHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChh-----HHHhhccC-CCHHHHHHHHHHHH
Confidence 468999999999 589999999999999999 88999999999999998532 22334433 46899999999999
Q ss_pred cCcEEEeccccccCCeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeEEeCCeeEEEEeccC
Q 031422 86 LGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVGKGFY 160 (160)
Q Consensus 86 ~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~~~~~~rig~~ICy~ 160 (160)
+++++++|++++.++++||++++++++|+++ +|+|+||++. +.|..+|.+|+. +.+|+++++|+|++||||
T Consensus 75 ~~~~iv~G~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~--~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD 145 (266)
T 2e11_A 75 LGAAITGSVQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF--GNEHLRYAAGRE-RLCVEWKGWRINPQVCYD 145 (266)
T ss_dssp HTSEEEEEEEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG--GTTTTTSBCCCS-CCCEEETTEEEEEEEGGG
T ss_pred hCCEEEEeeeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC--cChhhhccCCCC-ceEEEECCEEEEEEEEec
Confidence 9999999999888889999999999999999 9999999874 358889999987 799999999999999998
No 7
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=6.7e-34 Score=220.04 Aligned_cols=156 Identities=29% Similarity=0.424 Sum_probs=121.8
Q ss_pred CCcccEEEEEeCCCC--------CCHHHHHHHHHHHHHHHHhCCCcEEEecccccccccccc-chhhHhhhcccCCCChH
Q 031422 5 KRREVVVSALQFACT--------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPT 75 (160)
Q Consensus 5 ~~~~~~va~~Q~~~~--------~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 75 (160)
+.++||||++|+++. .+.+.|++++.+++++|+++++|||||||++++||.... ....+.+.+++...+..
T Consensus 69 ~~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~ 148 (405)
T 2vhh_A 69 KRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPT 148 (405)
T ss_dssp CCCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHH
T ss_pred CCCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHH
Confidence 446799999999873 357899999999999999999999999999999985321 11123345554434788
Q ss_pred HHHHHHHHHHcCcEEEecccccc---CCeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeEEeCCee
Q 031422 76 ILKMQELAKELGVVMPVSFFEEA---NNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAK 152 (160)
Q Consensus 76 ~~~l~~~a~~~~i~i~~g~~~~~---~~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~~~~~~r 152 (160)
++.|+++|++++++|++|++++. ++++||++++|+++|+++.+|+|+||++++.|.|..+|.+|+..+++|+++++|
T Consensus 149 ~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~~vf~~~~~r 228 (405)
T 2vhh_A 149 TKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGK 228 (405)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCCCEEEETTEE
T ss_pred HHHHHHHHHHCCEEEEEeceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCCeeEEECCEE
Confidence 99999999999999999999875 578999999999999999999999999877788999999998546899999999
Q ss_pred EEEEeccC
Q 031422 153 IGVGKGFY 160 (160)
Q Consensus 153 ig~~ICy~ 160 (160)
+|++||||
T Consensus 229 iG~~ICyD 236 (405)
T 2vhh_A 229 LAVNICYG 236 (405)
T ss_dssp EEECCGGG
T ss_pred EEEEEecc
Confidence 99999998
No 8
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=3.5e-33 Score=208.76 Aligned_cols=153 Identities=25% Similarity=0.385 Sum_probs=125.9
Q ss_pred cccEEEEEeCCCC---CCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccc---hhhHhhhcccCCCChHHHHHH
Q 031422 7 REVVVSALQFACT---DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ---REDFFQRAKPYKDHPTILKMQ 80 (160)
Q Consensus 7 ~~~~va~~Q~~~~---~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~l~ 80 (160)
++||||++|+++. .+.+.|++++.+++++|+++++|||||||++++||.+.++ ..++....+....+..++.|+
T Consensus 2 ~~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLF 81 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHH
T ss_pred ccEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHH
Confidence 4689999999984 6999999999999999999999999999999999965431 111111111111367889999
Q ss_pred HHHHHcCcEEEecccccc-CC---eeeEEEEEEcCCCCEeEEeeeccCCCCC------Cc--ccceeecCCC-CCceeEE
Q 031422 81 ELAKELGVVMPVSFFEEA-NN---AHYNSIAIIDADGSDLGLYRKSHIPDGP------GY--QEKFYFNPGD-TGFKVFQ 147 (160)
Q Consensus 81 ~~a~~~~i~i~~g~~~~~-~~---~~~Ns~~~i~~~G~i~~~y~K~~l~~~~------~~--~e~~~~~~g~-~~~~v~~ 147 (160)
++|+++++++++|++++. ++ ++||++++++++|+++.+|+|+||++.. .| .|..+|.+|+ . +.+|+
T Consensus 82 ~~a~~~~~~iv~G~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~-~~v~~ 160 (303)
T 1uf5_A 82 EKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLG-FPVYD 160 (303)
T ss_dssp HHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSC-SCEEE
T ss_pred HHHHHhCeEEEEeeeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCC-CceEe
Confidence 999999999999998764 45 8999999999999999999999997322 23 5888999998 5 79999
Q ss_pred eCCeeEEEEeccC
Q 031422 148 TKFAKIGVGKGFY 160 (160)
Q Consensus 148 ~~~~rig~~ICy~ 160 (160)
++++|+|++||||
T Consensus 161 ~~~~~ig~~ICyD 173 (303)
T 1uf5_A 161 VDAAKMGMFIAND 173 (303)
T ss_dssp ETTEEEEECCGGG
T ss_pred cCCceEEEEEecC
Confidence 9999999999998
No 9
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.3e-32 Score=222.99 Aligned_cols=148 Identities=15% Similarity=0.153 Sum_probs=129.5
Q ss_pred CcccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHH
Q 031422 6 RREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (160)
Q Consensus 6 ~~~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (160)
|+++|||++|+++ .+|++.|++++.+.+++|+++++|||||||++++||.+.+.. . .... .....+.|+++|+
T Consensus 3 M~~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~---~--~~~~-~~~~~~~l~~la~ 76 (634)
T 3ilv_A 3 LSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLF---L--TDWV-AETAIEYCFEIAA 76 (634)
T ss_dssp -CEEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGG---G--SHHH-HHHHHHHHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHh---h--Chhh-hHHHHHHHHHHHH
Confidence 4679999999999 489999999999999999999999999999999999877542 1 1111 1356788999999
Q ss_pred Hc-CcEEEeccccccCCeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCC---------------ceeEEe
Q 031422 85 EL-GVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG---------------FKVFQT 148 (160)
Q Consensus 85 ~~-~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~---------------~~v~~~ 148 (160)
+. ++++++|++++.++++||+++++ ++|+++..|+|+||++++.|.|.++|.+|+.. ..+|++
T Consensus 77 ~~~~i~ivvG~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g~~vf~~ 155 (634)
T 3ilv_A 77 SCTDITVSLGLPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNV 155 (634)
T ss_dssp TCTTSEEEEEEEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCCEEE
T ss_pred hCCCCEEEEeeeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCCCCcChhhhcCCCCccccceecccCcccccCCeEEEE
Confidence 86 99999999998889999999999 79999999999999999999999999999862 158999
Q ss_pred CCeeEEEEeccC
Q 031422 149 KFAKIGVGKGFY 160 (160)
Q Consensus 149 ~~~rig~~ICy~ 160 (160)
+++|+|+.||||
T Consensus 156 ~g~~iG~~IC~D 167 (634)
T 3ilv_A 156 KDARIGFEICED 167 (634)
T ss_dssp TTEEEEECCTTC
T ss_pred CCEEEEEEEecc
Confidence 999999999998
No 10
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=1.2e-32 Score=221.77 Aligned_cols=148 Identities=20% Similarity=0.268 Sum_probs=128.5
Q ss_pred CCcccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHH
Q 031422 5 KRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83 (160)
Q Consensus 5 ~~~~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 83 (160)
|.++||||++|+++ .+|++.|++++.+++++|+++++|||||||++++||++.+... .... .....+.|+++|
T Consensus 1 M~~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~----~~~~--~~~~~~~l~~la 74 (590)
T 3n05_A 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLAL----RSSF--VEASRTALRELA 74 (590)
T ss_dssp -CEEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGG----CHHH--HHHHHHHHHHHH
T ss_pred CCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhh----CHHH--HHHHHHHHHHHH
Confidence 55689999999999 5899999999999999999999999999999999999765421 1111 125667889999
Q ss_pred HHc--C----cEEEeccccccC----------CeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeEE
Q 031422 84 KEL--G----VVMPVSFFEEAN----------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQ 147 (160)
Q Consensus 84 ~~~--~----i~i~~g~~~~~~----------~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~~ 147 (160)
+++ + +++++|++++.+ +++||++++++ +|+++..|+|+||++++.|.|.++|.+|+. +.+|+
T Consensus 75 ~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~-~~v~~ 152 (590)
T 3n05_A 75 ARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDT-MPIVR 152 (590)
T ss_dssp HHHHHTTCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSSSCCHHHHCCCCCE-EEEEE
T ss_pred HhhhhccCCceEEEEeeEEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCCccCccccccCCCc-ceEEE
Confidence 888 6 999999987743 37999999997 899999999999999999999999999997 79999
Q ss_pred eCCeeEEEEeccC
Q 031422 148 TKFAKIGVGKGFY 160 (160)
Q Consensus 148 ~~~~rig~~ICy~ 160 (160)
++++|+|+.||||
T Consensus 153 ~~g~~iG~~IC~D 165 (590)
T 3n05_A 153 LHGVDIALAICED 165 (590)
T ss_dssp ETTEEEEEEEGGG
T ss_pred ECCEEEEEEeehh
Confidence 9999999999998
No 11
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=1.6e-32 Score=219.61 Aligned_cols=147 Identities=23% Similarity=0.288 Sum_probs=120.7
Q ss_pred cccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccch--hhHhhhcccCCCChHHHHHHHH-
Q 031422 7 REVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQR--EDFFQRAKPYKDHPTILKMQEL- 82 (160)
Q Consensus 7 ~~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~- 82 (160)
++||||++|+++ .+|++.|++++.+++++|+++|||||||||++++||++.+.. ..+.+.+. ..+..+.+.
T Consensus 5 MkmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~~~~~-----~~l~~la~~~ 79 (565)
T 4f4h_A 5 MKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYAASD-----AALAELAAQL 79 (565)
T ss_dssp -CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHHHHHH-----HHHHHHHHHH
T ss_pred cceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHHHHHH-----HHHHHHHHHh
Confidence 359999999998 589999999999999999999999999999999999988652 12222221 222333222
Q ss_pred HHHcCcEEEeccccccC----------------CeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeE
Q 031422 83 AKELGVVMPVSFFEEAN----------------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVF 146 (160)
Q Consensus 83 a~~~~i~i~~g~~~~~~----------------~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~ 146 (160)
++..++++++|++.+.+ +++||+++++. +|+++..|+|+|||+++.|.|.++|.+|+. +.+|
T Consensus 80 ~~~~~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hLp~~~~f~E~r~f~~G~~-~~v~ 157 (565)
T 4f4h_A 80 KPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDLPNTEVFDEKRYFATDAA-PYVF 157 (565)
T ss_dssp TTSTTCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSCCCSTTCCGGGTCCCCCC-CCEE
T ss_pred hhcCCcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeecCCCcccceeccccCCCc-ceeE
Confidence 23358999999886532 35999999996 699999999999999999999999999998 7999
Q ss_pred EeCCeeEEEEeccC
Q 031422 147 QTKFAKIGVGKGFY 160 (160)
Q Consensus 147 ~~~~~rig~~ICy~ 160 (160)
+++++|+|+.||||
T Consensus 158 ~~~g~~iGv~IC~D 171 (565)
T 4f4h_A 158 ELNGVKFGVVICED 171 (565)
T ss_dssp EETTEEEEECCGGG
T ss_pred EecCcEEEEEEeeh
Confidence 99999999999998
No 12
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=99.98 E-value=3.1e-32 Score=221.86 Aligned_cols=148 Identities=22% Similarity=0.229 Sum_probs=129.5
Q ss_pred cccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchh--hHhhhcccCCCChHHHHHHHHH
Q 031422 7 REVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQRE--DFFQRAKPYKDHPTILKMQELA 83 (160)
Q Consensus 7 ~~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~a 83 (160)
+.||||++|+++ .+|++.|++++.+.+++|+++|+|||||||++++||.+.+... ++.+.+ ...++.|.+++
T Consensus 11 g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~~-----~~~l~~l~~~a 85 (680)
T 3sdb_A 11 GFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAV-----EDALLDLVTES 85 (680)
T ss_dssp TEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHHH-----HHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHhh-----HHHHHHHHHHh
Confidence 469999999999 4999999999999999999999999999999999999876421 222222 36788999999
Q ss_pred HHcCcEEEeccccccCCeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCc---------------eeE--
Q 031422 84 KELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF---------------KVF-- 146 (160)
Q Consensus 84 ~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~---------------~v~-- 146 (160)
+++++++++|++++.++++||++++++ +|++++.|+|+||++++.|.|.++|.+|+... .+|
T Consensus 86 ~~~~i~ivvG~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~vf~~ 164 (680)
T 3sdb_A 86 ADLLPVLVVGAPLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAA 164 (680)
T ss_dssp TTCSSEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCEEEEE
T ss_pred hcCCcEEEEeceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCCCccChhhhcCCCCCCCceeeecCcccccCCceeEee
Confidence 999999999999988899999999998 89999999999999999999999999998621 146
Q ss_pred -EeCCeeEEEEeccC
Q 031422 147 -QTKFAKIGVGKGFY 160 (160)
Q Consensus 147 -~~~~~rig~~ICy~ 160 (160)
+++++|+|+.||||
T Consensus 165 ~~~~g~riGv~IC~D 179 (680)
T 3sdb_A 165 SDLPGFVLHVEIAED 179 (680)
T ss_dssp TTCTTCEEEEEEGGG
T ss_pred eccCCeEEEEEEecc
Confidence 68999999999998
No 13
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=99.97 E-value=8.5e-31 Score=198.81 Aligned_cols=145 Identities=17% Similarity=0.149 Sum_probs=122.2
Q ss_pred cccEEEEEeCCC-----CCCHHHHHHHHHHHHHHHHh--CCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHH
Q 031422 7 REVVVSALQFAC-----TDDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (160)
Q Consensus 7 ~~~~va~~Q~~~-----~~~~~~n~~~~~~~i~~a~~--~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (160)
.++|||++|+++ ..+++.|++++.+++++|++ .++|||||||++++||... ..++.+.+++. .+..++.|
T Consensus 11 ~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~--~~~~~~~a~~~-~~~~~~~l 87 (341)
T 2uxy_A 11 DTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYD--PAEMMETAVAI-PGEETEIF 87 (341)
T ss_dssp TEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCS--HHHHHHHCBCS-SSHHHHHH
T ss_pred CccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCC--HHHHHHHhccC-CCHHHHHH
Confidence 679999999985 25789999999999999987 7999999999999997532 22345556654 36899999
Q ss_pred HHHHHHcCcEEEeccc-cccC----CeeeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeEEe-CCeeE
Q 031422 80 QELAKELGVVMPVSFF-EEAN----NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKI 153 (160)
Q Consensus 80 ~~~a~~~~i~i~~g~~-~~~~----~~~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~~~-~~~ri 153 (160)
+++|+++++++++|++ ++.+ +++||++++++++|+++.+|+|+||+. |..+|.+|+. ..+|++ .|.|+
T Consensus 88 ~~~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~-----e~~~f~pG~~-~~v~~~~~G~ri 161 (341)
T 2uxy_A 88 SRACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC-----PIEGWYPGGQ-TYVSEGPKGMKI 161 (341)
T ss_dssp HHHHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCBCCCC-CCCEECGGGCEE
T ss_pred HHHHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC-----CccceeCCCC-ceEEECCCCCEE
Confidence 9999999999999988 7642 359999999999999999999999854 4567899987 689999 56799
Q ss_pred EEEeccC
Q 031422 154 GVGKGFY 160 (160)
Q Consensus 154 g~~ICy~ 160 (160)
|++||||
T Consensus 162 G~~ICyD 168 (341)
T 2uxy_A 162 SLIIXDD 168 (341)
T ss_dssp EEEEGGG
T ss_pred EEEEccC
Confidence 9999998
No 14
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.97 E-value=2.9e-31 Score=207.52 Aligned_cols=149 Identities=19% Similarity=0.287 Sum_probs=124.6
Q ss_pred cccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHc
Q 031422 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (160)
Q Consensus 7 ~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (160)
+++|||++|+++..|.+.|++++.+++++|+++|+|||||||++++++.... +....+++. .+...+.|+++|+++
T Consensus 13 ~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~---~~~~~a~~~-~~~~~~~l~~~A~~~ 88 (440)
T 1ems_A 13 GRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKN---EQIDLAMAT-DCEYMEKYRELARKH 88 (440)
T ss_dssp SEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHH---HHHHHHHHH-HHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchh---HHHHhhccC-CCHHHHHHHHHHHHc
Confidence 4799999999998899999999999999999999999999999998775321 122223222 257889999999999
Q ss_pred CcEEEecccc---c-cCCeeeEEEEEEcCCCCEeEEeeeccCCC-----CCCcccceeecCCCCCcee-EEeCCeeEEEE
Q 031422 87 GVVMPVSFFE---E-ANNAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKV-FQTKFAKIGVG 156 (160)
Q Consensus 87 ~i~i~~g~~~---~-~~~~~~Ns~~~i~~~G~i~~~y~K~~l~~-----~~~~~e~~~~~~g~~~~~v-~~~~~~rig~~ 156 (160)
++++++|++. + .++++||++++++++|+++.+|+|+||++ ...|.|..+|.+|+. ..+ |+++++|+|++
T Consensus 89 ~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~-~~~~~~~~~~~iG~~ 167 (440)
T 1ems_A 89 NIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTE-MIPPVDTPIGRLGLS 167 (440)
T ss_dssp TCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCS-CCCCEEETTEEECCC
T ss_pred CeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCC-CceeEECCCeeEEEE
Confidence 9999999654 4 35789999999999999999999999963 223568889999997 566 99999999999
Q ss_pred eccC
Q 031422 157 KGFY 160 (160)
Q Consensus 157 ICy~ 160 (160)
||||
T Consensus 168 ICyD 171 (440)
T 1ems_A 168 ICYD 171 (440)
T ss_dssp CGGG
T ss_pred Eecc
Confidence 9998
No 15
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=99.97 E-value=7.5e-31 Score=198.65 Aligned_cols=146 Identities=22% Similarity=0.188 Sum_probs=120.3
Q ss_pred cccEEEEEeCCC-----CCCHHHHHHHHHHHHHHHHh--CCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHH
Q 031422 7 REVVVSALQFAC-----TDDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (160)
Q Consensus 7 ~~~~va~~Q~~~-----~~~~~~n~~~~~~~i~~a~~--~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (160)
+++|||++|+++ ..+.+.|++++.+++++|++ .++|||||||++++||.... .++.+.+++. .+..++.|
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~--~~~~~~a~~~-~~~~~~~l 88 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAK--WLSEEFLLDV-PGKETELY 88 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTT--TTSGGGCBCS-SSHHHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCCh--hHHHHhhccC-CCHHHHHH
Confidence 469999999985 25789999999999999987 79999999999999976432 1233444443 36889999
Q ss_pred HHHHHHcCcEEEeccccccC-Ce--eeEEEEEEcCCCCEeEEeeeccCCCCCCcccceeecCCCCCceeEEe-CCeeEEE
Q 031422 80 QELAKELGVVMPVSFFEEAN-NA--HYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIGV 155 (160)
Q Consensus 80 ~~~a~~~~i~i~~g~~~~~~-~~--~~Ns~~~i~~~G~i~~~y~K~~l~~~~~~~e~~~~~~g~~~~~v~~~-~~~rig~ 155 (160)
+++|+++++++++|++++.+ ++ +||++++++++|+++..|+|+||+. |..+|.+|+...++|++ .|.|+|+
T Consensus 89 ~~~a~~~~i~iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~-----e~~~f~~G~~~~~v~~~~~g~~iG~ 163 (334)
T 2dyu_A 89 AKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN-----PIEPWYPGDLGMPVCEGPGGSKLAV 163 (334)
T ss_dssp HHHHHHHTCEEEEEEEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCCCCCSCCCCEECGGGCEEEE
T ss_pred HHHHHHhCeEEEEeeEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC-----CcccCcCCCCCceeEECCCCCEEEE
Confidence 99999999999999998753 44 9999999999999999999999864 44578999874459998 4679999
Q ss_pred EeccC
Q 031422 156 GKGFY 160 (160)
Q Consensus 156 ~ICy~ 160 (160)
+||||
T Consensus 164 ~ICyD 168 (334)
T 2dyu_A 164 CICHD 168 (334)
T ss_dssp EEGGG
T ss_pred EEECC
Confidence 99998
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=92.58 E-value=0.52 Score=34.13 Aligned_cols=70 Identities=20% Similarity=0.269 Sum_probs=43.8
Q ss_pred HHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-cCCee-eEEEEEE
Q 031422 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-ANNAH-YNSIAII 109 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~~~~~-~Ns~~~i 109 (160)
..+..+.+|+|+++.|=.+..++. ......++..|.+++++++...... .++.. +=.++++
T Consensus 173 ~~r~l~~~Ga~li~~ps~~~~~~~-----------------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii 235 (283)
T 3hkx_A 173 MVRAAAARGAQLVLVPTALAGDET-----------------SVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVV 235 (283)
T ss_dssp HHHHHHHTTCSEEEEECCCBSCCT-----------------HHHHTHHHHHHHHHTCEEEEECBEEEETTEEEECCCEEE
T ss_pred HHHHHHHCCCCEEEECCCCCCccc-----------------HHHHHHHHHHHHHhCCEEEEEccccCCCCeEEeeEEEEE
Confidence 445556789999999976432210 1223346677889999998743322 23322 3347889
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
+|+|+++..
T Consensus 236 ~p~G~vl~~ 244 (283)
T 3hkx_A 236 GPAGQPLGE 244 (283)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEe
Confidence 999998643
No 17
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=90.73 E-value=1 Score=32.52 Aligned_cols=69 Identities=13% Similarity=0.045 Sum_probs=43.1
Q ss_pred HHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEecccc-ccC-CeeeEEEEEEc
Q 031422 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EAN-NAHYNSIAIID 110 (160)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~-~~~~Ns~~~i~ 110 (160)
.+..+.+|+|+|+.|-.|.... . ......++..|.+++++++..... ..+ ..++=.+++++
T Consensus 175 ~r~~~~~Gadli~~psa~~~~~---------~--------~~~~~~~~arA~en~~~vv~~n~~G~~~~~~~~G~S~ii~ 237 (281)
T 3p8k_A 175 LRYPARSGAKIAFYVAQWPMSR---------L--------QHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVIN 237 (281)
T ss_dssp HHHHHHTTCCEEEEEECCBGGG---------H--------HHHHHHHHHHHHHHTSEEEEEECEEECSSCEEECCCEEEC
T ss_pred HHHHHHCCCCEEEECCCCCCcc---------H--------HHHHHHHHHHHHHcCCEEEEEccCcCCCCcEEeeeEEEEC
Confidence 3445568999999996443110 0 122334667788999999863332 223 33445578899
Q ss_pred CCCCEeEE
Q 031422 111 ADGSDLGL 118 (160)
Q Consensus 111 ~~G~i~~~ 118 (160)
|+|+++..
T Consensus 238 p~G~vl~~ 245 (281)
T 3p8k_A 238 PNGDLVGE 245 (281)
T ss_dssp TTSCEEEE
T ss_pred CCCCEEEe
Confidence 99998754
No 18
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=88.38 E-value=2.3 Score=31.56 Aligned_cols=70 Identities=19% Similarity=0.069 Sum_probs=43.8
Q ss_pred HHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-c-CCeeeEEEEEE
Q 031422 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-A-NNAHYNSIAII 109 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~-~~~~~Ns~~~i 109 (160)
..+.++.+|+|+|+.|-.+.... .......++..|.+++++++...... + +..++=.++++
T Consensus 174 ~~r~~~~~Gadlil~psaw~~~~-----------------~~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISGYSTQV-----------------NDQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQIC 236 (334)
T ss_dssp HHHHHHHTTCSEEEEEESSCTTS-----------------HHHHHHHHHHHHHHHTCEEEEEECSBSSSSCCCCCEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCCCCCc-----------------HHHHHHHHHHHHHhCCCEEEEECCCcCCCCeeeeeEEEEE
Confidence 44555567999999996542110 01233456777889999987743322 2 22344567888
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
+|+|+++..
T Consensus 237 dp~G~vla~ 245 (334)
T 2dyu_A 237 NFDGTTLVQ 245 (334)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEeee
Confidence 999998753
No 19
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=88.34 E-value=2 Score=32.01 Aligned_cols=70 Identities=20% Similarity=0.208 Sum_probs=43.9
Q ss_pred HHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-cC-CeeeEEEEEE
Q 031422 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-AN-NAHYNSIAII 109 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~~-~~~~Ns~~~i 109 (160)
..+.++.+|+|+|+.|-.|.. .. .......++..|.+++++++...... ++ ..++=.++++
T Consensus 174 ~~r~l~~~Gadlll~psa~~~--~~---------------~~~~~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQGYMY--PA---------------KDQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAII 236 (341)
T ss_dssp HHHHHHHTTCSEEEEEECCBT--TC---------------HHHHHHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEE
T ss_pred HHHHHHHcCCCEEEEcCCCCC--Cc---------------HHHHHHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEE
Confidence 445556689999999965421 10 01334456777889999988743322 22 2344467888
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
+++|+++..
T Consensus 237 dp~G~vla~ 245 (341)
T 2uxy_A 237 GFDGRTLGE 245 (341)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEE
Confidence 999998753
No 20
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=87.67 E-value=4.1 Score=29.58 Aligned_cols=73 Identities=10% Similarity=0.083 Sum_probs=47.6
Q ss_pred cEEEEEeCCCC------CCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHH
Q 031422 9 VVVSALQFACT------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (160)
Q Consensus 9 ~~va~~Q~~~~------~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (160)
+++..+..... ...+...+.+.+.++.|+.-|++.|++|-. +.......+... ...++.+.+.
T Consensus 90 L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~-----~~~~~~~~~~~~------~~~l~~l~~~ 158 (305)
T 3obe_A 90 LRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL-----PRIENEDDAKVV------SEIFNRAGEI 158 (305)
T ss_dssp CEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC-----CCCSSHHHHHHH------HHHHHHHHHH
T ss_pred CeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC-----CCCCCHHHHHHH------HHHHHHHHHH
Confidence 56666655431 234667788999999999999999999721 111112223222 1566778888
Q ss_pred HHHcCcEEEe
Q 031422 83 AKELGVVMPV 92 (160)
Q Consensus 83 a~~~~i~i~~ 92 (160)
|+++|+.+.+
T Consensus 159 a~~~Gv~l~l 168 (305)
T 3obe_A 159 TKKAGILWGY 168 (305)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 8999998876
No 21
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=87.46 E-value=0.46 Score=32.89 Aligned_cols=42 Identities=17% Similarity=0.362 Sum_probs=25.7
Q ss_pred CcccEEEEEeCCCC----CCHHHHHHHHHHHHHHHHhCCCcEEEecccc
Q 031422 6 RREVVVSALQFACT----DDVSTNLATAERLVRAAHGKGANIILIQELF 50 (160)
Q Consensus 6 ~~~~~va~~Q~~~~----~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~ 50 (160)
.+.+++-++..|+. .+.....+.+.+.|+ +.++|+|+|.|..
T Consensus 9 ~~~~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv~ 54 (256)
T 4fva_A 9 LKGFEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEVV 54 (256)
T ss_dssp CTTCEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEEC
T ss_pred CCCCEEEEEEEecCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEecC
Confidence 34455666666662 234444445555554 4589999999963
No 22
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=87.15 E-value=1.7 Score=31.29 Aligned_cols=70 Identities=14% Similarity=0.062 Sum_probs=42.4
Q ss_pred HHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc---cCCeeeEEEEEE
Q 031422 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE---ANNAHYNSIAII 109 (160)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~---~~~~~~Ns~~~i 109 (160)
.+..+.+|+|+++.|-.+.... . . ......++..|.+++++++...... .+..++-.++++
T Consensus 178 ~r~l~~~Ga~ll~~ps~~~~~~---------~---~----~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii 241 (291)
T 1f89_A 178 AMLSARKGAFAMIYPSAFNTVT---------G---P----LHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVV 241 (291)
T ss_dssp HHHHHHTTEEEEEEECCCBTTH---------H---H----HHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEE
T ss_pred HHHHHhhCCCEEEECCcCCCCC---------c---H----HHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEE
Confidence 4445567999999995322100 0 0 1233456677889999987743322 223345567889
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
+|+|+++..
T Consensus 242 ~p~G~vl~~ 250 (291)
T 1f89_A 242 DPRGKIVAE 250 (291)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEe
Confidence 999998753
No 23
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=86.49 E-value=3 Score=29.58 Aligned_cols=67 Identities=16% Similarity=-0.033 Sum_probs=42.6
Q ss_pred HHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-cCCe-eeEEEEEE
Q 031422 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-ANNA-HYNSIAII 109 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~~~~-~~Ns~~~i 109 (160)
..+..+.+|+|+++.|=.+... .....++..|.+++++++...... +++. .+=.++++
T Consensus 154 ~~r~~~~~ga~li~~ps~~~~~--------------------~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii 213 (262)
T 3ivz_A 154 SARTLALKGADVIAHPANLVMP--------------------YAPRAMPIRALENKVYTVTADRVGEERGLKFIGKSLIA 213 (262)
T ss_dssp HHHHHHHTTCSEEEEEECCCSS--------------------CHHHHHHHHHHHHTCEEEEEECCSEETTEECCCCCEEE
T ss_pred HHHHHHHCCCCEEEEcCCCCch--------------------HHHHHHHHHHHhcCcEEEEECCCCcCCCceEeeeEEEE
Confidence 3445567899999999764321 122346677889999987743322 2222 23447888
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
+|+|+++..
T Consensus 214 ~p~G~il~~ 222 (262)
T 3ivz_A 214 SPKAEVLSM 222 (262)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEeec
Confidence 999988643
No 24
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=86.01 E-value=2.1 Score=34.36 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=46.1
Q ss_pred HHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccc-cccCC-eeeEEEEEE
Q 031422 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN-AHYNSIAII 109 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~-~~~~~-~~~Ns~~~i 109 (160)
..+.++.+|+++++.|=.+..... . .......++..|.+++++++.... -.+++ .++-.++++
T Consensus 177 ~~r~la~~GA~ii~~psAs~~~~g----k-----------~~~r~~ll~arA~e~~~~vvy~N~vG~~~~~~f~G~S~ii 241 (565)
T 4f4h_A 177 AAQLAKAAGAQVLIVPNGSPYHMN----K-----------DAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 241 (565)
T ss_dssp HHHHHHHTTCSEEEEEECCBCCTT----H-----------HHHHHHHHHHHHHHHCCCEEEEECEEEETTEEEEBCCEEE
T ss_pred hhHHHHhCCCeeeecccccccccC----c-----------HHHHHHHHHHHHHHhCCcEEEeeeecCCCCeEEECCccee
Confidence 344556789999999975432110 0 012334578889999999877433 22333 455778999
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
+++|+++..
T Consensus 242 dp~G~vla~ 250 (565)
T 4f4h_A 242 DGAGELVAK 250 (565)
T ss_dssp CTTSCEEEE
T ss_pred cCCCcEEEE
Confidence 999998643
No 25
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=85.10 E-value=2 Score=30.77 Aligned_cols=69 Identities=12% Similarity=0.053 Sum_probs=41.9
Q ss_pred HHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-c--CCeeeEEEEEE
Q 031422 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-A--NNAHYNSIAII 109 (160)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~--~~~~~Ns~~~i 109 (160)
.+..+.+|+|+++.|-.+..... . ......++..|.+++++++...... + +..++=.++++
T Consensus 162 ~r~~~~~ga~ll~~ps~~~~~~~----~------------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii 225 (276)
T 2w1v_A 162 AQIYAQRGCQLLVYPGAFNLTTG----P------------AHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVV 225 (276)
T ss_dssp HHHHHHTTEEEEEEECCCCTTHH----H------------HHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEE
T ss_pred HHHHHHcCCCEEEECCcCCCcCC----H------------HHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEE
Confidence 44555679999999964321000 0 1223346677889999988743322 1 22344567888
Q ss_pred cCCCCEeE
Q 031422 110 DADGSDLG 117 (160)
Q Consensus 110 ~~~G~i~~ 117 (160)
+|+|+++.
T Consensus 226 ~p~G~v~~ 233 (276)
T 2w1v_A 226 DPWGQVLT 233 (276)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEeE
Confidence 99999875
No 26
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=84.13 E-value=4.5 Score=28.67 Aligned_cols=62 Identities=13% Similarity=-0.088 Sum_probs=39.2
Q ss_pred CCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEecccc-ccCC--eeeEEEEEEcCCCCEe
Q 031422 40 GANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANN--AHYNSIAIIDADGSDL 116 (160)
Q Consensus 40 ~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~~--~~~Ns~~~i~~~G~i~ 116 (160)
|+|+++.|-.|.... . ......++..|.+++++++..... .+++ ...=.+++++|+|+++
T Consensus 165 ga~~i~~~s~w~~~~-----~------------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v~ 227 (266)
T 2e11_A 165 DFDLQLFVANWPSAR-----A------------YAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQ 227 (266)
T ss_dssp SCSEEEEEECCCGGG-----H------------HHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCEE
T ss_pred CCcEEEEeCCCCCCc-----h------------HHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCcee
Confidence 899999887643210 0 123344667789999999874322 2222 3445678999999987
Q ss_pred EE
Q 031422 117 GL 118 (160)
Q Consensus 117 ~~ 118 (160)
..
T Consensus 228 ~~ 229 (266)
T 2e11_A 228 VE 229 (266)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 27
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=80.73 E-value=11 Score=30.32 Aligned_cols=72 Identities=21% Similarity=0.260 Sum_probs=45.3
Q ss_pred HHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEecccc-ccCCeee-EEEEEE
Q 031422 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANNAHY-NSIAII 109 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~-~~~~~~~-Ns~~~i 109 (160)
..+.++.+|+|+++.|=.+. +... . .......++..|.+++++++..... ..++..| =.++++
T Consensus 172 ~~~~la~~Ga~ii~~psa~p--~~~g----------k---~~~~~~l~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~ii 236 (590)
T 3n05_A 172 RVPAARSAGAGLLLSVNASP--YERD----------K---DDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVV 236 (590)
T ss_dssp HHHHHHHTTCSEEEEEECCB--CCCC----------S---SCHHHHHHHHHHHHHTSEEEEEECEEEETTEEEEBCCEEE
T ss_pred HHHHHHHcCCCEEEEecCCc--cccC----------c---HHHHHHHHHHHHHHhCCEEEEEecccCCCCeEEeCcEEEE
Confidence 34455668999999986532 1100 0 1244566788899999999874332 2334444 457888
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
+++|+++..
T Consensus 237 dp~G~vla~ 245 (590)
T 3n05_A 237 DRDGEVVAR 245 (590)
T ss_dssp CTTSCEEEE
T ss_pred CCCCcEEEE
Confidence 999998643
No 28
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=78.91 E-value=12 Score=27.33 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccccc--ccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYY--FCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (160)
..|++.+.+.++.+.+.|.+++=+.=-+++-| +...|. +... .....+.++++++++++.+++-
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~--~~~~-----~~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYD--WEGA-----YEEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSC--HHHH-----HHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCC--cCCC-----CHHHHHHHHHHHHHcCCeEEEe
Confidence 78999999999999999999887633222211 111221 1111 1245677889999999977664
No 29
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=78.84 E-value=11 Score=26.83 Aligned_cols=62 Identities=16% Similarity=0.276 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|+++ ... .+......+.+... .+.++.+.+.|+++++.+.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~-~~~-~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~l 165 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLA-GYD-VYYQEANNETRRRF------RDGLKESVEMASRAQVTLAM 165 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEC-CCS-CSSSCCCHHHHHHH------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEC-CCC-CCcCcCHHHHHHHH------HHHHHHHHHHHHHhCCEEEE
Confidence 4567888999999999999999987 111 11111111112221 14566777888888988876
No 30
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=78.59 E-value=9.9 Score=26.94 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccccccccc-chhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|+++=.+.. +.... ...+..+.. ...++.+.+.++++++.+.+
T Consensus 100 ~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~-~~~~~p~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 100 KECMDTMKEIIAAAGELGSTGVIIVPAFNG-QVPALPHTMETRDFL-----CEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSCCTT-CCSBCCSSHHHHHHH-----HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCcCC-cCCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 456788899999999999999887522111 10000 111111111 15567778888899988776
No 31
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=78.30 E-value=4.8 Score=30.92 Aligned_cols=71 Identities=13% Similarity=0.019 Sum_probs=42.8
Q ss_pred HHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-c-C-CeeeEEEEE
Q 031422 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-A-N-NAHYNSIAI 108 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~-~-~~~~Ns~~~ 108 (160)
..+..+.+|+|+++.|-.+... .. . ......++..|.+++++++...... + + ...+=.+++
T Consensus 177 ~~r~l~~~Ga~il~~psa~~~~---------~~---~----~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~i 240 (440)
T 1ems_A 177 LSLWNRKRGAQLLSFPSAFTLN---------TG---L----AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMV 240 (440)
T ss_dssp HHHHHHHTTCSEEECCBCCCHH---------HH---H----HHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEE
T ss_pred HHHHHHHcCCcEEEECCcCCCC---------Cc---H----HHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEE
Confidence 3444556799999998643210 00 0 1223346677899999998743332 1 2 233345788
Q ss_pred EcCCCCEeEE
Q 031422 109 IDADGSDLGL 118 (160)
Q Consensus 109 i~~~G~i~~~ 118 (160)
++|+|+++..
T Consensus 241 i~P~G~vla~ 250 (440)
T 1ems_A 241 VDPWGAVVAQ 250 (440)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCeecc
Confidence 9999988754
No 32
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=78.24 E-value=15 Score=25.75 Aligned_cols=61 Identities=5% Similarity=-0.148 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccccccccc-cchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQ-AQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.+..++.+.+.++.|+.-|++.|++.= |.+.. +..+.+... .+.++.+.+.++++|+.+.+
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~~----g~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAMS----GITEGLDRKACEETF------IENFRYAADKLAPHGITVLV 149 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCB----CBCTTSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcc----CCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 466788899999999999999988742 21111 111112222 15567778888889998876
No 33
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=76.36 E-value=13 Score=26.24 Aligned_cols=61 Identities=11% Similarity=0.111 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.+..++.+.+.++.|+.-|++.|++.= |+.+......+.... ..++.+.+.++++++.+.+
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~~----G~~~~~~~~~~~~~~------~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLHI----GFVPESSSPDYSELV------RVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECC----CCCCCTTSHHHHHHH------HHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC----CCCcccchHHHHHHH------HHHHHHHHHHHHcCCEEEE
Confidence 466788999999999999999988742 322221111122221 4566777788888988876
No 34
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=75.17 E-value=3.7 Score=31.40 Aligned_cols=67 Identities=15% Similarity=0.021 Sum_probs=39.4
Q ss_pred HHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccccC--------------
Q 031422 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-------------- 99 (160)
Q Consensus 34 ~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~~~-------------- 99 (160)
+..+.+|+|+|+.|=.+..... . ..+...++..|.+++++++........
T Consensus 244 r~la~~GAdill~psa~~~~~~------------~----~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~~~ 307 (405)
T 2vhh_A 244 MMFGLNGAEIVFNPSATIGRLS------------E----PLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKA 307 (405)
T ss_dssp HHHHHTTCSEEEEEECCBCTTT------------H----HHHHHHHHHHHHHHTSEEEEEECEECCCCC-----------
T ss_pred HHHHHcCCCEEEEcccCCCCCC------------H----HHHHHHHHHHHHHcCceEEEeccccccccccccccccCccc
Confidence 3445679999999986532110 0 122234667788999998764321110
Q ss_pred ----CeeeEEEEEEcCCCCEe
Q 031422 100 ----NAHYNSIAIIDADGSDL 116 (160)
Q Consensus 100 ----~~~~Ns~~~i~~~G~i~ 116 (160)
..++=.+++++|+|+++
T Consensus 308 ~~~~~~f~G~S~IidP~G~vl 328 (405)
T 2vhh_A 308 HKEFGPFYGSSYVAAPDGSRT 328 (405)
T ss_dssp ------EECCCCCBCTTSCBC
T ss_pred cccCceeccccceECCCCCEe
Confidence 12344577888999875
No 35
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=73.55 E-value=3 Score=28.53 Aligned_cols=37 Identities=8% Similarity=0.169 Sum_probs=22.2
Q ss_pred EEEEEeCCCC----CCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 031422 10 VVSALQFACT----DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 10 ~va~~Q~~~~----~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
++.++..|+. .+.....+.+.+.|+ +.++|+|+|.|.
T Consensus 9 ~l~v~swNi~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 49 (256)
T 4gz1_A 9 TISFITWNIDGLDGCNLPERARGVCSCLA---LYSPDVVFLQEV 49 (256)
T ss_dssp EEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred cEEEEEEEcCCCcCcCHHHHHHHHHHHHH---HcCCCEEEEEcC
Confidence 4445555552 234444455555554 458999999995
No 36
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=72.02 E-value=6 Score=26.80 Aligned_cols=42 Identities=10% Similarity=0.162 Sum_probs=22.6
Q ss_pred cccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecccccc
Q 031422 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEG 52 (160)
Q Consensus 7 ~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~ 52 (160)
.++||.....+-... ....+.+.+.++ +.++|+|++.|....
T Consensus 6 ~~lri~t~Nv~g~~~-~~~~~~~~~~i~---~~~~DIv~LQE~~~~ 47 (238)
T 1vyb_A 6 SHITILTLNINGLNS-AIKRHRLASWIK---SQDPSVCCIQETHLT 47 (238)
T ss_dssp CCEEEEEEECSCCCS-HHHHHHHHHHHH---HHCCSEEEEECCCCC
T ss_pred CcceEEEEecccCCc-hhhHHHHHHHHH---HcCCCEEEEecccCC
Confidence 345554444432221 222234444444 458999999998543
No 37
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=71.99 E-value=2.4 Score=28.67 Aligned_cols=39 Identities=10% Similarity=0.141 Sum_probs=22.6
Q ss_pred ccEEEEEeCCC--CCCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 031422 8 EVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 8 ~~~va~~Q~~~--~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
+|||.....+- ..+.....+.+.+.|+ +.++|+|+|.|.
T Consensus 3 ~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 43 (250)
T 4f1h_A 3 KLSIISWNVDGLDTLNLADRARGLCSYLA---LYTPDVVFLQEL 43 (250)
T ss_dssp CEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred eEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEeC
Confidence 45555444332 1234444555555554 458999999995
No 38
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=70.66 E-value=32 Score=26.08 Aligned_cols=41 Identities=5% Similarity=0.123 Sum_probs=30.9
Q ss_pred cEEEEEeCCC--------CCCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 031422 9 VVVSALQFAC--------TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 9 ~~va~~Q~~~--------~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
+++.+++... ..+.+..++.+++.++.|++.|+++|+...+
T Consensus 78 L~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf~ 126 (386)
T 3bdk_A 78 LEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFM 126 (386)
T ss_dssp CEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 6777665322 2346788899999999999999999997443
No 39
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=70.65 E-value=20 Score=27.35 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEe----ccccccccc--cc--c-c---hhhHhhhcccCCCChHHHHHHHHHHHcCc
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILI----QELFEGYYF--CQ--A-Q---REDFFQRAKPYKDHPTILKMQELAKELGV 88 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~----PE~~~~g~~--~~--~-~---~~~~~~~~~~~~~~~~~~~l~~~a~~~~i 88 (160)
+-...++...+.++.|++.|||.|=| |+..++.+. .. . + ..++++..+ ...+.+..|.+.+++.|+
T Consensus 38 NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~--l~~e~~~~L~~~~~~~Gi 115 (385)
T 1vli_A 38 NHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSME--MPAEWILPLLDYCREKQV 115 (385)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBS--SCGGGHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcC--CCHHHHHHHHHHHHHcCC
Confidence 45566788999999999999999987 555434332 10 0 1 112222222 135888999999999999
Q ss_pred EEEeccc
Q 031422 89 VMPVSFF 95 (160)
Q Consensus 89 ~i~~g~~ 95 (160)
.++...+
T Consensus 116 ~~~stpf 122 (385)
T 1vli_A 116 IFLSTVC 122 (385)
T ss_dssp EEECBCC
T ss_pred cEEEccC
Confidence 9987644
No 40
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=70.18 E-value=24 Score=24.35 Aligned_cols=61 Identities=8% Similarity=-0.111 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccc--hhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.+..++.+.+.++.|++-|++.|++. +|...... .+.+... ...++.+.+.++++++.+.+
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVM----AGVVPAGEDAERYRAVF------IDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCTTSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 46678899999999999999999873 23221111 1111111 14556677778888888876
No 41
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=69.90 E-value=23 Score=25.45 Aligned_cols=59 Identities=5% Similarity=0.018 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcE--EEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV--MPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~--i~~ 92 (160)
+...+.+.+.++.|+.-|++.|+.|-. + .......+... -+.++.+.+.|+++|+. +.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~--~---~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 104 PKIMEYWKATAADHAKLGCKYLIQPMM--P---TITTHDEAKLV------CDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSC--C---CCCSHHHHHHH------HHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCC--C---CCCCHHHHHHH------HHHHHHHHHHHHHCCCcceEEE
Confidence 667888999999999999999999732 1 11111222222 25667788889999998 765
No 42
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=69.00 E-value=11 Score=25.98 Aligned_cols=41 Identities=12% Similarity=0.221 Sum_probs=25.2
Q ss_pred ccEEEEEeCCCC--CCHHHHHHHHHHHHHHHHhCCCcEEEeccccc
Q 031422 8 EVVVSALQFACT--DDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (160)
Q Consensus 8 ~~~va~~Q~~~~--~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~ 51 (160)
+|||+.....-. .+....++++.+.++. .++|+|+|.|...
T Consensus 3 ~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~~---~~~DIi~LQEv~~ 45 (266)
T 3teb_A 3 AMKILTVNVHAWLEENQMEKIDILARTIAE---KQYDVIAMQEVNQ 45 (266)
T ss_dssp CEEEEEEECCTTCSTTHHHHHHHHHHHHHH---HTCSEEEEEEEEE
T ss_pred ceEEEEEecccccCcchhHHHHHHHHHHHh---cCCCEEEEEEccc
Confidence 456655444322 3445556666666654 4899999999744
No 43
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=68.74 E-value=17 Score=25.24 Aligned_cols=60 Identities=10% Similarity=0.127 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccccccc--hhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+...+.+.+.++.|+.-|++.|++. +|...... .+.+... .+.++.+.+.++++|+.+.+
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~l 141 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAV----PLVTEQKIVKEEIKKSS------VDVLTELSDIAEPYGVKIAL 141 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEE----CCBCSSCCCHHHHHHHH------HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe----cCCCCCCCCHHHHHHHH------HHHHHHHHHHHHhcCCEEEE
Confidence 4567888999999999999998872 22221111 1112221 14556677777888888766
No 44
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=67.72 E-value=29 Score=24.35 Aligned_cols=74 Identities=14% Similarity=0.021 Sum_probs=45.8
Q ss_pred cEEEEEeCCC----CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccccccccc-c-hhhHhhhcccCCCChHHHHHHHH
Q 031422 9 VVVSALQFAC----TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-Q-REDFFQRAKPYKDHPTILKMQEL 82 (160)
Q Consensus 9 ~~va~~Q~~~----~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~ 82 (160)
+++..+.... ....+...+.+.+.++.|+.-|++.|++. +|..... . ...+... ...++.+.+.
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~ 131 (286)
T 3dx5_A 62 LEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTF----AGQKGSADFSQQERQEY------VNRIRMICEL 131 (286)
T ss_dssp CCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEEC----SCSSCGGGSCHHHHHHH------HHHHHHHHHH
T ss_pred CeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEc----CCCCCcccCcHHHHHHH------HHHHHHHHHH
Confidence 4555554322 34567788999999999999999998652 2221111 1 1112221 1556777888
Q ss_pred HHHcCcEEEe
Q 031422 83 AKELGVVMPV 92 (160)
Q Consensus 83 a~~~~i~i~~ 92 (160)
|+++|+.+.+
T Consensus 132 a~~~Gv~l~l 141 (286)
T 3dx5_A 132 FAQHNMYVLL 141 (286)
T ss_dssp HHHTTCEEEE
T ss_pred HHHhCCEEEE
Confidence 8899998876
No 45
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=67.06 E-value=18 Score=25.96 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=27.2
Q ss_pred HHHHHHHHcCcEEEecccc-ccC-CeeeEEEEEEcCCCCEeEE
Q 031422 78 KMQELAKELGVVMPVSFFE-EAN-NAHYNSIAIIDADGSDLGL 118 (160)
Q Consensus 78 ~l~~~a~~~~i~i~~g~~~-~~~-~~~~Ns~~~i~~~G~i~~~ 118 (160)
.++..|.+++++++..... .++ ..++-.+.+++|+|+++..
T Consensus 218 ~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~~ 260 (303)
T 1uf5_A 218 SMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVAL 260 (303)
T ss_dssp HHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEECTTSCEEEE
T ss_pred HHHhhhhcCCcEEEEECcccccCCccccceeEEECCCCCEecc
Confidence 4567788999999874332 222 2344457888999998753
No 46
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=66.36 E-value=21 Score=24.82 Aligned_cols=63 Identities=14% Similarity=0.034 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|+++=...+.. ..+..+.+... -..++.+.+.++++++.+.+
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~-~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVAGGLPGG-SKNIDAARRMV------VEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECBCCCTT-CCCHHHHHHHH------HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCC-CcCHHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 45678899999999999999988763222100 01111112221 15567778888888888876
No 47
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=65.55 E-value=20 Score=24.78 Aligned_cols=60 Identities=15% Similarity=0.028 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccccccc---hhh-HhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ---RED-FFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~---~~~-~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|++.= |+..... .++ +.... ..++.+.+.++++++.+.+
T Consensus 72 ~~~~~~~~~~i~~A~~lGa~~v~~~~----g~~~~~~~~~~~~~~~~~~------~~l~~l~~~a~~~gv~l~l 135 (254)
T 3ayv_A 72 GLTLRRLLFGLDRAAELGADRAVFHS----GIPHGRTPEEALERALPLA------EALGLVVRRARTLGVRLLL 135 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEC----CCCTTCCHHHHHHTHHHHH------HHTHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECC----CCCcccccccHHHHHHHHH------HHHHHHHHHHhhcCCEEEE
Confidence 45678889999999999999987752 2221111 011 11111 3445667777888888876
No 48
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=64.73 E-value=5.8 Score=29.69 Aligned_cols=40 Identities=18% Similarity=0.380 Sum_probs=24.3
Q ss_pred cccEEEEEeCCCC----CCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 031422 7 REVVVSALQFACT----DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 7 ~~~~va~~Q~~~~----~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
...++-++-.|+. .+.....+.+.+.| .+.++|+|+|.|.
T Consensus 116 ~~~~lkVlSWNI~Gl~~~~~~~R~~~I~~~I---~~~~PDIV~LQEv 159 (362)
T 4gew_A 116 KGFEVSVMSWNIDGLDGRSLLTRMKAVAHIV---KNVNPDILFLQEV 159 (362)
T ss_dssp TTCEEEEEEEECCTTCCTTHHHHHHHHHHHH---HHHCCSEEEEEEE
T ss_pred CCCeEEEEEEEeCCCCCcCHHHHHHHHHHHH---HHcCCCEEEEEcC
Confidence 3455666666662 22333344444444 4558999999996
No 49
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=64.42 E-value=7.3 Score=26.89 Aligned_cols=39 Identities=28% Similarity=0.200 Sum_probs=23.1
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecccccc
Q 031422 10 VVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEG 52 (160)
Q Consensus 10 ~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~ 52 (160)
.+-++|+|+.... ...+++ ++...+.++|+|++.|....
T Consensus 19 ~lri~s~Nv~~~~-~~~~~l---~~~i~~~~~DIv~lQE~~~~ 57 (245)
T 1wdu_A 19 PYRVLQANLQRKK-LATAEL---AIEAATRKAAIALIQEPYVG 57 (245)
T ss_dssp CEEEEEEECTTCH-HHHHHH---HHHHHHHTCSEEEEESCCC-
T ss_pred ceeeeeeeccccH-HHHHHH---HHHHhhcCCCEEEEEccccc
Confidence 3556677774322 223334 44444568999999998653
No 50
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=61.96 E-value=39 Score=23.80 Aligned_cols=64 Identities=9% Similarity=0.052 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccc--ccccccccc--------chhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQEL--FEGYYFCQA--------QREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~--~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+...+.+.+.++.|+.-|++.|+++.. +..|..... ....+... ...++.+.+.|+++++.+.+
T Consensus 86 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 86 EKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEV------CKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHH------HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 456778889999999999999888652 111221010 11111111 15566778888889998876
No 51
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}
Probab=61.10 E-value=9.3 Score=26.67 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=21.4
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecccc
Q 031422 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELF 50 (160)
Q Consensus 11 va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~ 50 (160)
+-++|.|+.+ +....+++.+.+ .+.++|+|++.|..
T Consensus 8 mki~s~Nvn~-~r~~~~~l~~~l---~~~~~DIl~LQEt~ 43 (240)
T 2ei9_A 8 LRIGQINLGG-AEDATRELPSIA---RDLGLDIVLVQEQY 43 (240)
T ss_dssp EEEEEEECTT-CHHHHHTHHHHH---HHHTCSEEEEESCC
T ss_pred ceEEEEecCc-cHHHHHHHHHHH---HHcCCCEEEeecce
Confidence 4455666633 222334444444 45689999999984
No 52
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=59.35 E-value=14 Score=27.22 Aligned_cols=24 Identities=21% Similarity=0.176 Sum_probs=19.9
Q ss_pred eeeEEEEEEcCCCCEeEEeeeccC
Q 031422 101 AHYNSIAIIDADGSDLGLYRKSHI 124 (160)
Q Consensus 101 ~~~Ns~~~i~~~G~i~~~y~K~~l 124 (160)
..+-+.++||++|.|...|+++.+
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESCCS
T ss_pred cCccEEEEECCCCEEEEEEeCCCc
Confidence 345578999999999999998865
No 53
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=59.22 E-value=45 Score=23.73 Aligned_cols=64 Identities=16% Similarity=0.045 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccccccc-c--cchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFC-Q--AQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~-~--~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|+.|=....|... . .....+... .+.++.+.+.++++++.+.+
T Consensus 103 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~l 169 (309)
T 2hk0_A 103 AAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARG------VEGINGIADFANDLGINLCI 169 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHH------HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 4567889999999999999999854211112211 1 111112221 15567777888889998876
No 54
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=59.17 E-value=31 Score=23.99 Aligned_cols=62 Identities=13% Similarity=-0.019 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.+..++.+++.++.|+.-|++.|+++ ..++.. ......+... -..++.+.+.|+++++.+.+
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~--~~p~~~-~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~l 140 (281)
T 3u0h_A 79 FLRELSLLPDRARLCARLGARSVTAF--LWPSMD-EEPVRYISQL------ARRIRQVAVELLPLGMRVGL 140 (281)
T ss_dssp HHHHHHTHHHHHHHHHHTTCCEEEEE--CCSEES-SCHHHHHHHH------HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEe--ecCCCC-CcchhhHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 34556778889999999999999853 111111 0001111111 14556777778888998876
No 55
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=58.99 E-value=7.7 Score=27.71 Aligned_cols=41 Identities=15% Similarity=0.252 Sum_probs=27.2
Q ss_pred CCcccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEe-cccc
Q 031422 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILI-QELF 50 (160)
Q Consensus 5 ~~~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~-PE~~ 50 (160)
-+..+||+++- |+-.|+..+.+.++.+...++|.|++ .-+.
T Consensus 8 ~~~~~~i~~iS-----DiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv 49 (270)
T 3qfm_A 8 HMDMTKIALLS-----DIHGNTTALEAVLADARQLGVDEYWLLGDIL 49 (270)
T ss_dssp ---CEEEEEEC-----CCTTCHHHHHHHHHHHHHTTCCEEEECSCCS
T ss_pred cccccEEEEEe-----cCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 34567888774 66667777888888877778997665 4443
No 56
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=58.76 E-value=22 Score=25.33 Aligned_cols=23 Identities=17% Similarity=0.125 Sum_probs=15.6
Q ss_pred HHHHHHHHHHhCCCcEEEecccc
Q 031422 28 TAERLVRAAHGKGANIILIQELF 50 (160)
Q Consensus 28 ~~~~~i~~a~~~~~dlvv~PE~~ 50 (160)
+...+++...+.++|+|+|.|..
T Consensus 31 r~~~i~~~i~~~~~DIv~LQEv~ 53 (298)
T 3mpr_A 31 RYPVIAQMVQYHDFDIFGTQECF 53 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEESBC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC
Confidence 33444444445699999999963
No 57
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=57.46 E-value=29 Score=22.28 Aligned_cols=58 Identities=9% Similarity=0.073 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~ 91 (160)
+.+...+.+.++++.+.+.++.+++.-= .++.. +..+.. ..+.+.++++++++++.++
T Consensus 84 ~~~~~~~~~~~~i~~~~~~~~~vvl~~~-~~p~~----~~~~~~--------~~~~~~~~~~a~~~~~~~v 141 (185)
T 3hp4_A 84 PVKKMQTNLTALVKKSQAANAMTALMEI-YIPPN----YGPRYS--------KMFTSSFTQISEDTNAHLM 141 (185)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECC-CCCST----TCHHHH--------HHHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEeC-CCCCc----ccHHHH--------HHHHHHHHHHHHHcCCEEE
Confidence 4555566667777776667888877521 01110 000110 2556778899999998875
No 58
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=55.85 E-value=48 Score=24.27 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHc-CcEE
Q 031422 28 TAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL-GVVM 90 (160)
Q Consensus 28 ~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~-~i~i 90 (160)
.+.+.++...+.|+|.|.+.+.+.+-.. .+.+.++.. ++.+.+.+..++. ++.+
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~ls----p~~f~ef~~-----p~~k~i~~~i~~~~g~~~ 234 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLS----LEDYGEYVY-----PYVNYLISELKDFSDTPV 234 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSC----HHHHHHHTH-----HHHHHHHHHHHHHCCCCE
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCC----HHHHHHHhH-----HHHHHHHHHHhhcCCCCE
Confidence 3344555556779999999997653112 234555554 4555555555554 5444
No 59
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=55.76 E-value=50 Score=23.16 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccc---c-ccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYF---C-QAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~---~-~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+++.++.|+.-|++.|+.+= .+|++ . ....++..+.. -..++.+.+.++++|+.+.+
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 150 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGAL--YSYWPIDYTKTIDKKGDWERS-----VESVREVAKVAEACGVDFCL 150 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEST--TSCSSCCTTSCCCHHHHHHHH-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeccc--cCCCCCcCCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 35678888999999999999996421 11221 0 10111111111 15567778888889988876
No 60
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=54.89 E-value=42 Score=21.96 Aligned_cols=61 Identities=13% Similarity=0.136 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~ 91 (160)
.+...+.+.++++.+.+.++.+|++--...+ ... ...+.... ..+.+.++++++++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~-~~~---~~~~~~~~-----~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLE-PNR---SDPMRKTV-----DAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCC-CCT---TSHHHHHH-----HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCC-CCc---chHHHHHH-----HHHHHHHHHHHHHcCCeEE
Confidence 5556667777777777779999888311111 110 00111111 2566778888999887654
No 61
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=53.61 E-value=66 Score=24.00 Aligned_cols=68 Identities=4% Similarity=0.025 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHh-hhcccCCCChHHHHHHHHHHHcCcEEEeccc
Q 031422 26 LATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF-QRAKPYKDHPTILKMQELAKELGVVMPVSFF 95 (160)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~ 95 (160)
.++..+.++.+++.|.+-||+-....-|+... ..++. ...........++.+.+.|+++|+-+.+|..
T Consensus 53 ~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~--pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly 121 (340)
T 4h41_A 53 EKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTY--PSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLY 121 (340)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESCSEETTEESS--CCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEeeCCeecc--CcccccccCccCCcccHHHHHHHHHHHhCCeEEEecC
Confidence 45666677777788999999876433333211 11221 1111112356799999999999999988855
No 62
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=53.46 E-value=13 Score=28.08 Aligned_cols=63 Identities=11% Similarity=-0.064 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcE
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV 89 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ 89 (160)
...|.+.+.+.++...+.|..++||||..=+--... ...+..........+-++.+|.+.++.
T Consensus 205 ~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~-----~g~l~~~~Fk~gs~~~~~~LA~ksg~P 267 (367)
T 1iuq_A 205 RKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPS-----TGEWYPAPFDASSVDNMRRLIQHSDVP 267 (367)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTT-----TCCBCCCCCCHHHHHHHHHHHHTSSSC
T ss_pred hHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCC-----CCccccccccchhhhHHHHHHHHcCCC
Confidence 445666777777777767889999999733211110 000101001235677788999888887
No 63
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=51.70 E-value=29 Score=26.04 Aligned_cols=73 Identities=21% Similarity=0.229 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec----cccccccc--cc-----cchhhHhhhcccCCCChHHHHHHHHHHHcCcE
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQ----ELFEGYYF--CQ-----AQREDFFQRAKPYKDHPTILKMQELAKELGVV 89 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~P----E~~~~g~~--~~-----~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ 89 (160)
+-...++...+.++.|++.|+|.|=|. +..++.+. .. ....++.+..+. ..+.+..|.+.+++.|+.
T Consensus 29 NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l--~~e~~~~L~~~~~~~Gi~ 106 (349)
T 2wqp_A 29 NHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCAL--NEEDEIKLKEYVESKGMI 106 (349)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCC--CHHHHHHHHHHHHHTTCE
T ss_pred cccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCC--CHHHHHHHHHHHHHhCCe
Confidence 345667889999999999999999874 43323322 00 001122222221 357889999999999999
Q ss_pred EEeccc
Q 031422 90 MPVSFF 95 (160)
Q Consensus 90 i~~g~~ 95 (160)
++...+
T Consensus 107 ~~st~~ 112 (349)
T 2wqp_A 107 FISTLF 112 (349)
T ss_dssp EEEEEC
T ss_pred EEEeeC
Confidence 987644
No 64
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=51.42 E-value=66 Score=23.21 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccccccccc--------------chhhHhhhcccCCCChHHHHHHHHHHHcCc
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQA--------------QREDFFQRAKPYKDHPTILKMQELAKELGV 88 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i 88 (160)
+..++.+.+.++.|+.-|++.|+.|=.+..|..... ....+... ...++.+.+.++++|+
T Consensus 105 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv 178 (335)
T 2qw5_A 105 QEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANA------QPILDKLGEYAEIKKV 178 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHHH------HHHHHHHHHHHHHcCC
Confidence 456788899999999999999965532111111010 00111111 1456677788888999
Q ss_pred EEEe
Q 031422 89 VMPV 92 (160)
Q Consensus 89 ~i~~ 92 (160)
.+.+
T Consensus 179 ~l~l 182 (335)
T 2qw5_A 179 KLAI 182 (335)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8877
No 65
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=50.54 E-value=33 Score=22.26 Aligned_cols=69 Identities=13% Similarity=0.039 Sum_probs=39.0
Q ss_pred EEEEEeCCC---C--CCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHH
Q 031422 10 VVSALQFAC---T--DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (160)
Q Consensus 10 ~va~~Q~~~---~--~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (160)
.+.++++.. . .+.+...+.+.++++.+.+.++++++..-. .+. . +...+. ..+-+.++++++
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~-~p~-~---~~~~~~--------~~~n~~~~~~a~ 130 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIR-LPA-N---YGRRYN--------EAFSAIYPKLAK 130 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCC-CCG-G---GCHHHH--------HHHHHHHHHHHH
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEecc-CCc-c---hhHHHH--------HHHHHHHHHHHH
Confidence 455566544 1 245666666777777766668888876311 110 0 000111 245567888999
Q ss_pred HcCcEEE
Q 031422 85 ELGVVMP 91 (160)
Q Consensus 85 ~~~i~i~ 91 (160)
++++.++
T Consensus 131 ~~~v~~i 137 (190)
T 1ivn_A 131 EFDVPLL 137 (190)
T ss_dssp HTTCCEE
T ss_pred HcCCeEE
Confidence 9887765
No 66
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=50.38 E-value=50 Score=23.70 Aligned_cols=64 Identities=11% Similarity=0.026 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccc-----cccc--c-chhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGY-----YFCQ--A-QREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g-----~~~~--~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|+++=....+ ++.. . ..+.+... ...++.+.+.|+++|+.+.+
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~l 178 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDF------ADRWNPILDVFDAEGVRFAH 178 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHH------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 3457788889999999999998874211100 0000 0 00011111 14566777788888988876
No 67
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=50.16 E-value=35 Score=24.46 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccc-c-cccccchhhHhhhcccCCCChHHHHHHHHHHHcCcE-EEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEG-Y-YFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV-MPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~-i~~ 92 (160)
+..++.+++.++.|+.-|++.|+.|=.... + +......++..+.. .+.++.+.+.|+++|+. +.+
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~~l~l 177 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIA-----RDMWIELAAYAKRQGLSMLYV 177 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHH-----HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHH-----HHHHHHHHHHHHhcCCeEEEE
Confidence 456778899999999999999987643211 1 00000011111111 25567777888899988 765
No 68
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=49.18 E-value=19 Score=24.96 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=14.2
Q ss_pred HHHHHHhCCCcEEEeccccc
Q 031422 32 LVRAAHGKGANIILIQELFE 51 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~ 51 (160)
+++...+.++|+|++.|...
T Consensus 22 l~~~i~~~~~DIv~LQEt~~ 41 (265)
T 3g91_A 22 FLKWFMEEKPDILCLQEIKA 41 (265)
T ss_dssp HHHHHHHHCCSEEEEECCCS
T ss_pred HHHHHHhcCCCEEEEEeccc
Confidence 33444456899999999754
No 69
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=47.88 E-value=28 Score=28.22 Aligned_cols=70 Identities=10% Similarity=-0.008 Sum_probs=39.0
Q ss_pred HHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-c-CCeeeE-EEEEE
Q 031422 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-A-NNAHYN-SIAII 109 (160)
Q Consensus 33 i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~-~~~~~N-s~~~i 109 (160)
.+.++.+|+|+|+.|=.+.... . +. ......++..|.+++++++...... + ++..|. ++++.
T Consensus 175 ~r~la~~GAdii~~psas~~~~--g----k~---------~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I~ 239 (634)
T 3ilv_A 175 GIRHYEKGATLVLNPSASHFAF--G----KS---------AIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIA 239 (634)
T ss_dssp ---CGGGTCSEEEEEECCBCCT--T----HH---------HHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEEE
T ss_pred HHHHHHCCCcEEEEecCCcccc--C----cH---------HHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEEE
Confidence 3455667999999997543111 0 00 1233456778899999998633222 2 333443 34444
Q ss_pred cCCCCEeEE
Q 031422 110 DADGSDLGL 118 (160)
Q Consensus 110 ~~~G~i~~~ 118 (160)
++|+++..
T Consensus 240 -p~G~vla~ 247 (634)
T 3ilv_A 240 -HKGKLIQR 247 (634)
T ss_dssp -ETTEEEEE
T ss_pred -cCCeEEEE
Confidence 89988643
No 70
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=47.62 E-value=57 Score=22.49 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=39.6
Q ss_pred cEEEEEeCC--CCCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHc
Q 031422 9 VVVSALQFA--CTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (160)
Q Consensus 9 ~~va~~Q~~--~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (160)
+++..+... .....+...+.+++.++.|+.-|++.|++- +|.... +.+.... .+.++.+.+.|+++
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~---~~~~~~~-----~~~l~~l~~~a~~~ 132 (272)
T 2q02_A 65 LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLC----PLNDGT---IVPPEVT-----VEAIKRLSDLFARY 132 (272)
T ss_dssp CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEEC----CCCSSB---CCCHHHH-----HHHHHHHHHHHHTT
T ss_pred CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEc----cCCCch---hHHHHHH-----HHHHHHHHHHHHHc
Confidence 566554432 211124456788899999999899988751 222110 0111110 13445666667777
Q ss_pred CcEEEe
Q 031422 87 GVVMPV 92 (160)
Q Consensus 87 ~i~i~~ 92 (160)
++.+.+
T Consensus 133 gv~l~~ 138 (272)
T 2q02_A 133 DIQGLV 138 (272)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 777766
No 71
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=47.14 E-value=40 Score=23.58 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccccc---ccc-cchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYY---FCQ-AQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~---~~~-~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|+.|=....|. ... .....+... .+.++.+.+.++++|+.+.+
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~l 151 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA------IESVRRVIKVAEDYGIIYAL 151 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH------HHHHHTTHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 45678889999999999999988541100122 000 111112111 14456677778888888876
No 72
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=47.00 E-value=17 Score=23.80 Aligned_cols=34 Identities=9% Similarity=0.129 Sum_probs=20.0
Q ss_pred cccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEe
Q 031422 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILI 46 (160)
Q Consensus 7 ~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~ 46 (160)
.+||++++- |+-.+.+.+.+.++.+.+ ++|+|++
T Consensus 5 ~~m~i~~is-----D~H~~~~~~~~~~~~~~~-~~d~i~~ 38 (176)
T 3ck2_A 5 AKQTIIVMS-----DSHGDSLIVEEVRDRYVG-KVDAVFH 38 (176)
T ss_dssp CCEEEEEEC-----CCTTCHHHHHHHHHHHTT-TSSEEEE
T ss_pred cCcEEEEEe-----cCCCCHHHHHHHHHHhhc-CCCEEEE
Confidence 447776654 333345556666666544 7887764
No 73
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A
Probab=45.21 E-value=40 Score=24.21 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=22.4
Q ss_pred EEEEEeCCCCCCHHHHHHH-HHHHHHHHHhCCCcEEEecccccc
Q 031422 10 VVSALQFACTDDVSTNLAT-AERLVRAAHGKGANIILIQELFEG 52 (160)
Q Consensus 10 ~va~~Q~~~~~~~~~n~~~-~~~~i~~a~~~~~dlvv~PE~~~~ 52 (160)
.+-++.+|+.+ ......+ +.+.+ .+.++|+|+|.|....
T Consensus 61 ~lrv~t~Nv~g-~~~~~~~~i~~~i---~~~~~DIi~LQE~~~~ 100 (318)
T 1hd7_A 61 TLKICSWNVDG-LRAWIKKKGLDWV---KEEAPDILCLQETKCS 100 (318)
T ss_dssp CEEEEEEECSS-HHHHHHTTHHHHH---HHHCCSEEEEECCCCC
T ss_pred ceEEEEEecCc-chhhhhhhHHHHH---HhhCCCEEEEEEccCc
Confidence 35556666632 2222222 44444 4558999999998653
No 74
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=44.83 E-value=95 Score=23.19 Aligned_cols=63 Identities=11% Similarity=-0.020 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccc--cc-cchhhHhhhcccCCCChHHHHHHHHHHHcC--cEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYF--CQ-AQREDFFQRAKPYKDHPTILKMQELAKELG--VVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~--~~-~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~--i~i~~ 92 (160)
+..++.+++.++.|++-|++.|++.=.. .|+. .. +....+... -..++.+.+.++++| +.+.+
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~G~-~g~~~~~~~~~~~~~~~~------~e~L~~l~~~A~~~G~~v~l~l 179 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMWGGR-EGSEYDGSKDLAAALDRM------REGVDTAAGYIKDKGYNLRIAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCTT-CEESSGGGCCHHHHHHHH------HHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCC-CccccccccCHHHHHHHH------HHHHHHHHHHHHhcCCCeEEEE
Confidence 4567889999999999999988763111 1110 00 111112221 145667778888899 88876
No 75
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=44.49 E-value=43 Score=20.27 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=26.6
Q ss_pred HHHHHHHHHHcCcE-EEeccccccCCeeeEEEEEEcCCCCEeEEeee
Q 031422 76 ILKMQELAKELGVV-MPVSFFEEANNAHYNSIAIIDADGSDLGLYRK 121 (160)
Q Consensus 76 ~~~l~~~a~~~~i~-i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~K 121 (160)
++.+.+.+++.|+. ++.+ +...+.... +++.||+|..+..+.+
T Consensus 77 vd~~~~~l~~~G~~~~~~~-p~~~~~G~~--~~~~DPdGn~iel~~~ 120 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILD-PTDMPDGKK--AIVLDPDGHSIELCEL 120 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEE-EEECC-CEE--EEEECTTCCEEEEEC-
T ss_pred HHHHHHHHHHCCCceeccC-ceeCCCccE--EEEECCCCCEEEEEEe
Confidence 56666777778888 5443 322222222 8889999998766554
No 76
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=44.43 E-value=86 Score=23.15 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEE
Q 031422 29 AERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90 (160)
Q Consensus 29 ~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i 90 (160)
+.+.++...+.|+|.|.+.+.+-+ +.. .+.+.+... ++.+.+.+..++.++.+
T Consensus 195 ~~~~~~~~~~aGad~i~i~D~~~~-~ls---p~~f~ef~~-----p~~~~i~~~i~~~g~~~ 247 (359)
T 2inf_A 195 IIVYVKAQIKAGAKAIQIFDSWVG-ALN---QADYRTYIK-----PVMNRIFSELAKENVPL 247 (359)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGG-GSC---HHHHHHHTH-----HHHHHHHHHHGGGCSCE
T ss_pred HHHHHHHHHHhCCCEEEEeCCccc-cCC---HHHHHHHhH-----HHHHHHHHHHHHcCCcE
Confidence 344455556679999999997543 221 223455554 45555555555545443
No 77
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=44.41 E-value=41 Score=23.45 Aligned_cols=39 Identities=10% Similarity=0.138 Sum_probs=22.3
Q ss_pred EEEEEeCCCCCCHHHHHHH-HHHHHHHHHhCCCcEEEecccccc
Q 031422 10 VVSALQFACTDDVSTNLAT-AERLVRAAHGKGANIILIQELFEG 52 (160)
Q Consensus 10 ~va~~Q~~~~~~~~~n~~~-~~~~i~~a~~~~~dlvv~PE~~~~ 52 (160)
.+-++.+|+.+ .....++ +.+.+ .+.++|+|++.|....
T Consensus 28 ~l~v~t~Ni~~-~~~~~~~~i~~~i---~~~~~DIi~LQE~~~~ 67 (285)
T 2o3h_A 28 TLKIASWNVDG-LRAWIKKKGLDWV---KEEAPDILCLQETKCS 67 (285)
T ss_dssp CEEEEEEECSS-HHHHHHTTHHHHH---HHHCCSEEEEECCCCC
T ss_pred ceEEEEEeccc-ChhhhhhhHHHHH---HhcCCCEEEEEEeecc
Confidence 34555556532 2222233 44444 4458999999998654
No 78
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}
Probab=41.98 E-value=24 Score=24.14 Aligned_cols=23 Identities=17% Similarity=0.174 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccccc
Q 031422 26 LATAERLVRAAHGKGANIILIQELFE 51 (160)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~~ 51 (160)
.+++.+.++ +.++|+|++.|...
T Consensus 16 ~~~i~~~i~---~~~~Dii~lQE~~~ 38 (257)
T 2voa_A 16 LHIVIPWLK---ENKPDILCMQETKV 38 (257)
T ss_dssp HHHHHHHHH---HHCCSEEEEECCCC
T ss_pred HHHHHHHHh---hcCCCEEEEEEeec
Confidence 344444444 45899999999854
No 79
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=40.41 E-value=1.1e+02 Score=22.65 Aligned_cols=48 Identities=17% Similarity=0.059 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHH
Q 031422 28 TAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (160)
Q Consensus 28 ~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (160)
.+.+.++...+.|+|.|.+.+.+. |+.. .+.+.++.. ++.+.+.+..+
T Consensus 198 ~~~~~~~~~i~aGad~i~i~D~~~-~~ls---p~~f~ef~~-----p~~k~i~~~i~ 245 (367)
T 1r3s_A 198 ALVPYLVGQVVAGAQALQLFESHA-GHLG---PQLFNKFAL-----PYIRDVAKQVK 245 (367)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTG-GGSC---HHHHHHHTH-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEecCcc-ccCC---HHHHHHHhH-----HHHHHHHHHHh
Confidence 334455555678999999888755 3221 334555555 44455555555
No 80
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=40.21 E-value=24 Score=23.54 Aligned_cols=34 Identities=6% Similarity=0.219 Sum_probs=21.7
Q ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 9 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 9 ~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
||++++- |+-.+.+.+.+.++.+.+.++|+|++-
T Consensus 26 m~i~~iS-----D~Hg~~~~l~~~l~~~~~~~~D~ii~~ 59 (190)
T 1s3l_A 26 MKIGIMS-----DTHDHLPNIRKAIEIFNDENVETVIHC 59 (190)
T ss_dssp CEEEEEC-----CCTTCHHHHHHHHHHHHHSCCSEEEEC
T ss_pred eEEEEEe-----eCCCCHHHHHHHHHHHhhcCCCEEEEC
Confidence 6666553 333455666677777766789987653
No 81
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=40.16 E-value=74 Score=22.97 Aligned_cols=45 Identities=22% Similarity=0.232 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCCc-EEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 27 ATAERLVRAAHGKGAN-IILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~d-lvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+...+.+++|.+.|+. +|++++ |++ ..-.+++.+.+++.++.++.
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~----G~~-----------------~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITE----HIP-----------------VHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCS----CCC-----------------HHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEECC----CCC-----------------HHHHHHHHHHHHHcCCEEEc
Confidence 4567778888888999 565665 332 02246788899999997764
No 82
>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis}
Probab=39.93 E-value=32 Score=23.39 Aligned_cols=21 Identities=29% Similarity=0.382 Sum_probs=15.1
Q ss_pred HHHHHHhCCCcEEEecccccc
Q 031422 32 LVRAAHGKGANIILIQELFEG 52 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~~~~ 52 (160)
+.+...+.++|+|+|.|....
T Consensus 20 i~~~i~~~~~DIi~LQE~~~~ 40 (259)
T 2jc5_A 20 FYEYIAASGADIVCVQELKAQ 40 (259)
T ss_dssp HHHHHHHTTCSEEEEECCCCC
T ss_pred HHHHHHhcCCCEEEEEEecch
Confidence 344445678999999998653
No 83
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=39.91 E-value=39 Score=25.34 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=46.3
Q ss_pred CCcccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCc-----EEEec----ccccccccc-c---cchhhHhhhcccCC
Q 031422 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGAN-----IILIQ----ELFEGYYFC-Q---AQREDFFQRAKPYK 71 (160)
Q Consensus 5 ~~~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~d-----lvv~P----E~~~~g~~~-~---~~~~~~~~~~~~~~ 71 (160)
|++++-||=+-. +-...++..++.++.|++.|+| .|=|. |...+.... . .+.+.+.+...
T Consensus 3 ~~~~~IIAEig~----NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el--- 75 (350)
T 3g8r_A 3 LSKPLFIFEMAN----NHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRL--- 75 (350)
T ss_dssp --CCEEEEECTT----TTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCC---
T ss_pred CCCCEEEEEECC----CccCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcC---
Confidence 334444443333 3344456777777777777776 77674 332221110 0 11112222222
Q ss_pred CChHHHHHHHHHHHcCcEEEeccc
Q 031422 72 DHPTILKMQELAKELGVVMPVSFF 95 (160)
Q Consensus 72 ~~~~~~~l~~~a~~~~i~i~~g~~ 95 (160)
..+.+..|.+.+++.|+.++...+
T Consensus 76 ~~e~~~~L~~~~~~~Gi~~~st~f 99 (350)
T 3g8r_A 76 QPEQMQKLVAEMKANGFKAICTPF 99 (350)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCcEEeccC
Confidence 357888999999999999987644
No 84
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis}
Probab=39.23 E-value=30 Score=23.52 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=16.4
Q ss_pred HHHHHHHHhCCCcEEEecccccc
Q 031422 30 ERLVRAAHGKGANIILIQELFEG 52 (160)
Q Consensus 30 ~~~i~~a~~~~~dlvv~PE~~~~ 52 (160)
.++.+...+.++|+|++.|....
T Consensus 16 ~~i~~~i~~~~~DIv~LQE~~~~ 38 (256)
T 2jc4_A 16 PQVQNLLADNPPDILVLQELKLD 38 (256)
T ss_dssp HHHHHHHHSSCCSEEEEECCCSC
T ss_pred HHHHHHHHhcCCCEEEEEeeccc
Confidence 34444455679999999998653
No 85
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=39.01 E-value=1.3e+02 Score=22.88 Aligned_cols=62 Identities=10% Similarity=0.065 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEecccc
Q 031422 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~ 96 (160)
..+...+.++.+++.|+|+|.+-=+-. -....+ +... ..+.+..|.+.+++.|+.++.....
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkp-rts~~~----f~gl-----~~egl~~L~~~~~~~Gl~~~te~~d 215 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKP-RTSPYD----FQGL-----GLEGLKILKRVSDEYGLGVISEIVT 215 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCC-CSSTTS----CCCC-----THHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccC-CCChHh----hcCC-----CHHHHHHHHHHHHHcCCEEEEecCC
Confidence 466778888888889999998754310 000001 1111 1256678899999999999886544
No 86
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=38.58 E-value=88 Score=21.46 Aligned_cols=43 Identities=14% Similarity=0.201 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+.+.+.++.|+.-|++.|+++- |. ..++.+.+.|+++++.+.+
T Consensus 91 ~~~~~~i~~A~~lGa~~v~~~~----~~-------------------~~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 91 SDWEKMFKFAKAMDLEFITCEP----AL-------------------SDWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp THHHHHHHHHHHTTCSEEEECC----CG-------------------GGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEecC----CH-------------------HHHHHHHHHHHHhCCEEEE
Confidence 4577788888888898888762 10 2235567777777777655
No 87
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=38.55 E-value=61 Score=22.39 Aligned_cols=65 Identities=15% Similarity=0.103 Sum_probs=35.5
Q ss_pred hCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-ccccccCCeeeEEEEEEcCCCCEe
Q 031422 38 GKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFEEANNAHYNSIAIIDADGSDL 116 (160)
Q Consensus 38 ~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~~~~~~~~Ns~~~i~~~G~i~ 116 (160)
-.+++++++=|-+.. .. ... .....+.++++.++.+..+++ ..-... -++.+..+++ .+|+++
T Consensus 161 ~~~p~llllDEPts~-LD---------~~~----~~~i~~~l~~l~~~~g~tvi~vtHd~~~-~~~~d~i~~l-~~G~i~ 224 (235)
T 3tif_A 161 ANNPPIILADQPTWA-LD---------SKT----GEKIMQLLKKLNEEDGKTVVVVTHDINV-ARFGERIIYL-KDGEVE 224 (235)
T ss_dssp TTCCSEEEEESTTTT-SC---------HHH----HHHHHHHHHHHHHHHCCEEEEECSCHHH-HTTSSEEEEE-ETTEEE
T ss_pred HcCCCEEEEeCCccc-CC---------HHH----HHHHHHHHHHHHHHcCCEEEEEcCCHHH-HHhCCEEEEE-ECCEEE
Confidence 346778888775431 11 000 125566777777776666655 432222 1345666777 468776
Q ss_pred EE
Q 031422 117 GL 118 (160)
Q Consensus 117 ~~ 118 (160)
..
T Consensus 225 ~~ 226 (235)
T 3tif_A 225 RE 226 (235)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 88
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}
Probab=38.28 E-value=23 Score=24.53 Aligned_cols=22 Identities=14% Similarity=0.273 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEecccc
Q 031422 26 LATAERLVRAAHGKGANIILIQELF 50 (160)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~ 50 (160)
.+++.+.| .+.++|+|+|.|..
T Consensus 27 ~~~i~~~i---~~~~~DIv~LQEv~ 48 (267)
T 3g6s_A 27 KDRVCQFI---KDHELDIVGMQEVL 48 (267)
T ss_dssp HHHHHHHH---HHTTCSEEEEESBC
T ss_pred HHHHHHHH---HHcCCCEEEEecCC
Confidence 34444444 45689999999964
No 89
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=37.99 E-value=57 Score=25.59 Aligned_cols=46 Identities=15% Similarity=0.243 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 031422 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (160)
+...+.++++.+.|+.+||+.| ||+ .....++.+.++++++-+++.
T Consensus 47 ~~v~~~v~e~~~~Gv~~viis~----Gf~-----------------~~~~~~l~~~A~~~g~rliGP 92 (480)
T 3dmy_A 47 EYAAELANQALDRNLNVMMFSD----NVT-----------------LEDEIQLKTRAREKGLLVMGP 92 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEECCC----CCC-----------------HHHHHHHHHHHHHTTCCEECS
T ss_pred HHHHHHHHHHHhcCCCEEEECC----CCC-----------------HHHHHHHHHHHHHcCCEEEec
Confidence 5667788888888999888876 443 023367899999999999874
No 90
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=37.98 E-value=37 Score=21.86 Aligned_cols=41 Identities=10% Similarity=0.055 Sum_probs=24.7
Q ss_pred HHHHHHHHHcCcEEEeccccccCCee--eEEEEEEcCCCCEeEEeeec
Q 031422 77 LKMQELAKELGVVMPVSFFEEANNAH--YNSIAIIDADGSDLGLYRKS 122 (160)
Q Consensus 77 ~~l~~~a~~~~i~i~~g~~~~~~~~~--~Ns~~~i~~~G~i~~~y~K~ 122 (160)
+.+.++++.+++.+.. .+..+ ..+.++++++|.|+..|...
T Consensus 104 ~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~lID~~G~i~~~~~g~ 146 (170)
T 3me7_A 104 EDLFKLLDAIDFRFMT-----AGNDFIHPNVVVVLSPELQIKDYIYGV 146 (170)
T ss_dssp HHHHHHHHHTTCCCEE-----ETTEEECCCEEEEECTTSBEEEEEESS
T ss_pred HHHHHHHHHCCeEEec-----CCCccccCceEEEECCCCeEEEEEeCC
Confidence 4566677766654432 11111 13578999999998776543
No 91
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=37.10 E-value=96 Score=21.03 Aligned_cols=19 Identities=16% Similarity=-0.025 Sum_probs=16.6
Q ss_pred ChHHHHHHHHHHHcCcEEE
Q 031422 73 HPTILKMQELAKELGVVMP 91 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~ 91 (160)
..+.+.++++|+++++.++
T Consensus 149 ~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 149 TRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp CHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHhCCeEE
Confidence 5788899999999998886
No 92
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=37.10 E-value=66 Score=23.33 Aligned_cols=55 Identities=18% Similarity=0.204 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEE-eccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIIL-IQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv-~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++ .|=++... .+....+.++.++...++++++ ..|.
T Consensus 96 st~~ai~la~~A~~~Gadavlv~~P~y~~~-----------------~~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 96 NTRTSVELAEAAASAGADGLLVVTPYYSKP-----------------SQEGLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------CHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------CHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 456677788888888999643 33332210 0135667788888887887766 5554
No 93
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=36.37 E-value=68 Score=23.00 Aligned_cols=56 Identities=13% Similarity=0.179 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++..+ . .+....+.++.++...++++++ ..|.
T Consensus 75 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~---~-------------s~~~l~~~f~~va~a~~lPiilYn~P~ 132 (286)
T 2r91_A 75 NADEAIALAKYAESRGAEAVASLPPYYFPR---L-------------SERQIAKYFRDLCSAVSIPVFLYNYPA 132 (286)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCSSTT---C-------------CHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCCCC---C-------------CHHHHHHHHHHHHHhcCCCEEEEeChh
Confidence 3566778888888889996543 3222110 0 1136677788888888888766 5553
No 94
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=36.15 E-value=71 Score=22.96 Aligned_cols=54 Identities=17% Similarity=0.215 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhCCCcEEE-eccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-ccc
Q 031422 25 NLATAERLVRAAHGKGANIIL-IQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFF 95 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv-~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~ 95 (160)
+.++..++.+.|.+.|+|-++ .|=++... .+....+.++.++...++++++ ..|
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~-----------------s~~~l~~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVSPYYNKP-----------------TQEGIYQHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------CHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-----------------CHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 356777888888888999643 33322210 0135666777777777777765 444
No 95
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=35.91 E-value=63 Score=20.01 Aligned_cols=42 Identities=7% Similarity=-0.041 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+...+.++++.+.|+..|+|.. |+. -+++.+.|+++++-++.
T Consensus 69 ~~v~~~v~e~~~~g~k~v~~~~----G~~--------------------~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKRVIFNP----GTE--------------------NEELEEILSENGIEPVI 110 (122)
T ss_dssp HHHGGGHHHHHHHCCSEEEECT----TCC--------------------CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECC----CCC--------------------hHHHHHHHHHcCCeEEC
Confidence 5666777777777888765532 331 14688999999999873
No 96
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=35.66 E-value=1.1e+02 Score=22.05 Aligned_cols=45 Identities=24% Similarity=0.183 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCc-EEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 27 ATAERLVRAAHGKGAN-IILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~d-lvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+...+.++++.+.++. +|++.+ |++ ....+.+.+.+++.++.++.
T Consensus 75 ~~~~~~~~ea~~~Gi~~vVi~t~----G~~-----------------~~~~~~l~~~a~~~gi~vig 120 (288)
T 1oi7_A 75 PAAADAALEAAHAGIPLIVLITE----GIP-----------------TLDMVRAVEEIKALGSRLIG 120 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCS----CCC-----------------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECC----CCC-----------------HHHHHHHHHHHHHcCCEEEe
Confidence 4556777777788888 566665 432 02246788899999997765
No 97
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=35.61 E-value=1.2e+02 Score=21.93 Aligned_cols=31 Identities=16% Similarity=0.007 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 031422 19 TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 19 ~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
..+.+++++.+.+.++.|++.+.++.+.||.
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d 143 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPED 143 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 3468889999999999999999998887874
No 98
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=35.23 E-value=63 Score=23.40 Aligned_cols=55 Identities=9% Similarity=0.159 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++... .+....+.++.++...++++++ ..|.
T Consensus 92 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~-----------------s~~~l~~~f~~va~a~~lPiilYn~P~ 148 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAVMLVAPYYNKP-----------------SQEGMYQHFKAIAESTPLPVMLYNVPG 148 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------CHHHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-----------------CHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 3566778888888889996433 3322210 0135667777778777777765 5443
No 99
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=34.95 E-value=73 Score=22.88 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-ccccccC---
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFEEAN--- 99 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~~~~--- 99 (160)
+.++..++.+.|.+.|+|-++. |=++... . .+....+.++.++...++++++ ..|.+.+
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~---~-------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l 139 (288)
T 2nuw_A 76 NLNDVMELVKFSNEMDILGVSSHSPYYFPR---L-------------PEKFLAKYYEEIARISSHSLYIYNYPAATGYDI 139 (288)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEECCCCSSCS---C-------------CHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCCCC---C-------------CHHHHHHHHHHHHHhcCCCEEEEECchHhCcCC
Confidence 3566778888888889997544 3222110 0 1236777888888888888876 5554321
Q ss_pred -----CeeeEEEEEEcCCCCE
Q 031422 100 -----NAHYNSIAIIDADGSD 115 (160)
Q Consensus 100 -----~~~~Ns~~~i~~~G~i 115 (160)
.++ |-..+-+..|.+
T Consensus 140 ~~~~~~~L-nIvgiKdssgd~ 159 (288)
T 2nuw_A 140 PPSILKSL-PVKGIKDTNQDL 159 (288)
T ss_dssp CHHHHTTT-TEEEEEECCSCH
T ss_pred CHHHHhcc-EEEEEEeCCCCH
Confidence 245 766776666653
No 100
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=34.63 E-value=55 Score=19.61 Aligned_cols=18 Identities=6% Similarity=0.058 Sum_probs=7.8
Q ss_pred CCCCCCcccEEEEEeCCC
Q 031422 1 MEKGKRREVVVSALQFAC 18 (160)
Q Consensus 1 ~~~~~~~~~~va~~Q~~~ 18 (160)
|+..|++.++|.++--+.
T Consensus 1 M~~~~~~~~~iLivdd~~ 18 (143)
T 3cnb_A 1 MSLNVKNDFSILIIEDDK 18 (143)
T ss_dssp --------CEEEEECSCH
T ss_pred CcccccCCceEEEEECCH
Confidence 677777888999887654
No 101
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=33.90 E-value=52 Score=20.64 Aligned_cols=27 Identities=19% Similarity=0.181 Sum_probs=19.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
.+...+..+.++.++-.+.++++|...
T Consensus 50 ~C~~~~~~l~~~~~~~~~~~~~vv~vs 76 (163)
T 3gkn_A 50 GATTEGLDFNALLPEFDKAGAKILGVS 76 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 356667777777777777788887653
No 102
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=33.71 E-value=72 Score=22.87 Aligned_cols=16 Identities=13% Similarity=0.104 Sum_probs=11.1
Q ss_pred HHHHHHHHHHcCcEEE
Q 031422 76 ILKMQELAKELGVVMP 91 (160)
Q Consensus 76 ~~~l~~~a~~~~i~i~ 91 (160)
...+.+.++++++..+
T Consensus 139 ~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 139 SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCeEE
Confidence 4567788888887643
No 103
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=33.45 E-value=79 Score=23.07 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+.+...++.+.|.+.|+|-++. |=++.. . .+....+.++.++...++++++
T Consensus 91 st~~ai~la~~A~~~Gadavlv~~P~y~~----~-------------s~~~l~~~f~~va~a~~lPiil 142 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHPY----I-------------TDAGAVEYYRNIIEALDAPSII 142 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCSC----C-------------CHHHHHHHHHHHHHHSSSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCC----C-------------CHHHHHHHHHHHHHhCCCCEEE
Confidence 4566778888888889997544 322211 0 0135667778888777777654
No 104
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=33.29 E-value=1e+02 Score=20.29 Aligned_cols=66 Identities=9% Similarity=0.041 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~ 91 (160)
+.+...+.+.+.++.+...++.+++..= .+.....+........... ..+-+.++++|+++++.++
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~~---~P~~~~~~~~~~~~~~~~i--~~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTSV---LPAAEFPWRREIKDAPQKI--QSLNARIEAYAKANKIPFV 164 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECC---CCCSCCTTCTTCCCHHHHH--HHHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEee---eccCcccccccccchhHHH--HHHHHHHHHHHHhcCCeEe
Confidence 4555566666677776677888877421 1100000000000000000 1344678888999887764
No 105
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=32.89 E-value=1.5e+02 Score=22.09 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (160)
+.+.+.+...+.++..++.|.+-||= .+..|. ++-...+++++++.++.|+.|
T Consensus 77 ~~~~~~~~~~~~l~~~k~~Gg~tIVd--~T~~g~------------------GRd~~~l~~is~~tGv~IV~~ 129 (360)
T 3tn4_A 77 REDESLRVAVEAAEKMKRHGIQTVVD--PTPNDC------------------GRNPAFLRRVAEETGLNIICA 129 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEE--CCCTTT------------------TCCHHHHHHHHHHHCCEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhcCCCeEEE--CCCCCc------------------CcCHHHHHHHHHHcCCCEEEe
Confidence 34566777778888888888888873 322222 355677889999999998773
No 106
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=32.89 E-value=1e+02 Score=21.08 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 26 LATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.+.+.+.++.|+.-|++.|+++ ++ .+.++.+.+.++++++.+.+
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~~----p~-------------------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVGV----PN-------------------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE----EC-------------------GGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEec----CC-------------------HHHHHHHHHHHHHcCCEEEE
Confidence 4556666666766677776653 11 14456778888888888766
No 107
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=32.76 E-value=87 Score=22.54 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++.. . .+....+.++.++...++++++ ..|.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~----~-------------s~~~l~~~f~~va~a~~lPiilYn~P~ 136 (294)
T 2ehh_A 80 ATHEAVHLTAHAKEVGADGALVVVPYYNK----P-------------TQRGLYEHFKTVAQEVDIPIIIYNIPS 136 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSC----C-------------CHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCC----C-------------CHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 3566777888888889996543 322221 0 0135666677777777777665 4443
No 108
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=32.59 E-value=1.5e+02 Score=21.82 Aligned_cols=38 Identities=8% Similarity=0.157 Sum_probs=28.4
Q ss_pred cEEEEEeCCCC--------CCHHHHHHHHHHHHHHHHhCCCcEEEe
Q 031422 9 VVVSALQFACT--------DDVSTNLATAERLVRAAHGKGANIILI 46 (160)
Q Consensus 9 ~~va~~Q~~~~--------~~~~~n~~~~~~~i~~a~~~~~dlvv~ 46 (160)
+++.+++.... ...+..++.+.+.++.|++.|+++|++
T Consensus 69 L~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 69 LALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp CEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 56666654331 235677888999999999999999998
No 109
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=32.08 E-value=91 Score=22.16 Aligned_cols=47 Identities=11% Similarity=-0.062 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+.+.+.+..+-+.|.|+|+.-..++. +..+.+.|.+.|++.+..+.+
T Consensus 71 ~av~e~~~~iL~aG~dvv~~S~gaLa-------------------d~~l~~~L~~aA~~gg~~l~v 117 (253)
T 1j5p_A 71 EAVKEYSLQILKNPVNYIIISTSAFA-------------------DEVFRERFFSELKNSPARVFF 117 (253)
T ss_dssp HHHHHHHHHHTTSSSEEEECCGGGGG-------------------SHHHHHHHHHHHHTCSCEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEcChhhhc-------------------CHHHHHHHHHHHHHCCCeEEe
Confidence 35556677777789999998875553 135668899999998877744
No 110
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=32.07 E-value=69 Score=20.74 Aligned_cols=26 Identities=15% Similarity=0.042 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
+...+..+.++.++-.+.++.+|...
T Consensus 67 C~~el~~l~~l~~~~~~~~~~vv~Vs 92 (179)
T 3ixr_A 67 SSTEGLEFNLLLPQFEQINATVLGVS 92 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 56667777777777777778877663
No 111
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=31.94 E-value=91 Score=21.55 Aligned_cols=34 Identities=26% Similarity=0.459 Sum_probs=23.1
Q ss_pred HHHHHHcCcEEEeccccccCCeeeEEEEEEcCCCCEeEEe
Q 031422 80 QELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLY 119 (160)
Q Consensus 80 ~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y 119 (160)
.++++.++++. ...+..+-+.++|+++|.|...+
T Consensus 130 ~~va~~yGv~~------~~~g~~~R~tFiIDp~g~Ir~~~ 163 (219)
T 3tue_A 130 KNIARSYGVLE------ESQGVAYRGLFIIDPHGMLRQIT 163 (219)
T ss_dssp SHHHHHTTCEE------TTTTEECEEEEEECTTSBEEEEE
T ss_pred cHHHHHcCCcc------cCCCeeEEEEEEECCCCeEEEEE
Confidence 45666776653 23355667889999999886543
No 112
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=31.78 E-value=74 Score=22.73 Aligned_cols=16 Identities=19% Similarity=0.142 Sum_probs=10.1
Q ss_pred HHHHHHHHHHcCcEEE
Q 031422 76 ILKMQELAKELGVVMP 91 (160)
Q Consensus 76 ~~~l~~~a~~~~i~i~ 91 (160)
...+.+.++++++..+
T Consensus 137 ~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 137 SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCeEE
Confidence 3556777777776643
No 113
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=31.65 E-value=69 Score=22.99 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++... .+....+.+++++...++++++ ..|.
T Consensus 80 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~-----------------s~~~l~~~f~~ia~a~~lPiilYn~P~ 136 (289)
T 2yxg_A 80 CTEEAIELSVFAEDVGADAVLSITPYYNKP-----------------TQEGLRKHFGKVAESINLPIVLYNVPS 136 (289)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCC-----------------CHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------CHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 3566677778887788886533 3222210 0135566677777776777655 4443
No 114
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=31.20 E-value=53 Score=23.05 Aligned_cols=18 Identities=11% Similarity=0.178 Sum_probs=12.6
Q ss_pred HHHHHHHcCcEEEecccc
Q 031422 79 MQELAKELGVVMPVSFFE 96 (160)
Q Consensus 79 l~~~a~~~~i~i~~g~~~ 96 (160)
+.+.++++++.++.|...
T Consensus 119 vi~~~~~~gi~~ipGv~T 136 (232)
T 4e38_A 119 TVRACQEIGIDIVPGVNN 136 (232)
T ss_dssp HHHHHHHHTCEEECEECS
T ss_pred HHHHHHHcCCCEEcCCCC
Confidence 556677788888877553
No 115
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=30.76 E-value=1.6e+02 Score=21.57 Aligned_cols=49 Identities=16% Similarity=0.222 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHc
Q 031422 29 AERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (160)
Q Consensus 29 ~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (160)
+.+.++...+.|+|.|.+.+.+-+ +.. ...+.+... ++.+.+.+..++.
T Consensus 195 ~~~~~~~~~~aGad~iqi~D~~~~-~ls---p~~f~ef~~-----p~~~~i~~~i~~~ 243 (353)
T 1j93_A 195 MAKYIRYQADSGAQAVQIFDSWAT-ELS---PVDFEEFSL-----PYLKQIVDSVKLT 243 (353)
T ss_dssp HHHHHHHHHHTTCSEEEEECGGGG-GSC---HHHHHHHTH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCcccc-cCC---HHHHHHHhH-----HHHHHHHHHHHHh
Confidence 344444556779999999997632 211 224555554 4555555555543
No 116
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=30.75 E-value=90 Score=22.55 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCCCc-EEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 28 TAERLVRAAHGKGAN-IILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 28 ~~~~~i~~a~~~~~d-lvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
...+.++++.+.|+. +|++.+ |++ ..-.+.+.+.+++.++.++.
T Consensus 83 ~~~~~v~ea~~~Gi~~vVi~t~----G~~-----------------~~~~~~l~~~A~~~gi~viG 127 (297)
T 2yv2_A 83 FAPDAVYEAVDAGIRLVVVITE----GIP-----------------VHDTMRFVNYARQKGATIIG 127 (297)
T ss_dssp GHHHHHHHHHHTTCSEEEECCC----CCC-----------------HHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEECC----CCC-----------------HHHHHHHHHHHHHcCCEEEc
Confidence 445667777777888 555554 332 02246788899999997764
No 117
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=30.65 E-value=41 Score=21.76 Aligned_cols=19 Identities=26% Similarity=0.406 Sum_probs=15.3
Q ss_pred EEEEEEcCCCCEeEEeeec
Q 031422 104 NSIAIIDADGSDLGLYRKS 122 (160)
Q Consensus 104 Ns~~~i~~~G~i~~~y~K~ 122 (160)
.+.++++++|.++..|...
T Consensus 135 ~~~~liD~~G~i~~~~~g~ 153 (170)
T 4hde_A 135 TSFYLIDQNGKVMKKYSGI 153 (170)
T ss_dssp CEEEEECTTSCEEEEEESS
T ss_pred eEEEEEcCCCeEEEEECCC
Confidence 3578999999998888754
No 118
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.60 E-value=94 Score=22.36 Aligned_cols=56 Identities=14% Similarity=0.099 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHc---CcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL---GVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~---~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++... . .+....+.++.++... ++++++ ..|.
T Consensus 83 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~---~-------------s~~~l~~~f~~va~a~p~~~lPiilYn~P~ 143 (294)
T 3b4u_A 83 SIEDAADQSAEALNAGARNILLAPPSYFKN---V-------------SDDGLFAWFSAVFSKIGKDARDILVYNIPS 143 (294)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCSSCS---C-------------CHHHHHHHHHHHHHHHCTTCCCEEEEECHH
T ss_pred cHHHHHHHHHHHHhcCCCEEEEcCCcCCCC---C-------------CHHHHHHHHHHHHHhcCCCCCcEEEEECcc
Confidence 3566778888888889996543 3322210 0 0135667777777776 677665 5543
No 119
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=30.37 E-value=1e+02 Score=19.41 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=30.7
Q ss_pred ccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 8 ~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
++.+|++..+. ..+.+.-+++....+..|+..|-+-+++.
T Consensus 129 ~~siGi~~~~~~~~~~~~ll~~A~~Al~~Ak~~g~n~~~~~ 169 (177)
T 3ign_A 129 TVSMGIAQLTETPENYMQWMQKADEALYKAKESGRNKVVVS 169 (177)
T ss_dssp CEEEEEEECCSCCSSHHHHHHHHHHHHHHHHHTTSSSEEEC
T ss_pred EEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHcCCCcEeec
Confidence 46788888776 36788889999999999988765554443
No 120
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=30.20 E-value=95 Score=18.85 Aligned_cols=44 Identities=9% Similarity=0.083 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHcCcEEEeccccccCCeeeEEEEEEcCCCCEeEEee
Q 031422 74 PTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 120 (160)
.-++.+.+.+++.++.++.+-.....+ ..+++.+|+|..+..+.
T Consensus 107 ~d~~~~~~~l~~~G~~~~~~~~~~~~g---~~~~~~DPdG~~iel~~ 150 (156)
T 3kol_A 107 QLFDRAVTVIGENKIAIAHGPVTRPTG---RGVYFYDPDGFMIEIRC 150 (156)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEC-CC---EEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHHCCCccccCceecCCc---cEEEEECCCCCEEEEEe
Confidence 356666777777888876543222223 26778899999876654
No 121
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=30.11 E-value=35 Score=22.75 Aligned_cols=21 Identities=29% Similarity=0.449 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhCCCcEEEec
Q 031422 27 ATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~P 47 (160)
..+.++++.+.+.++|+||+-
T Consensus 19 ~~~~~~~~~~~~~~~D~vi~~ 39 (228)
T 1uf3_A 19 EALEKFVKLAPDTGADAIALI 39 (228)
T ss_dssp HHHHHHHTHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHhhcCCCEEEEC
Confidence 344555555555589987653
No 122
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=29.99 E-value=78 Score=22.77 Aligned_cols=54 Identities=9% Similarity=0.113 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEE--eccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIIL--IQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv--~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++ .|=++-+ .+....+.++.++...++++++ ..|.
T Consensus 82 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~------------------~~~~l~~~f~~ia~a~~lPiilYn~P~ 138 (292)
T 3daq_A 82 DTEKSIQASIQAKALGADAIMLITPYYNKT------------------NQRGLVKHFEAIADAVKLPVVLYNVPS 138 (292)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCCSSCC------------------CHHHHHHHHHHHHHHHCSCEEEEECHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCCCCCC------------------CHHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 356677777778777888543 3322110 0135667788888777888766 5553
No 123
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=29.62 E-value=87 Score=22.53 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++... . .+....+.++.++...++++++ ..|.
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~---~-------------s~~~l~~~f~~va~a~~lPiilYn~P~ 133 (293)
T 1w3i_A 76 NLDDAIRLAKLSKDFDIVGIASYAPYYYPR---M-------------SEKHLVKYFKTLCEVSPHPVYLYNYPT 133 (293)
T ss_dssp CHHHHHHHHHHGGGSCCSEEEEECCCSCSS---C-------------CHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCC---C-------------CHHHHHHHHHHHHhhCCCCEEEEECch
Confidence 3566778888888889996543 3222110 0 1136677788888888888766 5553
No 124
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=28.94 E-value=45 Score=21.83 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccc
Q 031422 26 LATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
.+.+.+.++++.+.++|+|+.==.
T Consensus 55 ~~~I~~~l~~a~~~~~DlVittGG 78 (167)
T 2g2c_A 55 YDTVVEAIATALKQGARFIITAGG 78 (167)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCC
Confidence 356666777776656999987554
No 125
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=28.71 E-value=1.1e+02 Score=22.67 Aligned_cols=20 Identities=10% Similarity=0.140 Sum_probs=17.9
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.|.++++++++.+++
T Consensus 219 ~~~l~~l~~l~~~~~~~li~ 238 (427)
T 3fq8_A 219 AGFLEGLREITLEHDALLVF 238 (427)
T ss_dssp TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 47789999999999999986
No 126
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=28.69 E-value=1.8e+02 Score=21.56 Aligned_cols=63 Identities=13% Similarity=-0.007 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEeccccccccc--cc-cchhhHhhhcccCCCChHHHHHHHHHHHcC--cEEEe
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELFEGYYF--CQ-AQREDFFQRAKPYKDHPTILKMQELAKELG--VVMPV 92 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~--~~-~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~--i~i~~ 92 (160)
+..++.+.+.++.|+.-|++.|++.=.. .|+. .. +....+... -..++.+.+.++++| +.+.+
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~g~-~~~~~~~~~~~~~~~~~~------~e~L~~l~~~A~~~G~~v~l~l 179 (386)
T 1muw_A 112 RYALRKTIRNIDLAVELGAKTYVAWGGR-EGAESGAAKDVRVALDRM------KEAFDLLGEYVTSQGYDIRFAI 179 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCTT-CEESSTTSCCHHHHHHHH------HHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCC-CcccccccCCHHHHHHHH------HHHHHHHHHHHHhcCCCeEEEE
Confidence 5567888999999999999988763211 1110 00 111112222 145567777888888 88766
No 127
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=28.64 E-value=1.4e+02 Score=22.22 Aligned_cols=20 Identities=10% Similarity=0.218 Sum_probs=18.0
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.+.++++++++.+++
T Consensus 220 ~~~l~~l~~l~~~~~~~li~ 239 (429)
T 3k28_A 220 PGFLEGLREVTEQNGALLIF 239 (429)
T ss_dssp TTHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 47889999999999999986
No 128
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=28.64 E-value=79 Score=22.84 Aligned_cols=55 Identities=15% Similarity=0.210 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++.. . .+....+.++.++...++++++ ..|.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~----~-------------s~~~l~~~f~~va~a~~lPiilYn~P~ 136 (297)
T 2rfg_A 80 NPVEAVRYAQHAQQAGADAVLCVAGYYNR----P-------------SQEGLYQHFKMVHDAIDIPIIVYNIPP 136 (297)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCTTTC----C-------------CHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCC----C-------------CHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 4566777788888888986543 322211 0 0135667778888777777766 5554
No 129
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}
Probab=28.57 E-value=1.3e+02 Score=19.81 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=28.4
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCc-EEEecc
Q 031422 8 EVVVSALQFACTDDVSTNLATAERLVRAAHGKGAN-IILIQE 48 (160)
Q Consensus 8 ~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~d-lvv~PE 48 (160)
++.+|++...+..+.+.-+++....+.+|++.|-+ +++|-|
T Consensus 123 t~SiGia~~~~~~~~~~ll~~Ad~Aly~AK~~Grn~~~~~~~ 164 (179)
T 3tvk_A 123 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDE 164 (179)
T ss_dssp CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEECH
Confidence 35677776555456777888888888889887654 555543
No 130
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.30 E-value=82 Score=22.66 Aligned_cols=55 Identities=20% Similarity=0.069 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++.. .+ +....+.++.++...++++++ ..|.
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~~P~y~~----~~-------------~~~l~~~f~~va~a~~lPiilYn~P~ 140 (293)
T 1f6k_A 84 NLKEAVELGKYATELGYDCLSAVTPFYYK----FS-------------FPEIKHYYDTIIAETGSNMIVYSIPF 140 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCCSSC----CC-------------HHHHHHHHHHHHHHHCCCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCC----CC-------------HHHHHHHHHHHHHhCCCCEEEEECcc
Confidence 3466677777787788886433 322221 00 135667777888777777765 5543
No 131
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=28.30 E-value=1.9e+02 Score=21.65 Aligned_cols=59 Identities=8% Similarity=0.005 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe----ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc
Q 031422 25 NLATAERLVRAAHGKGANIILI----QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE 97 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~----PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~ 97 (160)
..+...+.++.+++.++|++-+ |+.+..+|. .. ....+..|++.+++.|+.++......
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~---------gl-----g~egl~~l~~~~~e~Gl~~~te~~d~ 180 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQ---------GL-----GEKGLEYLREAADKYGMYVVTEALGE 180 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCC---------CC-----THHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhc---------CC-----CHHHHHHHHHHHHHcCCcEEEEeCCH
Confidence 4677888888888899999766 444221211 00 13677888999999999998865543
No 132
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=27.87 E-value=1.6e+02 Score=20.80 Aligned_cols=52 Identities=17% Similarity=0.042 Sum_probs=32.1
Q ss_pred HHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 031422 30 ERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (160)
Q Consensus 30 ~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g 93 (160)
.+.+++|.+.++|+|+.-.-.+-. . ...........+....+.+++|.+...
T Consensus 49 ~~vi~eAi~~gadlIitHHP~~f~--~----------~~~~~~~~~~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 49 EETVAEAIEKGVDLIIVKHAPIFR--P----------IKDLLASRPQNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp HHHHHHHHHTTCSEEEESSCSCCS--C----------CCCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHCCCCEEEECCccccC--C----------ccccccCchHHHHHHHHHHCCCeEEEe
Confidence 456788889999999998854311 0 000111234455566667788888764
No 133
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=27.42 E-value=85 Score=23.14 Aligned_cols=54 Identities=13% Similarity=0.178 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 26 LATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
.++..++.+.|.+.|+|-++. |=++.. . .+....+.++.++...+++|++ ..|.
T Consensus 115 t~eai~la~~A~~~Gadavlv~~P~Y~~----~-------------s~~~l~~~f~~VA~a~~lPiilYn~P~ 170 (332)
T 2r8w_A 115 TDEAVALAKDAEAAGADALLLAPVSYTP----L-------------TQEEAYHHFAAVAGATALPLAIYNNPT 170 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSC----C-------------CHHHHHHHHHHHHHHCSSCEEEECCHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCC----C-------------CHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 456667777777778886543 322211 0 0135667788888887888766 5554
No 134
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=27.25 E-value=89 Score=22.63 Aligned_cols=55 Identities=11% Similarity=0.133 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcC-cEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELG-VVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~-i~i~~-g~~~ 96 (160)
+.+...++.+.|.+.|+|-++. |=++..+ .+....+.++.++...+ +++++ ..|.
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~-----------------s~~~l~~~f~~va~a~~~lPiilYn~P~ 148 (303)
T 2wkj_A 91 STAESQQLAASAKRYGFDAVSAVTPFYYPF-----------------SFEEHCDHYRAIIDSADGLPMVVYNIPA 148 (303)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCC-----------------CHHHHHHHHHHHHHHHTTCCEEEEECHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEecCCCCCCC-----------------CHHHHHHHHHHHHHhCCCCCEEEEeCcc
Confidence 3466677777787788886433 3222210 01356677777777766 77765 5543
No 135
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=26.90 E-value=15 Score=26.43 Aligned_cols=81 Identities=14% Similarity=0.187 Sum_probs=44.8
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecc---cccccccc-c----c-------------c------hhhHhhhc
Q 031422 15 QFACTDDVSTNLATAERLVRAAHGKGANIILIQE---LFEGYYFC-Q----A-------------Q------REDFFQRA 67 (160)
Q Consensus 15 Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE---~~~~g~~~-~----~-------------~------~~~~~~~~ 67 (160)
|+++..|.+..-..+.+-++.+.+.|+|+|..|+ ++-.|+.. . . + ..++++..
T Consensus 63 QF~~~EDl~~YPRtle~D~~ll~~~gvD~vF~P~~~emYP~g~~t~~v~~~~l~~~LeG~~RPgHF~GV~TVV~KLfniv 142 (264)
T 3n8h_A 63 QFNNPNDYQTYPNQLQQDIQILASLDVDVLFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGMLTVVLKLLQIT 142 (264)
T ss_dssp GCSCHHHHHHSCCCHHHHHHHHHHTTCSEEECCCHHHHCTTCSCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcCCCCHHHHHHHHHHCCCCEEECCCHHHcCCCCCceEEEeCCccccccCCCCCccHHHHHHHHHHHHHhhc
Confidence 3333334444444566667777788999999996 44444321 0 0 0 12344443
Q ss_pred ccC------CCChHHHHHHHHHHHcCcEEEe-ccc
Q 031422 68 KPY------KDHPTILKMQELAKELGVVMPV-SFF 95 (160)
Q Consensus 68 ~~~------~~~~~~~~l~~~a~~~~i~i~~-g~~ 95 (160)
.|. -+..-+..++++.++.++.+-+ |.|
T Consensus 143 ~Pd~A~FGeKD~QQl~vIrrmV~DL~~pv~Iv~~P 177 (264)
T 3n8h_A 143 KPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCP 177 (264)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCCeEEEchhHHHHHHHHHHHHHHhCCCceEEEEC
Confidence 331 1234455678888888877633 655
No 136
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=26.89 E-value=17 Score=26.49 Aligned_cols=34 Identities=24% Similarity=0.474 Sum_probs=23.5
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecc
Q 031422 15 QFACTDDVSTNLATAERLVRAAHGKGANIILIQE 48 (160)
Q Consensus 15 Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE 48 (160)
|+++..|.+..-..+.+-++.+.+.|+|+|..|+
T Consensus 63 QF~~~EDl~~YPRtle~D~~ll~~~gvD~vF~P~ 96 (285)
T 3mxt_A 63 QFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPD 96 (285)
T ss_dssp GCCTTSCTTTSCCCHHHHHHHHHHTTCSEEECCC
T ss_pred ccCCchhhhcCCCCHHHHHHHHHHCCCCEEECCC
Confidence 5555455555555566666667778999999997
No 137
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=26.55 E-value=76 Score=21.90 Aligned_cols=22 Identities=23% Similarity=0.238 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCCcEEEecc
Q 031422 27 ATAERLVRAAHGKGANIILIQE 48 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE 48 (160)
+.+.+.++.|+.-|++.|+++-
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEec
Confidence 6677888888888998887753
No 138
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=26.54 E-value=17 Score=26.93 Aligned_cols=81 Identities=12% Similarity=0.235 Sum_probs=46.6
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEeccc---cccccccc----c-------------c------hhhHhhhcc
Q 031422 15 QFACTDDVSTNLATAERLVRAAHGKGANIILIQEL---FEGYYFCQ----A-------------Q------REDFFQRAK 68 (160)
Q Consensus 15 Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~---~~~g~~~~----~-------------~------~~~~~~~~~ 68 (160)
|+.+..|.+..-..+.+-++.+.+.|+|+|..|+. +-.|+... . + ..++++...
T Consensus 82 QF~~~EDl~~YPRtle~D~~ll~~~GvD~vF~P~~~emYP~g~~t~V~v~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~ 161 (314)
T 3inn_A 82 QFGANEDLGRYPRDLERDAGLLHDAQVDYLFAPTVSDMYPRPMQTVVDVPPLGNQIEGEARPGHFAGVATVVSKLFNIVG 161 (314)
T ss_dssp GSCTTSSTTTCCCCHHHHHHHHHHTTCSEEECCCHHHHCSSCCCCEEECHHHHSSTHHHHSTTHHHHHHHHHHHHHHHHC
T ss_pred hcCCCccccccCCCHHHHHHHHHhCCCCEEECCCHHHcCCCCCeeEEEcCCcccccCCCCCcchhhhHHHHHHHHHhccC
Confidence 44444555555556666677777789999999974 33333100 0 0 113333333
Q ss_pred cC------CCChHHHHHHHHHHHcCcEEEe-ccc
Q 031422 69 PY------KDHPTILKMQELAKELGVVMPV-SFF 95 (160)
Q Consensus 69 ~~------~~~~~~~~l~~~a~~~~i~i~~-g~~ 95 (160)
|. -+..-+..++++.++.++.+-+ |.|
T Consensus 162 Pd~A~FGeKD~QQl~vIrrmV~DL~~pVeIv~~P 195 (314)
T 3inn_A 162 PDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVE 195 (314)
T ss_dssp CSEEEEETTSHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCEEEECccHHHHHHHHHHHHHHcCCceEEEecC
Confidence 31 1234556789999998877633 665
No 139
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=26.51 E-value=1.1e+02 Score=18.27 Aligned_cols=44 Identities=11% Similarity=0.140 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHH---cCcEEEeccccccCCeeeEEEEEEcCCCCEeEEee
Q 031422 74 PTILKMQELAKE---LGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 74 ~~~~~l~~~a~~---~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 120 (160)
.-++.+.+.+++ .|+.+..+......+ -.+++.+|+|..+..+.
T Consensus 84 ~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g---~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 84 EDVDKLFNEWTKQKSHQIIVIKEPYTDVFG---RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp HHHHHHHHHHHHCSSSCCEEEEEEEEETTE---EEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHHhhhcCCCEEeeCCcccCce---EEEEEECCCCCEEEEEe
Confidence 346777777788 888887543222222 45788899999876654
No 140
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=26.36 E-value=80 Score=23.41 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-ccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFF 95 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~ 95 (160)
++++..++.+.|.+.|+|-++. |=++... . +....+.++.++...+++|++ ..|
T Consensus 111 st~eai~la~~A~~~Gadavlv~~P~Y~~~-s----------------~~~l~~~f~~VA~a~~lPiilYn~P 166 (343)
T 2v9d_A 111 NARETIELSQHAQQAGADGIVVINPYYWKV-S----------------EANLIRYFEQVADSVTLPVMLYNFP 166 (343)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCSSSCC-C----------------HHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCC-C----------------HHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 3566677778887788886433 3222210 0 124556666666666666655 444
No 141
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=26.30 E-value=1.8e+02 Score=20.83 Aligned_cols=59 Identities=8% Similarity=0.062 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe----ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc
Q 031422 25 NLATAERLVRAAHGKGANIILI----QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE 97 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~----PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~ 97 (160)
..+...+.++.+++.++|++-+ |+.+..+|. .. ....+..+++.+++.|+.++......
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~---------g~-----g~~gl~~l~~~~~~~Gl~~~te~~d~ 112 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQ---------GL-----GLEGLKLLRRAGDEAGLPVVTEVLDP 112 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCC---------CC-----THHHHHHHHHHHHHHTCCEEEECCCG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhc---------CC-----CHHHHHHHHHHHHHcCCcEEEecCCH
Confidence 4567777788888889999766 444222211 00 13667788888999999988765543
No 142
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=26.29 E-value=1.1e+02 Score=22.18 Aligned_cols=57 Identities=9% Similarity=0.058 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++..+.+ .+....+.++.++...++++++ ..|.
T Consensus 94 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~---------------s~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (307)
T 3s5o_A 94 STQATVEMTVSMAQVGADAAMVVTPCYYRGRM---------------SSAALIHHYTKVADLSPIPVVLYSVPA 152 (307)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCTTGGGC---------------CHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCC---------------CHHHHHHHHHHHHhhcCCCEEEEeCCc
Confidence 4566778888888889997654 322221000 0136677788888877787766 5553
No 143
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=26.26 E-value=62 Score=23.70 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe--ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI--QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~--PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++..+. .+....+.++.++...++++++ ..|.
T Consensus 91 ~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~----------------~~~~l~~~f~~ia~a~~lPiilYn~P~ 149 (318)
T 3qfe_A 91 STRQVLEHINDASVAGANYVLVLPPAYFGKAT----------------TPPVIKSFFDDVSCQSPLPVVIYNFPG 149 (318)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCC---CC----------------CHHHHHHHHHHHHHHCSSCEEEEECCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCcccCCCC----------------CHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 4566777778887888885443 32221000 1135666777777777777765 4443
No 144
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=26.10 E-value=47 Score=25.04 Aligned_cols=67 Identities=12% Similarity=0.225 Sum_probs=37.7
Q ss_pred HHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-cCCeeeEEEEEEcCCCC
Q 031422 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-ANNAHYNSIAIIDADGS 114 (160)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~~~~~~Ns~~~i~~~G~ 114 (160)
|-..+++++++=|-+.. ... .. ....++.|+++.++.++.+++-.... .-.++.+..+++ .+|+
T Consensus 177 AL~~~P~lLLlDEPTs~-LD~---------~~----~~~i~~lL~~l~~~~g~Tii~vTHdl~~~~~~aDrv~vl-~~G~ 241 (366)
T 3tui_C 177 ALASNPKVLLCDQATSA-LDP---------AT----TRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVI-SNGE 241 (366)
T ss_dssp HTTTCCSEEEEESTTTT-SCH---------HH----HHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEE-ETTE
T ss_pred HHhcCCCEEEEECCCcc-CCH---------HH----HHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEE-ECCE
Confidence 33357888888885441 110 00 13566778888888787776643321 112344556666 3677
Q ss_pred EeE
Q 031422 115 DLG 117 (160)
Q Consensus 115 i~~ 117 (160)
++.
T Consensus 242 iv~ 244 (366)
T 3tui_C 242 LIE 244 (366)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 145
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=26.07 E-value=82 Score=22.76 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccc
Q 031422 23 STNLATAERLVRAAHGKGANIILIQELF 50 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~PE~~ 50 (160)
+...++++..++.|+.+|.+-||||-..
T Consensus 194 ~~l~~rir~vL~iA~~~g~~~LVLGA~G 221 (277)
T 3sig_A 194 RVLRGRAAKVLAAARHHGHRRLVLGAWG 221 (277)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 3456788899999999999999999864
No 146
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=25.95 E-value=65 Score=21.06 Aligned_cols=23 Identities=17% Similarity=0.212 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhCCCcEEEeccc
Q 031422 27 ATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
+.+.+.++++.+.++|+|+.-=.
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG 75 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGG 75 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHHhCCCCEEEECCC
Confidence 66777777776668999986543
No 147
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.83 E-value=1e+02 Score=21.89 Aligned_cols=42 Identities=14% Similarity=0.238 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 29 AERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 29 ~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+.++++.+++.|+|=++.|-+- .+..+.+.+.++++++..+.
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP----------------------~eE~~~~~~~~~~~Gl~~I~ 146 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELS----------------------FEESDDLIKECERYNIALIT 146 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCC----------------------GGGCHHHHHHHHHTTCEECE
T ss_pred HHHHHHHHHHcCCCEEEeCCCC----------------------HHHHHHHHHHHHHcCCeEEE
Confidence 3445555556666666666631 12235678888888876543
No 148
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=25.80 E-value=1.1e+02 Score=22.52 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHH
Q 031422 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 85 (160)
+.+.+.++...+.|+|.|.+.+.+.+-.. .+.+.+... ++.+.+.+..++
T Consensus 187 ~~~~~~~~~~~~aGad~i~i~d~~~~~ls----p~~f~ef~~-----p~~k~i~~~i~~ 236 (354)
T 3cyv_A 187 KSVTLYLNAQIKAGAQAVMIFDTWGGVLT----GRDYQQFSL-----YYMHKIVDGLLR 236 (354)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECTTGGGSC----HHHHHHHTH-----HHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCccccCC----HHHHHHHhH-----HHHHHHHHHHHH
Confidence 34444555566789999988886543111 233455554 444555554443
No 149
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=25.78 E-value=1.5e+02 Score=21.33 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++.. . .+....+.++.++...++++++ ..|.
T Consensus 87 ~t~~ai~la~~a~~~Gadavlv~~P~y~~----~-------------~~~~l~~~f~~va~a~~lPiilYn~P~ 143 (297)
T 3flu_A 87 NTVEAIALSQAAEKAGADYTLSVVPYYNK----P-------------SQEGIYQHFKTIAEATSIPMIIYNVPG 143 (297)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSC----C-------------CHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCC----C-------------CHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 3566777888888889987543 222211 0 0135667788888887888766 5554
No 150
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=25.71 E-value=1.4e+02 Score=19.32 Aligned_cols=26 Identities=15% Similarity=0.192 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEe
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILI 46 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~ 46 (160)
.+...+..+.++.++-.+.++.+|..
T Consensus 62 ~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 62 YTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp THHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 46667777777777766667777766
No 151
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=25.71 E-value=1.5e+02 Score=21.43 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++.-= +.|... .+....+.+++++...++++++ ..|.
T Consensus 88 ~t~~ai~la~~a~~~Gadavlv~~---P~y~~~-------------s~~~l~~~f~~va~a~~lPiilYn~P~ 144 (301)
T 3m5v_A 88 ATHEAVGLAKFAKEHGADGILSVA---PYYNKP-------------TQQGLYEHYKAIAQSVDIPVLLYNVPG 144 (301)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEC---CCSSCC-------------CHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcC---CCCCCC-------------CHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 356777888888888888754321 111110 0135666777777777777765 4443
No 152
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.66 E-value=1.5e+02 Score=21.61 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++.. . .+....+.++.++...++++++ ..|.
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P~y~~----~-------------s~~~l~~~f~~va~a~~lPiilYn~P~ 159 (314)
T 3qze_A 103 STREAVALTEAAKSGGADACLLVTPYYNK----P-------------TQEGMYQHFRHIAEAVAIPQILYNVPG 159 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSC----C-------------CHHHHHHHHHHHHHHSCSCEEEEECHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCC----C-------------CHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 3566777888888888887543 222111 0 0135667788888877888766 5553
No 153
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=25.37 E-value=70 Score=23.01 Aligned_cols=55 Identities=11% Similarity=0.074 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEE-eccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIIL-IQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv-~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++ .|=++... .+....+.++.++...++++++ ..|.
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~-----------------s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (292)
T 2ojp_A 81 ATAEAISLTQRFNDSGIVGCLTVTPYYNRP-----------------SQEGLYQHFKAIAEHTDLPQILYNVPS 137 (292)
T ss_dssp SHHHHHHHHHHTTTSSCSEEEEECCCSSCC-----------------CHHHHHHHHHHHHTTCSSCEEEECCHH
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------CHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 356677788888888998643 33322210 0135666677777766777655 5443
No 154
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=25.31 E-value=95 Score=21.70 Aligned_cols=25 Identities=16% Similarity=0.082 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 23 STNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
+..++.+++.++.|+.-|++.|+.|
T Consensus 109 ~~~~~~~~~~i~~A~~lG~~~v~~~ 133 (290)
T 2zvr_A 109 KKAIERVVKHTEVAGMFGALVIIGL 133 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEESG
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEec
Confidence 5567889999999999999999833
No 155
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=25.27 E-value=97 Score=18.63 Aligned_cols=18 Identities=6% Similarity=-0.067 Sum_probs=8.9
Q ss_pred CCCCCCcccEEEEEeCCC
Q 031422 1 MEKGKRREVVVSALQFAC 18 (160)
Q Consensus 1 ~~~~~~~~~~va~~Q~~~ 18 (160)
|+...++.++|.++--+.
T Consensus 1 M~~~~~~~~~iLivd~~~ 18 (147)
T 2zay_A 1 MSLAEGKWWRIMLVDTQL 18 (147)
T ss_dssp -------CEEEEEECTTG
T ss_pred CCcccCCCceEEEEeCCH
Confidence 566666778899988765
No 156
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=25.02 E-value=1.9e+02 Score=20.97 Aligned_cols=19 Identities=21% Similarity=0.249 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 031422 74 PTILKMQELAKELGVVMPV 92 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~ 92 (160)
..++.|.++++++++.+++
T Consensus 182 ~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 182 DELEIMADLCERHGVRVIS 200 (390)
T ss_dssp THHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 5778899999999999987
No 157
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=24.83 E-value=1.8e+02 Score=20.24 Aligned_cols=66 Identities=14% Similarity=0.156 Sum_probs=36.5
Q ss_pred HHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-cCCeeeEEEEEEcCCCC
Q 031422 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-ANNAHYNSIAIIDADGS 114 (160)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~~~~~~Ns~~~i~~~G~ 114 (160)
|--.+++++++=|-+.. ... .. .....+.|+++.++ +..+++..... .-.++.+..+++ .+|+
T Consensus 167 aL~~~p~lllLDEPts~-LD~---------~~----~~~l~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l-~~G~ 230 (257)
T 1g6h_A 167 ALMTNPKMIVMDEPIAG-VAP---------GL----AHDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVM-FNGQ 230 (257)
T ss_dssp HHHTCCSEEEEESTTTT-CCH---------HH----HHHHHHHHHHHHHT-TCEEEEECSCCSTTGGGCSEEEEE-ETTE
T ss_pred HHHcCCCEEEEeCCccC-CCH---------HH----HHHHHHHHHHHHHC-CCEEEEEecCHHHHHHhCCEEEEE-ECCE
Confidence 34468999999995442 110 00 12455667777655 66655533322 223455667777 4687
Q ss_pred EeE
Q 031422 115 DLG 117 (160)
Q Consensus 115 i~~ 117 (160)
++.
T Consensus 231 i~~ 233 (257)
T 1g6h_A 231 IIA 233 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 158
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=24.66 E-value=1.9e+02 Score=20.63 Aligned_cols=19 Identities=16% Similarity=0.150 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 031422 74 PTILKMQELAKELGVVMPV 92 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~ 92 (160)
..+..+.++++++++.+++
T Consensus 170 ~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4678889999999999987
No 159
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=24.61 E-value=1.4e+02 Score=19.08 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=41.0
Q ss_pred EEEEEeCCC---C-----CCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHH
Q 031422 10 VVSALQFAC---T-----DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQE 81 (160)
Q Consensus 10 ~va~~Q~~~---~-----~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 81 (160)
.+.++++.. . .+.+...+.+.++++.+.+.++.+++.--.-.... .+.... ..... ...+-+.+++
T Consensus 76 d~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~---~~~~~~-~~~~~--~~~~n~~l~~ 149 (204)
T 3p94_A 76 KAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDF---PWRPGM-QPADK--VIQLNKWIKE 149 (204)
T ss_dssp EEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCB---TTBTTC-CCHHH--HHHHHHHHHH
T ss_pred CEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCC---CCCccc-cHHHH--HHHHHHHHHH
Confidence 566666643 1 24566666677777776667889887732211111 110000 00000 0245567888
Q ss_pred HHHHcCcEEE
Q 031422 82 LAKELGVVMP 91 (160)
Q Consensus 82 ~a~~~~i~i~ 91 (160)
+++++++.++
T Consensus 150 ~a~~~~v~~i 159 (204)
T 3p94_A 150 YADKNGLTYV 159 (204)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHcCCcEE
Confidence 8999888775
No 160
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=24.42 E-value=1.3e+02 Score=18.67 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=23.3
Q ss_pred HHHHHHHHcCcEEEeccccccCCee----eEEEEEEcCCCCEeEEee
Q 031422 78 KMQELAKELGVVMPVSFFEEANNAH----YNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 78 ~l~~~a~~~~i~i~~g~~~~~~~~~----~Ns~~~i~~~G~i~~~y~ 120 (160)
...++++.+++...-. .....+.+ ..+.++++++|.++.+|.
T Consensus 102 ~~~~~~~~~~v~~~p~-~~~~~~~~~~~~~~~~~lid~~G~i~~~~~ 147 (171)
T 2rli_A 102 QVAQASHSYRVYYNAG-PKDEDQDYIVDHSIAIYLLNPDGLFTDYYG 147 (171)
T ss_dssp HHHHHHHHSCCCCEEC-CCCSSCCCCEECCCEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHhCeEEEec-CCCCCCCeEEeccceEEEECCCCeEEEEEC
Confidence 4456677777643321 01111111 126899999999886654
No 161
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=24.19 E-value=1.7e+02 Score=19.97 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=11.1
Q ss_pred HHHHHHHHHcCcEEEecc
Q 031422 77 LKMQELAKELGVVMPVSF 94 (160)
Q Consensus 77 ~~l~~~a~~~~i~i~~g~ 94 (160)
..+.+.+++++..++.+.
T Consensus 123 ~~~~~~~~~~g~~~~~~i 140 (248)
T 1geq_A 123 KEFTEIAREEGIKTVFLA 140 (248)
T ss_dssp HHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEE
Confidence 455666667776665553
No 162
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=24.06 E-value=1.5e+02 Score=21.54 Aligned_cols=19 Identities=5% Similarity=0.186 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 031422 74 PTILKMQELAKELGVVMPV 92 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~ 92 (160)
..++.+.++++++++.+++
T Consensus 184 ~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 5678899999999999987
No 163
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=24.05 E-value=1.4e+02 Score=18.65 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=29.6
Q ss_pred ccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCc-EEEecc
Q 031422 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGAN-IILIQE 48 (160)
Q Consensus 8 ~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~~~d-lvv~PE 48 (160)
++.+|++..+. ..+.+..+++....+..|+..+-. +.++.+
T Consensus 120 ~~siGia~~~~~~~~~~~ll~~A~~Al~~ak~~g~~~~~~~~~ 162 (171)
T 3icl_A 120 SVSIGIAVSPADGETMEQLLRNADTAMYHAKSRGKNNYQFFSP 162 (171)
T ss_dssp CEEEEEEETTTTCSSHHHHHHHHHHHHHHHHHHCSSEEEECCC
T ss_pred EEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcC
Confidence 46778887655 467888899999999999876544 444444
No 164
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=23.93 E-value=1.5e+02 Score=19.06 Aligned_cols=21 Identities=5% Similarity=0.162 Sum_probs=16.1
Q ss_pred ChH--HHHHHHHHHHcCcEEEec
Q 031422 73 HPT--ILKMQELAKELGVVMPVS 93 (160)
Q Consensus 73 ~~~--~~~l~~~a~~~~i~i~~g 93 (160)
.+. ++.+.+.++++++.+.+|
T Consensus 159 ~e~~~l~~~~~~~~~~g~~~~i~ 181 (182)
T 3can_A 159 PSEEVQQQCIQILTDYGLKATIG 181 (182)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHcCCceEeC
Confidence 355 788899999998877653
No 165
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis}
Probab=23.90 E-value=44 Score=22.79 Aligned_cols=24 Identities=17% Similarity=0.105 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEecccc
Q 031422 24 TNLATAERLVRAAHGKGANIILIQELF 50 (160)
Q Consensus 24 ~n~~~~~~~i~~a~~~~~dlvv~PE~~ 50 (160)
...+.+.+.|+. .++|+|+|.|..
T Consensus 22 ~r~~~i~~~i~~---~~~DIv~LQEv~ 45 (257)
T 3l1w_A 22 FRKEAVCQLINF---HDWSLCCIQEVR 45 (257)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEEEEC
T ss_pred HHHHHHHHHHHH---cCCCEEEEeCCC
Confidence 344455555554 489999999963
No 166
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=23.79 E-value=1.4e+02 Score=18.52 Aligned_cols=42 Identities=19% Similarity=0.123 Sum_probs=25.7
Q ss_pred HHHHHHHHHHcCcEEEeccccccCCeeeEEEEEEcCCCCEeEEee
Q 031422 76 ILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 76 ~~~l~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 120 (160)
++...+.+++.++.+...-.....++ .+++.||+|..+..+.
T Consensus 109 vda~~~~l~~~Gv~~~~~p~~~~~g~---~~~f~DPdGn~iel~q 150 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQEPTDMGPVV---TAILDDTCGNLIQLMQ 150 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECSSCE---EEEEECSSSCEEEEEE
T ss_pred hhhhhhHHhcCCcEEeeCCEEcCCeE---EEEEECCCCCEEEEEE
Confidence 44555556678887765422222332 3677899999876653
No 167
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.78 E-value=1.3e+02 Score=21.72 Aligned_cols=55 Identities=18% Similarity=0.144 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe--ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-ccccc
Q 031422 25 NLATAERLVRAAHGKGANIILI--QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFEE 97 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~--PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~~ 97 (160)
+.++..++.+.|.+.|+|-++. |=++-+ .+....+.++.++...++++++ ..|.+
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~------------------~~~~l~~~f~~va~a~~lPiilYn~P~~ 141 (300)
T 3eb2_A 84 SVADAVAQAKLYEKLGADGILAILEAYFPL------------------KDAQIESYFRAIADAVEIPVVIYTNPQF 141 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEECCSSCC------------------CHHHHHHHHHHHHHHCSSCEEEEECTTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCC------------------CHHHHHHHHHHHHHHCCCCEEEEECccc
Confidence 3566677778887778886443 322110 0135667788888887888766 55543
No 168
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=23.78 E-value=1.8e+02 Score=21.61 Aligned_cols=20 Identities=25% Similarity=0.297 Sum_probs=18.1
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.|.++++++++.+++
T Consensus 222 ~~~l~~l~~l~~~~~illI~ 241 (434)
T 3l44_A 222 PGFLEKVNELVHEAGALVIY 241 (434)
T ss_dssp TTHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 57899999999999999987
No 169
>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}
Probab=23.76 E-value=1.2e+02 Score=17.75 Aligned_cols=43 Identities=19% Similarity=0.074 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCcEEEeccccccCCeeeEEEEEEcCCCCEeEEee
Q 031422 76 ILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 76 ~~~l~~~a~~~~i~i~~g~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 120 (160)
++.+.+.+++.++.++.+......+. -.+++.+|+|..+..+.
T Consensus 90 ~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~DP~G~~~el~e 132 (133)
T 4hc5_A 90 IDEAYKTLTERGVTFTKPPEMMPWGQ--RATWFSDPDGNQFFLVE 132 (133)
T ss_dssp HHHHHHHHHHTTCEESSSCEECTTSC--EEEEEECTTCEEEEEEE
T ss_pred HHHHHHHHHHCCCEeecCCCcCCCCC--EEEEEECCCCCEEEEEe
Confidence 55566666777887754322222232 45778899998776543
No 170
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=23.67 E-value=1.8e+02 Score=20.79 Aligned_cols=44 Identities=23% Similarity=0.156 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCCcE-EEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 28 TAERLVRAAHGKGANI-ILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 28 ~~~~~i~~a~~~~~dl-vv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
...+.++++.+.|..+ |++++ |+. ....+.+.+.+++.++.++.
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~----G~~-----------------~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITE----GIP-----------------TLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCC----CCC-----------------HHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEECC----CCC-----------------HHHHHHHHHHHHHcCCEEEe
Confidence 4456677777778885 55666 332 02235788899999998764
No 171
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=23.62 E-value=2e+02 Score=20.43 Aligned_cols=41 Identities=12% Similarity=0.093 Sum_probs=26.9
Q ss_pred cccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 7 ~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
+++||+++=...+...+-.+..-...++.+.+.|.+++++-
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~ 52 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFD 52 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEe
Confidence 35789999887765555555555566666666676666554
No 172
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=23.61 E-value=1.3e+02 Score=22.18 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 031422 74 PTILKMQELAKELGVVMPV 92 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~ 92 (160)
..++.+.++++++++++++
T Consensus 192 ~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 192 DFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 5678899999999999987
No 173
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=23.54 E-value=2.1e+02 Score=20.52 Aligned_cols=19 Identities=16% Similarity=0.329 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 031422 74 PTILKMQELAKELGVVMPV 92 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~ 92 (160)
..+..+.++++++++.+++
T Consensus 176 ~~l~~l~~~~~~~~~~li~ 194 (383)
T 3kax_A 176 EELTKLGSLCTKYNVIVVA 194 (383)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 5677888889999999987
No 174
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=23.52 E-value=1.4e+02 Score=18.43 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=24.3
Q ss_pred HHHHHHHHHcCcEEEeccccccCCee----eEEEEEEcCCCCEeEEee
Q 031422 77 LKMQELAKELGVVMPVSFFEEANNAH----YNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 77 ~~l~~~a~~~~i~i~~g~~~~~~~~~----~Ns~~~i~~~G~i~~~y~ 120 (160)
+...++++.+++...-.. ....+.+ -++.++++++|.++..|.
T Consensus 98 d~~~~~~~~~~v~~~p~~-~~~~~~~~~~~~~~~~lid~~G~i~~~~~ 144 (164)
T 2ggt_A 98 EEVDQVARAYRVYYSPGP-KDEDEDYIVDHTIIMYLIGPDGEFLDYFG 144 (164)
T ss_dssp HHHHHHHHTTTCCEEEEE-ECTTSCEEEEECCEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHhcCeEEEecC-CCCCCCeeEeccceEEEECCCCeEEEEeC
Confidence 445667777776543211 1111111 126899999999886664
No 175
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=23.49 E-value=2.5e+02 Score=21.39 Aligned_cols=62 Identities=18% Similarity=0.081 Sum_probs=35.0
Q ss_pred HHHHHHHHHHH-hCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cc
Q 031422 27 ATAERLVRAAH-GKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SF 94 (160)
Q Consensus 27 ~~~~~~i~~a~-~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~ 94 (160)
..+...++..+ +.++++||+=+..+.............+ -..+...|+.+|+++++.+++ +.
T Consensus 299 ~~i~~~~~~l~~~~~~~livID~l~~~~~~~~~~~~~~~~------i~~i~~~Lk~lAke~~i~vi~~sq 362 (454)
T 2r6a_A 299 SDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQE------VSEISRSLKALARELEVPVIALSQ 362 (454)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEECGGGSCCSCC----CHHH------HHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccHHHhccCCCCCCCHHHH------HHHHHHHHHHHHHHhCCeEEEEec
Confidence 33444444433 4589999999986642111000000011 135667899999999988876 44
No 176
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=23.28 E-value=1.9e+02 Score=21.34 Aligned_cols=52 Identities=6% Similarity=-0.013 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHh--CCCcEEEeccccc-cccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 26 LATAERLVRAAHG--KGANIILIQELFE-GYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 26 ~~~~~~~i~~a~~--~~~dlvv~PE~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.+.+.+.++.... .++.+|+++.... +|.. . +...++.+.++++++++.+++
T Consensus 172 ~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~------------~---~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 172 SKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT------------L---DKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC------------C---CHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc------------C---CHHHHHHHHHHHHHCCeEEEE
Confidence 4556666654322 2577777766433 2221 1 235678889999999999887
No 177
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=23.17 E-value=48 Score=20.83 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEeccccc
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQELFE 51 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~ 51 (160)
+.+...++....+..|.+-|+.+.+.||--.
T Consensus 66 ~~~d~~~Na~~ais~ArklG~~~~l~pEDIv 96 (124)
T 1wjo_A 66 TEDDKHNNAKYAVSMARRIGARVYALPEDLV 96 (124)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCSCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCcccCHHHHh
Confidence 4567777888888888788999999999543
No 178
>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1
Probab=23.16 E-value=37 Score=23.23 Aligned_cols=24 Identities=21% Similarity=0.144 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEecccccc
Q 031422 26 LATAERLVRAAHGKGANIILIQELFEG 52 (160)
Q Consensus 26 ~~~~~~~i~~a~~~~~dlvv~PE~~~~ 52 (160)
.+++.+.++ +.++|+|+|.|....
T Consensus 15 ~~~i~~~i~---~~~~Dii~LQE~~~~ 38 (268)
T 1ako_A 15 PHQLEAIVE---KHQPDVIGLQETKVH 38 (268)
T ss_dssp HHHHHHHHH---HHCCSEEEEECCCCC
T ss_pred HHHHHHHHH---HcCCCEEEEEeccCC
Confidence 344555554 458999999998553
No 179
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=22.97 E-value=84 Score=20.61 Aligned_cols=40 Identities=13% Similarity=0.022 Sum_probs=22.0
Q ss_pred CCcccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEe
Q 031422 5 KRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILI 46 (160)
Q Consensus 5 ~~~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~ 46 (160)
|+.+|||.++-..+..+ .|.+++.+.+.+..+.+.++-++
T Consensus 3 m~~~Mkilii~gS~r~~--g~t~~la~~i~~~l~~g~~v~~~ 42 (193)
T 1rtt_A 3 LSDDIKVLGISGSLRSG--SYNSAALQEAIGLVPPGMSIELA 42 (193)
T ss_dssp ----CEEEEEESCCSTT--CHHHHHHHHHHTTCCTTCEEEEC
T ss_pred CCCCceEEEEECCCCCC--ChHHHHHHHHHHhccCCCeEEEE
Confidence 44557898888776422 46666666665543345565443
No 180
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=22.89 E-value=2.2e+02 Score=21.36 Aligned_cols=30 Identities=13% Similarity=0.036 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 031422 20 DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 20 ~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
.+.+++++.+.+.++.|++.+.++.+-+|.
T Consensus 121 ~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed 150 (370)
T 3rmj_A 121 MKPKQVIEAAVKAVKIAREYTDDVEFSCED 150 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCSCEEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEecCC
Confidence 467888999999999999989888888884
No 181
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=22.75 E-value=2.1e+02 Score=21.41 Aligned_cols=20 Identities=25% Similarity=0.318 Sum_probs=18.0
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.++++++++++.++.
T Consensus 231 ~~~l~~l~~l~~~~~~~lI~ 250 (448)
T 3dod_A 231 EGYLAGVRELCTTYDVLMIV 250 (448)
T ss_dssp TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCEEEE
Confidence 47889999999999999986
No 182
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=22.73 E-value=1.6e+02 Score=18.98 Aligned_cols=18 Identities=0% Similarity=-0.182 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHcCcEEE
Q 031422 74 PTILKMQELAKELGVVMP 91 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~ 91 (160)
.+-+.++++|+++++.++
T Consensus 140 ~~n~~~~~~a~~~~v~~i 157 (200)
T 4h08_A 140 VRNQIALKHINRASIEVN 157 (200)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhhhcceEEE
Confidence 345677888999998875
No 183
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=22.62 E-value=2.2e+02 Score=20.46 Aligned_cols=55 Identities=20% Similarity=0.077 Sum_probs=32.7
Q ss_pred CCCcccEEEEEeCCC-C-CC--HHHHHHHHHHHHHHHHhCCCcEEE-ecccccccccccc
Q 031422 4 GKRREVVVSALQFAC-T-DD--VSTNLATAERLVRAAHGKGANIIL-IQELFEGYYFCQA 58 (160)
Q Consensus 4 ~~~~~~~va~~Q~~~-~-~~--~~~n~~~~~~~i~~a~~~~~dlvv-~PE~~~~g~~~~~ 58 (160)
++.++.--+++...+ + .| .-.+.+...+..++..++|||+|= =.|.+-+|...-+
T Consensus 3 sl~r~~iMGIlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs 62 (270)
T 4hb7_A 3 AMTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVT 62 (270)
T ss_dssp --CCCEEEEEEECC----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCC
T ss_pred CCCCCeEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCc
Confidence 455665668888877 1 22 233556666777777789999984 4677777665443
No 184
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=22.58 E-value=2.4e+02 Score=20.96 Aligned_cols=65 Identities=11% Similarity=0.158 Sum_probs=34.5
Q ss_pred hCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-cCCeeeEEEEEEcCCCCEe
Q 031422 38 GKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-ANNAHYNSIAIIDADGSDL 116 (160)
Q Consensus 38 ~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~~~~~~Ns~~~i~~~G~i~ 116 (160)
-.+++++++=|-+. +.+ ... .....+.|+++.++.++.+++-.... .-..+.+..+++ .+|+++
T Consensus 161 ~~~P~lLLLDEP~s-~LD---------~~~----r~~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~~G~i~ 225 (355)
T 1z47_A 161 APRPQVLLFDEPFA-AID---------TQI----RRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVL-HEGNVE 225 (355)
T ss_dssp TTCCSEEEEESTTC-CSS---------HHH----HHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHCSEEEEE-ETTEEE
T ss_pred HcCCCEEEEeCCcc-cCC---------HHH----HHHHHHHHHHHHHhcCCEEEEECCCHHHHHHhCCEEEEE-ECCEEE
Confidence 35788888888533 111 000 12555677777777777666532221 112334455666 357665
Q ss_pred E
Q 031422 117 G 117 (160)
Q Consensus 117 ~ 117 (160)
.
T Consensus 226 ~ 226 (355)
T 1z47_A 226 Q 226 (355)
T ss_dssp E
T ss_pred E
Confidence 3
No 185
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=22.44 E-value=77 Score=18.59 Aligned_cols=18 Identities=28% Similarity=0.370 Sum_probs=13.9
Q ss_pred eEEEEEEcCCCCEeEEee
Q 031422 103 YNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 103 ~Ns~~~i~~~G~i~~~y~ 120 (160)
+-+.++++++|+++..+.
T Consensus 105 ~P~~~lid~~G~i~~~~~ 122 (138)
T 4evm_A 105 YPTQAFIDKEGKLVKTHP 122 (138)
T ss_dssp SSEEEEECTTCCEEEEEE
T ss_pred CCeEEEECCCCcEEEeec
Confidence 456889999999876554
No 186
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=22.43 E-value=86 Score=22.74 Aligned_cols=21 Identities=33% Similarity=0.400 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHhCCCcEEE
Q 031422 25 NLATAERLVRAAHGKGANIIL 45 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv 45 (160)
++++..++.+.|.+.|+|-++
T Consensus 92 st~~ai~la~~A~~~Gadavl 112 (306)
T 1o5k_A 92 STEKTLKLVKQAEKLGANGVL 112 (306)
T ss_dssp CHHHHHHHHHHHHHHTCSEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEE
Confidence 346667777888777888643
No 187
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=22.41 E-value=2.1e+02 Score=20.25 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=35.6
Q ss_pred HHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcE--EEeccccccCCeeeEEEEEEcCCC
Q 031422 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV--MPVSFFEEANNAHYNSIAIIDADG 113 (160)
Q Consensus 36 a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~--i~~g~~~~~~~~~~Ns~~~i~~~G 113 (160)
|--.+++++++=|-+.. .. ... .....+.|+++.++..+. |+++.-...-.++.+..+++ .+|
T Consensus 175 aL~~~p~lLlLDEPts~-LD---------~~~----~~~l~~~l~~l~~~g~tv~~iivtHd~~~~~~~~d~v~~l-~~G 239 (279)
T 2ihy_A 175 ALMGQPQVLILDEPAAG-LD---------FIA----RESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLL-KDG 239 (279)
T ss_dssp HHHTCCSEEEEESTTTT-CC---------HHH----HHHHHHHHHHHHHHCTTCEEEEEESCGGGCCTTCCEEEEE-ETT
T ss_pred HHhCCCCEEEEeCCccc-cC---------HHH----HHHHHHHHHHHHHCCCEEEEEEEecCHHHHHHhCCEEEEE-ECC
Confidence 33457899999885441 11 001 124556677776653333 44443322223455667777 468
Q ss_pred CEeE
Q 031422 114 SDLG 117 (160)
Q Consensus 114 ~i~~ 117 (160)
+++.
T Consensus 240 ~i~~ 243 (279)
T 2ihy_A 240 QSIQ 243 (279)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7753
No 188
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=22.40 E-value=2.6e+02 Score=21.33 Aligned_cols=20 Identities=5% Similarity=0.200 Sum_probs=18.2
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.++++++++++.+++
T Consensus 243 ~~~l~~l~~l~~~~gillI~ 262 (472)
T 3hmu_A 243 DSYWPEIQRICDKYDILLIA 262 (472)
T ss_dssp TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 58899999999999999986
No 189
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=22.39 E-value=1.6e+02 Score=21.77 Aligned_cols=20 Identities=15% Similarity=0.373 Sum_probs=18.0
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.+.++++++++.+++
T Consensus 220 ~~~l~~l~~l~~~~~~lli~ 239 (429)
T 4e77_A 220 PEFLPGLRALCDEFGALLII 239 (429)
T ss_dssp TTHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 47799999999999999986
No 190
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=22.32 E-value=2.3e+02 Score=23.18 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 24 TNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 24 ~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.|.+..++.|+-|++.|-+-|++=|.|-.. ... + ...+.. ..-+..|.+.|++.|+-+++
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~-~~~----d---~~~~~p-~~di~~l~~Ya~~kgV~i~l 365 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILDEGWAVN-LQA----D---LMQVVK-EIDLKELVDYAASKNVGIIL 365 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECTTSBCT-TSC----C---TTCBCT-TCCHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccC-CCC----C---ccccCC-cCCHHHHHHHHHhcCCEEEE
Confidence 489999999999999999999998876531 101 1 111111 24577888889998888766
No 191
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=22.19 E-value=2.9e+02 Score=21.79 Aligned_cols=82 Identities=18% Similarity=0.072 Sum_probs=49.3
Q ss_pred CCCCcccEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHH
Q 031422 3 KGKRREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (160)
Q Consensus 3 ~~~~~~~~va~~Q~~~~~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (160)
++|...+++.+.=+--.-+...+.+...+-++.+++.|.+.|-++..|..--+. .+-.-+-..++.+.+.
T Consensus 5 ~~~~~~~~~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~----------g~G~ydf~~~d~~id~ 74 (516)
T 1vem_A 5 KGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKN----------GDQQFDFSYAQRFAQS 74 (516)
T ss_dssp CCCCTTCEEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCS----------STTCCCCHHHHHHHHH
T ss_pred cccCCCCCeEEEecccccCCCCCHHHHHHHHHHHHHcCCCEEEEecchhhccCC----------CCCccchHHHHHHHHH
Confidence 345555565532221111113455778888888888999999998865421110 0000124667788899
Q ss_pred HHHcCcEEE--ecc
Q 031422 83 AKELGVVMP--VSF 94 (160)
Q Consensus 83 a~~~~i~i~--~g~ 94 (160)
++++|+.++ ++.
T Consensus 75 a~~~GL~viv~L~~ 88 (516)
T 1vem_A 75 VKNAGMKMIPIIST 88 (516)
T ss_dssp HHHTTCEEEEEEEC
T ss_pred HHHCCCEEEEEecc
Confidence 999999998 554
No 192
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=22.17 E-value=2.4e+02 Score=20.83 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=35.3
Q ss_pred hCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEeccccc-cCCeeeEEEEEEcCCCCEe
Q 031422 38 GKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE-ANNAHYNSIAIIDADGSDL 116 (160)
Q Consensus 38 ~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~g~~~~-~~~~~~Ns~~~i~~~G~i~ 116 (160)
-.+++++++=|-+. +.. ... .....+.|+++.++.++.+++-.... .-..+.+..+++ .+|+++
T Consensus 143 ~~~P~lLLLDEP~s-~LD---------~~~----~~~l~~~l~~l~~~~g~tii~vTHd~~~~~~~adri~vl-~~G~i~ 207 (348)
T 3d31_A 143 VTNPKILLLDEPLS-ALD---------PRT----QENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVV-MDGKLI 207 (348)
T ss_dssp TSCCSEEEEESSST-TSC---------HHH----HHHHHHHHHHHHHHTTCEEEEEESCHHHHHHHCSEEEEE-SSSCEE
T ss_pred HcCCCEEEEECccc-cCC---------HHH----HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEE-ECCEEE
Confidence 34688888888433 111 000 12556677777777777666532221 112344556667 468775
Q ss_pred E
Q 031422 117 G 117 (160)
Q Consensus 117 ~ 117 (160)
.
T Consensus 208 ~ 208 (348)
T 3d31_A 208 Q 208 (348)
T ss_dssp E
T ss_pred E
Confidence 3
No 193
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=22.08 E-value=1.4e+02 Score=19.69 Aligned_cols=68 Identities=10% Similarity=-0.028 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHh-hh-cccCC----CChHHHHHHHHHHHcCcEEE
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF-QR-AKPYK----DHPTILKMQELAKELGVVMP 91 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~-~~-~~~~~----~~~~~~~l~~~a~~~~i~i~ 91 (160)
+.+...+.+.++++.+.+.++.+|+.-=... ....+..... .. ..... ...+.+.++++++++++.++
T Consensus 94 ~~~~~~~~l~~~i~~~~~~~~~vil~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~v~~v 167 (240)
T 3mil_A 94 PLPEFIDNIRQMVSLMKSYHIRPIIIGPGLV---DREKWEKEKSEEIALGYFRTNENFAIYSDALAKLANEEKVPFV 167 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCC---CHHHHHHHCHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEcCCCC---CchhhhhhccccccccccchHHHHHHHHHHHHHHHHHhCCeEE
Confidence 3455556666666666666888887542111 1110000000 00 00000 02555678888999888765
No 194
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=22.08 E-value=83 Score=20.11 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=11.5
Q ss_pred EEEEEcCCCCEeEEe
Q 031422 105 SIAIIDADGSDLGLY 119 (160)
Q Consensus 105 s~~~i~~~G~i~~~y 119 (160)
+.++|+++|.|...+
T Consensus 123 ~tflID~~G~I~~~~ 137 (164)
T 4gqc_A 123 AVFIVKPDGTVAYKW 137 (164)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred EEEEECCCCEEEEEE
Confidence 578999999886443
No 195
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=22.03 E-value=2e+02 Score=24.04 Aligned_cols=66 Identities=21% Similarity=0.402 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEe---ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 24 TNLATAERLVRAAHGKGANIILI---QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 24 ~n~~~~~~~i~~a~~~~~dlvv~---PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
.|.+..+++|+-|+++|-+-|++ =|.|-..+. ......+....+.. +--+..|.+.|++.||-|++
T Consensus 368 ~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~--~~~~~~fd~~~p~p-d~Dl~eL~~YA~sKGV~iil 436 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFG--NSKDYVFDFVTPYP-DFDVKEIHRYAARKGIKMMM 436 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSS--SCCSSCCCSSCBCT-TCCHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccC--ccccccccccccCC-CCCHHHHHHHHHhCCCEEEE
Confidence 58999999999999999999998 776542110 00000112222221 23467888888888888765
No 196
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=21.95 E-value=2.5e+02 Score=20.83 Aligned_cols=75 Identities=16% Similarity=0.130 Sum_probs=42.3
Q ss_pred EEEEEeCCC---C----CCHHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHH
Q 031422 10 VVSALQFAC---T----DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (160)
Q Consensus 10 ~va~~Q~~~---~----~~~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (160)
.+.++++-. . .+.+...+.+.++++.+.+.++.+|+.- . .. ....+..+ ..... ....+.+.++++
T Consensus 232 d~VvI~~G~ND~~~~~~~~~~~~~~~l~~ii~~lr~~~a~vilvt-P-~~--~~~~~~~~-~~~~~--~~~~~~~~i~~l 304 (375)
T 2o14_A 232 DYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGADVILST-P-QG--RATDFTSE-GIHSS--VNRWYRASILAL 304 (375)
T ss_dssp CEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEEEC-C-CC--CTTCBCTT-SCBCC--TTSTTHHHHHHH
T ss_pred CEEEEEEEccCCCccCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC-C-CC--cccccCcc-cchhH--HHHHHHHHHHHH
Confidence 466666644 1 1456666777777777777788887763 1 11 00001000 00011 124667888999
Q ss_pred HHHcCcEEE
Q 031422 83 AKELGVVMP 91 (160)
Q Consensus 83 a~~~~i~i~ 91 (160)
|+++++.++
T Consensus 305 A~~~~v~~i 313 (375)
T 2o14_A 305 AEEEKTYLI 313 (375)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCeEE
Confidence 999998775
No 197
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=21.88 E-value=66 Score=19.48 Aligned_cols=18 Identities=11% Similarity=0.156 Sum_probs=13.6
Q ss_pred HHHHHHhCCCcEEEeccc
Q 031422 32 LVRAAHGKGANIILIQEL 49 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~ 49 (160)
+++.|.+.++|+||+.--
T Consensus 94 I~~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 94 LSDAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHhcCCCEEEEeCC
Confidence 445566779999999865
No 198
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=21.82 E-value=2.7e+02 Score=21.19 Aligned_cols=20 Identities=15% Similarity=0.365 Sum_probs=18.1
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.|+++++++++.+++
T Consensus 278 ~~~l~~l~~l~~~~g~lli~ 297 (472)
T 1ohv_A 278 DDFFRKLRDISRKHGCAFLV 297 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCEEEE
Confidence 47889999999999999987
No 199
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=21.79 E-value=43 Score=21.91 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
.+...+..+.++.++-.+.+..+|-.+
T Consensus 60 ~C~~~~p~l~~l~~~~~~~~~~vi~is 86 (187)
T 3dwv_A 60 YTKGGYETATTLYNKYKSQGFTVLAFP 86 (187)
T ss_dssp CCTTHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred CcHHHHHHHHHHHHHhhhCCeEEEEEE
Confidence 355666677777776666677777663
No 200
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=21.75 E-value=1.6e+02 Score=21.42 Aligned_cols=54 Identities=6% Similarity=0.075 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCC-cE--EEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGA-NI--ILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~-dl--vv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+ |- ++.|=++-+ .+....+.++.++...++++++ ..|.
T Consensus 87 ~t~~ai~la~~A~~~Ga~davlv~~P~y~~~------------------s~~~l~~~f~~va~a~~lPiilYn~P~ 144 (311)
T 3h5d_A 87 DTRDSIEFVKEVAEFGGFAAGLAIVPYYNKP------------------SQEGMYQHFKAIADASDLPIIIYNIPG 144 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEECCCSSCC------------------CHHHHHHHHHHHHHSCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEcCCCCCCC------------------CHHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 45667788888888776 74 344432211 0135667777777777777765 5553
No 201
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=21.68 E-value=2e+02 Score=23.60 Aligned_cols=17 Identities=18% Similarity=-0.015 Sum_probs=12.4
Q ss_pred HHHhCCCcEEEeccccc
Q 031422 35 AAHGKGANIILIQELFE 51 (160)
Q Consensus 35 ~a~~~~~dlvv~PE~~~ 51 (160)
.++.+|+|+|+-|=.+.
T Consensus 189 ~la~~GAdiil~pSasp 205 (680)
T 3sdb_A 189 EAALAGATVLANLSGSP 205 (680)
T ss_dssp HHHHHTCCEEEEECCCC
T ss_pred HHHhcCCeEEEEecCCc
Confidence 34456999999997643
No 202
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=21.67 E-value=1.3e+02 Score=17.52 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCcEEEeccccc-cCCeeeEEEEEEcCCCCEeEEee
Q 031422 76 ILKMQELAKELGVVMPVSFFEE-ANNAHYNSIAIIDADGSDLGLYR 120 (160)
Q Consensus 76 ~~~l~~~a~~~~i~i~~g~~~~-~~~~~~Ns~~~i~~~G~i~~~y~ 120 (160)
++.+.+.+++.++.+..+-... ........+++.+|+|..+..+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~ 129 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVST 129 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEe
Confidence 5666666677787775442222 22344567788899998876543
No 203
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=21.67 E-value=2e+02 Score=19.73 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEec
Q 031422 23 STNLATAERLVRAAHGKGANIILIQ 47 (160)
Q Consensus 23 ~~n~~~~~~~i~~a~~~~~dlvv~P 47 (160)
+..++.+.+.++.|+.-|++.|++.
T Consensus 85 ~~~~~~~~~~i~~A~~lG~~~v~~~ 109 (287)
T 2x7v_A 85 QKSVELLKKEVEICRKLGIRYLNIH 109 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 4567888999999999999998874
No 204
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=21.65 E-value=1.7e+02 Score=18.89 Aligned_cols=83 Identities=14% Similarity=0.174 Sum_probs=45.3
Q ss_pred ccEEEEEeCCCC-CCH------------------HHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhh-hc
Q 031422 8 EVVVSALQFACT-DDV------------------STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQ-RA 67 (160)
Q Consensus 8 ~~~va~~Q~~~~-~~~------------------~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~-~~ 67 (160)
+.||++++.+.. ... +.-.+.+.+.+++..+.|+++|+- +-.+ .+....++. .-
T Consensus 21 nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~-~k~I-----~d~a~~~l~k~g 94 (159)
T 1ass_A 21 NAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLC-QKGI-----DDVAQHYLAKEG 94 (159)
T ss_dssp EEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEE-SSCB-----CHHHHHHHHHTT
T ss_pred CccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEE-CCcc-----CHHHHHHHHHCC
Confidence 368999999872 111 112234566666777889997654 3222 222222221 11
Q ss_pred ccCCCChHHHHHHHHHHHcCcEEEecccc
Q 031422 68 KPYKDHPTILKMQELAKELGVVMPVSFFE 96 (160)
Q Consensus 68 ~~~~~~~~~~~l~~~a~~~~i~i~~g~~~ 96 (160)
...-...-...+.++|+..|..++...-.
T Consensus 95 I~~v~~v~~~dleria~atGa~iv~~~~~ 123 (159)
T 1ass_A 95 IYAVRRVKKSDMEKLAKATGAKIVTDLDD 123 (159)
T ss_dssp CEEECSCCHHHHHHHHHHHTCCCBSSTTS
T ss_pred CEEEccCCHHHHHHHHHHhCCeeeCcccc
Confidence 11112344566888888888887765443
No 205
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.59 E-value=72 Score=21.16 Aligned_cols=23 Identities=9% Similarity=0.003 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhC-CCcEEEeccc
Q 031422 27 ATAERLVRAAHGK-GANIILIQEL 49 (160)
Q Consensus 27 ~~~~~~i~~a~~~-~~dlvv~PE~ 49 (160)
+.+.+.++++.+. ++|+||.==.
T Consensus 67 ~~I~~al~~a~~~~~~DlVittGG 90 (178)
T 2pjk_A 67 IKILKAFTDALSIDEVDVIISTGG 90 (178)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCC
Confidence 5677777777665 6999986443
No 206
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=21.58 E-value=1.9e+02 Score=21.83 Aligned_cols=64 Identities=14% Similarity=0.161 Sum_probs=34.7
Q ss_pred CCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-ccccccCCeeeEEEEEEcCCCCEeE
Q 031422 39 KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFEEANNAHYNSIAIIDADGSDLG 117 (160)
Q Consensus 39 ~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~~~~~~~~Ns~~~i~~~G~i~~ 117 (160)
.+++++++=|-+.. .. ... .....+.|+++.++.++.+++ ..-...--.+.+..+++ .+|+++.
T Consensus 150 ~~P~lLLLDEPts~-LD---------~~~----~~~l~~~l~~l~~~~g~tii~vTHd~~ea~~~aDri~vl-~~G~i~~ 214 (381)
T 3rlf_A 150 AEPSVFLLDEPLSN-LD---------AAL----RVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVL-DAGRVAQ 214 (381)
T ss_dssp HCCSEEEEESTTTT-SC---------HHH----HHHHHHHHHHHHHHHCCEEEEECSCHHHHHHHCSEEEEE-ETTEEEE
T ss_pred cCCCEEEEECCCcC-CC---------HHH----HHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEE-ECCEEEE
Confidence 46888888884331 11 000 125667788888887877765 43221112334455566 3576653
No 207
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=21.51 E-value=1.2e+02 Score=20.61 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHcCcEEEe-ccccccCCeeeEEEEEEcCCCCEe
Q 031422 74 PTILKMQELAKELGVVMPV-SFFEEANNAHYNSIAIIDADGSDL 116 (160)
Q Consensus 74 ~~~~~l~~~a~~~~i~i~~-g~~~~~~~~~~Ns~~~i~~~G~i~ 116 (160)
...+.++++.++ +..+++ +.-...- .+.+..+++ .+|+++
T Consensus 178 ~~~~~l~~l~~~-g~tvi~vtHd~~~~-~~~d~v~~l-~~G~i~ 218 (224)
T 2pcj_A 178 RVMDIFLKINEG-GTSIVMVTHERELA-ELTHRTLEM-KDGKVV 218 (224)
T ss_dssp HHHHHHHHHHHT-TCEEEEECSCHHHH-TTSSEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHC-CCEEEEEcCCHHHH-HhCCEEEEE-ECCEEE
Confidence 455566776655 655554 4332221 345566667 467664
No 208
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=21.46 E-value=69 Score=19.35 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=13.5
Q ss_pred HHHHHHhCCCcEEEeccc
Q 031422 32 LVRAAHGKGANIILIQEL 49 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE~ 49 (160)
+++.|.+.++|+||+.--
T Consensus 91 I~~~a~~~~~dliV~G~~ 108 (137)
T 2z08_A 91 ILQAARAEKADLIVMGTR 108 (137)
T ss_dssp HHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHcCCCEEEECCC
Confidence 345566779999999864
No 209
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus}
Probab=21.39 E-value=1.6e+02 Score=18.68 Aligned_cols=41 Identities=7% Similarity=0.121 Sum_probs=28.7
Q ss_pred ccEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhC-CCcEEEecc
Q 031422 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGK-GANIILIQE 48 (160)
Q Consensus 8 ~~~va~~Q~~~-~~~~~~n~~~~~~~i~~a~~~-~~dlvv~PE 48 (160)
++.+|++..+. ..+.+.-+++....+..|+.. +-.++++-+
T Consensus 122 ~~siGi~~~~~~~~~~~~ll~~A~~Al~~ak~~g~~~~~~y~~ 164 (178)
T 3mtk_A 122 NFNIGAAQIENSNEAAANLMRRCDLALIKAKEEGLNEYVIFKP 164 (178)
T ss_dssp CEEEEEEECC----CHHHHHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred EEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEECh
Confidence 46788888755 457888888999999988775 456666644
No 210
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.15 E-value=72 Score=20.95 Aligned_cols=24 Identities=17% Similarity=0.057 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhC-CCcEEEeccc
Q 031422 26 LATAERLVRAAHGK-GANIILIQEL 49 (160)
Q Consensus 26 ~~~~~~~i~~a~~~-~~dlvv~PE~ 49 (160)
.+.+.+.++++.+. ++|+|+.==.
T Consensus 54 ~~~i~~~l~~a~~~~~~DlVittGG 78 (172)
T 1mkz_A 54 RYAIRAQVSAWIASDDVQVVLITGG 78 (172)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEESC
T ss_pred HHHHHHHHHHHHhcCCCCEEEeCCC
Confidence 35777788877765 6999987554
No 211
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=21.15 E-value=1.8e+02 Score=19.08 Aligned_cols=83 Identities=7% Similarity=0.003 Sum_probs=45.7
Q ss_pred ccEEEEEeCCCC-CC--------------HH----HHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhh-hc
Q 031422 8 EVVVSALQFACT-DD--------------VS----TNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQ-RA 67 (160)
Q Consensus 8 ~~~va~~Q~~~~-~~--------------~~----~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~-~~ 67 (160)
+.||++++.+.. .. .+ .-.+.+.+.+++..+.|+++|+- +-.+ .+....++. .-
T Consensus 27 nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~-~k~I-----~d~a~~~l~k~g 100 (178)
T 1gml_A 27 NPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVIT-EKGI-----SDLAQHYLMRAN 100 (178)
T ss_dssp SCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEEEE-SSCB-----CHHHHHHHHHTT
T ss_pred cceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEE-CCcc-----cHHHHHHHHHCC
Confidence 468999999872 11 11 12234566667777889997764 3222 222222221 11
Q ss_pred ccCCCChHHHHHHHHHHHcCcEEEecccc
Q 031422 68 KPYKDHPTILKMQELAKELGVVMPVSFFE 96 (160)
Q Consensus 68 ~~~~~~~~~~~l~~~a~~~~i~i~~g~~~ 96 (160)
...-...-...+.++|+..|..++...-.
T Consensus 101 I~~vr~v~~~dleria~atGa~iv~~~~~ 129 (178)
T 1gml_A 101 VTAIRRVRKTDNNRIARACGARIVSRPEE 129 (178)
T ss_dssp CEEECCCCHHHHHHHHHHHCCCEESCGGG
T ss_pred CEEEecCCHHHHHHHHHHhCCeEeCChhh
Confidence 11111344567888898888888765443
No 212
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=21.11 E-value=2.5e+02 Score=20.60 Aligned_cols=66 Identities=9% Similarity=0.024 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 22 ~~~n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
...|++.+.+.++.-.+++..+.=+.--.++-..-..+..++.+.. ...+..+.++++++++-+.+
T Consensus 55 ~~~Nl~~l~~il~~n~~~~I~~yRiSS~l~P~~thp~~~~~~~~~~-----~~~l~~iG~~a~~~~iRLS~ 120 (310)
T 3tc3_A 55 SSSNLLCLKNILEWNLKHEILFFRISSNTIPLASHPKFHVNWKDKL-----SHILGDIGDFIKENSIRISM 120 (310)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCTTSSTTTTSTTCCCCHHHHT-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEeCcccCCCccccccccchHHHH-----HHHHHHHHHHHHHcCcEEEe
Confidence 4678899999999888899998765544333211111111122211 25677889999999998876
No 213
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=21.08 E-value=70 Score=19.33 Aligned_cols=17 Identities=18% Similarity=0.370 Sum_probs=12.0
Q ss_pred HHHHHHhCCCcEEEecc
Q 031422 32 LVRAAHGKGANIILIQE 48 (160)
Q Consensus 32 ~i~~a~~~~~dlvv~PE 48 (160)
+++.|.+.++|+||+.-
T Consensus 101 I~~~a~~~~~dliV~G~ 117 (138)
T 1q77_A 101 VKKFVEGKGYELVVWAC 117 (138)
T ss_dssp HHHHHTTSCCSEEEECS
T ss_pred HHHHHHhcCCCEEEEeC
Confidence 34455667899999874
No 214
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=21.05 E-value=17 Score=26.53 Aligned_cols=29 Identities=14% Similarity=0.202 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 031422 21 DVSTNLATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 21 ~~~~n~~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
|.+..-..+.+-++.+.+.|+|+|..|+.
T Consensus 70 Dl~~YPRtle~D~~~l~~~gvd~vF~P~~ 98 (287)
T 3q12_A 70 DLAHYPRTLQEDCEKLTRHGADLVFAPAA 98 (287)
T ss_dssp HHHHSCCCHHHHHHHHHHHTCSEEECCCH
T ss_pred hhhcCCCCHHHHHHHHHHCCCCEEECCCh
Confidence 44443345555666666679999999963
No 215
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=21.02 E-value=77 Score=19.26 Aligned_cols=19 Identities=21% Similarity=0.422 Sum_probs=14.0
Q ss_pred HHHHHHHhCCCcEEEeccc
Q 031422 31 RLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 31 ~~i~~a~~~~~dlvv~PE~ 49 (160)
.+++.|.+.++|+||..--
T Consensus 101 ~I~~~a~~~~~dliV~G~~ 119 (147)
T 3hgm_A 101 TIVRFARKRECDLVVIGAQ 119 (147)
T ss_dssp HHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHhCCCEEEEeCC
Confidence 3455566779999999864
No 216
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=21.00 E-value=2.7e+02 Score=20.99 Aligned_cols=63 Identities=16% Similarity=0.209 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhCCCcEEEeccccccccccccc-hhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
+.+.+..+...+.++++||+=|.... +..... ...+.+.... -...+..|.++++++++.+++
T Consensus 260 ~~l~~~~~~l~~~~~~llVIDs~t~~-~~~~~sg~g~l~~Rq~~--l~~il~~L~~lake~gitVIl 323 (400)
T 3lda_A 260 RLLDAAAQMMSESRFSLIVVDSVMAL-YRTDFSGRGELSARQMH--LAKFMRALQRLADQFGVAVVV 323 (400)
T ss_dssp HHHHHHHHHHHHSCEEEEEEETGGGG-CC------CCHHHHHHH--HHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHhcCCceEEecchhhh-CchhhcCccchHHHHHH--HHHHHHHHHHHHHHcCCEEEE
Confidence 33344444455578999999886432 111000 0000000000 025677899999999998876
No 217
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=20.95 E-value=75 Score=20.66 Aligned_cols=24 Identities=8% Similarity=0.117 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHh-CCCcEEEeccc
Q 031422 26 LATAERLVRAAHG-KGANIILIQEL 49 (160)
Q Consensus 26 ~~~~~~~i~~a~~-~~~dlvv~PE~ 49 (160)
.+.+.+.++++.+ .++|+|+.==.
T Consensus 56 ~~~i~~~l~~~~~~~~~DlVittGG 80 (167)
T 1uuy_A 56 VERIKDILQKWSDVDEMDLILTLGG 80 (167)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEESC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCC
Confidence 3566667777765 58999987544
No 218
>1x52_A Pelota homolog, CGI-17; ERF1_3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.79.3.2
Probab=20.88 E-value=76 Score=19.77 Aligned_cols=27 Identities=15% Similarity=0.190 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCcEEEeccccccc
Q 031422 27 ATAERLVRAAHGKGANIILIQELFEGY 53 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~~~~g 53 (160)
..+.++++.+.+.|+++.++|.....|
T Consensus 74 ~~~~el~e~~~~~G~~V~ivs~~~~~G 100 (124)
T 1x52_A 74 SRYVRLVDSVKENAGTVRIFSSLHVSG 100 (124)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCccH
Confidence 455668888989999999999976543
No 219
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=20.81 E-value=1.5e+02 Score=21.16 Aligned_cols=47 Identities=19% Similarity=0.125 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.++++.+++.++..|+. |... ++...+.+.+.|++.|+.+.+
T Consensus 197 s~~~l~~l~~~ik~~~v~~if~-e~~~--------------------~~~~~~~l~~~a~~~g~~v~~ 243 (282)
T 3mfq_A 197 ANSDMIETVNLIIDHNIKAIFT-ESTT--------------------NPERMKKLQEAVKAKGGQVEV 243 (282)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEC-BTTS--------------------CTHHHHHHHHHHHTTSCCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-eCCC--------------------ChHHHHHHHHHHHhcCCceEE
Confidence 3566777777777778888854 5322 146778888889998876544
No 220
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=20.57 E-value=2.8e+02 Score=20.86 Aligned_cols=20 Identities=10% Similarity=0.132 Sum_probs=18.2
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.|.++++++++.++.
T Consensus 247 ~~~l~~l~~l~~~~g~~lI~ 266 (451)
T 3oks_A 247 DGFLPTLLDWCRKNDVVFIA 266 (451)
T ss_dssp TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 57899999999999999986
No 221
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=20.54 E-value=80 Score=19.80 Aligned_cols=19 Identities=21% Similarity=0.242 Sum_probs=14.9
Q ss_pred eEEEEEEcCCCCEeEEeee
Q 031422 103 YNSIAIIDADGSDLGLYRK 121 (160)
Q Consensus 103 ~Ns~~~i~~~G~i~~~y~K 121 (160)
.-+.++++++|.++..+.-
T Consensus 111 ~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 111 ARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp CCEEEEECTTSBEEEEEEC
T ss_pred cceEEEECCCCEEEEEEec
Confidence 4578999999998866654
No 222
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=20.37 E-value=1.2e+02 Score=22.55 Aligned_cols=55 Identities=11% Similarity=0.021 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHH-HcCcEEEe-ccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK-ELGVVMPV-SFF 95 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~-~~~i~i~~-g~~ 95 (160)
+.+...++.+.|.+.|+|-++. |=++..+. .+....+.++.++. ..+++|++ ..|
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P~y~~~~----------------s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 103 NTASAVAHAVHAQKVGAKGLMVIPRVLSRGS----------------VIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCSSSTT----------------CHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCccCCCC----------------CHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 4566777788887888886543 32222100 01356677778887 66777765 666
No 223
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.21 E-value=79 Score=21.22 Aligned_cols=23 Identities=9% Similarity=0.066 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhCCCcEEEeccc
Q 031422 27 ATAERLVRAAHGKGANIILIQEL 49 (160)
Q Consensus 27 ~~~~~~i~~a~~~~~dlvv~PE~ 49 (160)
+.+.+.++++.+.++|+|+.-=.
T Consensus 76 ~~I~~al~~a~~~~~DlVIttGG 98 (185)
T 3rfq_A 76 VDIRNALNTAVIGGVDLVVSVGG 98 (185)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHHhCCCCEEEECCC
Confidence 55666677665568999987544
No 224
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=20.16 E-value=1.9e+02 Score=18.85 Aligned_cols=47 Identities=6% Similarity=0.070 Sum_probs=25.6
Q ss_pred CCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 031422 40 GANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 40 ~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~ 92 (160)
++++||+=|....- .... +....... -....+.|.+++++.++.+++
T Consensus 105 ~~~lliiD~~~~~l-~~~~---~~~~~~~~--~~~~~~~L~~l~~~~~~~vi~ 151 (220)
T 2cvh_A 105 NFALVVVDSITAHY-RAEE---NRSGLIAE--LSRQLQVLLWIARKHNIPVIV 151 (220)
T ss_dssp TEEEEEEECCCCCT-TGGG---GSSTTHHH--HHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCEEEEcCcHHHh-hhcC---chHHHHHH--HHHHHHHHHHHHHHcCCEEEE
Confidence 69999999975421 1100 00000000 013556688899988877665
No 225
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=20.13 E-value=2.8e+02 Score=20.83 Aligned_cols=20 Identities=25% Similarity=0.243 Sum_probs=18.1
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 031422 73 HPTILKMQELAKELGVVMPV 92 (160)
Q Consensus 73 ~~~~~~l~~~a~~~~i~i~~ 92 (160)
..+++.|.++++++++.++.
T Consensus 245 ~~~l~~l~~l~~~~~~llI~ 264 (453)
T 4ffc_A 245 PGFLATLTAWASENGVVFIA 264 (453)
T ss_dssp TTHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 57899999999999999986
No 226
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=20.12 E-value=1.5e+02 Score=21.09 Aligned_cols=54 Identities=17% Similarity=0.130 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEe-ccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-cccc
Q 031422 25 NLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFE 96 (160)
Q Consensus 25 n~~~~~~~i~~a~~~~~dlvv~-PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~ 96 (160)
+.++..++.+.|.+.|+|-++. |=++.. .. .+....+.++.++. ++++++ ..|.
T Consensus 73 ~t~~ai~la~~A~~~Gadavlv~~P~y~~-------------~~---~~~~l~~~f~~va~--~lPiilYn~P~ 128 (283)
T 2pcq_A 73 TLPQAEGALLEAKAAGAMALLATPPRYYH-------------GS---LGAGLLRYYEALAE--KMPLFLYHVPQ 128 (283)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCTTG-------------GG---TTTHHHHHHHHHHH--HSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEecCCcCCC-------------CC---CHHHHHHHHHHHhc--CCCEEEEeCcc
Confidence 4566777888888889996543 322211 00 02466777777777 566655 5443
No 227
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=20.11 E-value=72 Score=20.10 Aligned_cols=18 Identities=28% Similarity=0.420 Sum_probs=14.0
Q ss_pred EEEEEEcCCCCEeEEeee
Q 031422 104 NSIAIIDADGSDLGLYRK 121 (160)
Q Consensus 104 Ns~~~i~~~G~i~~~y~K 121 (160)
.+.++++++|.++.+|.-
T Consensus 137 p~~~lid~~G~i~~~~~g 154 (174)
T 1xzo_A 137 SSFYLVGPDGKVLKDYNG 154 (174)
T ss_dssp CEEEEECTTSEEEEEEES
T ss_pred eEEEEECCCCeEEEEEcC
Confidence 467999999998866653
No 228
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=20.09 E-value=78 Score=19.98 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=12.1
Q ss_pred EEEEEEcCCCCEeEEe
Q 031422 104 NSIAIIDADGSDLGLY 119 (160)
Q Consensus 104 Ns~~~i~~~G~i~~~y 119 (160)
-+.++|+++|.|+..+
T Consensus 120 p~tflID~~G~I~~~~ 135 (157)
T 4g2e_A 120 RAVFVIDKEGKVRYKW 135 (157)
T ss_dssp EEEEEECTTSBEEEEE
T ss_pred eeEEEECCCCEEEEEE
Confidence 3579999999886443
No 229
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=20.01 E-value=2.7e+02 Score=20.78 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=34.0
Q ss_pred hCCCcEEEeccccccccccccchhhHhhhcccCCCChHHHHHHHHHHHcCcEEEe-ccccccCCeeeEEEEEEcCCCCEe
Q 031422 38 GKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV-SFFEEANNAHYNSIAIIDADGSDL 116 (160)
Q Consensus 38 ~~~~dlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~-g~~~~~~~~~~Ns~~~i~~~G~i~ 116 (160)
-.+++++++=|-+.. .. ... .....+.|+++.++.++.+++ ..-...-..+.+..+++ .+|+++
T Consensus 155 ~~~P~lLLLDEP~s~-LD---------~~~----r~~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~~G~i~ 219 (372)
T 1g29_1 155 VRKPQVFLMDEPLSN-LD---------AKL----RVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVM-NRGVLQ 219 (372)
T ss_dssp HTCCSEEEEECTTTT-SC---------HHH----HHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEE-ETTEEE
T ss_pred hcCCCEEEECCCCcc-CC---------HHH----HHHHHHHHHHHHHhcCCEEEEECCCHHHHHHhCCEEEEE-eCCEEE
Confidence 346888888885331 11 000 124556677777776766655 32221112234455566 357665
Q ss_pred E
Q 031422 117 G 117 (160)
Q Consensus 117 ~ 117 (160)
.
T Consensus 220 ~ 220 (372)
T 1g29_1 220 Q 220 (372)
T ss_dssp E
T ss_pred E
Confidence 3
Done!