BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031423
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain
168) GN=yuiD PE=4 SV=1
Length = 158
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 35 NNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQE 94
N PL+S+ A AQ +K+ + ++ D + +GGMPSSHSA V+AL+ + L+
Sbjct: 5 TNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEH 64
Query: 95 GSGSPSFAIAVVLACI-----------------LLNQIVC----------EFPPDHPLSS 127
G S FA++ + A I ++N++V +FP
Sbjct: 65 GLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEKEK 124
Query: 128 VRPLRELLGHTPLQVVAGGILGCVVAFLM 156
+ L+ELLGH P++V GG+ G ++ ++
Sbjct: 125 QKKLKELLGHQPIEVFFGGLTGILLTLVL 153
>sp|Q57071|PTG3C_STACT PTS system glucose-specific EIICBA component OS=Staphylococcus
carnosus (strain TM300) GN=ptsG PE=1 SV=1
Length = 675
Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEF---PPD 122
+K M +GG+ + A + AL VAIGL G G AIA + I+LN+ + F P+
Sbjct: 57 AKMMEGAGGIIFDNLAIIFALGVAIGLASGDGVA--AIAAFVGFIVLNKTMGMFLGVTPE 114
Query: 123 HPLSSVRPLRELLGHTPLQ--VVAGGILGCVVAF 154
+ +LG LQ V G I+G + A+
Sbjct: 115 KAADAATGFANVLGIPTLQTGVFGGIIIGALAAW 148
>sp|C6BW35|MURA_DESAD UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Desulfovibrio
salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /
VKM B-1763) GN=murA PE=3 SV=1
Length = 417
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 11/59 (18%)
Query: 96 SGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAF 154
SGS + A+ ++LACIL +C LS+V LR++ HT L+++ ILGC +F
Sbjct: 19 SGSKNAALPILLACILPEGPIC-------LSNVPRLRDI--HTTLKLL--DILGCETSF 66
>sp|P0CS12|TYSY_CRYNJ Thymidylate synthase OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=TMP1 PE=1
SV=1
Length = 317
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 3 EVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISA---FLAFALAQFLKIFTTWY 59
+I VG+ R+G T L +PPS N LPL++ FL +A+ L W+
Sbjct: 29 RIINVGEVRPDRTGTGTVALFAPPSFRFSLADNTLPLLTTKRVFLRGVIAELL-----WF 83
Query: 60 KEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLA 108
D+ KML S G +G+ +G+GS F V L
Sbjct: 84 VSGCTDA-KMLSSQG---------------VGIWDGNGSKEFLEKVGLG 116
>sp|P0CS13|TYSY_CRYNB Thymidylate synthase OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=TMP1 PE=3 SV=1
Length = 317
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 3 EVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISA---FLAFALAQFLKIFTTWY 59
+I VG+ R+G T L +PPS N LPL++ FL +A+ L W+
Sbjct: 29 RIINVGEVRPDRTGTGTVALFAPPSFRFSLADNTLPLLTTKRVFLRGVIAELL-----WF 83
Query: 60 KEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLA 108
D+ KML S G +G+ +G+GS F V L
Sbjct: 84 VSGCTDA-KMLSSQG---------------VGIWDGNGSKEFLEKVGLG 116
>sp|Q8NYM1|PTG3C_STAAW PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain MW2) GN=ptsG PE=3 SV=1
Length = 681
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|A8Z0F5|PTG3C_STAAT PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=ptsG PE=3 SV=2
Length = 681
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q6GCT7|PTG3C_STAAS PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain MSSA476) GN=ptsG PE=3 SV=1
Length = 681
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|A6QDH3|PTG3C_STAAE PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain Newman) GN=ptsG PE=3 SV=1
Length = 681
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q5HJI3|PTG3C_STAAC PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain COL) GN=ptsG PE=3 SV=1
Length = 681
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q2G1G8|PTG3C_STAA8 PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain NCTC 8325) GN=ptsG PE=3 SV=2
Length = 681
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q2FK73|PTG3C_STAA3 PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain USA300) GN=ptsG PE=3 SV=1
Length = 681
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q6GKB7|PTG3C_STAAR PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain MRSA252) GN=ptsG PE=3 SV=1
Length = 681
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q2YUZ1|PTG3C_STAAB PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=ptsG PE=3 SV=1
Length = 681
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +GG+ + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NIGDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q31HF8|NUOC_THICR NADH-quinone oxidoreductase subunit C OS=Thiomicrospira crunogena
(strain XCL-2) GN=nuoC PE=3 SV=1
Length = 223
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 84 SALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVV 143
S L + +QE G A+V++ I L+++ E P+ LS++ L+E LG L V
Sbjct: 4 SVLDLQATIQETLGD-----AIVVSDIKLDELTVELAPEQSLSALTKLKEKLGFDQLIDV 58
Query: 144 AG 145
G
Sbjct: 59 CG 60
>sp|Q4A0C4|PTG3C_STAS1 PTS system glucose-specific EIICBA component OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=ptsG PE=3 SV=2
Length = 678
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEF---PPD 122
++ M +GG+ + + A+ VAIGL G G AIA + +++N+ + F PD
Sbjct: 57 AEMMTGAGGIIFDNLPMIFAMGVAIGLASGDGVA--AIAAFVGYLVMNKTMGAFLHVSPD 114
Query: 123 HPLSSVRPLRELLGHTPLQ--VVAGGILGCVVAF 154
+ + +LG LQ V G I+G + A+
Sbjct: 115 NVNDAASGYASVLGIPTLQTGVFGGIIIGALAAW 148
>sp|Q4L945|PTG3C_STAHJ PTS system glucose-specific EIICBA component OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ptsG PE=3 SV=1
Length = 675
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 37 LPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGS 96
L + +AF AL Q+L + + M +GG+ + + AL VAIGL G
Sbjct: 30 LAIGTAFQGEALQQYLPFIKNGVIQNI--ANMMTGAGGIIFDNLPIIFALGVAIGLAGGD 87
Query: 97 GSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLR---ELLGHTPLQ--VVAGGILGCV 151
G AIA + I++N+ + F P P + +LG LQ V G I+G +
Sbjct: 88 GVA--AIAAFVGFIIMNKTMGAFLNVTPAQLEDPSKGFANVLGIPTLQTGVFGGIIIGAL 145
Query: 152 VAF 154
A+
Sbjct: 146 AAW 148
>sp|Q7A807|PTG3C_STAAN PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain N315) GN=ptsG PE=1 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +G + + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTAAGSIIFENLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NVTDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q99X32|PTG3C_STAAM PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=ptsG PE=3 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +G + + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTAAGSIIFENLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NVTDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|A5IP58|PTG3C_STAA9 PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain JH9) GN=ptsG PE=3 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +G + + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTAAGSIIFENLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NVTDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|A6TXX3|PTG3C_STAA2 PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain JH1) GN=ptsG PE=3 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +G + + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTAAGSIIFENLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NVTDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|A7WXI2|PTG3C_STAA1 PTS system glucose-specific EIICBA component OS=Staphylococcus
aureus (strain Mu3 / ATCC 700698) GN=ptsG PE=3 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 66 SKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPL 125
+K M +G + + + AL VAIGL G G AIA + I++N+ + +F P
Sbjct: 57 AKLMTAAGSIIFENLPMIFALGVAIGLAGGDGVA--AIAAFVGYIIMNKTMGDFLQVTPK 114
Query: 126 SSVRPLR---ELLGHTPLQ--VVAGGILGCVVAF 154
+ P +LG LQ V G I+G + A+
Sbjct: 115 NVTDPASGYASILGIPTLQTGVFGGIIIGALAAW 148
>sp|Q7CCJ4|PTG3C_STAES PTS system glucose-specific EIICBA component OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=ptsG PE=3 SV=1
Length = 675
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 72 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEF---PPDHPLSSV 128
+GG+ + + AL VAIGL G G AIA + I+LN+ + F PD
Sbjct: 63 AGGIIFDNLPIIFALGVAIGLAGGDGVA--AIAAFVGFIILNKTMGAFLHVTPDKLSDPT 120
Query: 129 RPLRELLGHTPLQ--VVAGGILGCVVAF 154
+LG LQ V G I+G + A+
Sbjct: 121 NGYANVLGIPTLQTGVFGGIIIGALAAW 148
>sp|Q5HL73|PTG3C_STAEQ PTS system glucose-specific EIICBA component OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=ptsG PE=3
SV=1
Length = 675
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 72 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEF---PPDHPLSSV 128
+GG+ + + AL VAIGL G G AIA + I+LN+ + F PD
Sbjct: 63 AGGIIFDNLPIIFALGVAIGLAGGDGVA--AIAAFVGFIILNKTMGAFLHVTPDKLSDPT 120
Query: 129 RPLRELLGHTPLQ--VVAGGILGCVVAF 154
+LG LQ V G I+G + A+
Sbjct: 121 NGYANVLGIPTLQTGVFGGIIIGALAAW 148
>sp|Q8VRH0|PTG3C_STAEP PTS system glucose-specific EIICBA component OS=Staphylococcus
epidermidis GN=ptsG PE=3 SV=1
Length = 675
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 72 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEF---PPDHPLSSV 128
+GG+ + + AL VAIGL G G AIA + I+LN+ + F PD
Sbjct: 63 AGGIIFDNLPIIFALGVAIGLAGGDGVA--AIAAFVGFIILNKTMGAFLHVTPDKLSDPT 120
Query: 129 RPLRELLGHTPLQ--VVAGGILGCVVAF 154
+LG LQ V G I+G + A+
Sbjct: 121 NGYANVLGIPTLQTGVFGGIIIGALAAW 148
>sp|A8I7Y5|CTAA_AZOC5 Heme A synthase OS=Azorhizobium caulinodans (strain ATCC 43989 /
DSM 5975 / ORS 571) GN=ctaA PE=3 SV=1
Length = 349
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 88 VAIGLQEGSGSPSFAIAV--VLACILLNQIVCEFPPDHPLSS------VR-PLRELLGHT 138
VA GL E + + +AV LACI+L IV PL++ VR R L+G
Sbjct: 149 VASGLTEHTSVSQYRLAVHLTLACIILTAIVAVARSLSPLAAQALPARVRLTARVLVGLV 208
Query: 139 PLQVVAGGIL 148
LQ+ AGG++
Sbjct: 209 LLQIFAGGLV 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,672,103
Number of Sequences: 539616
Number of extensions: 2239283
Number of successful extensions: 5446
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5443
Number of HSP's gapped (non-prelim): 29
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)