Query 031423
Match_columns 160
No_of_seqs 132 out of 454
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 13:53:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031423.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031423hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02681 DUF212: Divergent PAP 100.0 1.6E-47 3.5E-52 299.9 12.0 121 33-153 1-141 (141)
2 COG1963 Uncharacterized protei 100.0 7.6E-45 1.6E-49 285.9 9.8 127 32-158 6-149 (153)
3 cd03383 PAP2_diacylglycerolkin 99.6 1.9E-14 4.2E-19 108.0 10.7 96 36-158 11-107 (109)
4 cd03394 PAP2_like_5 PAP2_like_ 99.5 1.5E-13 3.3E-18 100.6 10.5 98 38-157 8-106 (106)
5 PRK09597 lipid A 1-phosphatase 99.4 4.6E-12 1E-16 104.0 11.4 102 38-158 82-186 (190)
6 cd03388 PAP2_SPPase1 PAP2_like 99.4 5.4E-12 1.2E-16 97.7 11.1 101 39-156 39-150 (151)
7 cd03385 PAP2_BcrC_like PAP2_li 99.4 7.3E-12 1.6E-16 96.0 10.8 101 39-158 39-144 (144)
8 cd03391 PAP2_containing_2_like 99.4 4.8E-12 1E-16 99.6 9.7 100 40-156 54-158 (159)
9 cd03393 PAP2_like_3 PAP2_like_ 99.3 1.1E-11 2.4E-16 92.9 10.7 100 38-156 18-124 (125)
10 cd03382 PAP2_dolichyldiphospha 99.3 8.9E-12 1.9E-16 97.8 9.9 99 41-157 50-159 (159)
11 cd03395 PAP2_like_4 PAP2_like_ 99.3 2.3E-11 4.9E-16 96.0 10.3 96 43-156 67-170 (177)
12 cd03392 PAP2_like_2 PAP2_like_ 99.3 6.1E-11 1.3E-15 93.3 11.0 100 39-156 68-175 (182)
13 cd03384 PAP2_wunen PAP2, wunen 99.2 7.7E-11 1.7E-15 91.8 9.8 102 38-156 9-149 (150)
14 cd03389 PAP2_lipid_A_1_phospha 99.2 2.5E-10 5.3E-15 91.6 10.8 99 40-158 76-184 (186)
15 cd03390 PAP2_containing_1_like 99.2 1.5E-10 3.2E-15 92.8 9.3 103 39-158 52-191 (193)
16 PLN02525 phosphatidic acid pho 99.2 1.7E-10 3.7E-15 102.0 10.3 99 41-156 43-160 (352)
17 PF01569 PAP2: PAP2 superfamil 99.2 2.5E-10 5.4E-15 83.0 9.3 103 39-158 6-122 (129)
18 cd01610 PAP2_like PAP2_like pr 99.1 9E-10 1.9E-14 78.2 9.9 100 40-156 10-121 (122)
19 smart00014 acidPPc Acid phosph 99.1 1.9E-09 4E-14 78.9 10.5 98 42-156 4-115 (116)
20 PRK11837 undecaprenyl pyrophos 99.1 1.8E-09 4E-14 88.3 10.7 99 39-156 65-168 (202)
21 PRK10699 phosphatidylglyceroph 99.0 1.9E-09 4.1E-14 91.4 9.5 66 74-156 158-226 (244)
22 KOG3146 Dolichyl pyrophosphate 99.0 1.9E-09 4.2E-14 90.3 9.4 75 71-157 92-173 (228)
23 cd03381 PAP2_glucose_6_phospha 99.0 4E-09 8.6E-14 88.8 9.9 102 39-157 21-151 (235)
24 cd03396 PAP2_like_6 PAP2_like_ 98.9 7.1E-09 1.5E-13 83.4 9.9 104 38-158 72-195 (197)
25 PLN02731 Putative lipid phosph 98.9 8.1E-09 1.7E-13 91.0 10.3 103 39-158 123-260 (333)
26 PLN02250 lipid phosphate phosp 98.9 8.3E-09 1.8E-13 90.2 9.7 103 39-158 104-242 (314)
27 cd03380 PAP2_like_1 PAP2_like_ 98.9 1.8E-08 3.9E-13 81.5 10.9 90 47-156 107-207 (209)
28 COG0671 PgpB Membrane-associat 98.9 1.4E-08 3E-13 77.3 8.9 68 72-156 133-207 (232)
29 PLN02715 lipid phosphate phosp 98.8 1.8E-08 3.8E-13 88.7 9.8 103 39-158 129-266 (327)
30 cd03397 PAP2_acid_phosphatase 98.8 5.5E-08 1.2E-12 81.0 9.8 91 49-159 117-217 (232)
31 cd03398 PAP2_haloperoxidase PA 98.5 1.1E-06 2.4E-11 72.7 10.4 93 47-156 100-230 (232)
32 KOG2822 Sphingoid base-phospha 98.3 2E-06 4.4E-11 77.4 6.7 103 42-157 120-233 (407)
33 KOG3030 Lipid phosphate phosph 98.2 2.4E-05 5.3E-10 68.8 11.3 103 39-157 116-258 (317)
34 cd03386 PAP2_Aur1_like PAP2_li 98.2 7.8E-06 1.7E-10 65.2 7.3 68 72-158 116-184 (186)
35 KOG4268 Uncharacterized conser 97.7 0.00045 9.8E-09 56.4 10.0 99 39-154 69-174 (189)
36 PF14378 PAP2_3: PAP2 superfam 96.4 0.011 2.4E-07 47.0 6.3 62 74-152 127-188 (191)
37 PF14360 PAP2_C: PAP2 superfam 85.9 3.1 6.6E-05 29.1 5.7 64 75-154 6-70 (74)
38 COG4129 Predicted membrane pro 85.4 1.2 2.7E-05 39.5 4.3 66 74-157 10-75 (332)
39 PF10261 Scs3p: Inositol phosp 70.1 26 0.00056 29.4 7.5 53 29-81 129-183 (238)
40 PRK11660 putative transporter; 69.4 32 0.00068 32.2 8.6 47 42-88 289-346 (568)
41 PF00916 Sulfate_transp: Sulfa 60.7 62 0.0013 26.6 8.0 26 72-97 198-223 (280)
42 TIGR00815 sulP high affinity s 45.8 78 0.0017 29.5 6.9 51 39-90 266-328 (563)
43 PF06081 DUF939: Bacterial pro 44.1 98 0.0021 23.7 6.2 20 135-154 120-139 (141)
44 KOG3142 Prenylated rab accepto 43.1 1.6E+02 0.0035 24.5 7.6 34 60-94 35-70 (187)
45 COG1114 BrnQ Branched-chain am 41.6 44 0.00096 31.2 4.5 45 71-115 167-211 (431)
46 COG3775 GatC Phosphotransferas 39.6 51 0.0011 30.8 4.6 95 39-155 145-240 (446)
47 PF14362 DUF4407: Domain of un 38.3 1E+02 0.0022 26.2 6.0 34 80-113 25-61 (301)
48 PF03611 EIIC-GAT: PTS system 37.0 75 0.0016 29.0 5.3 46 111-156 189-236 (415)
49 TIGR02005 PTS-IIBC-alpha PTS s 35.5 1.1E+02 0.0023 29.1 6.2 83 73-156 58-153 (524)
50 TIGR00827 EIIC-GAT PTS system, 35.0 3.7E+02 0.0081 24.9 9.6 46 111-156 185-231 (407)
51 COG5336 Uncharacterized protei 33.5 40 0.00087 26.1 2.5 18 139-156 49-66 (116)
52 PF06081 DUF939: Bacterial pro 28.7 1.6E+02 0.0034 22.6 5.1 26 77-102 7-32 (141)
53 PRK11492 hyfE hydrogenase 4 me 27.7 3.6E+02 0.0079 22.5 8.4 63 78-148 36-106 (216)
54 KOG0682 Ammonia permease [Inor 26.7 2.5E+02 0.0054 26.8 6.9 44 27-70 248-292 (500)
55 PF05525 Branch_AA_trans: Bran 25.0 2.6E+02 0.0057 25.8 6.7 34 84-117 178-211 (427)
56 PF12270 Cyt_c_ox_IV: Cytochro 24.0 3.7E+02 0.008 21.3 8.6 77 38-116 41-127 (137)
57 COG4803 Predicted membrane pro 23.8 30 0.00065 28.4 0.3 30 129-158 49-78 (170)
58 PRK00523 hypothetical protein; 23.6 41 0.00089 24.1 0.9 40 103-142 17-59 (72)
59 PRK11089 PTS system glucose-sp 23.5 2.1E+02 0.0046 26.8 5.9 75 76-156 55-132 (477)
60 PF01034 Syndecan: Syndecan do 21.3 32 0.00068 24.1 0.0 15 140-154 8-22 (64)
61 PF04632 FUSC: Fusaric acid re 20.6 2.6E+02 0.0056 25.9 5.8 26 80-105 8-33 (650)
62 PRK00376 lspA lipoprotein sign 20.1 4.4E+02 0.0095 20.7 8.0 15 45-59 18-32 (160)
No 1
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=100.00 E-value=1.6e-47 Score=299.92 Aligned_cols=121 Identities=57% Similarity=0.899 Sum_probs=113.9
Q ss_pred ccchhHHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH--
Q 031423 33 FPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI-- 110 (160)
Q Consensus 33 l~~N~il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~I-- 110 (160)
|++|++|+++++||++||++|++++++++|+|||++++++|||||||||+|+||||++|+.+|++||+|+++++||+|
T Consensus 1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm 80 (141)
T PF02681_consen 1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM 80 (141)
T ss_pred CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---------------HHHHHhhcCCCCC---CCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 031423 111 ---------------LLNQIVCEFPPDH---PLSSVRPLRELLGHTPLQVVAGGILGCVVA 153 (160)
Q Consensus 111 ---------------vln~l~~~~~~~~---~~~~~~~LkE~lGHtp~EVl~GallGivia 153 (160)
++|++++++.+.+ +..++++|||.+||||.||++|+++|+++|
T Consensus 81 yDA~GVRr~aG~qA~~lN~l~~~~~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA 141 (141)
T PF02681_consen 81 YDAMGVRRAAGKQAKVLNQLIEELEEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA 141 (141)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence 8899999987655 334557999999999999999999999985
No 2
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=7.6e-45 Score=285.90 Aligned_cols=127 Identities=43% Similarity=0.665 Sum_probs=118.9
Q ss_pred cccchhHHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-
Q 031423 32 FFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI- 110 (160)
Q Consensus 32 ~l~~N~il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~I- 110 (160)
-+++|.+|+++++||+.||++|++++.+|+||+||+.++++|||||||||+|+||+|++|+.+|++||+|++|++||+|
T Consensus 6 ~if~n~~llsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~dS~lFaiA~vfaiIv 85 (153)
T COG1963 6 EIFTNTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLDSPLFAIAAVFAIIV 85 (153)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----------------HHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHHHhhcc
Q 031423 111 ----------------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 111 ----------------vln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia~i~~~ 158 (160)
++|++++++.++.+..+.++|||.+||||.||++|.++||++++++|.
T Consensus 86 m~DA~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~ 149 (153)
T COG1963 86 MYDATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYA 149 (153)
T ss_pred hhhhhhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 889999998766554455679999999999999999999999998763
No 3
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.58 E-value=1.9e-14 Score=107.99 Aligned_cols=96 Identities=28% Similarity=0.444 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423 36 NLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI 115 (160)
Q Consensus 36 N~il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l 115 (160)
|..+.+-+++..+.+++|.++++-||. .+||||+|++..+++++.+.+... +..+..+..+++.++..+
T Consensus 11 ~~~~~~~~~~~~i~~~lK~~~~r~RP~---------~~sFPSgHt~~a~a~a~~l~~~~~-~~~~~~~~~~~a~lv~~S- 79 (109)
T cd03383 11 HVTFVSLLIVIIVVVILKAYFGRGTPL---------EGGMPSGHAAIAFSIATAISLITN-NPIISILSVLLAVMVAHS- 79 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCC---------CCCCChHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH-
Confidence 344677778889999999998766653 258999999999999998887542 222334455666666655
Q ss_pred hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
|-++| |+|.||++|+++|++++.++++
T Consensus 80 ----------------Rvylg~H~psDVlaG~~lG~~~~~~~~~ 107 (109)
T cd03383 80 ----------------RVEMKIHTMWEVVVGAILGALITLLIFK 107 (109)
T ss_pred ----------------HHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77889 9999999999999999987653
No 4
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.52 E-value=1.5e-13 Score=100.60 Aligned_cols=98 Identities=23% Similarity=0.183 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhh
Q 031423 38 PLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVC 117 (160)
Q Consensus 38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~ 117 (160)
.+.+.+++..+.+.+|..+++-||...+ -...+|||+|++..+++++.+....+.. ..-...++++..+...
T Consensus 8 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~----~~~~sfPSgHa~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~s--- 79 (106)
T cd03394 8 LAEAAALTAAVTEGLKFAVGRARPDGSN----NGYRSFPSGHTASAFAAATFLQYRYGWR-WYGIPAYALASLVGAS--- 79 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCCccCcHHHHHHHHHHHHHHHHHcch-HHHHHHHHHHHHHHHH---
Confidence 4567778888899999999887775544 3466999999999999999988877632 2222234444444444
Q ss_pred cCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423 118 EFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 157 (160)
Q Consensus 118 ~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~ 157 (160)
|.++| |+|.||++|.++|.+++++++
T Consensus 80 --------------Rv~~g~H~~sDV~~G~~lG~~~~~~~~ 106 (106)
T cd03394 80 --------------RVVANRHWLSDVLAGAAIGILVGYLVT 106 (106)
T ss_pred --------------HHhcCCcCHHHHHHHHHHHHHheeeeC
Confidence 77888 999999999999999987654
No 5
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.38 E-value=4.6e-12 Score=104.01 Aligned_cols=102 Identities=18% Similarity=0.075 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhccccch-hhhh-ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423 38 PLISAFLAFALAQFLKIFTTWYKEKRWDS-KKML-DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI 115 (160)
Q Consensus 38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~-~~l~-~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l 115 (160)
.+.+.+.+..+.+.+|..+++.+....++ .+.- .+-+|||+||+++++.++.+...++... ..+.+.+++++..+
T Consensus 82 l~~al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l~~~~~~~~--~~~~l~lallVg~S- 158 (190)
T PRK09597 82 VANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKK--YWWLLPLIPLTMLA- 158 (190)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHchhH--HHHHHHHHHHHHHH-
Confidence 35566777778899999999754422222 1111 1359999999999988877666555443 23334455555555
Q ss_pred hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
|.++| |+|.||++|+++|+++++++..
T Consensus 159 ----------------RVYLGvHyPsDVLaG~liGil~~~lf~~ 186 (190)
T PRK09597 159 ----------------RIYLDMHTIGAVLAGLGVGMLCVSLFTS 186 (190)
T ss_pred ----------------HHHhCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 78899 9999999999999999988764
No 6
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.38 E-value=5.4e-12 Score=97.71 Aligned_cols=101 Identities=19% Similarity=0.349 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccc-hhhhh---c-cCCCCchHHHHHHHHHHHHHHHh--CCCch---HHHHHHHHH
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRWD-SKKML---D-SGGMPSSHSATVSALAVAIGLQE--GSGSP---SFAIAVVLA 108 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d-~~~l~---~-sGGMPSSHSA~V~aLat~igl~~--G~~s~---~Faia~v~A 108 (160)
+.+..++..+.+++|..+++-||.... ..... . .-||||+|++..+++++.+.+.. ....+ ...++++++
T Consensus 39 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~SFPSgH~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 118 (151)
T cd03388 39 VVVLALGMYIGQFIKDLFCLPRPSSPPVVRLTMSSAALEYGFPSTHAMNATAISFYLLIYLYDRYQYPFVLGLILALFYS 118 (151)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 445566777889999999988875322 11111 2 33999999999999999888752 21111 223345555
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 109 CILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 109 ~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
+.+..+ |-++| |+|.||++|+++|++++.+.
T Consensus 119 ~~v~~S-----------------RvylgvH~p~DVl~G~~lG~~~~~~~ 150 (151)
T cd03388 119 TLVCLS-----------------RIYMGMHSVLDVIAGSLIGVLILLFR 150 (151)
T ss_pred HHHHHH-----------------HHHhCCCCHHHHHHHHHHHHHHHHHc
Confidence 555555 78999 99999999999999988653
No 7
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.36 E-value=7.3e-12 Score=95.98 Aligned_cols=101 Identities=19% Similarity=0.283 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccc-hhhhh---ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRWD-SKKML---DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQ 114 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d-~~~l~---~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~ 114 (160)
+.+.+++..+.+++|...++-||-..+ ..... ..-+|||+|+++.+++++.+..... .....+.++++.++.-+
T Consensus 39 ~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgH~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~v~~S 116 (144)
T cd03385 39 TIAVAVALLINYIIGLLYFHPRPFVVGLGHNLLPHAADSSFPSDHTTLFFSIAFSLLLRRR--KWAGWILLILALLVAWS 116 (144)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccccccccccCCCCCCCCcHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHH
Confidence 334445666778888777766652111 11111 2359999999999998877654332 12334456666666555
Q ss_pred HhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 115 IVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 115 l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
|-++| |+|.||++|+++|++.+++.+|
T Consensus 117 -----------------Rvylg~H~~sDVl~G~~lg~~~~~~~~~ 144 (144)
T cd03385 117 -----------------RIYLGVHYPLDMLGAALVAVLSALLVFQ 144 (144)
T ss_pred -----------------HHHhCCccHHHHHHHHHHHHHHHHHHhC
Confidence 77899 9999999999999999998875
No 8
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.36 E-value=4.8e-12 Score=99.61 Aligned_cols=100 Identities=23% Similarity=0.277 Sum_probs=71.5
Q ss_pred HHHHHHHHHHhHHHHHHHhhhccccch--hhhhc--cCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423 40 ISAFLAFALAQFLKIFTTWYKEKRWDS--KKMLD--SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI 115 (160)
Q Consensus 40 ~sa~~aw~vAQ~iK~~i~~~~~~~~d~--~~l~~--sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l 115 (160)
.+.+++..+.+++|..+.+-||...+. ....+ .-+|||+|++..+++++.+.+....+..+..+.+.+|..+..+
T Consensus 54 ~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~~~~a~~v~~S- 132 (159)
T cd03391 54 LGLLLDIITVAILKALVRRRRPAYNSPDMLDYVAVDKYSFPSGHASRAAFVARFLLNHLVLAVPLRVLLVLWATVVGIS- 132 (159)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCccchhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 334455567789999998888743322 11222 3499999999999999988876543223444455566665555
Q ss_pred hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
|.++| |.|.||++|+++|++.+++.
T Consensus 133 ----------------Rvylg~H~psDVlaG~~lG~~~~~~~ 158 (159)
T cd03391 133 ----------------RVLLGRHHVLDVLAGAFLGYLEALLV 158 (159)
T ss_pred ----------------HHHhCCcCHHHHHHHHHHHHHHHHhC
Confidence 77888 99999999999999998764
No 9
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.35 E-value=1.1e-11 Score=92.91 Aligned_cols=100 Identities=25% Similarity=0.282 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhccccchhh-hh----ccCCCCchHHHHHHHHHHHHHHHhCCCchHH-HHHHHHHHHH
Q 031423 38 PLISAFLAFALAQFLKIFTTWYKEKRWDSKK-ML----DSGGMPSSHSATVSALAVAIGLQEGSGSPSF-AIAVVLACIL 111 (160)
Q Consensus 38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~-l~----~sGGMPSSHSA~V~aLat~igl~~G~~s~~F-aia~v~A~Iv 111 (160)
.+.+..++..+.+++|..+++-||...+... +. ...+|||+|+++.+++++.+..... .+.+ .+...++..+
T Consensus 18 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v 95 (125)
T cd03393 18 LGLALCASGYLNAALKEVFKIPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLHVR--KKWFTLIGVVLVVLI 95 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 5667778888899999999877774333211 11 2459999999999888777766542 2222 2333344444
Q ss_pred HHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 112 LNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 112 ln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
.-+ |-++| |.|.||++|+++|+.+++++
T Consensus 96 ~~s-----------------Rv~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 96 SFS-----------------RLYLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HHH-----------------HHHhcccCHHHHHHHHHHHHHHHHHh
Confidence 444 77889 99999999999999999875
No 10
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.34 E-value=8.9e-12 Score=97.82 Aligned_cols=99 Identities=29% Similarity=0.221 Sum_probs=64.8
Q ss_pred HHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHH--hCCCch--------HHHHHHHHHHH
Q 031423 41 SAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQ--EGSGSP--------SFAIAVVLACI 110 (160)
Q Consensus 41 sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~--~G~~s~--------~Faia~v~A~I 110 (160)
+.+.+..+.+++|.++++-||-..+.. --...||||+|++.++++++.+.+. ...+.+ ...+..+++..
T Consensus 50 ~~~~~~~~~~~lK~~~~rpRP~~~~~~-~~~~~SFPSgHa~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (159)
T cd03382 50 GLLANEALNYVLKRIIKEPRPCSGAYF-VRSGYGMPSSHSQFMGFFAVYLLLFIYLRLGRLNSLVSRFLLSLGLLLLALL 128 (159)
T ss_pred HHHHHHHHHHHHHHHhCCCCcCCCCcC-CCCCCCCCchhHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHH
Confidence 344556667788888876665322211 1134499999999988877776653 222221 12223444555
Q ss_pred HHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423 111 LLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 157 (160)
Q Consensus 111 vln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~ 157 (160)
+..+ |-++| |+|.||++|.++|++++++++
T Consensus 129 v~~S-----------------Rvylg~H~~~DVl~G~~lG~~~~~~~~ 159 (159)
T cd03382 129 VSYS-----------------RVYLGYHTVSQVVVGAIVGILLGILWF 159 (159)
T ss_pred HHHH-----------------HHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 5554 77899 999999999999999998764
No 11
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.30 E-value=2.3e-11 Score=95.99 Aligned_cols=96 Identities=28% Similarity=0.330 Sum_probs=68.9
Q ss_pred HHHHHHHhHHHHHHHhhhcccc-chhhh---hc---cCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423 43 FLAFALAQFLKIFTTWYKEKRW-DSKKM---LD---SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI 115 (160)
Q Consensus 43 ~~aw~vAQ~iK~~i~~~~~~~~-d~~~l---~~---sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l 115 (160)
+.+..+.+.+|..+++-||... ...+. .. .-+|||+|++..+++++.+.+...-. ....+.+++++.+.-+
T Consensus 67 ~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~~-~~~~~~~~~~~~v~~S- 144 (177)
T cd03395 67 FADQLASGFLKPLVARLRPCNALDGVRLVVLGDQGGSYSFASSHAANSFALALFIWLFFRRG-LFSPVLLLWALLVGYS- 144 (177)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Confidence 3445677899999988887432 22111 21 23999999999999999988753211 2344556666666655
Q ss_pred hhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 116 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 116 ~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
|-++| |+|.||++|+++|+.++.+.
T Consensus 145 ----------------RvylG~H~psDVl~G~~lG~~~~~~~ 170 (177)
T cd03395 145 ----------------RVYVGVHYPGDVIAGALIGIISGLLF 170 (177)
T ss_pred ----------------HHHhCCcCHHHHHHHHHHHHHHHHHH
Confidence 78999 99999999999999998754
No 12
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.26 E-value=6.1e-11 Score=93.27 Aligned_cols=100 Identities=22% Similarity=0.201 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHH--hCCCc-----hHHHHHHHHHHHH
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQ--EGSGS-----PSFAIAVVLACIL 111 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~--~G~~s-----~~Faia~v~A~Iv 111 (160)
+.+.+.+..+.|++|..+++-||...+.. --...+|||+|++..++++..+.+. ..... ...++++.++..+
T Consensus 68 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~-~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 146 (182)
T cd03392 68 LLALLGGGALNTLLKLLVQRPRPPLHLLV-PEGGYSFPSGHAMGATVLYGFLAYLLARRLPRRRVRILLLILAAILILLV 146 (182)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHH
Confidence 34456677888999999988887544321 1124499999999999998877653 22221 2223344444444
Q ss_pred HHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 112 LNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 112 ln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
.-. |.++| |+|.||++|.++|++++.+.
T Consensus 147 ~~s-----------------Rv~lg~H~~sDvl~G~~lG~~~~~~~ 175 (182)
T cd03392 147 GLS-----------------RLYLGVHYPSDVLAGWLLGLAWLALL 175 (182)
T ss_pred HHH-----------------HHHhcccchhHHHHHHHHHHHHHHHH
Confidence 444 77889 99999999999999987654
No 13
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.23 E-value=7.7e-11 Score=91.85 Aligned_cols=102 Identities=24% Similarity=0.211 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhccc-----cchh----------------------hhhccC-CCCchHHHHHHHHHHH
Q 031423 38 PLISAFLAFALAQFLKIFTTWYKEKR-----WDSK----------------------KMLDSG-GMPSSHSATVSALAVA 89 (160)
Q Consensus 38 il~sa~~aw~vAQ~iK~~i~~~~~~~-----~d~~----------------------~l~~sG-GMPSSHSA~V~aLat~ 89 (160)
-+.+..++.++++++|..+.+.||.- +|+. .+-+.+ +|||+||++.++.++.
T Consensus 9 ~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~~~~ 88 (150)
T cd03384 9 FLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYAAVF 88 (150)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHHHHH
Confidence 35566778888999999999888742 2221 111222 9999999999998888
Q ss_pred HHHHh--CC---CchH----H-HHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 90 IGLQE--GS---GSPS----F-AIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 90 igl~~--G~---~s~~----F-aia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
+.+.. .+ ..+. . .+.+++|..+..+ |.++| |+|.||++|+++|++++++.
T Consensus 89 l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~s-----------------Rv~~~~H~~sDviaG~~lG~~~~~~~ 149 (150)
T cd03384 89 LALYLQARLKLRGSRLLRPLLQFLLLALALYVGLS-----------------RISDYKHHWSDVLAGALLGSVIALFL 149 (150)
T ss_pred HHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHh-----------------hhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 87642 11 1111 1 1233444444444 66778 99999999999999999764
No 14
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.18 E-value=2.5e-10 Score=91.58 Aligned_cols=99 Identities=28% Similarity=0.314 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhHHHHHHHhhhccccchhh-----h----hccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 031423 40 ISAFLAFALAQFLKIFTTWYKEKRWDSKK-----M----LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI 110 (160)
Q Consensus 40 ~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~-----l----~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~I 110 (160)
.+...+..+.|.+|..+++-||...+... . -...+|||+|++..+++++.++.... ..-....+++..
T Consensus 76 ~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~~---~~~~~~~~~~~l 152 (186)
T cd03389 76 ATVALSGILVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLFP---RYRWAFILLALL 152 (186)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 34455667778999999877775321100 0 11348999999999999999987652 111222344444
Q ss_pred HHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 111 LLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 111 vln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
+..+ |.++| |+|.||++|+++|++++.+.+.
T Consensus 153 v~~S-----------------Riylg~H~~sDVl~G~~lG~~~~~~~~~ 184 (186)
T cd03389 153 IAFS-----------------RVIVGAHYPSDVIAGSLLGAVTALALYQ 184 (186)
T ss_pred HHHH-----------------HHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 4444 77888 9999999999999999987764
No 15
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=99.18 E-value=1.5e-10 Score=92.81 Aligned_cols=103 Identities=23% Similarity=0.246 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhcccc-----chh-----------------hhhcc--CCCCchHHHHHHHHHHHHHHHh
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSK-----------------KMLDS--GGMPSSHSATVSALAVAIGLQE 94 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-----d~~-----------------~l~~s--GGMPSSHSA~V~aLat~igl~~ 94 (160)
+.+..++.++.+++|..+.+.|+..+ +.. ..... -+|||+|++..++.++.+++..
T Consensus 52 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l 131 (193)
T cd03390 52 LLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLSLYL 131 (193)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHHHHH
Confidence 45556677889999999998888532 110 01122 3899999999999998888632
Q ss_pred --CCC-----chH-----HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 95 --GSG-----SPS-----FAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 95 --G~~-----s~~-----Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
... .+. ..+.+++|+.+..+ |.++| |.|.||++|+++|++++++.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~S-----------------Ri~~g~H~~sDVlaG~~lG~~~a~~~~~ 191 (193)
T cd03390 132 AGKLHIFDPRGSSWRLLLALLPLLLAILVAVS-----------------RTRDYRHHFSDVIAGSLIGLIIAYLSYR 191 (193)
T ss_pred HHHhhcccccchHHHHHHHHHHHHHHHHHHHH-----------------HHhccccCHHHHHHHHHHHHHHHHheeE
Confidence 111 011 12334455555544 67788 9999999999999999998764
No 16
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.17 E-value=1.7e-10 Score=102.01 Aligned_cols=99 Identities=18% Similarity=0.211 Sum_probs=68.8
Q ss_pred HHHHHHHHHhHHHHHHHhhhccccchhhhh--------cc-CCCCchHHHHHHHHHHHHHHHh-C---CCch-H----HH
Q 031423 41 SAFLAFALAQFLKIFTTWYKEKRWDSKKML--------DS-GGMPSSHSATVSALAVAIGLQE-G---SGSP-S----FA 102 (160)
Q Consensus 41 sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~--------~s-GGMPSSHSA~V~aLat~igl~~-G---~~s~-~----Fa 102 (160)
....+..+.|.+|-.+.+-|+......++. .. -||||+||++.++++..+.... . ..++ . .+
T Consensus 43 ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~ 122 (352)
T PLN02525 43 LMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLA 122 (352)
T ss_pred HHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH
Confidence 345566778999999998888643333321 12 2999999999999998776541 1 1111 1 23
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 103 IAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 103 ia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
+++++++.+... |-|+| |+|.||++|+++|++++.+.
T Consensus 123 l~~l~allV~~S-----------------RlYLGvH~psDVl~G~~lG~~i~~~~ 160 (352)
T PLN02525 123 LFCLLVALVGFG-----------------RLYLGMHSPIDIIAGLAIGLVILAFW 160 (352)
T ss_pred HHHHHHHHHHHH-----------------HHheeccCHHHHHHHHHHHHHHHHHH
Confidence 344555555555 88999 99999999999999998754
No 17
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.16 E-value=2.5e-10 Score=83.05 Aligned_cols=103 Identities=29% Similarity=0.356 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccchhh-hh----c----cCCCCchHHHHHHHHHHHHHHHhCCCchH----HHHHH
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKK-ML----D----SGGMPSSHSATVSALAVAIGLQEGSGSPS----FAIAV 105 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~-l~----~----sGGMPSSHSA~V~aLat~igl~~G~~s~~----Faia~ 105 (160)
+.+.+.+..+.+++|..+++.||....... .. . .++|||+|++..++.++.+....+..... .....
T Consensus 6 ~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 85 (129)
T PF01569_consen 6 LFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFAFFLAYYLGSRGWIRILLFLLAI 85 (129)
T ss_dssp HHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHHHHHHHHCCCCHHHSEEHHHHHH
T ss_pred ccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHHhhhhhhhhccccccchhhHHHH
Confidence 445556666678889999876653222111 11 1 35999999999999999998887655443 23344
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 106 VLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 106 v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
.++.++... |.++| |++.||++|.++|..++.+++.
T Consensus 86 ~~~~~v~~s-----------------rv~~g~H~~~Dvi~G~~lg~~~~~~~~~ 122 (129)
T PF01569_consen 86 VLAFLVALS-----------------RVYLGAHFFSDVIAGILLGILIAYLFYR 122 (129)
T ss_dssp HHHHHHHHH-----------------HHHTTSS-HHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhhcC-----------------EEEcCeEehHHHHHHHHHHHHHHHHHHH
Confidence 444443333 66778 9999999999999999987654
No 18
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.11 E-value=9e-10 Score=78.19 Aligned_cols=100 Identities=26% Similarity=0.255 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhHHHHHHHhhhccccchhh--------hhccCCCCchHHHHHHHHHHHHHHHhCCCc---hHHHHHHHHH
Q 031423 40 ISAFLAFALAQFLKIFTTWYKEKRWDSKK--------MLDSGGMPSSHSATVSALAVAIGLQEGSGS---PSFAIAVVLA 108 (160)
Q Consensus 40 ~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~--------l~~sGGMPSSHSA~V~aLat~igl~~G~~s---~~Faia~v~A 108 (160)
.....+..+.+.+|.+..+-|+...+... --...+|||+|++..+++++.+....+-.. ....+...++
T Consensus 10 ~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (122)
T cd01610 10 LALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPRRLLRLLLGLLLLLLA 89 (122)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455789999997766654322211 112459999999999999999998775321 2333344444
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 109 CILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 109 ~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
..+... |-++| |+|.||++|.++|.+++.++
T Consensus 90 ~~~~~s-----------------ri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 90 LLVGLS-----------------RVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HHHHHH-----------------HHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 444444 55677 99999999999999998764
No 19
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.07 E-value=1.9e-09 Score=78.89 Aligned_cols=98 Identities=24% Similarity=0.283 Sum_probs=68.5
Q ss_pred HHHHHHHHhHHHHHHHhhhccccc---------hhhhh-ccCCCCchHHHHHHHHHHHHHHHhC--C-CchHHHHHHHHH
Q 031423 42 AFLAFALAQFLKIFTTWYKEKRWD---------SKKML-DSGGMPSSHSATVSALAVAIGLQEG--S-GSPSFAIAVVLA 108 (160)
Q Consensus 42 a~~aw~vAQ~iK~~i~~~~~~~~d---------~~~l~-~sGGMPSSHSA~V~aLat~igl~~G--~-~s~~Faia~v~A 108 (160)
...+.++.+++|..+++-|+..++ ....- ...++||+|+++.++.++.+..... + +.....+...++
T Consensus 4 ~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (116)
T smart00014 4 AVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPARAARKLLIILLLLLA 83 (116)
T ss_pred HHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 456778889999999988885432 11111 2459999999999999998887532 1 111222334444
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 109 CILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 109 ~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
..+... |.++| |.|.||++|.++|.+++.+.
T Consensus 84 ~~~~~s-----------------Ri~~g~H~~~Dv~~G~~lG~~v~~~~ 115 (116)
T smart00014 84 LVVGFS-----------------RVYLGAHWPSDVLAGSLLGILIAAVL 115 (116)
T ss_pred HHHHHH-----------------HHHhcccCHHHHHHHHHHHHHHHHHc
Confidence 444444 77888 99999999999999998753
No 20
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.05 E-value=1.8e-09 Score=88.32 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhcccc-chhhhh---ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRW-DSKKML---DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQ 114 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-d~~~l~---~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~ 114 (160)
+.+.+++..+.+++|.++++-||-.. +..... ....+||+|++.+++.++.+-+... .....+.+++|+++.-+
T Consensus 65 ~~~~~~~~~~~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l~~~~--~~~~~~~~~~a~lva~S 142 (202)
T PRK11837 65 AIALAISLLVSWTIGHLFPHDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFLFWHR--LWSGSLLMAIAVAIAWS 142 (202)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 34556777788999999987776211 111111 2459999999998887665433221 12333445566666655
Q ss_pred HhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 115 IVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 115 l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
|.++| |.|.||++|+++|++++.+.
T Consensus 143 -----------------RVylGvHypsDVlgG~~lG~~~~~~~ 168 (202)
T PRK11837 143 -----------------RVYLGVHWPLDMLGALLVGMIGCLSA 168 (202)
T ss_pred -----------------HHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 88999 99999999999999998753
No 21
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.01 E-value=1.9e-09 Score=91.41 Aligned_cols=66 Identities=23% Similarity=0.370 Sum_probs=47.4
Q ss_pred CCCchHHHHHHHHHHHH-HHH-hCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHH
Q 031423 74 GMPSSHSATVSALAVAI-GLQ-EGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGC 150 (160)
Q Consensus 74 GMPSSHSA~V~aLat~i-gl~-~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGi 150 (160)
||||+|+++.++++... ++. .......+.+.+++|..+..+ |.++| |+|.||++|.++|.
T Consensus 158 SFPSGHa~~a~~~~l~~~~ll~~~~~~~~~~~~~~wa~~v~~S-----------------RvyLGvH~psDVlaG~llG~ 220 (244)
T PRK10699 158 AFPSGHTMFAASWALLAVGLLWPRRRYKTVALLMLWATGVMGS-----------------RLLLGMHWPRDLVVATLISW 220 (244)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHccCcCHHHHHHHHHHHH
Confidence 99999999987755432 322 221223344556677777666 88999 99999999999999
Q ss_pred HHHHhh
Q 031423 151 VVAFLM 156 (160)
Q Consensus 151 via~i~ 156 (160)
+++.+.
T Consensus 221 ~~~~l~ 226 (244)
T PRK10699 221 LLVTVA 226 (244)
T ss_pred HHHHHH
Confidence 887654
No 22
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.01 E-value=1.9e-09 Score=90.28 Aligned_cols=75 Identities=36% Similarity=0.415 Sum_probs=51.7
Q ss_pred ccC-CCCchHHHHHHHHHHHHHH--HhCCCchHHHHHH-HHHHH--HHHHHhhcCCCCCCCCCCCCccccCC-CChHHHH
Q 031423 71 DSG-GMPSSHSATVSALAVAIGL--QEGSGSPSFAIAV-VLACI--LLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVV 143 (160)
Q Consensus 71 ~sG-GMPSSHSA~V~aLat~igl--~~G~~s~~Faia~-v~A~I--vln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl 143 (160)
++| |||||||..+.-.++...+ +++++...|..-. ++..+ .+-..+ ..+|.+++ ||..||+
T Consensus 92 ~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~laLs~~v------------~~sRVyl~yHt~sQVv 159 (228)
T KOG3146|consen 92 RSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLLALSFYV------------CYSRVYLKYHTLSQVV 159 (228)
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH------------HHHHHHHHhccHHHHH
Confidence 455 9999999999888887666 4566665555432 33222 111111 13488888 9999999
Q ss_pred HHHHHHHHHHHhhc
Q 031423 144 AGGILGCVVAFLMR 157 (160)
Q Consensus 144 ~GallGivia~i~~ 157 (160)
+|+++|.+++.+++
T Consensus 160 ~G~ivG~l~g~~Wf 173 (228)
T KOG3146|consen 160 VGAIVGGLVGILWF 173 (228)
T ss_pred HHHHhhhhHHHHHH
Confidence 99999999997654
No 23
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=98.97 E-value=4e-09 Score=88.80 Aligned_cols=102 Identities=24% Similarity=0.241 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccch--h-------------hhh-ccC-CCCchHHHHHHHHHHHHHHH------hC
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRWDS--K-------------KML-DSG-GMPSSHSATVSALAVAIGLQ------EG 95 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d~--~-------------~l~-~sG-GMPSSHSA~V~aLat~igl~------~G 95 (160)
+.+..++..+-+++|.++.+-||.-|.- . .+. ++| ||||+|+...+++...+... ..
T Consensus 21 ~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~~~l~~~~~~r 100 (235)
T cd03381 21 LWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVMVTALLSHLAGR 100 (235)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3444445447899999998777642210 0 011 234 99999999888877665542 11
Q ss_pred CCchH-----HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423 96 SGSPS-----FAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 157 (160)
Q Consensus 96 ~~s~~-----Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~ 157 (160)
..... ..+...+++.+..+ |-++| |+|.||++|.++|++++.++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~V~~S-----------------RvYLgvHfpsDVlaG~~lGi~~~~~~~ 151 (235)
T cd03381 101 KRSRFLRVMLWLVFWGVQLAVCLS-----------------RIYLAAHFPHQVIAGVISGIAVAETFS 151 (235)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHH-----------------HHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 11111 11112222223333 78999 999999999999999987543
No 24
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=98.94 E-value=7.1e-09 Score=83.44 Aligned_cols=104 Identities=17% Similarity=0.118 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhccccch-------hhh-----h---ccCCCCchHHHHHHHHHHHHHHHhCCCc----
Q 031423 38 PLISAFLAFALAQFLKIFTTWYKEKRWDS-------KKM-----L---DSGGMPSSHSATVSALAVAIGLQEGSGS---- 98 (160)
Q Consensus 38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~-------~~l-----~---~sGGMPSSHSA~V~aLat~igl~~G~~s---- 98 (160)
.+++..++..+.+++|..+++-||...+- ... . ....+||+|++..++++....+......
T Consensus 72 ~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~af~~~~~~~~~~~~~~~~~~ 151 (197)
T cd03396 72 LILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAGFALLALYFLFRRRRPRLAR 151 (197)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHHHHHHHHHHHHHHhcchHHH
Confidence 34445555566788999988877754321 000 1 1339999999999998654443332222
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 99 PSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 99 ~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
....++++++.++... |.+.| |.|+||++|+++|.+++++.|.
T Consensus 152 ~~~~~~~~~~~~vg~s-----------------Ri~~G~Hf~SDvl~g~~ig~~~~~~~~~ 195 (197)
T cd03396 152 LVLAAGLALGALMGLA-----------------RMARGAHFLSDVLWSLLLVWLIALLLYR 195 (197)
T ss_pred HHHHHHHHHHHHHHHH-----------------HHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 2223344555554444 66788 9999999999999999988764
No 25
>PLN02731 Putative lipid phosphate phosphatase
Probab=98.92 E-value=8.1e-09 Score=91.03 Aligned_cols=103 Identities=20% Similarity=0.221 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhcccc-----chhh---------------hhccC--CCCchHHHHHHHHHHHHHHHh-C
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSKK---------------MLDSG--GMPSSHSATVSALAVAIGLQE-G 95 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-----d~~~---------------l~~sG--GMPSSHSA~V~aLat~igl~~-G 95 (160)
+.+..++.++.+++|..+.+.|+.-+ |... .+..| +|||+||+..++..+.+++.. |
T Consensus 123 l~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLslyL~~ 202 (333)
T PLN02731 123 LYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSG 202 (333)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 44556777888999999988877421 1110 12233 999999999999999988743 2
Q ss_pred C----C---c--h--HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 96 S----G---S--P--SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 96 ~----~---s--~--~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
. + . . ...+.+++|+.+.-+ |.+.+ |.|.||++|+++|+++|++.|.
T Consensus 203 kl~~~~~~~~~~rl~l~~lpll~A~lIalS-----------------RV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~ 260 (333)
T PLN02731 203 KIQAFDGKGHVAKLCIVILPLLFAALVGIS-----------------RVDDYWHHWQDVFAGGLLGLAISTICYL 260 (333)
T ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHH-----------------HHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 0 1 112234455555555 33445 9999999999999999987664
No 26
>PLN02250 lipid phosphate phosphatase
Probab=98.90 E-value=8.3e-09 Score=90.17 Aligned_cols=103 Identities=20% Similarity=0.186 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhcccc-----chh----------------hhhccC--CCCchHHHHHHHHHHHHHHHh-
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSK----------------KMLDSG--GMPSSHSATVSALAVAIGLQE- 94 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~-----d~~----------------~l~~sG--GMPSSHSA~V~aLat~igl~~- 94 (160)
+.+..++.++++++|..+.+.|+.-+ |.. ..+..| .|||+||+..++..+.+++..
T Consensus 104 l~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLslyL~ 183 (314)
T PLN02250 104 LFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSLYLS 183 (314)
T ss_pred HHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHHHHHH
Confidence 44556677888999999998887422 111 112223 999999999999999888742
Q ss_pred C----CC---c--h--HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 95 G----SG---S--P--SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 95 G----~~---s--~--~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
+ ++ . . ...+.+++|..+.-+ |.+.+ |.|.||++|+++|++++++.|.
T Consensus 184 ~kl~~~~~~~~~~r~~l~~lpll~A~lVa~S-----------------RI~dy~Hh~sDVlaG~lIG~~~A~~~y~ 242 (314)
T PLN02250 184 GKIRVFDRRGHVAKLCIVFLPLLVAALVGVS-----------------RVDDYWHHWQDVFAGALIGLTVASFCYL 242 (314)
T ss_pred HhhccccccchhHHHHHHHHHHHHHHHHHHH-----------------HHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 2 11 1 1 112234445555544 44555 9999999999999999987654
No 27
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=98.90 E-value=1.8e-08 Score=81.53 Aligned_cols=90 Identities=22% Similarity=0.077 Sum_probs=65.9
Q ss_pred HHHhHHHHHHHhhhccccc---hhhhh-------ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 031423 47 ALAQFLKIFTTWYKEKRWD---SKKML-------DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIV 116 (160)
Q Consensus 47 ~vAQ~iK~~i~~~~~~~~d---~~~l~-------~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~ 116 (160)
.++..+|...++.|+-..+ |..+. ..+++||+|++..+++++.+....+-. +.....++..+..+
T Consensus 107 ~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~~~~S-- 181 (209)
T cd03380 107 IATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAAALVLAELFPER---AAELLARAAEAGNS-- 181 (209)
T ss_pred HHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH--
Confidence 4468899999999986554 43332 367999999999999999999876521 22222333333333
Q ss_pred hcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 117 CEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 117 ~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
|.+.| |+|.+|++|..+|..++-.+
T Consensus 182 ---------------Rv~~G~H~~sDv~aG~~lG~~i~~~~ 207 (209)
T cd03380 182 ---------------RVVAGVHWPSDVEAGRILGEAIAAAL 207 (209)
T ss_pred ---------------hhhCCeecHHHHHHHHHHHHHHHHHH
Confidence 78999 99999999999999997544
No 28
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=98.87 E-value=1.4e-08 Score=77.32 Aligned_cols=68 Identities=29% Similarity=0.463 Sum_probs=51.0
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhCCCch------HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHH
Q 031423 72 SGGMPSSHSATVSALAVAIGLQEGSGSP------SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVA 144 (160)
Q Consensus 72 sGGMPSSHSA~V~aLat~igl~~G~~s~------~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~ 144 (160)
..+|||+|++..++.+..+++....... ...+..+++..+..+ |.++| |+|.||++
T Consensus 133 ~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~~S-----------------Rv~lGvH~~~DVi~ 195 (232)
T COG0671 133 GYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLILLLLLAALVGLS-----------------RVYLGVHYPSDVIG 195 (232)
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-----------------HHhcccccchHHHh
Confidence 4489999999999998888886542221 124445555555555 78899 99999999
Q ss_pred HHHHHHHHHHhh
Q 031423 145 GGILGCVVAFLM 156 (160)
Q Consensus 145 GallGivia~i~ 156 (160)
|.++|++++.+.
T Consensus 196 G~~~g~~~~~~~ 207 (232)
T COG0671 196 GALLGALAALLL 207 (232)
T ss_pred hHHHHHHHHHHH
Confidence 999999998654
No 29
>PLN02715 lipid phosphate phosphatase
Probab=98.84 E-value=1.8e-08 Score=88.66 Aligned_cols=103 Identities=21% Similarity=0.235 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhcc-----ccchhh---------------hhccC--CCCchHHHHHHHHHHHHHHHh-C
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEK-----RWDSKK---------------MLDSG--GMPSSHSATVSALAVAIGLQE-G 95 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~-----~~d~~~---------------l~~sG--GMPSSHSA~V~aLat~igl~~-G 95 (160)
+.+.+++.++++++|..+.+.|+. ++|... .+..| .+||+||+++++.++.+++.. +
T Consensus 129 ~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl~L~~ 208 (327)
T PLN02715 129 LFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSG 208 (327)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 445667778889999999888874 122111 12233 899999999999999988742 2
Q ss_pred C----Cc--h-----HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhcc
Q 031423 96 S----GS--P-----SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 96 ~----~s--~-----~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~ 158 (160)
. +. . +..+.+++|+.+.-+ |.+.+ |.|.||++|+++|++++++.|.
T Consensus 209 kl~~~~~~~~~~k~~l~~lpll~A~lIalS-----------------Rv~Dy~Hh~sDVlaG~lLG~~~a~~~y~ 266 (327)
T PLN02715 209 KIKAFNGEGHVAKLCLVIFPLLAACLVGIS-----------------RVDDYWHHWQDVFAGALIGILVAAFCYR 266 (327)
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHH-----------------HHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 10 0 112234445545544 33445 9999999999999999987664
No 30
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=98.77 E-value=5.5e-08 Score=80.98 Aligned_cols=91 Identities=16% Similarity=0.156 Sum_probs=64.3
Q ss_pred HhHHHHHHHhhhccccchhh---------hhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcC
Q 031423 49 AQFLKIFTTWYKEKRWDSKK---------MLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEF 119 (160)
Q Consensus 49 AQ~iK~~i~~~~~~~~d~~~---------l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~ 119 (160)
.+..|...++.|+-..+... .-..+++||+|++..++.++.++...+-. ....+.++..+.++
T Consensus 117 ~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~---~~~l~~~a~~~g~S----- 188 (232)
T cd03397 117 TYPAKKYYNRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPER---ADEILARGSEYGQS----- 188 (232)
T ss_pred HHHHHhhhCCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-----
Confidence 68899999988885433211 22477999999999999999888765311 11122333334343
Q ss_pred CCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhccC
Q 031423 120 PPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRNS 159 (160)
Q Consensus 120 ~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~~~ 159 (160)
|.+.| |+|++|++|.++|..+...+.++
T Consensus 189 ------------Rv~~GvH~psDV~aG~~lG~~~~a~l~~~ 217 (232)
T cd03397 189 ------------RIVCGVHWPSDVMGGRIMAAALVAALLAD 217 (232)
T ss_pred ------------HHhcCCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 78899 99999999999999997665543
No 31
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=98.51 E-value=1.1e-06 Score=72.71 Aligned_cols=93 Identities=20% Similarity=0.077 Sum_probs=64.5
Q ss_pred HHHhHHHHHHHhhhcccc----------------chhhhh---ccCCCCchHHHHHHHHHHHHHHHhCCCch--------
Q 031423 47 ALAQFLKIFTTWYKEKRW----------------DSKKML---DSGGMPSSHSATVSALAVAIGLQEGSGSP-------- 99 (160)
Q Consensus 47 ~vAQ~iK~~i~~~~~~~~----------------d~~~l~---~sGGMPSSHSA~V~aLat~igl~~G~~s~-------- 99 (160)
..+...|...++.|+-.. +|..+. ...++||+|++..+++++.+....|-+..
T Consensus 100 ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a~a~a~vL~~~~~~~~~~~~~~~~~ 179 (232)
T cd03398 100 IAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFAGAAATVLKALFGSDKVPDTVSEPD 179 (232)
T ss_pred HHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 445678998888777321 132332 35699999999999999999988774321
Q ss_pred ----------HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhh
Q 031423 100 ----------SFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 100 ----------~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~ 156 (160)
.+.....+|..+..+ |.++| |.|.+|.+|..+|..++-.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~a~~~~~S-----------------Rvy~GvH~~sDv~~G~~lG~~va~~v 230 (232)
T cd03398 180 EGGPSTGVTRVWAELNELADEVAIS-----------------RVYAGVHFRSDDAAGAALGEQIGAAA 230 (232)
T ss_pred cCCCCCCCcccHhHHHHHHHHHHHH-----------------HHhccccChHHHHHHHHHHHHHHHHH
Confidence 223223333333333 88999 99999999999999998543
No 32
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=98.26 E-value=2e-06 Score=77.37 Aligned_cols=103 Identities=18% Similarity=0.278 Sum_probs=69.9
Q ss_pred HHHHHHHHhHHHHHHHhhhccccchhhhhc------cCCCCchHHHHHHHHHHH----HHHHhCCCchHHHHHHHHHHHH
Q 031423 42 AFLAFALAQFLKIFTTWYKEKRWDSKKMLD------SGGMPSSHSATVSALAVA----IGLQEGSGSPSFAIAVVLACIL 111 (160)
Q Consensus 42 a~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~------sGGMPSSHSA~V~aLat~----igl~~G~~s~~Faia~v~A~Iv 111 (160)
-..+.-+.|.+|=.+-.-|++.+-..|+-. .-||||+|+++.+|++-. +...+-...|.+.+.+.++...
T Consensus 120 ~~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~~EYG~PStHt~natais~~~~~~ls~~d~~s~p~~~lgl~lv~~y 199 (407)
T KOG2822|consen 120 WVLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTTKEYGMPSTHTMNATAISFYFFLVLSTMDRESYPIQYLGLSLVLLY 199 (407)
T ss_pred HHHHHHHhhhhhheeecCCCCCCCeEEEEeccchhhhhCCCcchhhhhhHHHHHHHHHHHHhchhhhHHHHHHHHHHHHH
Confidence 345667789999999888888776655432 359999999999988876 2233444555444433333321
Q ss_pred HHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHhhc
Q 031423 112 LNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 157 (160)
Q Consensus 112 ln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~i~~ 157 (160)
.-.+. + . |.|.| |+..|+++|.++|+++..+.+
T Consensus 200 ~~lv~--l-------g----RiY~GMHgvlDi~sG~ligvl~~~~~~ 233 (407)
T KOG2822|consen 200 YALVC--L-------G----RIYCGMHGVLDIVSGLLIGVLILILRY 233 (407)
T ss_pred HHHHH--H-------H----HHHhcchHHHHHHhhhHHHHHHhhhhh
Confidence 11110 0 1 78999 999999999999999976543
No 33
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=98.17 E-value=2.4e-05 Score=68.77 Aligned_cols=103 Identities=19% Similarity=0.225 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhcc-----ccchhh-------------hhccC-----------CCCchHHHHHHHHHHH
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEK-----RWDSKK-------------MLDSG-----------GMPSSHSATVSALAVA 89 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~-----~~d~~~-------------l~~sG-----------GMPSSHSA~V~aLat~ 89 (160)
+...++..++..++|..+.++|++ ++|+.. +.-+| .+||+|||+.++-++.
T Consensus 116 lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~~~f 195 (317)
T KOG3030|consen 116 LFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFSFYAMGF 195 (317)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHHHHHHHH
Confidence 444555566679999999999996 566643 22234 6999999999999999
Q ss_pred HHHH-----hCCC-chHHHHHHH-----HHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHHHhhc
Q 031423 90 IGLQ-----EGSG-SPSFAIAVV-----LACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMR 157 (160)
Q Consensus 90 igl~-----~G~~-s~~Faia~v-----~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia~i~~ 157 (160)
++++ ...+ ++..=-.+. +|+.+.-+.+. +++ |-+.||++|+++|+.+|++.+
T Consensus 196 lalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lSRV~---------DYk-------HHwsDV~aG~liG~~~A~~~~ 258 (317)
T KOG3030|consen 196 LALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLSRVS---------DYK-------HHWSDVLAGALIGAFVAYFLY 258 (317)
T ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeeehhc---------ccc-------cccHHHHHHHHHHHHHHHHHH
Confidence 9953 2222 322222222 23333222221 122 889999999999999998754
No 34
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=98.15 E-value=7.8e-06 Score=65.16 Aligned_cols=68 Identities=22% Similarity=0.197 Sum_probs=49.9
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHH
Q 031423 72 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGC 150 (160)
Q Consensus 72 sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGi 150 (160)
.+.|||.|++..+.++..+..... ..+..+..+++..+.-+ +-++| |++.||++|+++|.
T Consensus 116 ~~~fPS~H~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~i~~s-----------------~v~~~~H~~~Dv~~G~~l~~ 176 (186)
T cd03386 116 FNAFPSLHVAWAVLAALFLWRHRR--RLLRWLAVLWPLLIWLS-----------------TLYLGNHYFIDLVGGIALAL 176 (186)
T ss_pred cceeCcHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-----------------HHHHCCccHHHHHHHHHHHH
Confidence 559999999999998888776543 12444455555554444 45667 99999999999999
Q ss_pred HHHHhhcc
Q 031423 151 VVAFLMRN 158 (160)
Q Consensus 151 via~i~~~ 158 (160)
+...+.+.
T Consensus 177 ~~~~~~~~ 184 (186)
T cd03386 177 LSFYLARR 184 (186)
T ss_pred HHHHHhhc
Confidence 98876543
No 35
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=97.69 E-value=0.00045 Score=56.44 Aligned_cols=99 Identities=19% Similarity=0.207 Sum_probs=63.9
Q ss_pred HHHHHHHHHH-HhHHHHHHHhhhccccchhhhh----ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHH-HHHHHHHHH
Q 031423 39 LISAFLAFAL-AQFLKIFTTWYKEKRWDSKKML----DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAI-AVVLACILL 112 (160)
Q Consensus 39 l~sa~~aw~v-AQ~iK~~i~~~~~~~~d~~~l~----~sGGMPSSHSA~V~aLat~igl~~G~~s~~Fai-a~v~A~Ivl 112 (160)
+..++.=+++ -.++|.++.+-|+-+-.++.+- .--.+||+|++=++-++.+..-..-..-|...+ -..||.++-
T Consensus 69 llLgLlfDli~vaivk~~f~R~rP~~t~pS~l~~~t~DiYsFPsGHaSRaamv~~~~l~~a~~a~Plyv~l~~~walvvg 148 (189)
T KOG4268|consen 69 LLLGLLFDLITVAIVKKLFKRRRPYETSPSLLDYLTMDIYSFPSGHASRAAMVSKFFLSHAVLAVPLYVLLLVLWALVVG 148 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 3444444444 3788988887777443333222 355899999976665544332222222244444 577788866
Q ss_pred HHHhhcCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHH
Q 031423 113 NQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAF 154 (160)
Q Consensus 113 n~l~~~~~~~~~~~~~~~LkE~lG-Htp~EVl~GallGivia~ 154 (160)
-+ |..+| |+..||++|+.+|++=+-
T Consensus 149 lS-----------------Rv~lGRHyvtDVlaG~fiGylear 174 (189)
T KOG4268|consen 149 LS-----------------RVMLGRHYVTDVLAGFFIGYLEAR 174 (189)
T ss_pred HH-----------------HHHHhhHHHHHHHHHHHHHHHHHH
Confidence 65 67888 999999999999998764
No 36
>PF14378 PAP2_3: PAP2 superfamily
Probab=96.36 E-value=0.011 Score=46.98 Aligned_cols=62 Identities=24% Similarity=0.208 Sum_probs=38.3
Q ss_pred CCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHH
Q 031423 74 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVV 152 (160)
Q Consensus 74 GMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivi 152 (160)
.|||.|.|...-.+..+.. .+.......+..+++.+++-..+ -.-+|+..|+++|++++.+.
T Consensus 127 afPSlH~a~a~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~stv----------------~~~~HY~iDv~aG~~la~~~ 188 (191)
T PF14378_consen 127 AFPSLHVAWAVLCALALWR-VGRPRWLRALFLAFNVLILFSTV----------------YTGQHYVIDVIAGAALALLA 188 (191)
T ss_pred ccCchHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHHHH----------------HhCcHHHHHHHHHHHHHHHH
Confidence 6999999986655555443 23222223455555555333321 11139999999999998865
No 37
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=85.86 E-value=3.1 Score=29.06 Aligned_cols=64 Identities=23% Similarity=0.117 Sum_probs=35.9
Q ss_pred CCchHHHHHHHHHHHHHHHhCCCchHHH-HHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 031423 75 MPSSHSATVSALAVAIGLQEGSGSPSFA-IAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVA 153 (160)
Q Consensus 75 MPSSHSA~V~aLat~igl~~G~~s~~Fa-ia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia 153 (160)
|.|+|++..+..+..+.....-....+- +..+.+++..--++. + + .|+-.||+.|.++...+=
T Consensus 6 iFSGHt~~~~l~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~ii~---------s-r------~HYTvDV~~a~~it~~~f 69 (74)
T PF14360_consen 6 IFSGHTAFLTLCALFWWEYSPRRFWVLKVIMWLLAIIGSFLIIA---------S-R------KHYTVDVVLAYYITSLVF 69 (74)
T ss_pred EEchhHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHH---------c-C------CCceeehhhHHHHHHHHH
Confidence 6899999988877666655432211111 122222221111110 0 1 299999999998887765
Q ss_pred H
Q 031423 154 F 154 (160)
Q Consensus 154 ~ 154 (160)
.
T Consensus 70 ~ 70 (74)
T PF14360_consen 70 W 70 (74)
T ss_pred H
Confidence 3
No 38
>COG4129 Predicted membrane protein [Function unknown]
Probab=85.40 E-value=1.2 Score=39.53 Aligned_cols=66 Identities=26% Similarity=0.314 Sum_probs=47.4
Q ss_pred CCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 031423 74 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVA 153 (160)
Q Consensus 74 GMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~GallGivia 153 (160)
||+.-+++...+||..++...|++.|.|| .+-|++-+.. -+..-.|+-.+-+.|..+|+++|
T Consensus 10 g~RtlKt~ia~~La~~ia~~l~~~~~~~A--~i~AV~~l~~----------------t~~~s~~~~~~r~~g~~iG~~~a 71 (332)
T COG4129 10 GARTLKTGLAAGLALLIAHLLGLPQPAFA--GISAVLCLSP----------------TIKRSLKRALQRLLGNALGAILA 71 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchHHH--HHHHhhcccC----------------cchHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999999998898887666 3334431111 12222367788999999999998
Q ss_pred Hhhc
Q 031423 154 FLMR 157 (160)
Q Consensus 154 ~i~~ 157 (160)
.+++
T Consensus 72 ~l~~ 75 (332)
T COG4129 72 VLFF 75 (332)
T ss_pred HHHH
Confidence 7654
No 39
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=70.08 E-value=26 Score=29.44 Aligned_cols=53 Identities=9% Similarity=-0.093 Sum_probs=35.8
Q ss_pred cc-ccccchhHHHHHHHHHHHHhH-HHHHHHhhhccccchhhhhccCCCCchHHH
Q 031423 29 SS-LFFPNNLPLISAFLAFALAQF-LKIFTTWYKEKRWDSKKMLDSGGMPSSHSA 81 (160)
Q Consensus 29 ~~-~~l~~N~il~sa~~aw~vAQ~-iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA 81 (160)
|. -+-.+-.+++....+.++.+= ++.+...+.+.+.+.++..+.-+.+.++.-
T Consensus 129 W~gG~DiSGH~FLL~~~sl~L~~E~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (238)
T PF10261_consen 129 WRGGHDISGHVFLLILSSLFLWEESLSPFRRVLDGWAIWNSRISPEDSNRSSEDS 183 (238)
T ss_pred eCCCcCCCccchHHHHHHHHHHHHHHHHHHHHhcccchhhhhccccccccccccc
Confidence 44 344667778888888888866 888777777665555555556666666643
No 40
>PRK11660 putative transporter; Provisional
Probab=69.44 E-value=32 Score=32.17 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=25.5
Q ss_pred HHHHHHHHhHHHHHHHhhhccccch-hhhhc----------cCCCCchHHHHHHHHHH
Q 031423 42 AFLAFALAQFLKIFTTWYKEKRWDS-KKMLD----------SGGMPSSHSATVSALAV 88 (160)
Q Consensus 42 a~~aw~vAQ~iK~~i~~~~~~~~d~-~~l~~----------sGGMPSSHSA~V~aLat 88 (160)
++++....-......+....++.|. ++++. .||||.+++-.-+++..
T Consensus 289 aiv~~iesl~~~~~~~~~~~~~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~srSa~n~ 346 (568)
T PRK11660 289 AMLGAIESLLCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATAAIARSAANV 346 (568)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHhHHHHHHHHhCcccccchHHHHHHHH
Confidence 3344333333344444455566777 34443 67999998755544433
No 41
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=60.67 E-value=62 Score=26.58 Aligned_cols=26 Identities=35% Similarity=0.394 Sum_probs=17.4
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhCCC
Q 031423 72 SGGMPSSHSATVSALAVAIGLQEGSG 97 (160)
Q Consensus 72 sGGMPSSHSA~V~aLat~igl~~G~~ 97 (160)
.||||.+++-.-+++....|-.....
T Consensus 198 ~gg~p~~~s~srs~~~~~~Ga~t~~s 223 (280)
T PF00916_consen 198 FGGMPGSGSFSRSAVNYRAGARTRLS 223 (280)
T ss_pred hcccccccccccchHHHhcCcceeeh
Confidence 56999999977766655555444433
No 42
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=45.78 E-value=78 Score=29.52 Aligned_cols=51 Identities=12% Similarity=0.217 Sum_probs=27.7
Q ss_pred HHHHHHHHHHH-hHHHHHHHhhhccccch-hhhhc----------cCCCCchHHHHHHHHHHHH
Q 031423 39 LISAFLAFALA-QFLKIFTTWYKEKRWDS-KKMLD----------SGGMPSSHSATVSALAVAI 90 (160)
Q Consensus 39 l~sa~~aw~vA-Q~iK~~i~~~~~~~~d~-~~l~~----------sGGMPSSHSA~V~aLat~i 90 (160)
+..++++.+-. ...|.+-. ..+.+.|. ++++. -||||.+|+..-+++....
T Consensus 266 ~~ia~v~~~e~l~~a~~~~~-~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~ 328 (563)
T TIGR00815 266 IAIAIVGLIESIAIARSFAR-MTGYKIDANQELVAQGIANIVGSFFSCYPATGSLSRTAVNAKA 328 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhCCCCCCcHHHHHhhHHHHHHHHhCccCCCCcchHHHHHHhc
Confidence 33444444443 33444433 34456777 34443 5699999988665544433
No 43
>PF06081 DUF939: Bacterial protein of unknown function (DUF939); InterPro: IPR010343 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=44.13 E-value=98 Score=23.72 Aligned_cols=20 Identities=15% Similarity=0.041 Sum_probs=15.4
Q ss_pred CCCChHHHHHHHHHHHHHHH
Q 031423 135 LGHTPLQVVAGGILGCVVAF 154 (160)
Q Consensus 135 lGHtp~EVl~GallGivia~ 154 (160)
.+|--.|++.|+.+|+++=.
T Consensus 120 ~~~r~l~t~iG~~va~lVN~ 139 (141)
T PF06081_consen 120 ALNRVLLTLIGIGVALLVNL 139 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55777888888888887744
No 44
>KOG3142 consensus Prenylated rab acceptor 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.07 E-value=1.6e+02 Score=24.48 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=21.4
Q ss_pred hccccchhhhhccC--CCCchHHHHHHHHHHHHHHHh
Q 031423 60 KEKRWDSKKMLDSG--GMPSSHSATVSALAVAIGLQE 94 (160)
Q Consensus 60 ~~~~~d~~~l~~sG--GMPSSHSA~V~aLat~igl~~ 94 (160)
-.+|+ |+.++..+ .-|.|-+-..+=...-+.+..
T Consensus 35 st~Rp-W~ef~d~~~fs~P~s~s~a~sRi~~Nl~yF~ 70 (187)
T KOG3142|consen 35 STRRP-WSEFFDRSAFSRPRSLSDATSRIKRNLSYFR 70 (187)
T ss_pred hccCC-HHHHHcccccCCCccHHHHHHHHHHHHHHHH
Confidence 34554 99999877 778877665554444444433
No 45
>COG1114 BrnQ Branched-chain amino acid permeases [Amino acid transport and metabolism]
Probab=41.61 E-value=44 Score=31.17 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=35.4
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 031423 71 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQI 115 (160)
Q Consensus 71 ~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l 115 (160)
...|.++.-+.--..-+-.-|+.||+..-...-|++|+.|++|.+
T Consensus 167 ~p~g~~~~a~~~y~~~pf~~GfleGY~TMDaLAal~FgivIv~al 211 (431)
T COG1114 167 PPAGPISAASGAYQSQPFSKGFLEGYLTMDALAALAFGIVIVNAL 211 (431)
T ss_pred CCCCCcccccHHHHhChHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 355666644444555778889999999988888999999999986
No 46
>COG3775 GatC Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]
Probab=39.65 E-value=51 Score=30.84 Aligned_cols=95 Identities=20% Similarity=0.277 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccchhhhhccCCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhc
Q 031423 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCE 118 (160)
Q Consensus 39 l~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~~sGGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~ 118 (160)
++-++++-.+.+++|....-+. +++.+++++-.|--=.|.+ ...++.+.. .+++++++
T Consensus 145 ~~~a~l~avi~~v~~lk~aDw~--~p~v~d~~gl~gis~ptgs---------------~~~~~pi~~-----~~dkii~K 202 (446)
T COG3775 145 LIIALLAAVIHAVLVLKLADWT--APDVQDLFGLEGISIPTGS---------------SANYMPIGM-----LLDKIIEK 202 (446)
T ss_pred HHHHHHHHHHHHHHHHHhcccc--chhHHHhcCCCCCCCCccc---------------ceeccchhh-----hHHHHHHh
Confidence 3445555555566665554222 2244556654443333322 223333333 67888877
Q ss_pred CCCCCC-CCCCCCccccCCCChHHHHHHHHHHHHHHHh
Q 031423 119 FPPDHP-LSSVRPLRELLGHTPLQVVAGGILGCVVAFL 155 (160)
Q Consensus 119 ~~~~~~-~~~~~~LkE~lGHtp~EVl~GallGivia~i 155 (160)
+..-+. ..+.++++...|---.-++.|.++|+++|.+
T Consensus 203 iPgl~k~~~Da~~iqkk~G~fGep~~iG~ilG~~iGil 240 (446)
T COG3775 203 IPGLNKIDFDAETIQKKFGIFGEPMFIGFILGLLIGIL 240 (446)
T ss_pred CcCccccCCCHHHHHhhhcCccchhHHHHHHHHHHHHH
Confidence 643221 2334567888887667789999999999875
No 47
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=38.34 E-value=1e+02 Score=26.20 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHhCCCch-HHHH--HHHHHHHHHH
Q 031423 80 SATVSALAVAIGLQEGSGSP-SFAI--AVVLACILLN 113 (160)
Q Consensus 80 SA~V~aLat~igl~~G~~s~-~Fai--a~v~A~Ivln 113 (160)
++.+++++.+.++...++.+ +.++ +++|+++++|
T Consensus 25 ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~ 61 (301)
T PF14362_consen 25 TALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFN 61 (301)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 45555666666666555555 4443 5777777666
No 48
>PF03611 EIIC-GAT: PTS system sugar-specific permease component; InterPro: IPR004703 This entry represents bacterial transmembrane proteins with a putative sugar-specific permease function, including the IIC component of the PTS system. It has been suggested that this permease may form part of an L-ascorbate utilisation pathway, with proposed specificity for 3-keto-L-gulonate (formed by hydrolysis of L-ascorbate) []. This family includes the IIC component of the galactitol specific GAT family PTS system.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane
Probab=37.03 E-value=75 Score=28.98 Aligned_cols=46 Identities=22% Similarity=0.334 Sum_probs=27.5
Q ss_pred HHHHHhhcC-CC-CCCCCCCCCccccCCCChHHHHHHHHHHHHHHHhh
Q 031423 111 LLNQIVCEF-PP-DHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 111 vln~l~~~~-~~-~~~~~~~~~LkE~lGHtp~EVl~GallGivia~i~ 156 (160)
.+|.+++++ .+ ++...|.++++|.+|=----.+.|+++|++++.+.
T Consensus 189 ~l~~~i~ki~~~~~k~~~e~~~l~k~lg~~~d~~v~g~iig~ii~ii~ 236 (415)
T PF03611_consen 189 WLNWLIGKIFPGKNKISAEPEKLPKKLGFFGDPMVIGFIIGLIIGIIA 236 (415)
T ss_pred HHHHHHHhhcCCCCCCCCCHHHHhhhhhHhcCcHHHHHHHHHHHHHHH
Confidence 455566665 22 22233456788888833344677888888877654
No 49
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=35.51 E-value=1.1e+02 Score=29.09 Aligned_cols=83 Identities=12% Similarity=0.225 Sum_probs=47.6
Q ss_pred CCCCchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCC---CCCCCCC--------CCccccCCCChHH
Q 031423 73 GGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPP---DHPLSSV--------RPLRELLGHTPLQ 141 (160)
Q Consensus 73 GGMPSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~---~~~~~~~--------~~LkE~lGHtp~E 141 (160)
|+..=..=.+.+|...++|+-+. +...-+++.+++.++.|...+.+.+ ..+..+. .-..+.+|=.-.|
T Consensus 58 g~~if~nLpllFAvgia~Glak~-~kg~Aalaa~v~ylv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vlGi~tl~ 136 (524)
T TIGR02005 58 GWTVFRQMPLIFVVGLPIGLAKK-AQGRACLAALMGYLTFNYFINAILTQWGSSFGVNFTQGVGVGVSGLTSIAGIKTLD 136 (524)
T ss_pred HHHHHhcchHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhccccccchhhhcccceec
Confidence 33333445578889999998764 4556677888888766554322111 1000000 0112335522234
Q ss_pred --HHHHHHHHHHHHHhh
Q 031423 142 --VVAGGILGCVVAFLM 156 (160)
Q Consensus 142 --Vl~GallGivia~i~ 156 (160)
|++|.++|++++++.
T Consensus 137 ~gVfgGIi~G~i~a~l~ 153 (524)
T TIGR02005 137 TSIIGAIIISGIITYIH 153 (524)
T ss_pred chhHHHHHHHHHHHHHH
Confidence 899999999999864
No 50
>TIGR00827 EIIC-GAT PTS system, galactitol-specific IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The only characterized member of this family of PTS transporters is the E. coli galactitol transporter. Gat family PTS systems typically have 3 components: IIA, IIB and IIC. This family is specific for the IIC component of the PTS Gat family.
Probab=34.97 E-value=3.7e+02 Score=24.92 Aligned_cols=46 Identities=22% Similarity=0.342 Sum_probs=30.6
Q ss_pred HHHHHhhcCCCC-CCCCCCCCccccCCCChHHHHHHHHHHHHHHHhh
Q 031423 111 LLNQIVCEFPPD-HPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 111 vln~l~~~~~~~-~~~~~~~~LkE~lGHtp~EVl~GallGivia~i~ 156 (160)
.+|.+.+++.-- +.+.+.+++||..|=-=--.+.|.++|+++|.+-
T Consensus 185 ~~n~i~dkIPglnki~~d~~~i~kk~GifGep~viG~iiG~~lGila 231 (407)
T TIGR00827 185 LVDAIIEKIPGIKHWNADADTIQRRFGIFGEPVFIGLVLGLIIGLLA 231 (407)
T ss_pred HHHHHHHhCcCcccCCCCHHHHhhhheeccchHHHHHHHHHHHHHHh
Confidence 678887776321 1122346789999954455778888888888653
No 51
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.46 E-value=40 Score=26.15 Aligned_cols=18 Identities=17% Similarity=0.534 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 031423 139 PLQVVAGGILGCVVAFLM 156 (160)
Q Consensus 139 p~EVl~GallGivia~i~ 156 (160)
-+|-++|.++|..+|++.
T Consensus 49 ssefIsGilVGa~iG~ll 66 (116)
T COG5336 49 SSEFISGILVGAGIGWLL 66 (116)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 478999999999999864
No 52
>PF06081 DUF939: Bacterial protein of unknown function (DUF939); InterPro: IPR010343 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=28.71 E-value=1.6e+02 Score=22.59 Aligned_cols=26 Identities=31% Similarity=0.323 Sum_probs=18.4
Q ss_pred chHHHHHHHHHHHHHHHhCCCchHHH
Q 031423 77 SSHSATVSALAVAIGLQEGSGSPSFA 102 (160)
Q Consensus 77 SSHSA~V~aLat~igl~~G~~s~~Fa 102 (160)
.--++..++++..++...+.+.|.++
T Consensus 7 ~iKtaiA~~la~~ia~~l~~~~~~~A 32 (141)
T PF06081_consen 7 TIKTAIAAFLAILIAQLLGLQYPFFA 32 (141)
T ss_pred HHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 34467788888888887777666554
No 53
>PRK11492 hyfE hydrogenase 4 membrane subunit; Provisional
Probab=27.70 E-value=3.6e+02 Score=22.50 Aligned_cols=63 Identities=11% Similarity=0.110 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH--------HHHHHhhcCCCCCCCCCCCCccccCCCChHHHHHHHHH
Q 031423 78 SHSATVSALAVAIGLQEGSGSPSFAIAVVLACI--------LLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGIL 148 (160)
Q Consensus 78 SHSA~V~aLat~igl~~G~~s~~Faia~v~A~I--------vln~l~~~~~~~~~~~~~~~LkE~lGHtp~EVl~Gall 148 (160)
-+|-.-.+++..+|..++ ++...+..+.+++ .+++.++++..+. +.+..+|+.++=+++++++
T Consensus 36 ~Qs~~L~~~~~~~~~~~~--~~~L~~~a~~~l~~K~iliP~lL~r~~~k~~~~r------e~~p~i~~~~s~ll~~~~~ 106 (216)
T PRK11492 36 LQSLVLVSIFLTLSCLFA--AEELLIWSITAFITKVLLVPLIMTYAARKLGDNI------EEEPVFGPAMSILLAALIV 106 (216)
T ss_pred HHHHHHHHHHHHHHHhCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc------ccccccchHHHHHHHHHHH
Confidence 356666667777777765 4555544444444 6677776665432 2245666666655554433
No 54
>KOG0682 consensus Ammonia permease [Inorganic ion transport and metabolism]
Probab=26.71 E-value=2.5e+02 Score=26.84 Aligned_cols=44 Identities=9% Similarity=0.159 Sum_probs=33.0
Q ss_pred Ccccccccch-hHHHHHHHHHHHHhHHHHHHHhhhccccchhhhh
Q 031423 27 SSSSLFFPNN-LPLISAFLAFALAQFLKIFTTWYKEKRWDSKKML 70 (160)
Q Consensus 27 ~~~~~~l~~N-~il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l~ 70 (160)
|..-+.+-.. ...+...+|-..+.+.=.+++|+++|||+...+.
T Consensus 248 S~~~i~~~~~~~a~vnT~Ls~a~gglt~~~~d~~~~~kwsv~~~c 292 (500)
T KOG0682|consen 248 SFYAINLRSWARAAVNTILSGATGGLTWLIIDYLRHGKWSVIGLC 292 (500)
T ss_pred ccccccchhHHHHHHHHHHHHhhhhhhhhhhhhhhcCCcchhhhH
Confidence 3344444455 7777778888888999999999999999986543
No 55
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)). They function by a Na+ or H+ symport mechanism and display 12 putative transmembrane helical spanners.; GO: 0015658 branched-chain aliphatic amino acid transmembrane transporter activity, 0015803 branched-chain aliphatic amino acid transport, 0016021 integral to membrane
Probab=25.04 E-value=2.6e+02 Score=25.82 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhh
Q 031423 84 SALAVAIGLQEGSGSPSFAIAVVLACILLNQIVC 117 (160)
Q Consensus 84 ~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~ 117 (160)
..-+-.-|+.+|+..-.-.-+++|+.++++.+-+
T Consensus 178 ~~~~f~~Gf~eGY~TMD~laal~Fg~iIi~~i~~ 211 (427)
T PF05525_consen 178 ASNPFFKGFLEGYQTMDALAALAFGIIIINAIRQ 211 (427)
T ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 4455677899999998888899999999999743
No 56
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=23.97 E-value=3.7e+02 Score=21.31 Aligned_cols=77 Identities=25% Similarity=0.238 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhccccchhhh-h--ccC--CCCchHHHHHHHHHH-----HHHHHhCCCchHHHHHHHH
Q 031423 38 PLISAFLAFALAQFLKIFTTWYKEKRWDSKKM-L--DSG--GMPSSHSATVSALAV-----AIGLQEGSGSPSFAIAVVL 107 (160)
Q Consensus 38 il~sa~~aw~vAQ~iK~~i~~~~~~~~d~~~l-~--~sG--GMPSSHSA~V~aLat-----~igl~~G~~s~~Faia~v~ 107 (160)
.++++.++.+++-.+-..-.++-.|--|..+- + +.| |+.|-||--=..+|. .+|+..|+ -++.++.++
T Consensus 41 L~ls~~l~~mig~yl~~~~rr~~~rPED~~daEI~dgAGe~GfFsP~SwWPl~la~~~al~~lGla~g~--Wl~~iG~~~ 118 (137)
T PF12270_consen 41 LVLSGGLALMIGFYLRFTARRIGPRPEDREDAEIADGAGELGFFSPHSWWPLVLAAAAALVFLGLAFGW--WLILIGAVL 118 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCCcCcCCCccHhHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 35566666666666655555554444444221 1 244 999999964333333 34445564 556666666
Q ss_pred HHHHHHHHh
Q 031423 108 ACILLNQIV 116 (160)
Q Consensus 108 A~Ivln~l~ 116 (160)
.++-+--++
T Consensus 119 ~i~~~~G~v 127 (137)
T PF12270_consen 119 LIVAVVGWV 127 (137)
T ss_pred HHHHHHHHh
Confidence 555444433
No 57
>COG4803 Predicted membrane protein [Function unknown]
Probab=23.80 E-value=30 Score=28.35 Aligned_cols=30 Identities=27% Similarity=0.469 Sum_probs=26.0
Q ss_pred CCccccCCCChHHHHHHHHHHHHHHHhhcc
Q 031423 129 RPLRELLGHTPLQVVAGGILGCVVAFLMRN 158 (160)
Q Consensus 129 ~~LkE~lGHtp~EVl~GallGivia~i~~~ 158 (160)
.++|..+--|-.-.+.|+++|.++|++|.|
T Consensus 49 vklkQ~~Nlt~aGa~sGafWG~LiGllFl~ 78 (170)
T COG4803 49 VKLKQLMNLTGAGAVSGAFWGMLIGLLFLN 78 (170)
T ss_pred eeHHHHhhhhhhccccccHHHHHHHHHHHh
Confidence 467888888888889999999999999876
No 58
>PRK00523 hypothetical protein; Provisional
Probab=23.59 E-value=41 Score=24.08 Aligned_cols=40 Identities=10% Similarity=0.298 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCcccc---CCCChHHH
Q 031423 103 IAVVLACILLNQIVCEFPPDHPLSSVRPLREL---LGHTPLQV 142 (160)
Q Consensus 103 ia~v~A~Ivln~l~~~~~~~~~~~~~~~LkE~---lGHtp~EV 142 (160)
+.++.++.+..+..++..+++|..+++-+|+. .|-+|+|-
T Consensus 17 ~G~~~Gffiark~~~k~l~~NPpine~mir~M~~QMGqKPSek 59 (72)
T PRK00523 17 VGGIIGYFVSKKMFKKQIRENPPITENMIRAMYMQMGRKPSES 59 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCHHHHHHHHHHhCCCccHH
Confidence 33444444444444443344443333445554 47888873
No 59
>PRK11089 PTS system glucose-specific transporter subunits IIBC; Provisional
Probab=23.50 E-value=2.1e+02 Score=26.80 Aligned_cols=75 Identities=23% Similarity=0.347 Sum_probs=46.1
Q ss_pred CchHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhcCCCC-CCCCCCCCccccCCCChHH--HHHHHHHHHHH
Q 031423 76 PSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACILLNQIVCEFPPD-HPLSSVRPLRELLGHTPLQ--VVAGGILGCVV 152 (160)
Q Consensus 76 PSSHSA~V~aLat~igl~~G~~s~~Faia~v~A~Ivln~l~~~~~~~-~~~~~~~~LkE~lGHtp~E--Vl~GallGivi 152 (160)
.=..=...+|...++|+-+. ...-+++.+++.+++|...+.+.+. ... .-.+.+|.+..+ |+.|.+.|.+.
T Consensus 55 if~nLpllFavgia~g~ak~--~g~aal~~~v~yl~~~~~~~~~~~~~~~~----~~~~~~g~~~l~~~VfggIi~g~i~ 128 (477)
T PRK11089 55 VFANMPLIFAIGVALGFTNN--DGVSALAAVVAYGIMVKTMAVVAPLVLHL----PAEEIAAKHLADTGVLGGIIAGAIA 128 (477)
T ss_pred HHhccHHHHHHHHHHHHhcc--chhhHHHHHHHHHHHHHHHHHHHHhhccc----chhhhccccccccchHHHHHHHHHH
Confidence 33444578899999999874 4567778888888776654322110 000 012234532233 89999999999
Q ss_pred HHhh
Q 031423 153 AFLM 156 (160)
Q Consensus 153 a~i~ 156 (160)
++++
T Consensus 129 a~l~ 132 (477)
T PRK11089 129 AYMF 132 (477)
T ss_pred HHHH
Confidence 8854
No 60
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=21.28 E-value=32 Score=24.13 Aligned_cols=15 Identities=40% Similarity=0.470 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHH
Q 031423 140 LQVVAGGILGCVVAF 154 (160)
Q Consensus 140 ~EVl~GallGivia~ 154 (160)
.||++|.+.|.+++.
T Consensus 8 ~~vlaavIaG~Vvgl 22 (64)
T PF01034_consen 8 SEVLAAVIAGGVVGL 22 (64)
T ss_dssp ---------------
T ss_pred chHHHHHHHHHHHHH
Confidence 455555555555543
No 61
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=20.65 E-value=2.6e+02 Score=25.86 Aligned_cols=26 Identities=23% Similarity=0.199 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHhCCCchHHHHHH
Q 031423 80 SATVSALAVAIGLQEGSGSPSFAIAV 105 (160)
Q Consensus 80 SA~V~aLat~igl~~G~~s~~Faia~ 105 (160)
++..+.+|..+++..++..|+.+.-.
T Consensus 8 ~~lA~~lAl~ia~~l~l~~p~WA~~t 33 (650)
T PF04632_consen 8 TALAAMLALYIAFWLQLPHPYWAAMT 33 (650)
T ss_pred HHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 46778888889999999999888644
No 62
>PRK00376 lspA lipoprotein signal peptidase; Reviewed
Probab=20.08 E-value=4.4e+02 Score=20.73 Aligned_cols=15 Identities=20% Similarity=0.129 Sum_probs=10.3
Q ss_pred HHHHHhHHHHHHHhh
Q 031423 45 AFALAQFLKIFTTWY 59 (160)
Q Consensus 45 aw~vAQ~iK~~i~~~ 59 (160)
...+=|..|..+...
T Consensus 18 ~~~lDq~tK~~~~~~ 32 (160)
T PRK00376 18 VIILDQLSKYLVLQN 32 (160)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333459999988753
Done!