Query 031424
Match_columns 160
No_of_seqs 123 out of 1046
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 13:54:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031424.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031424hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03216 actin depolymerizing 100.0 1.7E-44 3.6E-49 268.6 15.4 137 24-160 5-141 (141)
2 cd00013 ADF Actin depolymerisa 100.0 2.4E-38 5.1E-43 231.6 14.9 132 27-159 1-132 (132)
3 KOG1735 Actin depolymerizing f 100.0 5.4E-39 1.2E-43 237.1 11.1 135 25-159 1-140 (146)
4 PF00241 Cofilin_ADF: Cofilin/ 100.0 2.7E-37 5.8E-42 224.8 13.6 127 33-160 1-127 (127)
5 smart00102 ADF Actin depolymer 100.0 6.4E-36 1.4E-40 218.2 14.4 127 33-160 1-127 (127)
6 PTZ00152 cofilin/actin-depolym 100.0 3.1E-34 6.7E-39 208.4 7.5 114 25-150 1-118 (122)
7 KOG1736 Glia maturation factor 99.9 5.4E-26 1.2E-30 162.6 11.2 132 28-160 7-141 (143)
8 KOG1747 Protein tyrosine kinas 99.9 2.2E-23 4.7E-28 169.1 10.9 136 22-160 168-311 (342)
9 KOG1747 Protein tyrosine kinas 99.9 1.3E-23 2.9E-28 170.3 8.7 127 24-159 2-135 (342)
10 KOG3655 Drebrins and related a 99.7 1.7E-17 3.7E-22 141.5 11.9 129 27-160 5-134 (484)
11 cd03377 TPP_PFOR_PNO Thiamine 50.8 30 0.00066 29.7 4.7 73 9-91 257-334 (365)
12 PRK11865 pyruvate ferredoxin o 47.4 41 0.00088 28.1 4.8 43 10-58 202-244 (299)
13 PF08261 Carcinustatin: Carcin 41.0 10 0.00022 14.4 0.2 7 5-11 2-8 (8)
14 cd01215 Dab Disabled (Dab) Pho 40.4 1.5E+02 0.0033 22.0 7.1 95 4-115 3-105 (139)
15 PRK11864 2-ketoisovalerate fer 30.9 1.2E+02 0.0026 25.3 5.1 70 10-91 198-273 (300)
16 PF11341 DUF3143: Protein of u 27.8 74 0.0016 20.4 2.6 29 107-135 31-60 (63)
17 PRK09798 antitoxin MazE; Provi 27.3 1.9E+02 0.0042 19.2 5.6 54 26-85 12-66 (82)
18 KOG0444 Cytoskeletal regulator 27.2 1.4E+02 0.0029 28.5 5.1 49 85-136 527-575 (1255)
19 PF03400 DDE_Tnp_IS1: IS1 tran 24.6 1.5E+02 0.0033 21.6 4.2 45 44-88 16-61 (131)
20 PRK11347 antitoxin ChpS; Provi 24.3 2.2E+02 0.0049 18.9 5.3 54 26-86 11-64 (83)
21 KOG2130 Phosphatidylserine-spe 24.2 65 0.0014 27.5 2.4 38 27-65 192-229 (407)
22 KOG4392 RNA polymerase, subuni 21.9 1.1E+02 0.0025 21.9 2.9 63 47-126 27-91 (117)
23 smart00462 PTB Phosphotyrosine 21.1 2.9E+02 0.0063 19.0 6.5 49 10-58 3-53 (134)
No 1
>PLN03216 actin depolymerizing factor; Provisional
Probab=100.00 E-value=1.7e-44 Score=268.58 Aligned_cols=137 Identities=91% Similarity=1.439 Sum_probs=129.7
Q ss_pred hcCcCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCceEEEEEeeeeeCCCCcc
Q 031424 24 QATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK 103 (160)
Q Consensus 24 ~~~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~pry~vy~~~~~~~~~~~~ 103 (160)
|++|||+++++|.++|++|+.++.+|||+|+|++++++|+|++.+..+.+|+||++.||+++|||++||+++.+++|+.+
T Consensus 5 m~~SGi~v~~~c~~~f~~lk~~k~~r~iifkI~~~~~~ivv~~~~~~~~~~~d~~~~L~~~~~rY~vyd~~~~~~~g~~~ 84 (141)
T PLN03216 5 MATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAASLPTDDCRYAVFDFDFVTVDNCRK 84 (141)
T ss_pred ecCCCCeeCHHHHHHHHHHHhCCCceEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCCCCCeEEEEEeEeccCCCCcc
Confidence 55899999999999999999887789999999998889999887655678999999999999999999999999999999
Q ss_pred ccEEEEEEcCCCCCccchhhhhhcHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 031424 104 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 160 (160)
Q Consensus 104 ~klvfI~w~Pd~a~vk~KMlYsssk~~lk~~l~gi~~~i~a~d~~dl~~~~i~~kl~ 160 (160)
+|++||+|||++|++|.||+|||+|++|++.|+|+++++||+|.+||+++.+.+|++
T Consensus 85 ~klvFI~w~Pd~a~vk~KMlYAssK~~lk~~l~gi~~~iqatd~~el~~~~~~~~~~ 141 (141)
T PLN03216 85 SKIFFIAWSPEASRIRAKMLYATSKDGLRRVLDGVHYELQATDPTEMGFDVIRDRAK 141 (141)
T ss_pred cCEEEEEECCCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEECChHhcCHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999974
No 2
>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments.
Probab=100.00 E-value=2.4e-38 Score=231.64 Aligned_cols=132 Identities=46% Similarity=0.891 Sum_probs=123.9
Q ss_pred cCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCceEEEEEeeeeeCCCCccccE
Q 031424 27 TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKI 106 (160)
Q Consensus 27 SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~pry~vy~~~~~~~~~~~~~kl 106 (160)
||+++++++.++|++++.+++++|++|+|+.++++|+++++|....++++|.+.||+++|||++||+++.++ |+.++|+
T Consensus 1 sgi~i~~e~~~a~~~~~~~~~~~~vi~~i~~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~y~~~~~~~~~~-~~~~~k~ 79 (132)
T cd00013 1 SGIKVSDECKEAFEELKSGKKTRWIIFKIDDDKKEIVVEKTGEGGESFDEFVEELPEDECRYALYDYDFTTE-GSKKSKI 79 (132)
T ss_pred CCceECHHHHHHHHHHHhCCceeEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCcCCceEEEEEecccCC-CccccCE
Confidence 699999999999999998867999999999987899999888644589999999999999999999998766 7889999
Q ss_pred EEEEEcCCCCCccchhhhhhcHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 031424 107 FFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 159 (160)
Q Consensus 107 vfI~w~Pd~a~vk~KMlYsssk~~lk~~l~gi~~~i~a~d~~dl~~~~i~~kl 159 (160)
+||+|||++|++|+||+|||+|.+|++.++|+++++++++.+||+++.+.+||
T Consensus 80 vfI~w~P~~a~~k~km~yas~k~~l~~~l~~~~~~i~a~~~~dl~~~~i~~kl 132 (132)
T cd00013 80 VFIYWSPETAPVKSKMLYASSKAALKRELVGIQVEVQATDPDELDEEALLEKL 132 (132)
T ss_pred EEEEECCCCCChhhhhhhHHHHHHHHHhcCCceEEEEECChhhcCHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999986
No 3
>KOG1735 consensus Actin depolymerizing factor [Cytoskeleton]
Probab=100.00 E-value=5.4e-39 Score=237.10 Aligned_cols=135 Identities=53% Similarity=0.973 Sum_probs=127.8
Q ss_pred cCcCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCC---CCCceEEEEEeeeeeCC--
Q 031424 25 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLP---DDDCRYAVFDFDFVTVD-- 99 (160)
Q Consensus 25 ~~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~---~~~pry~vy~~~~~~~~-- 99 (160)
++||++++|+|+..|++|+.++.+|+++|+|+++.++|++++.|+.+.+|++|...|| .++|||++||++|++..
T Consensus 1 ~aSGv~Vsde~~~~F~elk~kk~~r~ivF~i~~~~~~i~ve~~g~~~~s~~~f~~~l~~~~~~dCrYA~yDf~f~t~~~g 80 (146)
T KOG1735|consen 1 MASGVAVSDECKKVFNELKVKKRKRYVVFKISEDKKQIIVEKGGSPGASYDDFVASLPKMPEKDCRYALYDFEFETKESG 80 (146)
T ss_pred CCcceEecHHHHHHHHHHHhhcceeEEEEEeccccccccccccCCCCCchhhhHHHhccCCccccceEEecceEEeeccc
Confidence 4799999999999999999998999999999998889999999988899999999999 99999999999998843
Q ss_pred CCccccEEEEEEcCCCCCccchhhhhhcHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 031424 100 NCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 159 (160)
Q Consensus 100 ~~~~~klvfI~w~Pd~a~vk~KMlYsssk~~lk~~l~gi~~~i~a~d~~dl~~~~i~~kl 159 (160)
...++|++||.|||++|++|+||+|||||++|+++|.|+++++||||++|++++.+++||
T Consensus 81 ~~~~~Ki~f~~wsPd~a~vKsKMiYaSSkDalkr~L~Gi~~elQatd~~E~~~~~~~ekl 140 (146)
T KOG1735|consen 81 NCKKSKIFFIAWSPDTAPVKSKMIYASSKDALKRELTGIQHELQATDPSEMSLDSLAEKL 140 (146)
T ss_pred cceeeeEEEEEECCCccchhhheeehhhHHHHhhhccCceeeeecCChHHhhHHHHHHHh
Confidence 347889999999999999999999999999999999999999999999999999999987
No 4
>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma. ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....
Probab=100.00 E-value=2.7e-37 Score=224.84 Aligned_cols=127 Identities=42% Similarity=0.842 Sum_probs=118.9
Q ss_pred HHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCceEEEEEeeeeeCCCCccccEEEEEEc
Q 031424 33 DECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWA 112 (160)
Q Consensus 33 ~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~pry~vy~~~~~~~~~~~~~klvfI~w~ 112 (160)
|||.++|++++.+++++|++|+|++++++|+++++|+...++++|.+.||+++|||++||+.+.++ |+.++|++||+||
T Consensus 1 ~e~~~~~~~~~~~~~~~~i~~~i~~~~~~i~v~~~g~~~~~~~el~~~l~~~~p~y~~~~~~~~~~-~~~~~k~vfI~w~ 79 (127)
T PF00241_consen 1 DECKAAFQELKSKKSTRWIIFKIDDEKEEIVVEKSGSEGGSFDELLSHLPDDEPRYILYRFEYTHK-GSRRSKLVFIYWC 79 (127)
T ss_dssp HHHHHHHHHHHTTTSCSEEEEEEETTSTEEEEEEEEEESSHHHHHHHCSCTTSEEEEEEEEEEEET-TSEEEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCCceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhcccCCcEEEEEEeeeccc-CCCCceEEEEEEe
Confidence 789999999999977999999999988899999988556789999999999999999999999876 7889999999999
Q ss_pred CCCCCccchhhhhhcHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 031424 113 PTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 160 (160)
Q Consensus 113 Pd~a~vk~KMlYsssk~~lk~~l~gi~~~i~a~d~~dl~~~~i~~kl~ 160 (160)
|++|++|+||+|||+|++|++.++|++.++|++|.+||+++.|++||+
T Consensus 80 P~~~~vk~km~yas~k~~l~~~l~~~~~~~~~~d~~dl~~~~i~~kl~ 127 (127)
T PF00241_consen 80 PDNAPVKEKMLYASSKASLKKKLGGIHIEIQASDPDDLSEEEILEKLK 127 (127)
T ss_dssp STTS-HHHHHHHHHHHHHHHHHCTTEEEEEEESSGGGGSHHHHHHHH-
T ss_pred cCCccHHHhhhhHHhHHHHHHHhCCceEEEEECChHHCCHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999985
No 5
>smart00102 ADF Actin depolymerisation factor/cofilin -like domains. Severs actin filaments and binds to actin monomers.
Probab=100.00 E-value=6.4e-36 Score=218.22 Aligned_cols=127 Identities=42% Similarity=0.845 Sum_probs=118.2
Q ss_pred HHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCceEEEEEeeeeeCCCCccccEEEEEEc
Q 031424 33 DECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWA 112 (160)
Q Consensus 33 ~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~pry~vy~~~~~~~~~~~~~klvfI~w~ 112 (160)
++|.++|++++.+++.+|++|+|+.++++|+++++|..+.++++|.+.||+++|||++||++++++ ++.++|++||+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~el~~~l~~~~~ry~~~~~~~~~~-~~~~~k~vfI~w~ 79 (127)
T smart00102 1 EDCKEAFNELKKKRKHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYDYKFTTE-ESKKSKIVFIFWS 79 (127)
T ss_pred ChHHHHHHHHHcCCCceEEEEEEecCCCEEEEEecCCCCCCHHHHHHhCCccCceEEEEEeecccC-CCccccEEEEEEC
Confidence 478999999998777999999999988899999887656789999999999999999999998775 5678999999999
Q ss_pred CCCCCccchhhhhhcHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 031424 113 PTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 160 (160)
Q Consensus 113 Pd~a~vk~KMlYsssk~~lk~~l~gi~~~i~a~d~~dl~~~~i~~kl~ 160 (160)
|++|++|.||+|||++.+|++.++|++..+++++.+||+++.|.+||+
T Consensus 80 P~~a~~~~km~yas~k~~l~~~l~~~~~~i~~~~~~el~~~~i~~kl~ 127 (127)
T smart00102 80 PDGAPVKSKMLYASSKDTLKKELGGIQVEVQATDEDDLDEEALKEKLK 127 (127)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCceEEEEECChhhcCHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999985
No 6
>PTZ00152 cofilin/actin-depolymerizing factor 1-like protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=208.39 Aligned_cols=114 Identities=30% Similarity=0.571 Sum_probs=100.9
Q ss_pred cCcCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCC---ceEEEEEeeeeeCCCC
Q 031424 25 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD---CRYAVFDFDFVTVDNC 101 (160)
Q Consensus 25 ~~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~---pry~vy~~~~~~~~~~ 101 (160)
|+|||+++++|.++|++|+.++.+||++|+|++ ++|+|++.++ +.+|++|++.||+++ |||++|+++
T Consensus 1 m~SGi~v~de~~~~f~~lk~~k~~r~iifkI~~--~~Ivv~~~~~-~~~~~e~~~~L~~~~~~~crY~vyd~~------- 70 (122)
T PTZ00152 1 MISGIRVNDNCVTEFNNMKIRKTCRWIIFVIEN--CEIIIHSKGA-TTTLTELVGSIDKNDKIQCAYVVFDAV------- 70 (122)
T ss_pred CCCCcCcCHHHHHHHHHHhcCCcceEEEEEEcC--cEEEEEecCC-CCCHHHHHHhccccCCCCceEEEEccC-------
Confidence 479999999999999999988889999999975 5899998876 468999999999987 999999873
Q ss_pred ccccEEEEEEcCCCCCccchhhhhhcHHHHHHhcCCee-EEEEeCCCCCC
Q 031424 102 RKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH-YEVQATDPTEM 150 (160)
Q Consensus 102 ~~~klvfI~w~Pd~a~vk~KMlYsssk~~lk~~l~gi~-~~i~a~d~~dl 150 (160)
++++||+|||++|++|.||+|||||++|+++++|++ ...|+++.+|+
T Consensus 71 --~klvFI~w~Pd~a~ik~KMlYASsK~~l~~~l~Gi~~~~~~~~~~~~~ 118 (122)
T PTZ00152 71 --NKIHFFMYARESSNSRDRMTYASSKQALLKKIEGVNVLTSVIESAQDV 118 (122)
T ss_pred --CCEEEEEECCCCCChHHhhhhHhHHHHHHHHhcchhHHHHHHHHhhhh
Confidence 479999999999999999999999999999999875 34566666665
No 7
>KOG1736 consensus Glia maturation factor beta [Extracellular structures]
Probab=99.94 E-value=5.4e-26 Score=162.59 Aligned_cols=132 Identities=19% Similarity=0.356 Sum_probs=119.9
Q ss_pred CcccCHHHHHHHHHhhcc-C--CeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCceEEEEEeeeeeCCCCccc
Q 031424 28 GMWVADECKNSFMEMKWK-K--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS 104 (160)
Q Consensus 28 Gi~i~~e~~~a~~~lk~~-~--~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~pry~vy~~~~~~~~~~~~~ 104 (160)
-.+|+++..+.++++|-+ + ...+++++|+.++..|+++...-...+.+|+.+.||+.+|||++|.|.++++||+..+
T Consensus 7 ~~~i~~et~~ki~kFR~r~k~t~~~A~imKidK~~~eiV~d~Eeld~is~eEladeLpe~~PRFvl~sYpt~t~DGr~st 86 (143)
T KOG1736|consen 7 VCKIGTETREKIRKFRFRTKETSNAAIIMKIDKDSYEIVLDEEELDEISPEELADELPERQPRFVLYSYPTTTDDGRVST 86 (143)
T ss_pred EEEeCHHHHHHHHHhhhhhccccceeEEEEecCCceEeecCHHHhccCChHHHHhhccccCCcEEEEECcccccCCcccc
Confidence 367999999999999865 2 5889999999998999998543335678899999999999999999999999999999
Q ss_pred cEEEEEEcCCCCCccchhhhhhcHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 031424 105 KIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 160 (160)
Q Consensus 105 klvfI~w~Pd~a~vk~KMlYsssk~~lk~~l~gi~~~i~a~d~~dl~~~~i~~kl~ 160 (160)
+++||||-|.+|+.-++|+||++|.-+.+.. ++++.+++++.+|++++++.++|.
T Consensus 87 PL~~Iyw~P~~~~~e~~MmYAgak~~~~~~~-~~~KvfEir~tdD~t~e~l~E~L~ 141 (143)
T KOG1736|consen 87 PLCFIYWSPVGCKPEQQMMYAGAKNMLVQTA-ELTKVFEIRSTDDLTEEWLREKLE 141 (143)
T ss_pred cEEEEEecCccCCHHHHHHHHHHHHHHHHHh-hheEEEEecccccccHHHHHHHhh
Confidence 9999999999999999999999999999887 688999999999999999999974
No 8
>KOG1747 consensus Protein tyrosine kinase 9/actin monomer-binding protein [Extracellular structures]
Probab=99.90 E-value=2.2e-23 Score=169.08 Aligned_cols=136 Identities=21% Similarity=0.381 Sum_probs=118.6
Q ss_pred hhhcCcCcc--cCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCceEEEEEeeeeeCC
Q 031424 22 LFQATTGMW--VADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVD 99 (160)
Q Consensus 22 ~~~~~SGi~--i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~pry~vy~~~~~~~~ 99 (160)
.+..++||. ++++..+|+++|+.++ .+||+|+||.+++.|.+..+.. ..+.++|...+|.+.|||.+|.|.+++.
T Consensus 168 kh~tl~Gva~pi~~~a~kAl~~L~~~~-~n~vql~ID~~nE~I~l~~t~~-~~e~sdL~s~vP~d~prY~ff~~~ht~e- 244 (342)
T KOG1747|consen 168 KHQTLQGVAFPIDRNAEKALQDLKSSK-LNYVQLSIDLENETIQLSQTDT-CTEPSDLPSRVPRDGPRYHFFLFKHTHE- 244 (342)
T ss_pred ceeeccceeecccHHHHHHHHHHHhhc-cceEEEEeccccceeeeeccCC-CCChHHhhhhcCCCCCceEEEecccccC-
Confidence 334467887 6899999999999987 9999999998888999887754 3679999999999999999999999874
Q ss_pred CCccccEEEEEEcCC-CCCccchhhhhhcHHHHHHhcC---C--eeEEEEeCCCCCCCHHHHHhhhC
Q 031424 100 NCRKSKIFFIAWAPT-ASRIRAKMLYATSKDGLRRVLD---G--IHYEVQATDPTEMGFDVIMDRAK 160 (160)
Q Consensus 100 ~~~~~klvfI~w~Pd-~a~vk~KMlYsssk~~lk~~l~---g--i~~~i~a~d~~dl~~~~i~~kl~ 160 (160)
|...+.++|||.||. +|+||+||+|||||..+...++ | +.++|+++|.+|||++.+.+.++
T Consensus 245 GD~~es~~FIYS~P~~~~sVKeRMlYSScK~~fLd~~k~~~gi~i~kKiEi~d~~eLte~~L~e~~H 311 (342)
T KOG1747|consen 245 GDPLESIVFIYSMPGYGCSVKERMLYSSCKSGFLDSLKNDLGIVISKKIEIDDGAELTEKFLYEELH 311 (342)
T ss_pred CCCceeEEEEEECCCCCcchhhhhHhhhcchhHHHHHHHhcCeeEEEEEeeCcHHHhhHHHHHHhhC
Confidence 556789999999999 9999999999999988877664 4 57899999999999999888764
No 9
>KOG1747 consensus Protein tyrosine kinase 9/actin monomer-binding protein [Extracellular structures]
Probab=99.89 E-value=1.3e-23 Score=170.27 Aligned_cols=127 Identities=24% Similarity=0.414 Sum_probs=108.2
Q ss_pred hcCcCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEcee----cCCCCChHHHhhcC-CCCCceEEEEEeeeeeC
Q 031424 24 QATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKV----GGAGEGYEDLAASL-PDDDCRYAVFDFDFVTV 98 (160)
Q Consensus 24 ~~~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~----g~~~~~~~el~~~L-~~~~pry~vy~~~~~~~ 98 (160)
++++||..++++...|++-+.++ .|.+...|+++ ++.+..+ ..+..+|++++..| .+.+|||++|+.+
T Consensus 2 S~QtGI~A~e~l~~~l~~~~~~k-~R~ikIvI~nE--ql~~~s~~e~~~~w~~D~~~~v~~ll~~~ePcyILyrld---- 74 (342)
T KOG1747|consen 2 SHQTGIRATEALKKFLNEAKNGK-LRLIKIVIENE--QLSPGSTSEPSTSWERDYDKLVLPLLDAREPCYILYRLD---- 74 (342)
T ss_pred CcccccchHHHHHHHHHhcccCc-eEEEEEEEecc--cccCCccccccccHHHHHHHHHHHhhccCCceEEEEeec----
Confidence 45899999999999999999997 99999999886 6765443 34566788888766 5689999999986
Q ss_pred CCCccccEEEEEEcCCCCCccchhhhhhcHHHHHHhcCC--eeEEEEeCCCCCCCHHHHHhhh
Q 031424 99 DNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG--IHYEVQATDPTEMGFDVIMDRA 159 (160)
Q Consensus 99 ~~~~~~klvfI~w~Pd~a~vk~KMlYsssk~~lk~~l~g--i~~~i~a~d~~dl~~~~i~~kl 159 (160)
++..+|+||.|+||+|+||+||+|||||++|++.+|| +..+..+++++||+...+.+-+
T Consensus 75 --s~~~~w~lIs~vPD~apVR~KMLYAsTrATlkrefG~~~i~ee~~~T~~~dl~~~~~~k~l 135 (342)
T KOG1747|consen 75 --SKNAEWLLISWVPDNAPVRQKMLYASTRATLKREFGGAYITEELFATDLEDLTLLGYFKSL 135 (342)
T ss_pred --CCCccEEEEEECCCCChHHHHHHHHHHHHHHHHHhccceeccccccCCHHHhhhHHHHHhh
Confidence 2334999999999999999999999999999999986 6779999999999998876543
No 10
>KOG3655 consensus Drebrins and related actin binding proteins [Cytoskeleton]
Probab=99.74 E-value=1.7e-17 Score=141.47 Aligned_cols=129 Identities=17% Similarity=0.258 Sum_probs=113.6
Q ss_pred cCcccCHHHHHHHHHhhccC-CeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCceEEEEEeeeeeCCCCcccc
Q 031424 27 TGMWVADECKNSFMEMKWKK-VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSK 105 (160)
Q Consensus 27 SGi~i~~e~~~a~~~lk~~~-~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~pry~vy~~~~~~~~~~~~~k 105 (160)
.+-.=..++.++|++++.+. .+.|++|++++.++.+.+..+| ..++++|.+.+......|+++++. +.++.+.|
T Consensus 5 ~~~~~~aei~aaY~~v~~d~~dt~WaiF~Yeg~s~~~~~~~s~--~~~~~e~~~df~~~kv~yg~~rv~---D~~s~l~K 79 (484)
T KOG3655|consen 5 NTTTHGAEIRAAYERVVDDSSDTDWALFTYEGNSNDLKVAGSG--EGGLEEFLGDFDSGKVMYGFCRVK---DPMSGLPK 79 (484)
T ss_pred cccccHHHHHHHHHHhhccCCCceeEEEeecCCccceeeeccc--cccHHHHhhhcccCceeEEEEEec---CcccCCcc
Confidence 34444678999999998765 6999999999976556555444 457999999999999999999985 56788999
Q ss_pred EEEEEEcCCCCCccchhhhhhcHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 031424 106 IFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 160 (160)
Q Consensus 106 lvfI~w~Pd~a~vk~KMlYsssk~~lk~~l~gi~~~i~a~d~~dl~~~~i~~kl~ 160 (160)
+|||+||++++++-+|..+|+.++.+++.|+|++++|+|++.+||+.+.|++||+
T Consensus 80 fvLI~W~GE~vp~~Rka~~ath~a~v~~~lkg~hV~i~Ar~e~Dld~d~i~~~ls 134 (484)
T KOG3655|consen 80 FVLINWIGEGVPVLRKAKCATHKALVKNFLKGFHVEINARSEEDLDEDAIREKLS 134 (484)
T ss_pred eEEEEecCCccHHHhhhhhcchHHHHHHHhhcceEEEeccchhhcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999984
No 11
>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes. This subfamily also includes proteins characterized as pyruvate NADP+ oxidoreductase (PNO). These enzymes are dependent on TPP and a divalent metal cation as cofactors. PFOR and PNO catalyze the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways. Archaea, anaerobic bacteria and eukaryotes that lack mitochondria (and therefore pyruvate dehydrogenase) use PFOR to oxidatively decarboxylate pyruvate, with ferredoxin or flavodoxin as the electron acceptor. The PFOR from cyanobacterium Anabaena (NifJ) is required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase. The facultative anaerobic mitochondrion of the photosynthetic protist Euglena gra
Probab=50.81 E-value=30 Score=29.73 Aligned_cols=73 Identities=12% Similarity=0.248 Sum_probs=46.1
Q ss_pred ccceeeehhhhhhhhhcCcCcccCHHHHHHHHHhhccCCeeEEEEEEeCC-----CceEEEceecCCCCChHHHhhcCCC
Q 031424 9 FGIKFMILFSGCFLFQATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEK-----SKLVTVDKVGGAGEGYEDLAASLPD 83 (160)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~-----~~~I~v~~~g~~~~~~~el~~~L~~ 83 (160)
-|-+|+.+|++|..+ |...+.+-.....++--.. .-|-+|.+++. .+.+.++..... .+++||++.
T Consensus 257 ~Gps~I~v~sPC~~~----G~~~~~~~~~~~~klAVet-G~wpLy~~~P~~~~~G~~~~~ld~~~~~-~pv~efL~~--- 327 (365)
T cd03377 257 DGPSLIIAYSPCIAH----GIKGGMTKSQEQQKLAVES-GYWPLYRYNPRLVEEGKNPLQLDSKEPD-GPVEEFLNN--- 327 (365)
T ss_pred CCCEEEEEEccCccc----CccCChhhHHHHHHHHHHc-CCCeEEEEeccccccCCCCeeecCCCCC-CCHHHHHHh---
Confidence 489999999999964 7655444444444444332 44999999842 133777766433 367777764
Q ss_pred CCceEEEE
Q 031424 84 DDCRYAVF 91 (160)
Q Consensus 84 ~~pry~vy 91 (160)
+-||.-+
T Consensus 328 -q~Rf~~L 334 (365)
T cd03377 328 -ENRFAAL 334 (365)
T ss_pred -chhHHHh
Confidence 5555444
No 12
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional
Probab=47.42 E-value=41 Score=28.09 Aligned_cols=43 Identities=12% Similarity=0.155 Sum_probs=29.7
Q ss_pred cceeeehhhhhhhhhcCcCcccCHHHHHHHHHhhccCCeeEEEEEEeCC
Q 031424 10 GIKFMILFSGCFLFQATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEK 58 (160)
Q Consensus 10 ~~~~~~~~~~~~~~~~~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~ 58 (160)
|-+|++++++|.+. ...+++-.....++-... ..|-+|.+++.
T Consensus 202 Gps~I~v~sPC~~~-----~~~~~~~~~~~~klAvet-g~~plye~~~g 244 (299)
T PRK11865 202 GPAYIQVLQPCPTG-----WGFPPEKTIEIGRLAVET-GYWPLFEIENG 244 (299)
T ss_pred CCEEEEEECCCCCC-----CCCCHHHHHHHHHHHHhc-CceeEEEEECC
Confidence 88999999999973 345555444444444333 56999999874
No 13
>PF08261 Carcinustatin: Carcinustatin peptide
Probab=41.04 E-value=10 Score=14.39 Aligned_cols=7 Identities=43% Similarity=1.179 Sum_probs=4.8
Q ss_pred ccccccc
Q 031424 5 LPFKFGI 11 (160)
Q Consensus 5 ~~~~~~~ 11 (160)
-||.||.
T Consensus 2 gpy~fgl 8 (8)
T PF08261_consen 2 GPYSFGL 8 (8)
T ss_pred CcccccC
Confidence 3888873
No 14
>cd01215 Dab Disabled (Dab) Phosphotyrosine-binding domain. Disabled (Dab) Phosphotyrosine-binding domain. Dab is a cystosolic adaptor protein, which binds to the cytoplasmic tails of lipoprotein receptors, such as ApoER2 and VLDLR, via its PTB domain. The dab PTB domain has a preference for unphosphorylated tyrosine within an NPxY motif. Additionally, the Dab PTB domain, which is structurally similar to PH domains, binds to phosphatidlyinositol phosphate 4,5 bisphosphate in a manner characteristic of phosphoinositide binding PH domains.
Probab=40.44 E-value=1.5e+02 Score=21.96 Aligned_cols=95 Identities=16% Similarity=0.264 Sum_probs=53.3
Q ss_pred cccccc---cceeeehhhhhhhhhcCcCcccCHHHHHHHHHhhc-----cCCeeEEEEEEeCCCceEEEceecCCCCChH
Q 031424 4 TLPFKF---GIKFMILFSGCFLFQATTGMWVADECKNSFMEMKW-----KKVHRYIVFKIDEKSKLVTVDKVGGAGEGYE 75 (160)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~~~~~~~SGi~i~~e~~~a~~~lk~-----~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~ 75 (160)
++|++| |+.|-+=|-+|.-.....|..+ |.+|.++++. ++..+-+.+.|+.++ |.+....+.
T Consensus 3 ~~~~~f~g~gv~f~aKylG~~eV~e~RG~~v---~~~Ai~klk~~~k~~~~kk~kV~L~IS~dG--i~v~D~~T~----- 72 (139)
T cd01215 3 SDPFRFQGNGVSYKAKLIGIQEVDKARGDAM---CAEAMRKAKSIIKGAGAHKTRITLQINIDG--IKVLDEKTG----- 72 (139)
T ss_pred CCcceeeCCcEEEEEEecccEecccCCchHH---HHHHHHHHHHHhhhhccccceEEEEEccCC--EEEEcCCCC-----
Confidence 466665 7888888878776666788777 5556655553 223455788888763 443222110
Q ss_pred HHhhcCCCCCceEEEEEeeeeeCCCCccccEEEEEEcCCC
Q 031424 76 DLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTA 115 (160)
Q Consensus 76 el~~~L~~~~pry~vy~~~~~~~~~~~~~klvfI~w~Pd~ 115 (160)
+++ ..+-+++..|-..|.+...-+-||+=-|++
T Consensus 73 ~ll-------~~~~i~rISfca~D~~d~r~FsyI~~~~~~ 105 (139)
T cd01215 73 AVL-------HHHPVHRISFIARDSTDARAFGYVYGEPGG 105 (139)
T ss_pred cEE-------EeeceeeEEEEecCCCCCeEEEEEEEcCCC
Confidence 111 123455566655554433445555555555
No 15
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional
Probab=30.90 E-value=1.2e+02 Score=25.33 Aligned_cols=70 Identities=13% Similarity=0.235 Sum_probs=44.1
Q ss_pred cceeeehhhhhhhhhcCcCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecC------CCCChHHHhhcCCC
Q 031424 10 GIKFMILFSGCFLFQATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGG------AGEGYEDLAASLPD 83 (160)
Q Consensus 10 ~~~~~~~~~~~~~~~~~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~------~~~~~~el~~~L~~ 83 (160)
|-+|++++++|.+ |...+++-.....++.-.. .-|.+|.+++- .+.+..... ...+.+|++..
T Consensus 198 Gps~I~~~spC~~-----~~~~~~~~~~~~~k~Av~t-g~wplye~~~g--~~~~~~~~~~~~~~~~~~pv~~~l~~--- 266 (300)
T PRK11864 198 GFKFIHLLAPCPP-----GWRFDPDKTIEIARLAVET-GVWPLFEYENG--KFKLNSPSKTLLDKKKRKPVEEYLKL--- 266 (300)
T ss_pred CCEEEEEeCCCCC-----CCCcChHHHHHHHHHHHHc-CCceEEEEECC--EEEEccCCccccccccCCCHHHHHhh---
Confidence 8899999999985 4555555555555555443 56999999973 466665311 12356666653
Q ss_pred CCceEEEE
Q 031424 84 DDCRYAVF 91 (160)
Q Consensus 84 ~~pry~vy 91 (160)
+.||.-+
T Consensus 267 -q~Rf~~L 273 (300)
T PRK11864 267 -QGRFKHL 273 (300)
T ss_pred -ccchhcC
Confidence 5555443
No 16
>PF11341 DUF3143: Protein of unknown function (DUF3143); InterPro: IPR021489 This family of proteins has no known function.
Probab=27.84 E-value=74 Score=20.39 Aligned_cols=29 Identities=10% Similarity=0.384 Sum_probs=25.3
Q ss_pred EEEEEcCCC-CCccchhhhhhcHHHHHHhc
Q 031424 107 FFIAWAPTA-SRIRAKMLYATSKDGLRRVL 135 (160)
Q Consensus 107 vfI~w~Pd~-a~vk~KMlYsssk~~lk~~l 135 (160)
+.|.|.+.+ ..+....-||-||+.|.+++
T Consensus 31 L~V~y~~~g~~~~~rsF~YsLSR~DvE~Ai 60 (63)
T PF11341_consen 31 LVVRYLQSGPQDIQRSFPYSLSREDVEAAI 60 (63)
T ss_pred EEEEEccCCCcccEEeccCcCCHHHHHHHH
Confidence 578899988 78888999999999998875
No 17
>PRK09798 antitoxin MazE; Provisional
Probab=27.26 E-value=1.9e+02 Score=19.20 Aligned_cols=54 Identities=4% Similarity=0.143 Sum_probs=35.2
Q ss_pred CcCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCC-CCChHHHhhcCCCCC
Q 031424 26 TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGA-GEGYEDLAASLPDDD 85 (160)
Q Consensus 26 ~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~-~~~~~el~~~L~~~~ 85 (160)
+.||.++..+.+++ .+..+. -+-+.+.++ .|++...... .-+++||++.+.++.
T Consensus 12 S~~vRIPk~~l~~l-~l~~g~---~vei~v~~~--~iiI~p~~~~~r~~l~eLla~~~~~~ 66 (82)
T PRK09798 12 SPAVRIPATLMQAL-NLNIDD---EVKIDLVDG--KLIIEPVRKEPVFTLAELVNDITPEN 66 (82)
T ss_pred cceEEcCHHHHHHc-CCCCCC---EEEEEEECC--EEEEEECCCCCCCCHHHHHhcCCCcC
Confidence 34788888887765 344333 456666653 6777765322 247999999987654
No 18
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=27.17 E-value=1.4e+02 Score=28.54 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=39.0
Q ss_pred CceEEEEEeeeeeCCCCccccEEEEEEcCCCCCccchhhhhhcHHHHHHhcC
Q 031424 85 DCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLD 136 (160)
Q Consensus 85 ~pry~vy~~~~~~~~~~~~~klvfI~w~Pd~a~vk~KMlYsssk~~lk~~l~ 136 (160)
.-||+|..-.+ |.+..-.|-..||+.+.|+.-.+|--|-+.-.+++.|+
T Consensus 527 aDcYiVLKT~~---ddsG~L~weIfyWiG~eAtLDK~aCsAiHAVnLRN~Lg 575 (1255)
T KOG0444|consen 527 ADCYIVLKTTR---DDSGQLRWEIFYWIGEEATLDKGACSAIHAVNLRNHLG 575 (1255)
T ss_pred ccEEEEEEeec---ccccccceeEEEEecccccccchhhhHHHhhhhhhhhC
Confidence 45799998753 33344578889999999999999988888888888885
No 19
>PF03400 DDE_Tnp_IS1: IS1 transposase; InterPro: IPR005063 Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated
Probab=24.60 E-value=1.5e+02 Score=21.56 Aligned_cols=45 Identities=24% Similarity=0.282 Sum_probs=32.9
Q ss_pred ccCCeeEEEEEEeCCCceEEEceecCC-CCChHHHhhcCCCCCceE
Q 031424 44 WKKVHRYIVFKIDEKSKLVTVDKVGGA-GEGYEDLAASLPDDDCRY 88 (160)
Q Consensus 44 ~~~~~~~iif~I~~~~~~I~v~~~g~~-~~~~~el~~~L~~~~pry 88 (160)
.+++..|+-+.++.+++.|+--..|+. ..++..|.+.|++-++.+
T Consensus 16 ~K~n~~Wiw~A~dr~t~~Iva~v~G~Rs~~T~~~L~~~L~~~~i~~ 61 (131)
T PF03400_consen 16 NKKNKRWIWYAIDRKTGGIVAFVFGDRSDKTFRKLWALLKPFNIGF 61 (131)
T ss_pred cCCCceEEEEEEeccCCcceeEEEecchhhHHHHHhhhhccccceE
Confidence 344689999999998888875555543 357889999997766544
No 20
>PRK11347 antitoxin ChpS; Provisional
Probab=24.31 E-value=2.2e+02 Score=18.93 Aligned_cols=54 Identities=7% Similarity=0.170 Sum_probs=35.8
Q ss_pred CcCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEceecCCCCChHHHhhcCCCCCc
Q 031424 26 TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDC 86 (160)
Q Consensus 26 ~SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~~~L~~~~p 86 (160)
+.|+.++.++.+.+ .+..+. -+-+.+.++ .|++..... .-+++||++.+.++.+
T Consensus 11 S~~vriPk~il~~l-~l~~G~---~v~i~v~~~--~iii~p~~~-~~tL~eLla~~~~~~~ 64 (83)
T PRK11347 11 SAGMVIPNIVMKEL-NLQPGQ---SVEAQVSNN--QLILTPISR-RYSLDELLAQCDMNAA 64 (83)
T ss_pred ceeEEeCHHHHHHc-CCCCCC---EEEEEEECC--EEEEEECCC-CCCHHHHHhcCCcccc
Confidence 45888998888776 445444 355555553 677766543 3579999999887553
No 21
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=24.18 E-value=65 Score=27.51 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=29.9
Q ss_pred cCcccCHHHHHHHHHhhccCCeeEEEEEEeCCCceEEEc
Q 031424 27 TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVD 65 (160)
Q Consensus 27 SGi~i~~e~~~a~~~lk~~~~~~~iif~I~~~~~~I~v~ 65 (160)
+|++|+|....||+.|-.++ .||++|--......|.+.
T Consensus 192 tsiHIDPlgTSAWNtll~Gh-KrW~LfPp~~p~~lvkv~ 229 (407)
T KOG2130|consen 192 TSIHIDPLGTSAWNTLLQGH-KRWVLFPPGTPPELVKVT 229 (407)
T ss_pred ceeEECCcchHHHHHHhhcc-ceeEEcCCCCCCCceeec
Confidence 46789999999999999987 899999766544455553
No 22
>KOG4392 consensus RNA polymerase, subunit L [Transcription]
Probab=21.87 E-value=1.1e+02 Score=21.89 Aligned_cols=63 Identities=14% Similarity=0.181 Sum_probs=36.9
Q ss_pred CeeEEEEEEeCCCceEEEceecCCCCChHHHh--hcCCCCCceEEEEEeeeeeCCCCccccEEEEEEcCCCCCccchhhh
Q 031424 47 VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLA--ASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLY 124 (160)
Q Consensus 47 ~~~~iif~I~~~~~~I~v~~~g~~~~~~~el~--~~L~~~~pry~vy~~~~~~~~~~~~~klvfI~w~Pd~a~vk~KMlY 124 (160)
..++++|.|+++..+ +--++ +.|.+..+-|+-|++++.- ..++++=--.-+.|++++--.-
T Consensus 27 vpNA~~fTiekEDHT------------LGNii~~qLl~D~~vLFagYkvpHPl-----~~~~~LRiqtt~d~~p~~al~~ 89 (117)
T KOG4392|consen 27 VPNAALFTIEKEDHT------------LGNIIKSQLLKDPRVLFAGYKVPHPL-----EHKIILRVQTTEDCSPADALTN 89 (117)
T ss_pred CCceEEEEEecccch------------HHHHHHHHHccCccceEeeecCCCcc-----cccEEEEEecCCCCCHHHHHHH
Confidence 355666666655322 32333 2457889999999998653 2455544444457777765444
Q ss_pred hh
Q 031424 125 AT 126 (160)
Q Consensus 125 ss 126 (160)
+.
T Consensus 90 a~ 91 (117)
T KOG4392|consen 90 AI 91 (117)
T ss_pred HH
Confidence 43
No 23
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain. PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.
Probab=21.08 E-value=2.9e+02 Score=19.04 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=27.6
Q ss_pred cceeeehhhhhhhhhcCcCcccCHHHHHHHHHhh--ccCCeeEEEEEEeCC
Q 031424 10 GIKFMILFSGCFLFQATTGMWVADECKNSFMEMK--WKKVHRYIVFKIDEK 58 (160)
Q Consensus 10 ~~~~~~~~~~~~~~~~~SGi~i~~e~~~a~~~lk--~~~~~~~iif~I~~~ 58 (160)
|+.|-+.|-++.-.....|..+-+++...+.... ..+..+-+.+.++..
T Consensus 3 ~~~f~v~YLGs~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~ 53 (134)
T smart00462 3 GVSFRVKYLGSVEVPEARGLQVVQEAIRKLRAAQGSEKKEPQKVILSISSR 53 (134)
T ss_pred ceEEEEEEEEEEEecCCCCcHHHHHHHHHHHHhhhhccCCCCEEEEEEECC
Confidence 5666666666554444456655555555554431 122456688888875
Done!