Your job contains 1 sequence.
>031425
MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI
SPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVA
MLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLANSGS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031425
(160 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2825741 - symbol:Lhca5 "photosystem I light ha... 584 9.6e-57 1
TAIR|locus:2079117 - symbol:LHCA4 "light-harvesting chlor... 270 1.8e-23 1
TAIR|locus:2200868 - symbol:LHCA3 "photosystem I light ha... 258 3.4e-22 1
TAIR|locus:2082767 - symbol:LHCA2 "photosystem I light ha... 251 1.9e-21 1
TAIR|locus:2202150 - symbol:Lhca6 "photosystem I light ha... 139 9.0e-21 2
TAIR|locus:2044988 - symbol:LHCB2.2 "photosystem II light... 147 5.5e-14 2
TAIR|locus:2042148 - symbol:LHCB2.1 "photosystem II light... 147 5.5e-14 2
UNIPROTKB|P12331 - symbol:CAB2R "Chlorophyll a-b binding ... 144 8.9e-14 2
UNIPROTKB|P12330 - symbol:CAB1R "Chlorophyll a-b binding ... 144 1.0e-13 2
TAIR|locus:2019287 - symbol:CAB3 "chlorophyll A/B binding... 144 1.1e-13 2
TAIR|locus:2019372 - symbol:CAB2 "chlorophyll A/B-binding... 144 1.1e-13 2
TAIR|locus:2019322 - symbol:CAB1 "chlorophyll A/B binding... 144 1.1e-13 2
TAIR|locus:2040934 - symbol:LHB1B2 "photosystem II light ... 142 1.7e-13 2
TAIR|locus:2040944 - symbol:LHB1B1 "light-harvesting chlo... 142 1.8e-13 2
TAIR|locus:2089139 - symbol:LHCB2.3 "photosystem II light... 145 3.3e-13 2
TAIR|locus:2149765 - symbol:LHCB4.1 "light harvesting com... 148 4.3e-13 2
TAIR|locus:2082717 - symbol:LHCA1 "photosystem I light ha... 147 1.0e-12 2
TAIR|locus:2162540 - symbol:LHCB3 "light-harvesting chlor... 142 3.9e-12 2
TAIR|locus:2097608 - symbol:LHCB4.2 "light harvesting com... 141 4.1e-12 2
TAIR|locus:2122794 - symbol:LHCB5 "light harvesting compl... 164 5.3e-12 1
TAIR|locus:2011691 - symbol:AT1G76570 species:3702 "Arabi... 152 2.1e-10 1
TAIR|locus:2146544 - symbol:AT5G28450 species:3702 "Arabi... 141 8.4e-10 1
TAIR|locus:2036209 - symbol:LHCB6 "light harvesting compl... 106 1.5e-05 1
>TAIR|locus:2825741 [details] [associations]
symbol:Lhca5 "photosystem I light harvesting complex gene
5" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009782 "photosystem I
antenna complex" evidence=IDA] [GO:0031409 "pigment binding"
evidence=IDA] [GO:0009768 "photosynthesis, light harvesting in
photosystem I" evidence=IGI] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA]
InterPro:IPR001344 Pfam:PF00504 EMBL:CP002684 EMBL:AC083835
GO:GO:0009535 GO:GO:0031409 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 GO:GO:0009768
UniGene:At.52042 EMBL:AY062097 EMBL:AY090263 EMBL:AK221694
IPI:IPI00542586 PIR:F96510 RefSeq:NP_175137.1 RefSeq:NP_849778.1
UniGene:At.20798 ProteinModelPortal:Q9C639 SMR:Q9C639 STRING:Q9C639
PRIDE:Q9C639 EnsemblPlants:AT1G45474.1 EnsemblPlants:AT1G45474.2
GeneID:841099 KEGG:ath:AT1G45474 TAIR:At1g45474 InParanoid:Q9C639
KO:K08911 OMA:VQASVTH PhylomeDB:Q9C639 ProtClustDB:PLN00147
Genevestigator:Q9C639 GO:GO:0009782 Uniprot:Q9C639
Length = 256
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 116/161 (72%), Positives = 128/161 (79%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M GVAGILFTDLLR TGIR LPVWYEAGAV+F FAST+TL +VQ LLMGFAETKRYMD++
Sbjct: 96 MLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFV 155
Query: 61 SPGSQTKEGSFF-GLEAAXXXXXXXXXXXXXXXXXXXAKDIRNAREWKLKEIKNGRLAMV 119
SPGSQ KEGSFF GLEAA AKD++NA +WKLKEIKNGRLAM+
Sbjct: 156 SPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMM 215
Query: 120 AMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLANSGS 160
AMLG FVQASVTH GPIDN++EHLS+PWHKTIIQTL S S
Sbjct: 216 AMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTLFTSTS 256
>TAIR|locus:2079117 [details] [associations]
symbol:LHCA4 "light-harvesting chlorophyll-protein
complex I subunit A4" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016168 "chlorophyll binding"
evidence=ISS;NAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
transport" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009941 GO:GO:0080167 GO:GO:0018298 GO:GO:0009535
GO:GO:0010287 EMBL:AL132955 EMBL:M63931 EMBL:AY093080 EMBL:BT000093
EMBL:AY086470 IPI:IPI00523187 PIR:T45707 RefSeq:NP_190331.3
UniGene:At.21346 UniGene:At.27524 UniGene:At.35504 UniGene:At.35803
UniGene:At.66361 UniGene:At.68076 UniGene:At.71101
ProteinModelPortal:P27521 SMR:P27521 STRING:P27521 PaxDb:P27521
PRIDE:P27521 EnsemblPlants:AT3G47470.1 GeneID:823901
KEGG:ath:AT3G47470 TAIR:At3g47470 eggNOG:NOG249845
HOGENOM:HOG000238033 InParanoid:P27521 KO:K08910 OMA:WFVQAEL
PhylomeDB:P27521 ProtClustDB:PLN00101 Genevestigator:P27521
GermOnline:AT3G47470 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
Uniprot:P27521
Length = 251
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 59/154 (38%), Positives = 86/154 (55%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M GVAG+L ++ GI +P WY+AG ++ FAS+ TLF+++ +L + E +R+ D
Sbjct: 104 MLGVAGMLLPEVFTKIGIINVPEWYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIK 162
Query: 61 SPGSQTKEGSFFGLEAAXXXXXXXXXXXXXXXXXXXAKDIRNAREWKLKEIKNGRLAMVA 120
+PGS ++ F + +E K KE+ NGRLAM+A
Sbjct: 163 NPGSVNQDPIF-------KQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLA 215
Query: 121 MLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQT 154
LG VQ +VT GP +N+L+HLSDPWH TI+QT
Sbjct: 216 FLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQT 249
>TAIR|locus:2200868 [details] [associations]
symbol:LHCA3 "photosystem I light harvesting complex gene
3" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR001344 Pfam:PF00504 EMBL:CP002684
GO:GO:0009535 GO:GO:0010287 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 PDB:2O01 PDBsum:2O01 UniGene:At.2877 EMBL:AC005850
UniGene:At.21403 EMBL:AY059879 EMBL:AY093370 IPI:IPI00532189
PIR:E96640 RefSeq:NP_001185280.1 RefSeq:NP_176347.1
UniGene:At.20472 UniGene:At.71924 UniGene:At.71944
ProteinModelPortal:Q9SY97 SMR:Q9SY97 STRING:Q9SY97 PRIDE:Q9SY97
ProMEX:Q9SY97 EnsemblPlants:AT1G61520.1 EnsemblPlants:AT1G61520.3
GeneID:842446 KEGG:ath:AT1G61520 TAIR:At1g61520 InParanoid:Q9SY97
KO:K08909 OMA:LMGFAEH PhylomeDB:Q9SY97 ProtClustDB:PLN00048
ArrayExpress:Q9SY97 Genevestigator:Q9SY97 Uniprot:Q9SY97
Length = 273
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 61/165 (36%), Positives = 92/165 (55%)
Query: 1 MAGVAGILFTDLLRVTGI----RELPVWYEAGAVE----FKF-ASTRTLFIVQLLLMGFA 51
M G AG + ++L G+ LP W++ G + + + A TLF++++ LMGFA
Sbjct: 108 MLGAAGAIAPEILGKAGLIPAETALP-WFQTGVIPPAGTYTYWADNYTLFVLEMALMGFA 166
Query: 52 ETKRYMDYISPGSQTKEGSFFGLEAAXXXXXXXXXXXXXXXX-XXXAKDIRNAREWKLKE 110
E +R D+ +PGS K+ F GLE KD ++ +E KLKE
Sbjct: 167 EHRRLQDWYNPGSMGKQ-YFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKE 225
Query: 111 IKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTL 155
+KNGRLAM+A+LG F+Q VT VGP N+L+HL+DP + ++ +L
Sbjct: 226 VKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 270
>TAIR|locus:2082767 [details] [associations]
symbol:LHCA2 "photosystem I light harvesting complex gene
2" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0009768 "photosynthesis, light harvesting in
photosystem I" evidence=TAS] [GO:0009782 "photosystem I antenna
complex" evidence=TAS] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] InterPro:IPR001344
Pfam:PF00504 EMBL:CP002686 GO:GO:0009535 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
TCDB:5.B.4.1.1 UniGene:At.46743 UniGene:At.55066 KO:K08908
EMBL:AF134120 EMBL:AY054670 EMBL:AY065429 EMBL:AY072483
EMBL:BT002070 IPI:IPI00543126 PIR:T50550 RefSeq:NP_191706.2
ProteinModelPortal:Q9SYW8 SMR:Q9SYW8 STRING:Q9SYW8 PRIDE:Q9SYW8
EnsemblPlants:AT3G61470.1 GeneID:825320 KEGG:ath:AT3G61470
TAIR:At3g61470 InParanoid:Q9SYW8 OMA:SWYTAGE PhylomeDB:Q9SYW8
ProtClustDB:CLSN2696878 ArrayExpress:Q9SYW8 Genevestigator:Q9SYW8
Uniprot:Q9SYW8
Length = 257
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 58/151 (38%), Positives = 78/151 (51%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M G AGI + L GI P WY AG E+ F TLF+V+L+L+G+AE +R+ D I
Sbjct: 102 MLGAAGIFIPEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADII 160
Query: 61 SPGSQTKEGSFFGLEAAXXXXXXXXXXXXXXXXXXXAKDIRNAREWKLKEIKNGRLAMVA 120
PGS + F + + +E + KEIKNGRLAM+A
Sbjct: 161 KPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAK-LKELRTKEIKNGRLAMLA 219
Query: 121 MLGIFVQASVTHVGPIDNILEHLSDPWHKTI 151
++G + Q T GPIDN+ HL+DP H TI
Sbjct: 220 VMGAWFQHIYTGTGPIDNLFAHLADPGHATI 250
>TAIR|locus:2202150 [details] [associations]
symbol:Lhca6 "photosystem I light harvesting complex gene
6" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002684 GO:GO:0009507 GO:GO:0016020 GO:GO:0009637
GO:GO:0010218 GO:GO:0010114 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 KO:K08908 EMBL:AY086461 EMBL:BT020322
EMBL:BT020554 IPI:IPI00532569 RefSeq:NP_173349.1 UniGene:At.359
ProteinModelPortal:Q8LCQ4 SMR:Q8LCQ4 STRING:Q8LCQ4 PRIDE:Q8LCQ4
DNASU:838498 EnsemblPlants:AT1G19150.1 GeneID:838498
KEGG:ath:AT1G19150 TAIR:At1g19150 InParanoid:Q8LCQ4 OMA:WFAQAEL
PhylomeDB:Q8LCQ4 ProtClustDB:PLN00098 Genevestigator:Q8LCQ4
Uniprot:Q8LCQ4
Length = 270
Score = 139 (54.0 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M V GI+ + L G E WY+AG+ E+ FA + TLF+ Q++LMG+AE +R+ D I
Sbjct: 115 MLAVTGIIIPECLERLGFIENFSWYDAGSREY-FADSTTLFVAQMVLMGWAEGRRWADLI 173
Query: 61 SPGS 64
PGS
Sbjct: 174 KPGS 177
Score = 127 (49.8 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 107 KLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLAN 157
+ KEIKNGRLAM+A LG QA+ T PI+N++ HL+DP H + +
Sbjct: 219 RTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTS 269
>TAIR|locus:2044988 [details] [associations]
symbol:LHCB2.2 "photosystem II light harvesting complex
gene 2.2" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0030076 "light-harvesting
complex" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR001344
Pfam:PF00504 GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009941 GO:GO:0009535 GO:GO:0010287 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 HOGENOM:HOG000238032
ProtClustDB:PLN00025 EMBL:AC007211 EMBL:AF134123 EMBL:AY054218
EMBL:AY062563 EMBL:AY066036 EMBL:AY093372 IPI:IPI00542481
PIR:T52324 RefSeq:NP_178582.1 UniGene:At.48420 UniGene:At.63397
UniGene:At.72525 ProteinModelPortal:Q9S7J7 SMR:Q9S7J7 IntAct:Q9S7J7
STRING:Q9S7J7 PaxDb:Q9S7J7 PRIDE:Q9S7J7 ProMEX:Q9S7J7
EnsemblPlants:AT2G05070.1 GeneID:815055 KEGG:ath:AT2G05070
TAIR:At2g05070 eggNOG:NOG312402 InParanoid:Q9S7J7 KO:K08913
OMA:AFATKYT PhylomeDB:Q9S7J7 ArrayExpress:Q9S7J7
Genevestigator:Q9S7J7 Uniprot:Q9S7J7
Length = 265
Score = 147 (56.8 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A+D E K+KE+KNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 200 AEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADP 249
Score = 52 (23.4 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQL 45
M G G F ++L G++ VW++AG+ F S ++ VQ+
Sbjct: 106 MLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQV 165
Query: 46 LLMGFAETKR 55
+LMGF E R
Sbjct: 166 VLMGFIEGYR 175
>TAIR|locus:2042148 [details] [associations]
symbol:LHCB2.1 "photosystem II light harvesting complex
gene 2.1" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0030076 "light-harvesting
complex" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0010218 "response to far red light" evidence=IEP] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009941 GO:GO:0009637
GO:GO:0010218 GO:GO:0010114 GO:GO:0009535 GO:GO:0010287
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
HOGENOM:HOG000238032 ProtClustDB:PLN00025 UniGene:At.48420
UniGene:At.63397 KO:K08913 EMBL:AC007443 EMBL:AY052275
EMBL:AY052348 EMBL:BT001933 IPI:IPI00535929 RefSeq:NP_178585.1
ProteinModelPortal:Q9SHR7 SMR:Q9SHR7 STRING:Q9SHR7 PRIDE:Q9SHR7
EnsemblPlants:AT2G05100.1 GeneID:815058 KEGG:ath:AT2G05100
TAIR:At2g05100 InParanoid:Q9SHR7 OMA:MAASAIQ PhylomeDB:Q9SHR7
ArrayExpress:Q9SHR7 Genevestigator:Q9SHR7 Uniprot:Q9SHR7
Length = 265
Score = 147 (56.8 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A+D E K+KE+KNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 200 AEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADP 249
Score = 52 (23.4 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQL 45
M G G F ++L G++ VW++AG+ F S ++ VQ+
Sbjct: 106 MLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQV 165
Query: 46 LLMGFAETKR 55
+LMGF E R
Sbjct: 166 VLMGFIEGYR 175
>UNIPROTKB|P12331 [details] [associations]
symbol:CAB2R "Chlorophyll a-b binding protein 2,
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0009535 "chloroplast thylakoid membrane" evidence=ISS]
[GO:0015979 "photosynthesis" evidence=ISS] InterPro:IPR001344
Pfam:PF00504 GO:GO:0016021 GO:GO:0005739 GO:GO:0046872
GO:GO:0048046 GO:GO:0009941 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 GO:GO:0010287
GO:GO:0015979 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 KO:K08912
OMA:SSGIEFY ProtClustDB:PLN00025 eggNOG:NOG322441 EMBL:X13909
EMBL:AP003278 EMBL:AK121563 PIR:S03706 RefSeq:NP_001043493.1
UniGene:Os.79136 ProteinModelPortal:P12331 SMR:P12331 STRING:P12331
EnsemblPlants:LOC_Os01g41710.1 GeneID:4324599
KEGG:dosa:Os01t0600900-02 KEGG:dosa:Os03t0165375-00
KEGG:dosa:Os06t0484450-00 KEGG:osa:4324599 Gramene:P12331
Uniprot:P12331
Length = 261
Score = 144 (55.7 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A D E K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 196 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 245
Score = 53 (23.7 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF 32
M G G +F +LL G++ VW++AG+ F
Sbjct: 102 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 134
>UNIPROTKB|P12330 [details] [associations]
symbol:CAB1R "Chlorophyll a-b binding protein 1,
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0009535 "chloroplast thylakoid membrane" evidence=ISS]
[GO:0015979 "photosynthesis" evidence=ISS] InterPro:IPR001344
Pfam:PF00504 GO:GO:0016021 GO:GO:0005739 GO:GO:0046872
GO:GO:0048046 GO:GO:0009941 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 GO:GO:0010287
GO:GO:0015979 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
HOGENOM:HOG000238032 KO:K08912 ProtClustDB:PLN00025 EMBL:X13908
EMBL:D00641 EMBL:AP005313 EMBL:AP005700 EMBL:AK060851 PIR:A44956
PIR:S03705 RefSeq:NP_001062939.1 UniGene:Os.7941
ProteinModelPortal:P12330 SMR:P12330 STRING:P12330
EnsemblPlants:LOC_Os09g17740.1 GeneID:4346803
KEGG:dosa:Os09t0346500-04 KEGG:osa:4346803 Gramene:P12330
eggNOG:NOG322441 OMA:GEARITM Uniprot:P12330
Length = 265
Score = 144 (55.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A D E K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 200 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 249
Score = 53 (23.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF 32
M G G +F +LL G++ VW++AG+ F
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 138
>TAIR|locus:2019287 [details] [associations]
symbol:CAB3 "chlorophyll A/B binding protein 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016168 "chlorophyll
binding" evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002684 GO:GO:0005739 GO:GO:0046872
GO:GO:0018298 GO:GO:0009535 UniGene:At.49175 GO:GO:0010287
EMBL:AC008030 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
IPI:IPI00527705 RefSeq:NP_564339.1 RefSeq:NP_564340.1
UniGene:At.10812 UniGene:At.24351 UniGene:At.27031 UniGene:At.32199
UniGene:At.43708 UniGene:At.66422 UniGene:At.70617 UniGene:At.71449
UniGene:At.71528 UniGene:At.71547 DNASU:839869 DNASU:839870
EnsemblPlants:AT1G29910.1 EnsemblPlants:AT1G29920.1 GeneID:839869
GeneID:839870 KEGG:ath:AT1G29910 KEGG:ath:AT1G29920 KO:K08912
EMBL:X03908 EMBL:AY065165 EMBL:AY114594 ProteinModelPortal:Q8VZ87
SMR:Q8VZ87 IntAct:Q8VZ87 STRING:Q8VZ87 PaxDb:Q8VZ87 PRIDE:Q8VZ87
TAIR:At1g29910 eggNOG:NOG327854 PhylomeDB:Q8VZ87
Genevestigator:Q8VZ87 GermOnline:AT1G29910 Uniprot:Q8VZ87
Length = 267
Score = 144 (55.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A D E K+KE+KNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 202 ATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 251
Score = 53 (23.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF 32
M G G +F +LL G++ VW++AG+ F
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 139
>TAIR|locus:2019372 [details] [associations]
symbol:CAB2 "chlorophyll A/B-binding protein 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016168 "chlorophyll
binding" evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0010218 "response to far red light" evidence=IEP] [GO:0009750
"response to fructose stimulus" evidence=IEP] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0048046 GO:GO:0009750 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 UniGene:At.49175
EMBL:AC008030 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 EMBL:X03907
EMBL:AY052237 EMBL:AY054198 EMBL:AY060500 EMBL:AY062814
EMBL:AY081572 EMBL:AY128345 EMBL:BT000726 EMBL:AY086905
IPI:IPI00527705 PIR:A29280 RefSeq:NP_564339.1 RefSeq:NP_564340.1
UniGene:At.10812 UniGene:At.24351 UniGene:At.27031 UniGene:At.32199
UniGene:At.43708 UniGene:At.66422 UniGene:At.70617 UniGene:At.71449
UniGene:At.71528 UniGene:At.71547 ProteinModelPortal:P0CJ48
SMR:P0CJ48 IntAct:P0CJ48 PRIDE:P0CJ48 DNASU:839869 DNASU:839870
EnsemblPlants:AT1G29910.1 EnsemblPlants:AT1G29920.1 GeneID:839869
GeneID:839870 KEGG:ath:AT1G29910 KEGG:ath:AT1G29920 TAIR:At1g29920
HOGENOM:HOG000238032 KO:K08912 PhylomeDB:P0CJ48 Uniprot:P0CJ48
Length = 267
Score = 144 (55.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A D E K+KE+KNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 202 ATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 251
Score = 53 (23.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF 32
M G G +F +LL G++ VW++AG+ F
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 139
>TAIR|locus:2019322 [details] [associations]
symbol:CAB1 "chlorophyll A/B binding protein 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016168
"chlorophyll binding" evidence=ISS;TAS] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0015979
"photosynthesis" evidence=ISS] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
UniGene:At.23809 GO:GO:0018298 GO:GO:0009535 UniGene:At.49175
EMBL:AC008030 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
UniGene:At.10812 UniGene:At.24351 UniGene:At.32199 UniGene:At.43708
UniGene:At.66422 UniGene:At.71449 UniGene:At.71528
HOGENOM:HOG000238032 KO:K08912 eggNOG:NOG327854
GermOnline:AT1G29910 EMBL:X03909 EMBL:AF428359 EMBL:AY045673
EMBL:AY050935 EMBL:AY058180 EMBL:AY091169 EMBL:X15221 EMBL:X15222
EMBL:Z17799 IPI:IPI00547631 PIR:A86423 RefSeq:NP_174286.1
UniGene:At.19140 UniGene:At.48174 UniGene:At.71551
ProteinModelPortal:P04778 SMR:P04778 IntAct:P04778 STRING:P04778
PaxDb:P04778 PRIDE:P04778 ProMEX:P04778 EnsemblPlants:AT1G29930.1
GeneID:839871 KEGG:ath:AT1G29930 TAIR:At1g29930 InParanoid:P04778
OMA:SSGIEFY PhylomeDB:P04778 ProtClustDB:PLN00025
Genevestigator:P04778 Uniprot:P04778
Length = 267
Score = 144 (55.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A D E K+KE+KNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 202 ATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 251
Score = 53 (23.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF 32
M G G +F +LL G++ VW++AG+ F
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 139
>TAIR|locus:2040934 [details] [associations]
symbol:LHB1B2 "photosystem II light harvesting complex
gene B1B2" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0009769 "photosynthesis, light
harvesting in photosystem II" evidence=TAS] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016168 "chlorophyll binding"
evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0042651 "thylakoid membrane" evidence=TAS]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0015979 "photosynthesis" evidence=ISS] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 UniGene:At.10812 UniGene:At.24351 UniGene:At.32199
UniGene:At.66422 UniGene:At.71449 UniGene:At.71528
HOGENOM:HOG000238032 KO:K08912 ProtClustDB:PLN00025
UniGene:At.23647 UniGene:At.27457 UniGene:At.24064 UniGene:At.24888
EMBL:AF372886 EMBL:AY039561 EMBL:AY045806 EMBL:AF428397
EMBL:AF419548 EMBL:AF419587 EMBL:AY065125 EMBL:AY079101
EMBL:AY079110 EMBL:AY081587 EMBL:AY142513 EMBL:AK229627 EMBL:X64460
IPI:IPI00530785 PIR:S23546 RefSeq:NP_565786.1 UniGene:At.71003
UniGene:At.71384 ProteinModelPortal:Q39141 SMR:Q39141 IntAct:Q39141
STRING:Q39141 PRIDE:Q39141 EnsemblPlants:AT2G34420.1 GeneID:818005
KEGG:ath:AT2G34420 TAIR:At2g34420 InParanoid:Q39141
PhylomeDB:Q39141 ArrayExpress:Q39141 Genevestigator:Q39141
Uniprot:Q39141
Length = 265
Score = 142 (55.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A D E K+KE+KNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 200 ATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 249
Score = 53 (23.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF 32
M G G +F +LL G++ VW++AG+ F
Sbjct: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 137
>TAIR|locus:2040944 [details] [associations]
symbol:LHB1B1 "light-harvesting chlorophyll-protein
complex II subunit B1" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0009769
"photosynthesis, light harvesting in photosystem II" evidence=TAS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0042651 "thylakoid membrane" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0010287 "plastoglobule"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR001344 Pfam:PF00504 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 UniGene:At.10812 UniGene:At.24351 UniGene:At.66422
UniGene:At.71449 UniGene:At.71528 HOGENOM:HOG000238032 KO:K08912
ProtClustDB:PLN00025 UniGene:At.22980 UniGene:At.71384
EMBL:AF326864 EMBL:AF339687 EMBL:AY120776 EMBL:BT002103 EMBL:X64459
IPI:IPI00535697 PIR:S25677 RefSeq:NP_565787.1 UniGene:At.67299
UniGene:At.71696 ProteinModelPortal:Q39142 SMR:Q39142 STRING:Q39142
PRIDE:Q39142 EnsemblPlants:AT2G34430.1 GeneID:818006
KEGG:ath:AT2G34430 TAIR:At2g34430 InParanoid:Q39142 OMA:RITMRKA
PhylomeDB:Q39142 ArrayExpress:Q39142 Genevestigator:Q39142
Uniprot:Q39142
Length = 266
Score = 142 (55.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A D E K+KE+KNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 201 ATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250
Score = 53 (23.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF 32
M G G +F +LL G++ VW++AG+ F
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 138
>TAIR|locus:2089139 [details] [associations]
symbol:LHCB2.3 "photosystem II light harvesting complex
gene 2.3" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0030076 "light-harvesting
complex" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009637
"response to blue light" evidence=IEP;RCA] [GO:0010114 "response to
red light" evidence=IEP;RCA] [GO:0010218 "response to far red
light" evidence=IEP;RCA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR001344 Pfam:PF00504 EMBL:CP002686 GO:GO:0009941
GO:GO:0009637 GO:GO:0010218 GO:GO:0010114 GO:GO:0009535
EMBL:AB018114 GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
HOGENOM:HOG000238032 ProtClustDB:PLN00025 UniGene:At.63397
KO:K08913 EMBL:AF134125 EMBL:AF370557 EMBL:BT006298 IPI:IPI00549108
PIR:T52322 RefSeq:NP_189406.1 UniGene:At.71997 UniGene:At.8025
ProteinModelPortal:Q9XF87 SMR:Q9XF87 STRING:Q9XF87 PRIDE:Q9XF87
EnsemblPlants:AT3G27690.1 GeneID:822391 KEGG:ath:AT3G27690
TAIR:At3g27690 InParanoid:Q9XF87 OMA:QHSSFAG PhylomeDB:Q9XF87
Genevestigator:Q9XF87 Uniprot:Q9XF87
Length = 266
Score = 145 (56.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
A+D E K+KE+KNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 201 AEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADP 250
Score = 47 (21.6 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFKFA--------------STRTLFIVQL 45
M G G F ++L G++ VW++AG+ F S ++ Q+
Sbjct: 107 MLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQV 166
Query: 46 LLMGFAETKR 55
+LMGF E R
Sbjct: 167 VLMGFIEGYR 176
>TAIR|locus:2149765 [details] [associations]
symbol:LHCB4.1 "light harvesting complex photosystem II"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0009637 GO:GO:0010218 GO:GO:0010114 GO:GO:0018298
GO:GO:0009535 GO:GO:0010287 HOGENOM:HOG000238033 GO:GO:0009522
GO:GO:0009523 GO:GO:0016168 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 eggNOG:NOG319330 KO:K08915 EMBL:X71878
EMBL:AL161946 EMBL:AF370474 EMBL:AY048262 EMBL:AY048300
EMBL:AY057641 EMBL:AY059861 EMBL:AY081680 EMBL:AY092980
EMBL:AY133566 EMBL:BT000363 IPI:IPI00542715 PIR:S33443
RefSeq:NP_195773.1 UniGene:At.23015 UniGene:At.23659
UniGene:At.23691 UniGene:At.24017 UniGene:At.75201
ProteinModelPortal:Q07473 SMR:Q07473 IntAct:Q07473 STRING:Q07473
PaxDb:Q07473 PRIDE:Q07473 EnsemblPlants:AT5G01530.1 GeneID:830325
KEGG:ath:AT5G01530 TAIR:At5g01530 InParanoid:Q07473 OMA:PLHTTIF
PhylomeDB:Q07473 ProtClustDB:PLN00187 Genevestigator:Q07473
GermOnline:AT5G01530 Uniprot:Q07473
Length = 290
Score = 148 (57.2 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 156
A D + +L EIK+ RLAMVA LG VQA+ T GP++N HLSDP H TII T +
Sbjct: 229 AADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFS 288
Query: 157 NS 158
+S
Sbjct: 289 SS 290
Score = 45 (20.9 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 22/82 (26%), Positives = 34/82 (41%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFAST----------RTLFIVQLLLMGF 50
M G L + L TG+ W +AG VE S+ TL +++L++G+
Sbjct: 148 MLATLGALSVEWL--TGV----TWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGY 201
Query: 51 AETKRYMDYISPGSQTKEGSFF 72
E +R + S G FF
Sbjct: 202 IEFQRNAELDSEKRLYPGGKFF 223
>TAIR|locus:2082717 [details] [associations]
symbol:LHCA1 "photosystem I light harvesting complex gene
1" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009768 "photosynthesis, light harvesting in photosystem I"
evidence=IMP] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655
GO:GO:0046872 GO:GO:0009941 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 GO:GO:0010287
HOGENOM:HOG000238033 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 EMBL:M85150 EMBL:X56062
EMBL:AF324692 EMBL:AF325016 EMBL:AF326866 EMBL:AF339688
EMBL:AF361847 EMBL:AY070473 EMBL:AY094437 EMBL:BT000852
EMBL:AK317555 IPI:IPI00516813 PIR:S25435 RefSeq:NP_191049.1
UniGene:At.23982 UniGene:At.67867 PDB:2O01 PDB:2WSC PDB:2WSE
PDB:2WSF PDBsum:2O01 PDBsum:2WSC PDBsum:2WSE PDBsum:2WSF
ProteinModelPortal:Q01667 SMR:Q01667 DIP:DIP-59003N STRING:Q01667
PaxDb:Q01667 PRIDE:Q01667 ProMEX:Q01667 EnsemblPlants:AT3G54890.1
GeneID:824654 KEGG:ath:AT3G54890 TAIR:At3g54890 eggNOG:NOG263751
InParanoid:Q01667 KO:K08907 OMA:LAIEFLA PhylomeDB:Q01667
ProtClustDB:PLN00099 EvolutionaryTrace:Q01667 Genevestigator:Q01667
GO:GO:0009768 Uniprot:Q01667
Length = 241
Score = 147 (56.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASV-THVGPIDNILEHLSDPWHKTI 151
+KD + E K+KEIKNGRLA++A +G VQ S GP++N+ HL+DPWH I
Sbjct: 178 SKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
Score = 36 (17.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 39 TLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFF 72
T+ ++ L + F E +R M+ P + G F
Sbjct: 140 TILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAF 172
>TAIR|locus:2162540 [details] [associations]
symbol:LHCB3 "light-harvesting chlorophyll B-binding
protein 3" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS;IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0005198 "structural
molecule activity" evidence=IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR001344 Pfam:PF00504 EMBL:CP002688 GO:GO:0005198
EMBL:AB010695 GO:GO:0009535 UniGene:At.49175 GO:GO:0015979
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
UniGene:At.10812 UniGene:At.32199 UniGene:At.66422
HOGENOM:HOG000238032 ProtClustDB:PLN00025 UniGene:At.70236
UniGene:At.21173 EMBL:AF134126 EMBL:AF143691 EMBL:AF361858
EMBL:AF372917 EMBL:AY057735 IPI:IPI00532626 PIR:T52318
RefSeq:NP_200238.1 ProteinModelPortal:Q9S7M0 SMR:Q9S7M0
STRING:Q9S7M0 PRIDE:Q9S7M0 EnsemblPlants:AT5G54270.1 GeneID:835515
KEGG:ath:AT5G54270 TAIR:At5g54270 InParanoid:Q9S7M0 KO:K08914
OMA:ADDPVTF PhylomeDB:Q9S7M0 Genevestigator:Q9S7M0 Uniprot:Q9S7M0
Length = 265
Score = 142 (55.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 105 EWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
E K+KEIKNGRLAM +M G FVQA VT GP++N+L+HL +P
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNP 249
Score = 40 (19.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1 MAGVAGILFTDLLRV---TGIRELPVWYEAGAVEF 32
M G G + ++L+ +E PVW++AG+ F
Sbjct: 104 MLGAFGCITPEVLQKWVRVDFKE-PVWFKAGSQIF 137
>TAIR|locus:2097608 [details] [associations]
symbol:LHCB4.2 "light harvesting complex photosystem II"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009637 "response to blue light" evidence=IEP;RCA] [GO:0010114
"response to red light" evidence=IEP;RCA] [GO:0010218 "response to
far red light" evidence=IEP;RCA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR001344 Pfam:PF00504 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0009941 GO:GO:0009637
GO:GO:0010218 GO:GO:0010114 GO:GO:0018298 EMBL:AC010871
GO:GO:0009535 HOGENOM:HOG000238033 GO:GO:0009522 GO:GO:0009523
GO:GO:0016168 GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 KO:K08915
ProtClustDB:PLN00187 EMBL:AF134127 EMBL:AY065140 EMBL:AY081608
IPI:IPI00521901 IPI:IPI00542269 PIR:T52317 RefSeq:NP_187506.1
RefSeq:NP_850545.1 UniGene:At.21828 UniGene:At.22485
UniGene:At.6984 ProteinModelPortal:Q9XF88 SMR:Q9XF88 STRING:Q9XF88
PaxDb:Q9XF88 PRIDE:Q9XF88 ProMEX:Q9XF88 EnsemblPlants:AT3G08940.2
GeneID:820043 KEGG:ath:AT3G08940 TAIR:At3g08940 eggNOG:NOG330021
InParanoid:Q9XF88 OMA:TRFTAWF PhylomeDB:Q9XF88
Genevestigator:Q9XF88 GermOnline:AT3G08940 Uniprot:Q9XF88
Length = 287
Score = 141 (54.7 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 156
A D + +L EIK+ RLAMV LG VQA+ T GP++N HLSDP H TII T +
Sbjct: 226 ASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFS 285
Query: 157 NS 158
+S
Sbjct: 286 SS 287
Score = 43 (20.2 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 36 STRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFF 72
S TL +++L++G+ E +R + S G FF
Sbjct: 184 SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFF 220
>TAIR|locus:2122794 [details] [associations]
symbol:LHCB5 "light harvesting complex of photosystem II
5" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009533 "chloroplast stromal thylakoid"
evidence=IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS;IMP]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009783 "photosystem II antenna complex"
evidence=IMP] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0010196
"nonphotochemical quenching" evidence=IMP] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0009517 "PSII associated
light-harvesting complex II" evidence=IDA] InterPro:IPR001344
Pfam:PF00504 GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009637 GO:GO:0010218 GO:GO:0010114
GO:GO:0018298 GO:GO:0010287 GO:GO:0015979 EMBL:AL049488
EMBL:AL161517 GO:GO:0009522 GO:GO:0016168 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 HOGENOM:HOG000238032
EMBL:AF134129 EMBL:AF326900 EMBL:AF339718 EMBL:AF424597
EMBL:AF380631 EMBL:AY054126 EMBL:AY087939 IPI:IPI00535216
PIR:T04049 RefSeq:NP_192772.1 UniGene:At.23060
ProteinModelPortal:Q9XF89 SMR:Q9XF89 DIP:DIP-59004N STRING:Q9XF89
PaxDb:Q9XF89 PRIDE:Q9XF89 EnsemblPlants:AT4G10340.1 GeneID:826626
KEGG:ath:AT4G10340 TAIR:At4g10340 eggNOG:NOG321165
InParanoid:Q9XF89 KO:K08916 OMA:EGPVENL PhylomeDB:Q9XF89
ProtClustDB:CLSN2685679 Genevestigator:Q9XF89 GermOnline:AT4G10340
GO:GO:0009783 GO:GO:0009517 GO:GO:0010196 Uniprot:Q9XF89
Length = 280
Score = 164 (62.8 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 97 AKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 156
AKD K+KEIKNGRLAM AMLG F+QA VT GP++N+ +HLSDP+ ++ +A
Sbjct: 212 AKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIA 271
Query: 157 NS 158
+
Sbjct: 272 GT 273
>TAIR|locus:2011691 [details] [associations]
symbol:AT1G76570 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0016020 "membrane" evidence=IEA]
[GO:0016168 "chlorophyll binding" evidence=ISS] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0009637 "response to
blue light" evidence=IEP] [GO:0010218 "response to far red light"
evidence=IEP] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016020
GO:GO:0009637 GO:GO:0010218 EMBL:AC015450 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 HOGENOM:HOG000238032
IPI:IPI00528080 PIR:G96793 RefSeq:NP_177783.1 UniGene:At.34640
ProteinModelPortal:Q9C9K1 SMR:Q9C9K1 PaxDb:Q9C9K1 PRIDE:Q9C9K1
EnsemblPlants:AT1G76570.1 GeneID:843990 KEGG:ath:AT1G76570
TAIR:At1g76570 eggNOG:NOG237807 InParanoid:Q9C9K1 KO:K14172
OMA:DYGFDIA PhylomeDB:Q9C9K1 ProtClustDB:PLN00171
Genevestigator:Q9C9K1 Uniprot:Q9C9K1
Length = 327
Score = 152 (58.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 107 KLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTL 155
K+KEIKNGRLAMVA LG + QA+ T GP+ N+++H+SDP H +I L
Sbjct: 277 KVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAML 325
>TAIR|locus:2146544 [details] [associations]
symbol:AT5G28450 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0016020 "membrane" evidence=IEA]
[GO:0016168 "chlorophyll binding" evidence=ISS] [GO:0030076
"light-harvesting complex" evidence=ISS] InterPro:IPR001344
Pfam:PF00504 EMBL:CP002688 GO:GO:0009507 GO:GO:0016020
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
IPI:IPI00523588 RefSeq:NP_198197.1 UniGene:At.46743
UniGene:At.55066 ProteinModelPortal:F4K8I1 SMR:F4K8I1 DNASU:832932
EnsemblPlants:AT5G28450.1 GeneID:832932 KEGG:ath:AT5G28450
KO:K08908 PhylomeDB:F4K8I1 Uniprot:F4K8I1
Length = 173
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 104 REWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTI 151
+E + KEIKNGRLAM+A++G + Q T GPIDN+ HL+DP H TI
Sbjct: 119 KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 166
>TAIR|locus:2036209 [details] [associations]
symbol:LHCB6 "light harvesting complex photosystem II
subunit 6" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016168 "chlorophyll binding" evidence=ISS] [GO:0015979
"photosynthesis" evidence=IMP;NAS] [GO:0009783 "photosystem II
antenna complex" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010196 "nonphotochemical quenching"
evidence=IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] InterPro:IPR001344 Pfam:PF00504 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
GO:GO:0015979 EMBL:AC034256 HOGENOM:HOG000238033 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 GO:GO:0009783 GO:GO:0010196
UniGene:At.25300 EMBL:AF332425 EMBL:AY065113 EMBL:AY081644
IPI:IPI00524194 PIR:F86292 RefSeq:NP_173034.1 UniGene:At.15569
UniGene:At.72611 UniGene:At.74824 UniGene:At.74983
ProteinModelPortal:Q9LMQ2 SMR:Q9LMQ2 STRING:Q9LMQ2 PaxDb:Q9LMQ2
PRIDE:Q9LMQ2 DNASU:838151 EnsemblPlants:AT1G15820.1 GeneID:838151
KEGG:ath:AT1G15820 TAIR:At1g15820 eggNOG:NOG277110
InParanoid:Q9LMQ2 KO:K08917 OMA:SWIPAFK PhylomeDB:Q9LMQ2
ProtClustDB:PLN00170 ArrayExpress:Q9LMQ2 Genevestigator:Q9LMQ2
Uniprot:Q9LMQ2
Length = 258
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/120 (31%), Positives = 53/120 (44%)
Query: 24 WYEAGAVEFKFA--STRTLFIVQLLLMGFAETKRYMDYISPGSQTKE------------G 69
W+EAGA A S +L QLLLMG+ E+KR++D+ +P SQ+ E
Sbjct: 127 WFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFA 186
Query: 70 SFFGLEA-AXXXXXXXXXXXXXXXXXXXAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQA 128
++ G + D KL EIK+ RLAMVAML + +A
Sbjct: 187 NYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAMLIFYFEA 246
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 160 141 0.00091 102 3 11 22 0.40 31
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 570 (61 KB)
Total size of DFA: 129 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.37u 0.10s 10.47t Elapsed: 00:00:00
Total cpu time: 10.37u 0.10s 10.47t Elapsed: 00:00:00
Start: Sat May 11 01:54:01 2013 End: Sat May 11 01:54:01 2013