BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031425
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum
lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 104/164 (63%), Gaps = 10/164 (6%)
Query: 1 MAGVAGILFTDLLRVTGI---RELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAE 52
M G AG + ++L G+ W++ G + +A TLF++++ LMGFAE
Sbjct: 108 MLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAE 167
Query: 53 TKRYMDYISPGSQTKEGSFFGLEAALEGL-EPGYPGGPLLNPLGLAKDIRNAREWKLKEI 111
+R+ D+ PGS K+ F GLE L G +P YPGGPL NPLG KD ++ +E KLKEI
Sbjct: 168 HRRFQDWAKPGSMGKQ-YFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEI 226
Query: 112 KNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTL 155
KNGRLAM+A+LG F+QA VT VGP N+L+HL+DP + ++ +L
Sbjct: 227 KNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSL 270
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 100/158 (63%), Gaps = 8/158 (5%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M GVAG+L ++ GI +P WY AG E+ FAS+ TLF+++ +L + E +R+ D
Sbjct: 103 MLGVAGMLLPEVFTSIGIINVPKWYAAGKEEY-FASSSTLFVIEFILSHYVEIRRWQDIK 161
Query: 61 SPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVA 120
+PGS ++ F + +L E GYPGG + NPL A + E K KEI NGRLAM+A
Sbjct: 162 NPGSVNQDPIF--KQYSLPAGEVGYPGG-IFNPLNFAPTL----EAKEKEIANGRLAMLA 214
Query: 121 MLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLANS 158
LG +Q +VT GP DN+L+H+SDPWH TI+QTL +
Sbjct: 215 FLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 78 LEGL-EPGY-----PGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVT 131
L GL PGY PG +PLGLA+D N R + E+ NGR AM+ + G+ + T
Sbjct: 57 LPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT 116
Query: 132 HVGPID 137
+G I+
Sbjct: 117 SIGIIN 122
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 8/155 (5%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M GVAG+L ++ GI +P WY+AG ++ FAS+ TLF+++ +L + E +R+ D
Sbjct: 104 MLGVAGMLLPEVFTKIGIINVPEWYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIK 162
Query: 61 SPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVA 120
+PGS ++ F + +L E GYPGG + NPL A +E K KE+ NGRLAM+A
Sbjct: 163 NPGSVNQDPIF--KQYSLPKGEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLA 215
Query: 121 MLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTL 155
LG VQ +VT GP +N+L+HLSDPWH TI+QT
Sbjct: 216 FLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 54 KRYMDYISPGSQTKEGSFFGLEAA----LEGL-EPGYPGGPL-----LNPLGLAKDIRNA 103
R + + S GS K SF +EA L GL P Y G L +PLGLA+D N
Sbjct: 31 NRDLSFTSIGSSAKTSSF-KVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL 89
Query: 104 REWKLKEIKNGRLAMVAMLGIFVQASVTHVGPID 137
+ + E+ NGR AM+ + G+ + T +G I+
Sbjct: 90 KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIIN 123
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum
GN=lhca3 PE=1 SV=1
Length = 275
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 90/139 (64%), Gaps = 7/139 (5%)
Query: 23 VWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFFGLEAA 77
W++ G + +A TLF++++ LMGFAE +R+ D+ PGS K+ F GLE
Sbjct: 135 AWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQ-YFLGLEKG 193
Query: 78 LEGL-EPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPI 136
G P YPGGP NPLG KD ++ +E KLKE+KNGRLAM+A+LG F+Q VT VGP
Sbjct: 194 FGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPY 253
Query: 137 DNILEHLSDPWHKTIIQTL 155
N+L+H++DP + ++ +L
Sbjct: 254 QNLLDHVADPVNNNVLTSL 272
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 90/157 (57%), Gaps = 4/157 (2%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M G AGI +LL GI P WY AG E+ F T TLFIV+L+L+G+AE +R+ D I
Sbjct: 115 MLGAAGIFIPELLTKIGILNTPSWYTAGEQEY-FTDTTTLFIVELVLIGWAEGRRWADII 173
Query: 61 SPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAK-DIRNAREWKLKEIKNGRLAMV 119
PG + F L G + GYPGG +PLG +E + KEIKNGRLAM+
Sbjct: 174 KPGCVNTDPIF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAML 231
Query: 120 AMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 156
A++G + Q T GPIDN+ HL+DP H TI +
Sbjct: 232 AVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 81 LEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVG 134
L+ PG +PLGLA D + R + E+ + R AM+ GIF+ +T +G
Sbjct: 78 LDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIG 131
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M G AGI + L G+ P WY AG E+ F T TLF+++L+L+G+AE +R+ D I
Sbjct: 115 MLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEY-FTDTTTLFVIELVLIGWAEGRRWADII 173
Query: 61 SPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAK-DIRNAREWKLKEIKNGRLAMV 119
PG + F L G + GYPGG +PLG +E + KEIKNGRLAM+
Sbjct: 174 KPGCVNTDPIF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAML 231
Query: 120 AMLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 156
A++G + Q T GPIDN+ HL+DP H TI +
Sbjct: 232 AVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 79 EGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVG 134
E L+ PG +PLGL D + + E+ + R AM+ GIF+ +T +G
Sbjct: 76 EWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIG 131
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
Query: 1 MAGVAGILFTDLLRVTGIRELPVWYEAGAVEFKFASTRTLFIVQLLLMGFAETKRYMDYI 60
M GVAG+L ++L G+ P W E FAS+ T V + + E +R+ D
Sbjct: 83 MLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIK 141
Query: 61 SPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVA 120
+PGS ++ F +L E GYPG + NPL A E K KE+ NGRLAM+A
Sbjct: 142 NPGSVNQDPIFKSY--SLPPHECGYPGR-VFNPLNFA-----PLENKEKELANGRLAMLA 193
Query: 121 MLGIFVQASVTHVGPIDNILEHLSDPWHKTIIQTLA 156
LG VQ +V GP +N+ +HL+DPWH TIIQT++
Sbjct: 194 FLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTIS 229
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 61 SPGSQTKEGSFFGLEAALEGLE-PGYPGGPL-----LNPLGLAKDIRNAREWKLKEIKNG 114
SP S ++ + + L GL+ P Y G L +PL LA+D + R + ++ NG
Sbjct: 20 SPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNG 79
Query: 115 RLAMVAMLGIFVQASVTHVG 134
R AM+ + G+ + +T G
Sbjct: 80 RWAMLGVAGMLIPEVLTKAG 99
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F ++L G++ VW++AG+ F S ++ Q+
Sbjct: 106 MLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQV 165
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMGF E R G EGL+P YPGG +PLGLA D E
Sbjct: 166 VLMGFVEGYR----------------VGGGPLGEGLDPIYPGG-AFDPLGLADDPDAFAE 208
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADP 249
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 81/152 (53%), Gaps = 14/152 (9%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETK 54
M G G +F +LL G++ VW++AGA F +A L Q +L +A
Sbjct: 107 MLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQV 166
Query: 55 RYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNG 114
M I EG G EGL+P PGG +PLGLA D E K+KEIKNG
Sbjct: 167 VLMGLI-------EGYRVGGGTLGEGLDPLLPGG-AFDPLGLADDPEACAELKVKEIKNG 218
Query: 115 RLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
RLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 219 RLAMFSMFGFFVQAIVTGKGPIENLYDHLADP 250
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 82/160 (51%), Gaps = 31/160 (19%)
Query: 3 GVAGILFTDLL-RVTGIR-ELPVWYEAGAVEFKFASTRTL--------------FIVQLL 46
G GIL +LL + G++ PVW++AGA F L VQ++
Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVV 152
Query: 47 LMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREW 106
LMG AE R G E L+ L+ YPGGP +PLGLA D E
Sbjct: 153 LMGLAEAYRANG--------------GSEGFLDDLDTLYPGGPF-DPLGLADDPDTFAEL 197
Query: 107 KLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM + LG FVQA VT GP+ N+ +HL+DP
Sbjct: 198 KVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADP 237
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 14/152 (9%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETK 54
M G G +F +LL G++ VW++AGA F + L Q +L +A
Sbjct: 105 MLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQV 164
Query: 55 RYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNG 114
M I EG G EGL+P YPGG +PLGLA D E K+KEIKNG
Sbjct: 165 VLMGLI-------EGYRVGGGPLGEGLDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNG 216
Query: 115 RLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
RLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 217 RLAMFSMFGFFVQAIVTGKGPIENLADHIADP 248
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F ++L G++ VW++AGA F S ++ VQ+
Sbjct: 104 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQV 163
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMGF E R G EGL+ YPGG +PLGLA D E
Sbjct: 164 VLMGFVEGYR----------------VGGGPLGEGLDKVYPGG-AFDPLGLADDPDTFAE 206
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KE+KNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 207 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 247
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F ++L G++ VW++AGA F S ++ VQ+
Sbjct: 104 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQV 163
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMGF E R G EGL+ YPGG +PLGLA D E
Sbjct: 164 VLMGFVEGYR----------------VGGGPLGEGLDKVYPGG-AFDPLGLADDPDTFAE 206
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KE+KNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 207 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 247
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEF--------------KFASTRTLFIVQL 45
M G G F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 106 MLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQV 165
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMGF E R G EGL+P YPGG +PLGLA D + E
Sbjct: 166 VLMGFVEGYR----------------VGGGPLGEGLDPLYPGG-AFDPLGLADDPDSFAE 208
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KE+KNGRLAM +M G FVQA VT GPI N+ +H++DP
Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADP 249
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F ++L G++ VW++AG+ F S ++ Q+
Sbjct: 106 MLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQV 165
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMGF E R G EGL+ YPGG +PLGLA D E
Sbjct: 166 VLMGFVEGYR----------------VGGGPLGEGLDKIYPGG-AFDPLGLADDPEAFAE 208
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDP 249
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 80/152 (52%), Gaps = 14/152 (9%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETK 54
M G G +F ++L G++ VW++AG+ F + L Q +L +A
Sbjct: 106 MLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQV 165
Query: 55 RYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNG 114
M I EG G EGL+ YPGG +PLGLA D E K+KEIKNG
Sbjct: 166 VLMGLI-------EGYRVGGGPLGEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNG 217
Query: 115 RLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
RLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 218 RLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 249
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Length = 290
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 29/146 (19%)
Query: 23 VWYEAGAVEFKFAST----------RTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFF 72
W +AG VE S+ TL +++L++G+ E +R
Sbjct: 164 TWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR----------------- 206
Query: 73 GLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTH 132
A L+ + YPGG +PLGLA D + +L EIK+ RLAMVA LG VQA+ T
Sbjct: 207 --NAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATG 264
Query: 133 VGPIDNILEHLSDPWHKTIIQTLANS 158
GP++N HLSDP H TII T ++S
Sbjct: 265 KGPLNNWATHLSDPLHTTIIDTFSSS 290
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 32/162 (19%)
Query: 1 MAGVAGILFTDLL-RVTGIR-ELPVWYEAGAVEF-----------KFASTRTLFIV---Q 44
M G G +F ++L + G+ + PVW++AG+ F +++ V Q
Sbjct: 107 MLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 166
Query: 45 LLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAR 104
+LLMG E R GL+ EG + YPGG +PLGLA D
Sbjct: 167 VLLMGLVEGFRIN---------------GLDGVGEGNDL-YPGGQYFDPLGLADDPVTFA 210
Query: 105 EWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
E K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL DP
Sbjct: 211 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDP 252
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F ++L G+ VW++AG+ F S ++ Q+
Sbjct: 106 MLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQV 165
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMGF E R G EGL+ YPGG +PLGLA D E
Sbjct: 166 VLMGFVEGYR----------------VGGGPLGEGLDKIYPGG-AFDPLGLADDPEAFAE 208
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADP 249
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AGA F S ++ Q+
Sbjct: 115 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQV 174
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E +P YPGG +PLGLA+D E
Sbjct: 175 ILMGAVEGYRIA-----------GGPLG-----EVTDPIYPGGSF-DPLGLAEDPEAFAE 217
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 218 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 258
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 80/152 (52%), Gaps = 14/152 (9%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETK 54
M G G +F ++L G+ VW++AG+ F + L Q +L +A
Sbjct: 78 MLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQV 137
Query: 55 RYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNG 114
M ++ EG G EGL+ YPGG +PLGLA D E K+KEIKNG
Sbjct: 138 VLMGFV-------EGYRVGGGPLGEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNG 189
Query: 115 RLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
RLAM +M G FVQA VT GPI+N+ +H++DP
Sbjct: 190 RLAMFSMFGFFVQAIVTGKGPIENLSDHIADP 221
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E +P YPGG +PLGLA D E
Sbjct: 168 VLMGAIEGYRVA-----------GGPLG-----EVTDPLYPGGSF-DPLGLADDPEAFAE 210
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP+DN+++HL+DP
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADP 251
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +L GI+ VW++AGA F S ++ Q+
Sbjct: 108 MLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA+D E
Sbjct: 168 VLMGAVEGYRVA-----------GGPLG-----EVIDPLYPGGSF-DPLGLAEDPEAFAE 210
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S +++ Q+
Sbjct: 105 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQV 164
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA+D + E
Sbjct: 165 ILMGAVEGYRVA-----------GGPLG-----EIVDPLYPGGSF-DPLGLAEDPERSAE 207
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KE+KNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 208 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 14/152 (9%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETK 54
M G G +F +LL G++ VW++AG+ F + +L Q +L +A
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 166
Query: 55 RYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNG 114
M + EG E E ++P YPGG +PLGLA+D E K+KEIKNG
Sbjct: 167 VLMGAV-------EGYRVAGEPLGEVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNG 218
Query: 115 RLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
RLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 219 RLAMFSMFGFFVQALVTGKGPLENLADHLADP 250
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ VQ+
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQV 165
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 166 VLMGAVEGYRIA-----------GGPLG-----EVVDPLYPGG-AFDPLGLADDPEAFAE 208
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 249
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 29/146 (19%)
Query: 23 VWYEAGAVEFKFAST----------RTLFIVQLLLMGFAETKRYMDYISPGSQTKEGSFF 72
W +AG VE S+ TL +++L++G+ E +R
Sbjct: 161 TWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR----------------- 203
Query: 73 GLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTH 132
A L+ + YPGG +PLGLA D + +L EIK+ RLAMV LG VQA+ T
Sbjct: 204 --NAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATG 261
Query: 133 VGPIDNILEHLSDPWHKTIIQTLANS 158
GP++N HLSDP H TII T ++S
Sbjct: 262 KGPLNNWATHLSDPLHTTIIDTFSSS 287
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ VQ+
Sbjct: 102 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQV 161
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 162 VLMGAVEGYRIA-----------GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAE 204
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 205 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 245
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 165
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA+D E
Sbjct: 166 ILMGAVEGYRVA-----------GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAE 208
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 249
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA+D E
Sbjct: 168 VLMGAVEGYRVA-----------GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAE 210
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AGA F S ++ Q+
Sbjct: 119 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQV 178
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E +P YPGG +PLGLA D E
Sbjct: 179 ILMGAIEGYRVA-----------GGPLG-----EVTDPIYPGGNF-DPLGLADDPDAFAE 221
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 222 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 262
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 166
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA+D E
Sbjct: 167 VLMGAVEGYRVA-----------GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAE 209
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 165
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA+D E
Sbjct: 166 VLMGAVEGYRIA-----------GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAE 208
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 249
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 109 MLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV 168
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 169 ILMGAVEGYRIA-----------GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAE 211
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KE+KNGRLAM +M G FVQA VT GP++N+ +HLSDP
Sbjct: 212 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDP 252
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 168 VLMGAVEGYRVA-----------GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAE 210
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 14/152 (9%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK-----FASTRTLFIVQLLLMGFAETK 54
M G G +F +LL G++ VW++ G+ F + +L Q +L +A
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 55 RYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREWKLKEIKNG 114
M + EG E E ++P YPGG +PLGLA+D E K+KEIKNG
Sbjct: 168 VLMGAV-------EGYRVAGEPLGEVVDPLYPGGSF-DPLGLAEDPEAFAELKVKEIKNG 219
Query: 115 RLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
RLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 220 RLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 168 ILMGAVEGYRIA-----------GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAE 210
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 80/160 (50%), Gaps = 33/160 (20%)
Query: 3 GVAGILFTDLLRV-TGIR-ELPVWYEAGAVEFKFASTRTL--------------FIVQLL 46
G GIL +LL G++ PVW++AGA F L VQ++
Sbjct: 98 GALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVV 157
Query: 47 LMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAREW 106
LMG E R ++ G A EGL+P YPG +PLGLA D E
Sbjct: 158 LMGLIEGYR----VNGGP------------AGEGLDPLYPG-ESFDPLGLADDPDTFAEL 200
Query: 107 KLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM + G FVQA VT GPI N+ +HL+DP
Sbjct: 201 KVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADP 240
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 168 VLMGAVEGYRIA-----------GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAE 210
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 85 YPGGPLLNPLGLAKDIRNAREWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLS 144
+PGGP +PLGLAKD K+KEIKNGRLAM AMLG F+QA VT GP++N+ +HLS
Sbjct: 201 HPGGPF-DPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLS 259
Query: 145 DPWHKTIIQTLANS 158
DP+ ++ +A +
Sbjct: 260 DPFGNNLLTVIAGT 273
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 81/162 (50%), Gaps = 32/162 (19%)
Query: 1 MAGVAGILFTDLLR--VTGIRELPVWYEAGAVEF-----------KFASTRTLFIV---Q 44
M G G +F ++L V + PVW++AG+ F +++ V Q
Sbjct: 104 MLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 45 LLLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNAR 104
++LMG E R GL EG + YPGG +PLGLA D
Sbjct: 164 VVLMGLVEGFRIN---------------GLPGVGEGNDL-YPGGQYFDPLGLADDPTTFA 207
Query: 105 EWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
E K+KEIKNGRLAM +M G FVQA VT GP++N+L+HL +P
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNP 249
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +L G++ VW++AG+ FK S ++ Q+
Sbjct: 107 MLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQV 166
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 167 VLMGAVEGYRVA-----------GGPLG-----EVIDPLYPGGSF-DPLGLADDPEAFAE 209
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
++KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 210 LEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +L G++ VW++AG+ F S ++ Q+
Sbjct: 107 MLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 166
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 167 VLMGAVEGYRVA-----------GGPLG-----EVIDPLYPGGSF-DPLGLADDPEAFAE 209
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AGA F S ++ Q+
Sbjct: 119 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQV 178
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E +P YPGG +PLGLA D +
Sbjct: 179 ILMGAIEGYRVA-----------GGPLG-----EVTDPIYPGGNF-DPLGLADDPDAFAD 221
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GPI+N+ +HL+DP
Sbjct: 222 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 262
>sp|P20865|CB2_DUNSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella salina PE=2 SV=1
Length = 273
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 3 GVAGILFTDLL-RVTGIR--ELPVWYEAGAVEFKFASTRTL--------------FIVQL 45
G G++ +LL GI+ + +W++AGA F+ L VQ+
Sbjct: 115 GALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQV 174
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R ++ G A EGL+P YPG +PLGLA D E
Sbjct: 175 VLMGLVEGYR----VNGGP------------AGEGLDPLYPG-EAFDPLGLADDPDTFAE 217
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM A LG FVQA VT GPI+N+ +HL++P
Sbjct: 218 LKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANP 258
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++ G+ F S ++ Q+
Sbjct: 105 MLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQV 164
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 165 VLMGAVEGYRVA-----------GGPLG-----EVVDPLYPGGSF-DPLGLADDAEAFAE 207
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 248
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 110 MLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV 169
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA D E
Sbjct: 170 ILMGAVEGYRIA-----------GGPLG-----EVVDPLYPGGSF-DPLGLADDPEAFAE 212
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KE+KNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 213 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 253
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E ++P YPGG +PLGLA+D E
Sbjct: 168 VLMGAVEGYRVA-----------GGPLG-----EVVDPLYPGGSF-DPLGLAEDPEAFAE 210
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+K IKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 211 LKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
>sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max
GN=CAB2 PE=3 SV=1
Length = 256
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G +F +LL G++ VW++AG+ F S ++ Q+
Sbjct: 97 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQV 156
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E +P YPGG +PLGLA D E
Sbjct: 157 ILMGAVEGYRIA-----------GGPLG-----EVTDPIYPGGSF-DPLGLADDPEALAE 199
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KE+KNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 200 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 240
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 1 MAGVAGILFTDLLRVTGIR-ELPVWYEAGAVEFK--------------FASTRTLFIVQL 45
M G G L +LL +G++ VW++AGA F S ++ Q+
Sbjct: 109 MLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQV 168
Query: 46 LLMGFAETKRYMDYISPGSQTKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIRNARE 105
+LMG E R G G E +P YPGG +PLGLA D E
Sbjct: 169 VLMGAVEGYRVA-----------GGPLG-----EVTDPIYPGGSF-DPLGLADDPDTFAE 211
Query: 106 WKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNILEHLSDP 146
K+KEIKNGRLAM +M G FVQA VT GP++N+ +HL+DP
Sbjct: 212 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADP 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,257,854
Number of Sequences: 539616
Number of extensions: 2398518
Number of successful extensions: 5837
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5692
Number of HSP's gapped (non-prelim): 136
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)