Your job contains 1 sequence.
>031427
MTKFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAA
RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELR
QSKPAVPQPPPRAALDPWTRSRLTKNFAPPKQEKSSDAEI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031427
(160 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174804 - symbol:AT5G64650 species:3702 "Arabi... 725 1.1e-71 1
TAIR|locus:2144821 - symbol:AT5G09770 species:3702 "Arabi... 719 4.8e-71 1
TIGR_CMR|GSU_2830 - symbol:GSU_2830 "ribosomal protein L1... 322 5.6e-29 1
TIGR_CMR|SO_0257 - symbol:SO_0257 "ribosomal protein L17"... 297 2.5e-26 1
TIGR_CMR|SPO_0512 - symbol:SPO_0512 "ribosomal protein L1... 293 6.6e-26 1
UNIPROTKB|P0AG44 - symbol:rplQ "50S ribosomal subunit pro... 283 7.6e-25 1
TIGR_CMR|CPS_0627 - symbol:CPS_0627 "ribosomal protein L1... 281 1.2e-24 1
UNIPROTKB|Q9KP09 - symbol:rplQ "50S ribosomal protein L17... 274 6.8e-24 1
TIGR_CMR|VC_2570 - symbol:VC_2570 "ribosomal protein L17"... 274 6.8e-24 1
DICTYBASE|DDB_G0281435 - symbol:mrpl17 "ribosomal protein... 273 8.7e-24 1
TIGR_CMR|CBU_0264 - symbol:CBU_0264 "ribosomal protein L1... 267 3.8e-23 1
TAIR|locus:2080335 - symbol:AT3G54210 species:3702 "Arabi... 266 4.8e-23 1
TIGR_CMR|BA_0138 - symbol:BA_0138 "ribosomal protein L17"... 258 3.4e-22 1
ASPGD|ASPL0000055909 - symbol:AN1348 species:162425 "Emer... 254 9.0e-22 1
TIGR_CMR|DET_0503 - symbol:DET_0503 "ribosomal protein L1... 252 1.5e-21 1
TIGR_CMR|ECH_0433 - symbol:ECH_0433 "ribosomal protein L1... 251 1.9e-21 1
TIGR_CMR|APH_0304 - symbol:APH_0304 "ribosomal protein L1... 248 3.9e-21 1
TIGR_CMR|CJE_1768 - symbol:CJE_1768 "ribosomal protein L1... 240 2.7e-20 1
POMBASE|SPBC1271.13 - symbol:mrpl8 "mitochondrial ribosom... 226 8.3e-19 1
TIGR_CMR|NSE_0290 - symbol:NSE_0290 "ribosomal protein L1... 216 9.5e-18 1
TIGR_CMR|CHY_2280 - symbol:CHY_2280 "ribosomal protein L1... 207 8.6e-17 1
UNIPROTKB|P0A5V4 - symbol:rplQ "50S ribosomal protein L17... 205 1.4e-16 1
GENEDB_PFALCIPARUM|PF14_0289 - symbol:PF14_0289 "ribosoma... 195 1.6e-15 1
UNIPROTKB|Q8ILF5 - symbol:PF14_0289 "Mitochondrial riboso... 195 1.6e-15 1
SGD|S000003599 - symbol:MRPL8 "Mitochondrial ribosomal pr... 192 3.3e-15 1
UNIPROTKB|Q9NRX2 - symbol:MRPL17 "39S ribosomal protein L... 191 4.2e-15 1
UNIPROTKB|F1NHT8 - symbol:MRPL17 "Uncharacterized protein... 184 2.3e-14 1
UNIPROTKB|E2QYN8 - symbol:MRPL17 "Uncharacterized protein... 175 2.1e-13 1
MGI|MGI:1351608 - symbol:Mrpl17 "mitochondrial ribosomal ... 171 5.6e-13 1
GENEDB_PFALCIPARUM|PFE1125w - symbol:PFE1125w "50S riboso... 169 9.1e-13 1
UNIPROTKB|C0H4F9 - symbol:PFE1125w "Mitochondrial ribosom... 169 9.1e-13 1
UNIPROTKB|Q3T0L3 - symbol:MRPL17 "39S ribosomal protein L... 168 1.2e-12 1
UNIPROTKB|F1RMQ4 - symbol:MRPL17 "Uncharacterized protein... 167 1.5e-12 1
RGD|70943 - symbol:Mrpl17 "mitochondrial ribosomal protei... 166 1.9e-12 1
ZFIN|ZDB-GENE-040912-133 - symbol:mrpl17 "mitochondrial r... 165 2.4e-12 1
CGD|CAL0005986 - symbol:MRPL8 species:5476 "Candida albic... 122 2.3e-07 1
UNIPROTKB|E9PKV2 - symbol:MRPL17 "39S ribosomal protein L... 108 2.6e-06 1
FB|FBgn0035122 - symbol:mRpL17 "mitochondrial ribosomal p... 105 9.3e-05 1
>TAIR|locus:2174804 [details] [associations]
symbol:AT5G64650 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] HAMAP:MF_01368
InterPro:IPR000456 Pfam:PF01196 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879
ProtClustDB:CLSN2685085 Gene3D:3.90.1030.10 PANTHER:PTHR14413
SUPFAM:SSF64263 TIGRFAMs:TIGR00059 EMBL:BT025732 IPI:IPI00519064
RefSeq:NP_568992.1 UniGene:At.22735 ProteinModelPortal:Q1ECK2
SMR:Q1ECK2 STRING:Q1ECK2 PaxDb:Q1ECK2 EnsemblPlants:AT5G64650.1
GeneID:836586 KEGG:ath:AT5G64650 TAIR:At5g64650 InParanoid:Q1ECK2
OMA:YATREGG PhylomeDB:Q1ECK2 Genevestigator:Q1ECK2 Uniprot:Q1ECK2
Length = 160
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 135/160 (84%), Positives = 150/160 (93%)
Query: 1 MTKFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAA 60
MTKFRKL RP GHRMSMLRTMVSQLV+HERIETTV KAKEVRRLADNM+QLGKEGSL AA
Sbjct: 1 MTKFRKLGRPAGHRMSMLRTMVSQLVQHERIETTVTKAKEVRRLADNMIQLGKEGSLAAA 60
Query: 61 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELR 120
RRAA FVRGDDV+HK+FTELA+RYKDRAGGYTR+LR+RIRVGDAAPMAYIEF+DRENELR
Sbjct: 61 RRAAGFVRGDDVLHKIFTELAHRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120
Query: 121 QSKPAVPQPPPRAALDPWTRSRLTKNFAPPKQEKSSDAEI 160
QSKPA PQPPPR LDPW RSRLT+ +APPK+EK+SD+++
Sbjct: 121 QSKPATPQPPPRVPLDPWARSRLTRQYAPPKEEKTSDSDL 160
>TAIR|locus:2144821 [details] [associations]
symbol:AT5G09770 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
HSSP:Q9Z9H5 HOGENOM:HOG000019780 KO:K02879 ProtClustDB:CLSN2685085
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 EMBL:AY086225 EMBL:BT003108 EMBL:AK228114
IPI:IPI00524280 RefSeq:NP_568216.1 UniGene:At.32461
UniGene:At.72723 ProteinModelPortal:Q8LD39 SMR:Q8LD39 IntAct:Q8LD39
STRING:Q8LD39 PRIDE:Q8LD39 EnsemblPlants:AT5G09770.1 GeneID:830837
KEGG:ath:AT5G09770 TAIR:At5g09770 InParanoid:Q8LD39 OMA:DATEMAI
PhylomeDB:Q8LD39 Genevestigator:Q8LD39 Uniprot:Q8LD39
Length = 160
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 137/160 (85%), Positives = 147/160 (91%)
Query: 1 MTKFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAA 60
MTKFRKL RP GHRMSMLRTMVSQLVKHERIETTV KAKEVRRLADNM+QLGKEGSL AA
Sbjct: 1 MTKFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMIQLGKEGSLSAA 60
Query: 61 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELR 120
RRAA FVRGDDV+HK+FTELA+RYKDRAGGYTRLLR+RIRVGDAAPMAYIEF+DRENELR
Sbjct: 61 RRAAGFVRGDDVLHKIFTELAHRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELR 120
Query: 121 QSKPAVPQPPPRAALDPWTRSRLTKNFAPPKQEKSSDAEI 160
QSKPA PQPP R LDPW RSRLT+ FAPPK+EK D+E+
Sbjct: 121 QSKPATPQPPQRVPLDPWERSRLTRQFAPPKEEKIPDSEL 160
>TIGR_CMR|GSU_2830 [details] [associations]
symbol:GSU_2830 "ribosomal protein L17" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_01368
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
HSSP:Q9Z9H5 eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 ProtClustDB:PRK05591 RefSeq:NP_953873.1
ProteinModelPortal:Q749B4 SMR:Q749B4 GeneID:2686840
KEGG:gsu:GSU2830 PATRIC:22028505 OMA:SHQKAIF
BioCyc:GSUL243231:GH27-2782-MONOMER Uniprot:Q749B4
Length = 175
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 63/125 (50%), Positives = 89/125 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ L HERI TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSLFAHERITTTDAKAKELRSIAEKMITLGKRGDLHAVRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR--ENELRQS 122
+++R V+ KLF+ +A RYK+R GGYTR+++ IR GD AP++ IE V+ E ++++S
Sbjct: 68 SYIRDKKVVTKLFSTIAPRYKERDGGYTRIIKLGIRPGDCAPLSVIELVEEQFEKKVKKS 127
Query: 123 KPAVP 127
KP P
Sbjct: 128 KPTAP 132
>TIGR_CMR|SO_0257 [details] [associations]
symbol:SO_0257 "ribosomal protein L17" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 HSSP:Q9Z9H5 eggNOG:COG0203 HOGENOM:HOG000019780
KO:K02879 Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 ProtClustDB:PRK05591 RefSeq:NP_715897.1
ProteinModelPortal:Q8EK46 SMR:Q8EK46 GeneID:1168140
KEGG:son:SO_0257 PATRIC:23520207 OMA:YKRIETT Uniprot:Q8EK46
Length = 131
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 60/111 (54%), Positives = 78/111 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>TIGR_CMR|SPO_0512 [details] [associations]
symbol:SPO_0512 "ribosomal protein L17" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] HAMAP:MF_01368
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
HSSP:Q9Z9H5 eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 ProtClustDB:PRK05591 OMA:SHQKAIF
RefSeq:YP_165774.1 ProteinModelPortal:Q5LW31 SMR:Q5LW31
GeneID:3195334 KEGG:sil:SPO0512 PATRIC:23374287 Uniprot:Q5LW31
Length = 140
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+R+LNR HR ++ M L++HE+I+TT+ KAKE+R + + ++ LGK G L A R+A
Sbjct: 7 YRRLNRTHEHRKALFANMAGSLIEHEQIKTTLPKAKELRPIVEKLITLGKRGDLHARRQA 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
AA ++ D + KLF LA RYKDR GGY R+L++ R GD APMA IEFVDR+
Sbjct: 67 AAQLKEDKDVAKLFDVLAERYKDRQGGYVRILKAGFRYGDMAPMAIIEFVDRD 119
>UNIPROTKB|P0AG44 [details] [associations]
symbol:rplQ "50S ribosomal subunit protein L17"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] HAMAP:MF_01368
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 EMBL:U18997 GO:GO:0005840 GO:GO:0003735 PDB:2RDO
PDBsum:2RDO eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12
PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y
PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS
PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB
PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO
PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV
PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3E1B
PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20
PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS
PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0
PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2WWQ PDBsum:2Z4L
PDBsum:2Z4N PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
ProtClustDB:PRK05591 EMBL:X02543 EMBL:J01685 EMBL:X00766 PIR:B22884
RefSeq:NP_417753.1 RefSeq:YP_492138.1 ProteinModelPortal:P0AG44
SMR:P0AG44 DIP:DIP-35801N IntAct:P0AG44 MINT:MINT-1251899
PaxDb:P0AG44 PRIDE:P0AG44 EnsemblBacteria:EBESCT00000001152
EnsemblBacteria:EBESCT00000015807 GeneID:12934436 GeneID:947784
KEGG:ecj:Y75_p3882 KEGG:eco:b3294 PATRIC:32122020 EchoBASE:EB0871
EcoGene:EG10878 OMA:VVEPMIT BioCyc:EcoCyc:EG10878-MONOMER
BioCyc:ECOL316407:JW3256-MONOMER EvolutionaryTrace:P0AG44
Genevestigator:P0AG44 Uniprot:P0AG44
Length = 127
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 56/114 (49%), Positives = 76/114 (66%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENE 118
A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR +
Sbjct: 68 ARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
>TIGR_CMR|CPS_0627 [details] [associations]
symbol:CPS_0627 "ribosomal protein L17" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] HAMAP:MF_01368
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059
ProtClustDB:PRK05591 OMA:LIMNERI HSSP:Q9NRX2 RefSeq:YP_267377.1
ProteinModelPortal:Q488Y7 SMR:Q488Y7 STRING:Q488Y7 PRIDE:Q488Y7
GeneID:3523270 KEGG:cps:CPS_0627 PATRIC:21464581
BioCyc:CPSY167879:GI48-714-MONOMER Uniprot:Q488Y7
Length = 134
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 58/111 (52%), Positives = 75/111 (67%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LVKH I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVKHGVIKTTVAKAKELRRVLEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A + +V+ LF EL RY++R GGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTQDKEVVGILFNELGARYQERPGGYTRILKCGFRTGDKAPMAYIELVDR 118
>UNIPROTKB|Q9KP09 [details] [associations]
symbol:rplQ "50S ribosomal protein L17" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] HAMAP:MF_01368 InterPro:IPR000456
Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 HSSP:Q9Z9H5
eggNOG:COG0203 KO:K02879 Gene3D:3.90.1030.10 PANTHER:PTHR14413
SUPFAM:SSF64263 TIGRFAMs:TIGR00059 ProtClustDB:PRK05591 OMA:VVEPMIT
PIR:H82060 RefSeq:NP_232198.1 ProteinModelPortal:Q9KP09 SMR:Q9KP09
PRIDE:Q9KP09 DNASU:2615587 GeneID:2615587 KEGG:vch:VC2570
PATRIC:20084166 Uniprot:Q9KP09
Length = 128
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/111 (50%), Positives = 74/111 (66%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRKAMFSNMASSLVRHEVIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R ++V+ KLF EL R+ R GGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNEVVAKLFNELGPRFAARQGGYTRILKCGFRAGDKAPMAYIELVDR 118
>TIGR_CMR|VC_2570 [details] [associations]
symbol:VC_2570 "ribosomal protein L17" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 HSSP:Q9Z9H5 eggNOG:COG0203 KO:K02879
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 ProtClustDB:PRK05591 OMA:VVEPMIT PIR:H82060
RefSeq:NP_232198.1 ProteinModelPortal:Q9KP09 SMR:Q9KP09
PRIDE:Q9KP09 DNASU:2615587 GeneID:2615587 KEGG:vch:VC2570
PATRIC:20084166 Uniprot:Q9KP09
Length = 128
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/111 (50%), Positives = 74/111 (66%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRKAMFSNMASSLVRHEVIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R ++V+ KLF EL R+ R GGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNEVVAKLFNELGPRFAARQGGYTRILKCGFRAGDKAPMAYIELVDR 118
>DICTYBASE|DDB_G0281435 [details] [associations]
symbol:mrpl17 "ribosomal protein L17, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000456 Pfam:PF01196
PROSITE:PS01167 dictyBase:DDB_G0281435 GO:GO:0005739
GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
EMBL:AAFI02000041 GO:GO:0003735 HSSP:Q9Z9H5 eggNOG:COG0203
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 RefSeq:XP_640676.1 ProteinModelPortal:Q54TY5
STRING:Q54TY5 PRIDE:Q54TY5 EnsemblProtists:DDB0267020
GeneID:8623060 KEGG:ddi:DDB_G0281435 OMA:TIAKRNT
ProtClustDB:CLSZ2430548 Uniprot:Q54TY5
Length = 182
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 57/117 (48%), Positives = 80/117 (68%)
Query: 3 KFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARR 62
K KL R + HRM MLRTMV+QL++HERI+TT+AKAK +R+ AD ++ + K + +
Sbjct: 6 KLAKLGRESHHRMLMLRTMVTQLIRHERIKTTLAKAKALRKEADRIITIAKRNTRLSHSL 65
Query: 63 AAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENEL 119
++V VI KLF EL R+ DR GGYTR+L++ R+ D + MAYIE+V EN+L
Sbjct: 66 VYSYVTDKQVIPKLFKELRLRFGDRPGGYTRVLKAGSRLSDRSKMAYIEYV--ENDL 120
>TIGR_CMR|CBU_0264 [details] [associations]
symbol:CBU_0264 "ribosomal protein L17" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] HAMAP:MF_01368 InterPro:IPR000456
Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 HSSP:Q9Z9H5
eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059
ProtClustDB:PRK05591 OMA:LIMNERI RefSeq:NP_819308.1
ProteinModelPortal:Q83EQ1 SMR:Q83EQ1 GeneID:1208145
KEGG:cbu:CBU_0264 PATRIC:17929221
BioCyc:CBUR227377:GJ7S-271-MONOMER Uniprot:Q83EQ1
Length = 126
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 54/112 (48%), Positives = 76/112 (67%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R LNR + HR +MLR M L +HE I+TT+ KAKE+RR+ + ++ L KE ++ R A
Sbjct: 8 RHLNRTSAHRKAMLRNMAVSLFQHELIKTTLPKAKELRRVVEPLITLAKEDTVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
+R D ++ KLF E+A R+K+R GGY R+L+ R GD+APMA +E VDRE
Sbjct: 68 NRLRDDAIVAKLFKEIAPRHKERPGGYCRVLKYGFRNGDSAPMAIVELVDRE 119
>TAIR|locus:2080335 [details] [associations]
symbol:AT3G54210 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0009941
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:AL132957
EMBL:BT000413 EMBL:AY136290 EMBL:AY124804 EMBL:AF375425
EMBL:AY086449 IPI:IPI00543640 PIR:T47580 RefSeq:NP_190989.1
UniGene:At.27695 HSSP:Q9Z9H5 ProteinModelPortal:Q9M385 SMR:Q9M385
STRING:Q9M385 PaxDb:Q9M385 PRIDE:Q9M385 EnsemblPlants:AT3G54210.1
GeneID:824588 KEGG:ath:AT3G54210 GeneFarm:90 TAIR:At3g54210
eggNOG:COG0203 HOGENOM:HOG000019780 InParanoid:Q9M385 KO:K02879
OMA:PPDQRKA PhylomeDB:Q9M385 ProtClustDB:CLSN2685085
Genevestigator:Q9M385 GermOnline:AT3G54210 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059 Uniprot:Q9M385
Length = 211
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 52/108 (48%), Positives = 73/108 (67%)
Query: 6 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAA 65
KLNRP R ++LR + +QL+KH RI+TT A+A +R+ D M+ L K+GSL R+A
Sbjct: 104 KLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALG 163
Query: 66 FVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
++ ++H LF E+ RY +R GGYTR++R+ R GD APMAYIE V
Sbjct: 164 YIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 211
>TIGR_CMR|BA_0138 [details] [associations]
symbol:BA_0138 "ribosomal protein L17" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 HSSP:Q9Z9H5 eggNOG:COG0203
HOGENOM:HOG000019780 KO:K02879 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059
ProtClustDB:PRK05591 RefSeq:NP_842706.1 RefSeq:YP_016743.1
RefSeq:YP_026424.1 ProteinModelPortal:Q81VQ3 DNASU:1087068
EnsemblBacteria:EBBACT00000012873 EnsemblBacteria:EBBACT00000015715
EnsemblBacteria:EBBACT00000019230 GeneID:1087068 GeneID:2818247
GeneID:2851413 KEGG:ban:BA_0138 KEGG:bar:GBAA_0138 KEGG:bat:BAS0138
OMA:LIMNERI BioCyc:BANT260799:GJAJ-149-MONOMER
BioCyc:BANT261594:GJ7F-151-MONOMER Uniprot:Q81VQ3
Length = 120
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 55/118 (46%), Positives = 76/118 (64%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R + R +MLR + + L+ +ERI+TT +AKE+R + + M+ LGK G L A R+A
Sbjct: 3 YRKLGRTSAQRKAMLRDLATDLIINERIQTTETRAKELRSVVEKMITLGKRGDLHARRQA 62
Query: 64 AAFVR--------GDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
AAF+R G D + KLF ++A RY +R GGYTR+ + R GDAAPM IE V
Sbjct: 63 AAFIRNEVANAETGQDALQKLFADVAPRYAERQGGYTRIAKIGPRRGDAAPMVIIELV 120
>ASPGD|ASPL0000055909 [details] [associations]
symbol:AN1348 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0000002 "mitochondrial
genome maintenance" evidence=IEA] HAMAP:MF_01368 InterPro:IPR000456
Pfam:PF01196 PROSITE:PS01167 EMBL:BN001308 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AACD01000018 eggNOG:COG0203
HOGENOM:HOG000019780 Gene3D:3.90.1030.10 PANTHER:PTHR14413
SUPFAM:SSF64263 TIGRFAMs:TIGR00059 OMA:VDGPKDM OrthoDB:EOG4GMZ6J
RefSeq:XP_658952.1 ProteinModelPortal:Q5BDN2 STRING:Q5BDN2
EnsemblFungi:CADANIAT00001264 GeneID:2877126 KEGG:ani:AN1348.2
Uniprot:Q5BDN2
Length = 211
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 53/119 (44%), Positives = 76/119 (63%)
Query: 3 KFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARR 62
K+R L+R + HR ++LR +V+ L KHE I TT AKAKE +RLA+ ++ LGK+ + + R
Sbjct: 7 KYRHLSRKSSHRQALLRNLVTSLFKHESITTTWAKAKEAQRLAEKLITLGKKNTETSRRT 66
Query: 63 A-AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELR 120
A + F +++ KLF L RY DR GGYTR+LR + D AP A +E VD ++R
Sbjct: 67 ALSTFYTPHEILPKLFGPLRERYADRPGGYTRVLRVEPKKDDQAPSAILELVDGPKDMR 125
>TIGR_CMR|DET_0503 [details] [associations]
symbol:DET_0503 "ribosomal protein L17" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0203 HOGENOM:HOG000019780
KO:K02879 Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 OMA:MRHQLRI ProtClustDB:PRK05591 HSSP:Q9NRX2
RefSeq:YP_181247.1 ProteinModelPortal:Q3Z952 STRING:Q3Z952
GeneID:3230212 KEGG:det:DET0503 PATRIC:21608075
BioCyc:DETH243164:GJNF-503-MONOMER Uniprot:Q3Z952
Length = 117
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 49/109 (44%), Positives = 73/109 (66%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RK +RPTG RMS+ R +V+ L+ +E I + +AKE+R +A+ M+ LGK+G+L + RRA
Sbjct: 8 RKFDRPTGQRMSLYRNLVTDLLNYEEITISEPRAKEIRSMAEKMITLGKKGTLASRRRAL 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
AFV ++ K+F +L+ RY +R GGYTR+ + R GD A M +E V
Sbjct: 68 AFVYIPGIVDKVFEDLSKRYAERPGGYTRMTKLGPRQGDGAEMVKLELV 116
>TIGR_CMR|ECH_0433 [details] [associations]
symbol:ECH_0433 "ribosomal protein L17" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 ProtClustDB:PRK05591 OMA:LIMNERI
RefSeq:YP_507251.1 ProteinModelPortal:Q2GH32 SMR:Q2GH32
STRING:Q2GH32 GeneID:3927393 KEGG:ech:ECH_0433 PATRIC:20576343
BioCyc:ECHA205920:GJNR-434-MONOMER Uniprot:Q2GH32
Length = 133
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 52/116 (44%), Positives = 75/116 (64%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGK---EGSLCAAR 61
RK +R + HRMSML + L+KHERI TT+ KAKE+R + ++ +GK E +L +
Sbjct: 8 RKFSRTSAHRMSMLLNLCISLIKHERISTTLPKAKEIRPYVEKLITIGKVYKEKNLVYGK 67
Query: 62 RAA-AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
R + ++ D+ KL L+ RYK R GGYTR++++ R GD+APMA IE VDR+
Sbjct: 68 RLLISKIKNPDIADKLIGILSVRYKSRNGGYTRIIKNGFRKGDSAPMAIIELVDRQ 123
>TIGR_CMR|APH_0304 [details] [associations]
symbol:APH_0304 "ribosomal protein L17" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] HAMAP:MF_01368
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059
RefSeq:YP_504916.1 ProteinModelPortal:Q2GL35 SMR:Q2GL35
STRING:Q2GL35 GeneID:3930381 KEGG:aph:APH_0304 PATRIC:20949182
OMA:MRHQLRI ProtClustDB:PRK05591 BioCyc:APHA212042:GHPM-334-MONOMER
Uniprot:Q2GL35
Length = 132
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 52/122 (42%), Positives = 77/122 (63%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGS----LCA 59
+RK +RPT HRM+M+ + LV ERI TT+ KAK++R + + ++ + K S +C
Sbjct: 7 YRKFSRPTAHRMAMMMNLAVSLVTSERIVTTLPKAKDLRSVVEGLITIAKRYSQKDPVCG 66
Query: 60 ARRAAAFVRGDD-VIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENE 118
R + G+ V +KL LA RYK+R GGYTR++++ R GD AP+A IE VDRE +
Sbjct: 67 RRLLLSRTSGNSSVTNKLLGVLAQRYKNRNGGYTRIMKNGFRKGDCAPIAIIELVDREKD 126
Query: 119 LR 120
L+
Sbjct: 127 LK 128
>TIGR_CMR|CJE_1768 [details] [associations]
symbol:CJE_1768 "ribosomal protein L17" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] HAMAP:MF_01368 InterPro:IPR000456
Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735 HSSP:Q9Z9H5
eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059
ProtClustDB:PRK05591 OMA:LIMNERI RefSeq:YP_179740.1
ProteinModelPortal:Q5HSJ5 STRING:Q5HSJ5 GeneID:3232395
KEGG:cjr:CJE1768 PATRIC:20045346
BioCyc:CJEJ195099:GJC0-1798-MONOMER Uniprot:Q5HSJ5
Length = 117
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/110 (43%), Positives = 73/110 (66%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R + HR ++L+ + LV +IETT+ KAKE+R + ++ + G A R
Sbjct: 7 YRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKELRGYVERLITRARLGDFNAHRAV 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
A ++ + +KL TE+A ++KDR GGYTR++++RIR GDAA MA+IEFV
Sbjct: 67 FASLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRIRRGDAAEMAFIEFV 116
>POMBASE|SPBC1271.13 [details] [associations]
symbol:mrpl8 "mitochondrial ribosomal protein subunit L8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 PomBase:SPBC1271.13
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 GO:GO:0000002 HSSP:Q9Z9H5 eggNOG:COG0203
HOGENOM:HOG000019780 Gene3D:3.90.1030.10 PANTHER:PTHR14413
SUPFAM:SSF64263 TIGRFAMs:TIGR00059 PIR:T39349 RefSeq:NP_595137.1
ProteinModelPortal:O94345 STRING:O94345 EnsemblFungi:SPBC1271.13.1
GeneID:2540205 KEGG:spo:SPBC1271.13 OMA:VDGPKDM OrthoDB:EOG4GMZ6J
NextBio:20801337 Uniprot:O94345
Length = 207
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 59/154 (38%), Positives = 83/154 (53%)
Query: 1 MTK---FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSL 57
MTK +RKL R + HR ++LR +V+ LVKHE I+TT AKAKE +R A+ ++ + K +
Sbjct: 1 MTKTLYYRKLGRTSAHRQALLRNLVTSLVKHESIQTTWAKAKEAQRFAEKLITMAKRANP 60
Query: 58 CAARRAAA---FVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 114
R+ A + + K+F L RY R GYTRLL+ R D APM +EFVD
Sbjct: 61 QNNRKGLAEGMVFEKETTLKKVFDVLVPRYNGRRCGYTRLLKLPPRSTDNAPMGVLEFVD 120
Query: 115 RENELR---QSKPAVPQPPPRAALDPWTRSRLTK 145
++R +K + AL P TR + K
Sbjct: 121 GPKDIRFHMTAKTVGICLAQQKALTPITRKNIHK 154
>TIGR_CMR|NSE_0290 [details] [associations]
symbol:NSE_0290 "ribosomal protein L17" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0203 HOGENOM:HOG000019780
KO:K02879 Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 RefSeq:YP_506181.1 ProteinModelPortal:Q2GEB5
STRING:Q2GEB5 GeneID:3931555 KEGG:nse:NSE_0290 PATRIC:22680673
OMA:ISDNSEV ProtClustDB:CLSK2528067
BioCyc:NSEN222891:GHFU-317-MONOMER Uniprot:Q2GEB5
Length = 117
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 43/112 (38%), Positives = 71/112 (63%)
Query: 3 KFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGK-EGSLCAAR 61
K +L+R + HRMS++ + +++H R++TT+AKA+ +R + ++ + SL R
Sbjct: 6 KKHRLSRNSSHRMSLICNLSVSIIEHGRLQTTLAKARALRPFIEKLITKARVPDSLSVRR 65
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
+ ++ + + KL E+A RY DR GGY R++++ RVGDAAPMA IEFV
Sbjct: 66 LLLSRIKNEAAVTKLINEVARRYTDRPGGYCRIVKTGYRVGDAAPMAIIEFV 117
>TIGR_CMR|CHY_2280 [details] [associations]
symbol:CHY_2280 "ribosomal protein L17" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_01368 InterPro:IPR000456 Pfam:PF01196
PROSITE:PS01167 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0203
HOGENOM:HOG000019780 KO:K02879 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059 OMA:MRHQLRI
RefSeq:YP_361089.1 HSSP:Q9NRX2 ProteinModelPortal:Q3A9U5
STRING:Q3A9U5 GeneID:3727578 KEGG:chy:CHY_2280 PATRIC:21277631
BioCyc:CHYD246194:GJCN-2279-MONOMER Uniprot:Q3A9U5
Length = 112
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 42/108 (38%), Positives = 67/108 (62%)
Query: 6 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAA 65
KL R HR +MLR +V+ L+K +I TT A+ K + +A+ ++ L K +L R+A A
Sbjct: 5 KLGRRKDHREAMLRNLVTSLLKEGKIITTEARGKSAKAVAEKLITLAKNDTLHNRRQALA 64
Query: 66 FVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
++ ++V+ KLF E+ +Y DR GGYTR+++ R GD A M +E +
Sbjct: 65 YLYEENVVRKLFKEIGPKYADRPGGYTRIVKIGPRRGDGAMMVLVELL 112
>UNIPROTKB|P0A5V4 [details] [associations]
symbol:rplQ "50S ribosomal protein L17" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01368
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 GO:GO:0005886
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842583 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0203 HOGENOM:HOG000019780 KO:K02879
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 ProtClustDB:PRK05591 OMA:SHQKAIF PIR:E70565
RefSeq:NP_217973.1 RefSeq:NP_338088.1 RefSeq:YP_006516945.1
ProteinModelPortal:P0A5V4 SMR:P0A5V4 PhosSite:P12071645
PRIDE:P0A5V4 EnsemblBacteria:EBMYCT00000002615
EnsemblBacteria:EBMYCT00000069665 GeneID:13317063 GeneID:887523
GeneID:926627 KEGG:mtc:MT3563 KEGG:mtu:Rv3456c KEGG:mtv:RVBD_3456c
PATRIC:18129563 TubercuList:Rv3456c Uniprot:P0A5V4
Length = 180
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 45/115 (39%), Positives = 67/115 (58%)
Query: 2 TKFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAAR 61
TK +L + H+ ++L + + L +H RI TT KA+ +R A+ ++ K+G+L R
Sbjct: 5 TKGPRLGGSSSHQKAILANLATSLFEHGRITTTEPKARALRPYAEKLITHAKKGALHNRR 64
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
+R DV+H LF E+ + DR GGYTR+++ R GD APMA IE V RE
Sbjct: 65 EVLKKLRDKDVVHTLFAEIGPFFADRDGGYTRIIKIEARKGDNAPMAVIELV-RE 118
>GENEDB_PFALCIPARUM|PF14_0289 [details] [associations]
symbol:PF14_0289 "ribosomal protein L17,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000456 Pfam:PF01196
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE014187 HSSP:Q9Z9H5
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263 GO:GO:0000315
RefSeq:XP_001348463.1 ProteinModelPortal:Q8ILF5 IntAct:Q8ILF5
MINT:MINT-1745505 EnsemblProtists:PF14_0289:mRNA GeneID:811871
KEGG:pfa:PF14_0289 EuPathDB:PlasmoDB:PF3D7_1431000
HOGENOM:HOG000281248 OMA:DSAPLAY ProtClustDB:PTZ00076
Uniprot:Q8ILF5
Length = 257
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 39/122 (31%), Positives = 75/122 (61%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
FR+ ++ H+ ++ +++L+K+ RIETT+ KAKE++ A+ ++ L K+ ++ +
Sbjct: 19 FRRAHKQPHHKWDSIKNQLNELLKYGRIETTLTKAKELQGYAEELIYLAKKDNVENNLKV 78
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRS-RIRVGDAAPMAYIEFVDRENELRQS 122
+ +R +L+ Y+ R +TR++ ++R+ D+AP+AYIEF+DR ELR +
Sbjct: 79 ESMLRTAQGRRRLYEFYVPLYRHRPFFFTRIINQWKLRLRDSAPLAYIEFIDRPGELRPA 138
Query: 123 KP 124
KP
Sbjct: 139 KP 140
>UNIPROTKB|Q8ILF5 [details] [associations]
symbol:PF14_0289 "Mitochondrial ribosomal protein L17-2,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000456 Pfam:PF01196
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE014187 HSSP:Q9Z9H5
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263 GO:GO:0000315
RefSeq:XP_001348463.1 ProteinModelPortal:Q8ILF5 IntAct:Q8ILF5
MINT:MINT-1745505 EnsemblProtists:PF14_0289:mRNA GeneID:811871
KEGG:pfa:PF14_0289 EuPathDB:PlasmoDB:PF3D7_1431000
HOGENOM:HOG000281248 OMA:DSAPLAY ProtClustDB:PTZ00076
Uniprot:Q8ILF5
Length = 257
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 39/122 (31%), Positives = 75/122 (61%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
FR+ ++ H+ ++ +++L+K+ RIETT+ KAKE++ A+ ++ L K+ ++ +
Sbjct: 19 FRRAHKQPHHKWDSIKNQLNELLKYGRIETTLTKAKELQGYAEELIYLAKKDNVENNLKV 78
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRS-RIRVGDAAPMAYIEFVDRENELRQS 122
+ +R +L+ Y+ R +TR++ ++R+ D+AP+AYIEF+DR ELR +
Sbjct: 79 ESMLRTAQGRRRLYEFYVPLYRHRPFFFTRIINQWKLRLRDSAPLAYIEFIDRPGELRPA 138
Query: 123 KP 124
KP
Sbjct: 139 KP 140
>SGD|S000003599 [details] [associations]
symbol:MRPL8 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0000002
"mitochondrial genome maintenance" evidence=IMP] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IPI] [GO:0032543
"mitochondrial translation" evidence=IC] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000456 Pfam:PF01196
PROSITE:PS01167 SGD:S000003599 EMBL:BK006943 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 GO:GO:0000002 EMBL:Z49338 EMBL:Z34288
eggNOG:COG0203 Gene3D:3.90.1030.10 PANTHER:PTHR14413
SUPFAM:SSF64263 TIGRFAMs:TIGR00059 OrthoDB:EOG4GMZ6J EMBL:X53841
EMBL:AY558249 PIR:S50809 RefSeq:NP_012472.1
ProteinModelPortal:P22353 SMR:P22353 DIP:DIP-5672N IntAct:P22353
MINT:MINT-497599 STRING:P22353 PaxDb:P22353 PeptideAtlas:P22353
EnsemblFungi:YJL063C GeneID:853382 KEGG:sce:YJL063C
HOGENOM:HOG000141790 OMA:LIRHEYI NextBio:973837
Genevestigator:P22353 GermOnline:YJL063C Uniprot:P22353
Length = 238
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 46/122 (37%), Positives = 72/122 (59%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEG-----SLCA 59
RKL+R HR ++L+ + QL +HE I +T AK KE R+A+ ++ K S+
Sbjct: 7 RKLSRDKAHRDALLKNLACQLFQHESIVSTHAKCKEASRVAERIITWTKRAITTSNSVAQ 66
Query: 60 AR-----RAAAFVRGDD--VIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEF 112
A ++ F+ GD+ ++ +LF+E+A RY +R GGYTR+LR R D+AP + +E
Sbjct: 67 AELKSQIQSQLFLAGDNRKLMKRLFSEIAPRYLERPGGYTRVLRLEPRANDSAPQSVLEL 126
Query: 113 VD 114
VD
Sbjct: 127 VD 128
>UNIPROTKB|Q9NRX2 [details] [associations]
symbol:MRPL17 "39S ribosomal protein L17, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IPI] InterPro:IPR000456 Pfam:PF01196
PROSITE:PS01167 EMBL:CH471064 GO:GO:0005743 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0203 HOGENOM:HOG000019780
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 OMA:LIMNERI CTD:63875 HOVERGEN:HBG056029
OrthoDB:EOG41C6XH EMBL:AF164797 EMBL:AF141338 EMBL:AK026857
EMBL:CR457177 EMBL:BC012306 EMBL:AB051620 IPI:IPI00172591
RefSeq:NP_071344.1 UniGene:Hs.523456 UniGene:Hs.708782 PDB:2CQM
PDBsum:2CQM ProteinModelPortal:Q9NRX2 SMR:Q9NRX2 STRING:Q9NRX2
PhosphoSite:Q9NRX2 DMDM:74752931 PaxDb:Q9NRX2 PeptideAtlas:Q9NRX2
PRIDE:Q9NRX2 DNASU:63875 Ensembl:ENST00000288937 GeneID:63875
KEGG:hsa:63875 UCSC:uc001men.2 GeneCards:GC11M006659
HGNC:HGNC:14053 HPA:HPA043666 HPA:HPA050552 MIM:611830
neXtProt:NX_Q9NRX2 PharmGKB:PA30946 InParanoid:Q9NRX2
EvolutionaryTrace:Q9NRX2 GenomeRNAi:63875 NextBio:65556
ArrayExpress:Q9NRX2 Bgee:Q9NRX2 CleanEx:HS_MRPL17
Genevestigator:Q9NRX2 GermOnline:ENSG00000158042 Uniprot:Q9NRX2
Length = 175
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 46/111 (41%), Positives = 66/111 (59%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AAR 61
FR++ R+ +LR +++ LV+HERIE A+ E+R A+ ++ GK G A R
Sbjct: 15 FRRMGLGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKLGDTNERAMR 74
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEF 112
A ++ D+I KLF LA RYKD+ GGYTR+L+ R D A MA IE+
Sbjct: 75 MADFWLTEKDLIPKLFQVLAPRYKDQTGGYTRMLQIPNRSLDRAKMAVIEY 125
>UNIPROTKB|F1NHT8 [details] [associations]
symbol:MRPL17 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR000456 Pfam:PF01196 GO:GO:0005743
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059
GeneTree:ENSGT00390000010698 OMA:DEVRFYA EMBL:AADN02060538
IPI:IPI00811306 Ensembl:ENSGALT00000004103 Uniprot:F1NHT8
Length = 167
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 46/111 (41%), Positives = 63/111 (56%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AAR 61
FR+L R R+ +LR +V+ LV+HERIE A+A E+R A+ ++ K G A R
Sbjct: 19 FRRLGRGPRSRLDLLRNLVTALVRHERIEAPWARADEMRGYAERLIDYAKRGDTDERAMR 78
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVG-DAAPMAYIE 111
A ++ D+IHKLF LA R++ G YTR+L R D A MA IE
Sbjct: 79 MADFWLTEKDLIHKLFKVLAPRFQPHPGSYTRMLHIPNRDSLDRAKMAVIE 129
>UNIPROTKB|E2QYN8 [details] [associations]
symbol:MRPL17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000456 Pfam:PF01196
GO:GO:0005743 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 GeneTree:ENSGT00390000010698 OMA:DEVRFYA
EMBL:AAEX03012868 Ensembl:ENSCAFT00000010629 NextBio:20895767
Uniprot:E2QYN8
Length = 208
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 45/112 (40%), Positives = 66/112 (58%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AAR 61
FR+L R+ +LR +++ LV+HERIE + A+ E+R A+ ++ GK G A R
Sbjct: 51 FRRLGLGPESRIHLLRNLLTGLVRHERIEASWARVDEMRGYAEKLIDYGKLGDTNEQAMR 110
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVG-DAAPMAYIEF 112
A ++ D+I KLF LA RY+ + GGYTR+L+ R D A MA IE+
Sbjct: 111 MADFWLTEKDLIPKLFQVLAPRYQGQNGGYTRMLQIPNRSKQDRAKMAVIEY 162
>MGI|MGI:1351608 [details] [associations]
symbol:Mrpl17 "mitochondrial ribosomal protein L17"
species:10090 "Mus musculus" [GO:0000002 "mitochondrial genome
maintenance" evidence=TAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 MGI:MGI:1351608
GO:GO:0005743 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
GO:GO:0000002 eggNOG:COG0203 HOGENOM:HOG000019780
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 CTD:63875 GeneTree:ENSGT00390000010698
HOVERGEN:HBG056029 OMA:DEVRFYA OrthoDB:EOG41C6XH EMBL:AK007828
EMBL:AK144092 EMBL:AK147957 EMBL:BC010718 IPI:IPI00111784
IPI:IPI00473469 RefSeq:NP_079577.1 UniGene:Mm.44225
ProteinModelPortal:Q9D8P4 SMR:Q9D8P4 STRING:Q9D8P4
PhosphoSite:Q9D8P4 PaxDb:Q9D8P4 PRIDE:Q9D8P4
Ensembl:ENSMUST00000124482 GeneID:27397 KEGG:mmu:27397
UCSC:uc009izl.1 UCSC:uc009izm.1 InParanoid:Q9D8P4 NextBio:305376
Bgee:Q9D8P4 CleanEx:MM_MRPL17 Genevestigator:Q9D8P4
GermOnline:ENSMUSG00000030879 Uniprot:Q9D8P4
Length = 176
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 49/129 (37%), Positives = 73/129 (56%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AAR 61
+R+L R+ +LR +++ LV+HERIE T A+A E+R A+ ++ GK G A R
Sbjct: 15 YRRLGLGPESRIHLLRNLLTGLVRHERIEATWARADEMRGYAEKLIDYGKLGDTNERAMR 74
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVG-DAAPMAYIEFVDRENELR 120
A ++ D+I KLF LA R++ + G YTR+L+ R D A MA IE+ + N L
Sbjct: 75 MADFWLTEKDLIPKLFKVLAPRFQGQNGNYTRMLQIPNRKEQDRAKMAVIEY--KGNYL- 131
Query: 121 QSKPAVPQP 129
P +P P
Sbjct: 132 ---PPLPLP 137
>GENEDB_PFALCIPARUM|PFE1125w [details] [associations]
symbol:PFE1125w "50S ribosomal subunit protein
L17, putative" species:5833 "Plasmodium falciparum" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS]
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 EMBL:AL844504 HOGENOM:HOG000019780
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 RefSeq:XP_002808710.1 ProteinModelPortal:C0H4F9
EnsemblProtists:PFE1125w:mRNA GeneID:813040 KEGG:pfa:PFE1125w
EuPathDB:PlasmoDB:PF3D7_0522500 ProtClustDB:CLSZ2433957
Uniprot:C0H4F9
Length = 166
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKE---GSLCAA 60
FRKL R R ++LR + + L+++ +I TT AKAKE RR D ++ K+ A
Sbjct: 53 FRKLGRDRAQRRALLRALTTSLLRYGKIVTTEAKAKETRRKVDRIITYAKKHDNNRQYAY 112
Query: 61 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRL-LRSRIRVGDAAPMAYIEFV 113
R A +V ++ + + RYK+R GGYT++ L + R GDA+ MA +E +
Sbjct: 113 RLIANYVYDRELALNVVKQAPVRYKERHGGYTKIKLLPKSRKGDASRMAMLELL 166
>UNIPROTKB|C0H4F9 [details] [associations]
symbol:PFE1125w "Mitochondrial ribosomal protein L17,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS]
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 EMBL:AL844504 HOGENOM:HOG000019780
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
TIGRFAMs:TIGR00059 RefSeq:XP_002808710.1 ProteinModelPortal:C0H4F9
EnsemblProtists:PFE1125w:mRNA GeneID:813040 KEGG:pfa:PFE1125w
EuPathDB:PlasmoDB:PF3D7_0522500 ProtClustDB:CLSZ2433957
Uniprot:C0H4F9
Length = 166
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKE---GSLCAA 60
FRKL R R ++LR + + L+++ +I TT AKAKE RR D ++ K+ A
Sbjct: 53 FRKLGRDRAQRRALLRALTTSLLRYGKIVTTEAKAKETRRKVDRIITYAKKHDNNRQYAY 112
Query: 61 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRL-LRSRIRVGDAAPMAYIEFV 113
R A +V ++ + + RYK+R GGYT++ L + R GDA+ MA +E +
Sbjct: 113 RLIANYVYDRELALNVVKQAPVRYKERHGGYTKIKLLPKSRKGDASRMAMLELL 166
>UNIPROTKB|Q3T0L3 [details] [associations]
symbol:MRPL17 "39S ribosomal protein L17, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0203 HOGENOM:HOG000019780 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059 PDB:2FTC
PDBsum:2FTC EMBL:BC102348 IPI:IPI00708783 RefSeq:NP_001029446.1
UniGene:Bt.49032 ProteinModelPortal:Q3T0L3 SMR:Q3T0L3 STRING:Q3T0L3
PRIDE:Q3T0L3 Ensembl:ENSBTAT00000034505 GeneID:506988
KEGG:bta:506988 CTD:63875 GeneTree:ENSGT00390000010698
HOVERGEN:HBG056029 InParanoid:Q3T0L3 OMA:DEVRFYA OrthoDB:EOG41C6XH
EvolutionaryTrace:Q3T0L3 NextBio:20867842 Uniprot:Q3T0L3
Length = 172
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AAR 61
+R+L R+ +L+ +++ LV+HERIE + A+ E+R A+ ++ GK G A R
Sbjct: 15 YRRLGLGPESRIHLLQNLLTGLVRHERIEASWARVDELRGYAEKLIDYGKLGDTNERAMR 74
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIR-VGDAAPMAYIEF 112
A ++ D+I KLF LA RY+ + GGYTR+L+ R D A MA IE+
Sbjct: 75 MADFWLTEKDLIPKLFQVLAPRYQGQNGGYTRMLQIPNRNQQDRAKMAVIEY 126
>UNIPROTKB|F1RMQ4 [details] [associations]
symbol:MRPL17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000456 Pfam:PF01196 GO:GO:0005743
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059 CTD:63875
GeneTree:ENSGT00390000010698 OMA:DEVRFYA EMBL:FP565445
RefSeq:NP_001231309.1 UniGene:Ssc.43194 Ensembl:ENSSSCT00000026864
GeneID:100512482 KEGG:ssc:100512482 Uniprot:F1RMQ4
Length = 169
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AAR 61
FR+L R+ +L+ +++ LV+HERIE + A+ E+R A+ ++ GK G A R
Sbjct: 15 FRRLGLGPESRIHLLQNLLTGLVRHERIEASWARVDELRGYAEKLIDYGKLGDTNERAMR 74
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIR-VGDAAPMAYIEF 112
A ++ D+I KLF LA R++ + GGYTR+L+ R D A MA IE+
Sbjct: 75 MADFWLTEKDLIPKLFQVLAPRFQGQNGGYTRMLQIPNRNEQDRAKMAVIEY 126
>RGD|70943 [details] [associations]
symbol:Mrpl17 "mitochondrial ribosomal protein L17" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR000456 Pfam:PF01196 PROSITE:PS01167 RGD:70943
GO:GO:0005743 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0203 HOGENOM:HOG000019780 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059 CTD:63875
GeneTree:ENSGT00390000010698 HOVERGEN:HBG056029 OMA:DEVRFYA
OrthoDB:EOG41C6XH EMBL:BC058447 EMBL:U53512 IPI:IPI00189035
RefSeq:NP_598223.1 UniGene:Rn.40354 ProteinModelPortal:Q6PDW6
SMR:Q6PDW6 STRING:Q6PDW6 PRIDE:Q6PDW6 Ensembl:ENSRNOT00000050562
GeneID:171061 KEGG:rno:171061 UCSC:RGD:70943 InParanoid:Q6PDW6
NextBio:621641 Genevestigator:Q6PDW6 GermOnline:ENSRNOG00000019497
Uniprot:Q6PDW6
Length = 176
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 43/112 (38%), Positives = 65/112 (58%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AAR 61
+R+L R+ +LR +++ LV+HERIE T A+ E+R A+ ++ GK G A R
Sbjct: 15 YRRLGLGPESRIHLLRNLLTGLVRHERIEATWARVDEMRGYAEKLIDYGKLGDTNERAMR 74
Query: 62 RAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVG-DAAPMAYIEF 112
A ++ D+I KLF LA R++ + G YTR+L+ R D A MA IE+
Sbjct: 75 MADFWLTEKDLIPKLFKVLAPRFQGQNGNYTRMLQIPNRKEQDRAKMAVIEY 126
>ZFIN|ZDB-GENE-040912-133 [details] [associations]
symbol:mrpl17 "mitochondrial ribosomal protein L17"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000456 Pfam:PF01196 ZFIN:ZDB-GENE-040912-133
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0203
HOGENOM:HOG000019780 Gene3D:3.90.1030.10 PANTHER:PTHR14413
SUPFAM:SSF64263 TIGRFAMs:TIGR00059 CTD:63875
GeneTree:ENSGT00390000010698 HOVERGEN:HBG056029 OMA:DEVRFYA
OrthoDB:EOG41C6XH EMBL:FP102797 EMBL:BC081486 IPI:IPI00493770
RefSeq:NP_001004683.1 UniGene:Dr.85603 SMR:Q66I81 STRING:Q66I81
Ensembl:ENSDART00000113534 Ensembl:ENSDART00000149905 GeneID:447945
KEGG:dre:447945 NextBio:20832462 Uniprot:Q66I81
Length = 166
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 41/111 (36%), Positives = 65/111 (58%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLC--AARR 62
RK+ R+++LR +++ LV+HERIET A+A EVR A+ ++ K+G A +
Sbjct: 16 RKMGLGPESRINILRNLLTGLVRHERIETGKARADEVRFYAEKLIDYAKKGDTDEKAMKM 75
Query: 63 AAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVG-DAAPMAYIEF 112
A ++ D+I KLF LA R++++ GYT + R R D A MA +E+
Sbjct: 76 ADFWLTEKDLIPKLFKVLAVRFENQTAGYTNMARLPNRENLDRAAMAVLEY 126
>CGD|CAL0005986 [details] [associations]
symbol:MRPL8 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0000002
"mitochondrial genome maintenance" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000456 Pfam:PF01196 CGD:CAL0005986 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000160 EMBL:AACQ01000159
eggNOG:COG0203 HOGENOM:HOG000019780 Gene3D:3.90.1030.10
PANTHER:PTHR14413 SUPFAM:SSF64263 TIGRFAMs:TIGR00059
RefSeq:XP_712336.1 RefSeq:XP_712372.1 ProteinModelPortal:Q59RQ4
STRING:Q59RQ4 GeneID:3646000 GeneID:3646039 KEGG:cal:CaO19.13548
KEGG:cal:CaO19.6129 Uniprot:Q59RQ4
Length = 255
Score = 122 (48.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 34/124 (27%), Positives = 62/124 (50%)
Query: 13 HRMSMLRTMVSQLVKHERIETTVAKAKE----VRRLADNMVQLGKEGSLCAAR------- 61
H+ + + + + L++HE I TT AKAK + + N ++ KE
Sbjct: 14 HKKMIYKNLCANLIRHEYIVTTSAKAKAAQPYIEKFLANTIKQNKELPEAVTNLEDKLKS 73
Query: 62 -RAAAFVRGDDVIH---KLFTELAYRYKDRAGGYTRLLRSRIRVGD-AAPMAYIEFVDRE 116
+A ++++ D + K+ ++ RY R G+TR+++ R+GD APM+ IE VD
Sbjct: 74 IKALSYLQPPDRVECGSKMLEDIINRYPQRTHGFTRVIKLEPRLGDDKAPMSVIELVDSN 133
Query: 117 NELR 120
E++
Sbjct: 134 YEIK 137
>UNIPROTKB|E9PKV2 [details] [associations]
symbol:MRPL17 "39S ribosomal protein L17, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000456
Pfam:PF01196 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC091564 Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263
HGNC:HGNC:14053 IPI:IPI00982310 ProteinModelPortal:E9PKV2
SMR:E9PKV2 Ensembl:ENST00000532203 ArrayExpress:E9PKV2 Bgee:E9PKV2
Uniprot:E9PKV2
Length = 142
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 18 LRTMVSQLVKHERIETTVAKAKEVR-RLADNMVQ-LGKEGSLCAARRAAAFVRG-----D 70
+R V+ + H R+ + E R L N++ L + + A +RG
Sbjct: 1 MRLSVAAAISHGRVFRRMGLGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKEK 60
Query: 71 DVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEF 112
D+I KLF LA RYKD+ GGYTR+L+ R D A MA IE+
Sbjct: 61 DLIPKLFQVLAPRYKDQTGGYTRMLQIPNRSLDRAKMAVIEY 102
>FB|FBgn0035122 [details] [associations]
symbol:mRpL17 "mitochondrial ribosomal protein L17"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] InterPro:IPR000456 Pfam:PF01196 EMBL:AE014296
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 HSSP:Q9Z9H5
Gene3D:3.90.1030.10 PANTHER:PTHR14413 SUPFAM:SSF64263 CTD:63875
GeneTree:ENSGT00390000010698 eggNOG:NOG278728 OMA:DAIRYGD
EMBL:AY119639 EMBL:BT029976 EMBL:BT120114 RefSeq:NP_523870.2
UniGene:Dm.14476 SMR:Q9W0S6 MINT:MINT-977725 STRING:Q9W0S6
EnsemblMetazoa:FBtr0072503 EnsemblMetazoa:FBtr0310415 GeneID:38046
KEGG:dme:Dmel_CG13880 UCSC:CG13880-RA FlyBase:FBgn0035122
InParanoid:Q9W0S6 OrthoDB:EOG4M37RV GenomeRNAi:38046 NextBio:806707
Uniprot:Q9W0S6
Length = 176
Score = 105 (42.0 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLG-KEGSLCAARRA 63
+ ++ P G R+ LR V+ LVKHERIE +A E R A+ ++ + G A
Sbjct: 25 KNVDGPEG-RLLKLRKTVTALVKHERIELFYNRADEARGYAELLISNAIRHGDRHQATME 83
Query: 64 AA--FVRGDDVIHKLFTELAYRYKDRAGGYTRLLRS 97
A ++ ++HKLF L RY+ YTR+ ++
Sbjct: 84 LADYWLLEKQLVHKLFKVLVPRYETYNVSYTRMYKA 119
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.132 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 160 160 0.00097 106 3 11 22 0.48 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 575 (61 KB)
Total size of DFA: 128 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.88u 0.12s 19.00t Elapsed: 00:00:00
Total cpu time: 18.88u 0.12s 19.00t Elapsed: 00:00:01
Start: Sat May 11 01:59:16 2013 End: Sat May 11 01:59:17 2013