BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031427
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q749B4|RL17_GEOSL 50S ribosomal protein L17 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplQ PE=3 SV=1
Length = 175
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ L HERI TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSLFAHERITTTDAKAKELRSIAEKMITLGKRGDLHAVRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR--ENELRQS 122
+++R V+ KLF+ +A RYK+R GGYTR+++ IR GD AP++ IE V+ E ++++S
Sbjct: 68 SYIRDKKVVTKLFSTIAPRYKERDGGYTRIIKLGIRPGDCAPLSVIELVEEQFEKKVKKS 127
Query: 123 KPAVP 127
KP P
Sbjct: 128 KPTAP 132
>sp|A0L5Z9|RL17_MAGSM 50S ribosomal protein L17 OS=Magnetococcus sp. (strain MC-1)
GN=rplQ PE=3 SV=1
Length = 126
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L+R T HR +M++ M+ L KHERIETTV +AKE+R +A+ ++ LGK G L A R+A
Sbjct: 8 RRLSRDTSHRQAMIKNMLVSLFKHERIETTVPRAKELRPVAEKVITLGKRGDLHARRQAL 67
Query: 65 AFVRGD-DVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
+ + GD +V+HKLFT+LA R KDR GGYTR+L++R R GD APM++IE V+R+
Sbjct: 68 SILNGDKEVVHKLFTDLAERNKDRQGGYTRILKTRFRYGDCAPMSFIELVERD 120
>sp|B3E858|RL17_GEOLS 50S ribosomal protein L17 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rplQ PE=3 SV=1
Length = 124
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 82/110 (74%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ L+ HERI TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSLLNHERIVTTDAKAKEIRSVAEKMITLGKRGDLHAHRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 114
A++R V+ KLF+ +A RYKDRAGGYTR+++ R+GDAA ++ IE V+
Sbjct: 68 AYIREKSVVTKLFSTIAPRYKDRAGGYTRIIKLGQRLGDAASLSVIELVE 117
>sp|A1ALW8|RL17_PELPD 50S ribosomal protein L17 OS=Pelobacter propionicus (strain DSM
2379) GN=rplQ PE=3 SV=1
Length = 127
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 80/112 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR +M R MV+ L HE+I TT AKAKE+R +A+ M+ LGK G L + R AA
Sbjct: 8 RRLGRKTSHREAMFRNMVTSLFAHEKITTTDAKAKEIRSVAEKMITLGKRGDLHSTRIAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
AF+R V+ KLF+ +A RYK+RAGGYTR+++ R GDAAPM+ IE V+ E
Sbjct: 68 AFIREKSVVTKLFSTIAPRYKERAGGYTRIIKVGSRNGDAAPMSIIELVEEE 119
>sp|Q250K3|RL17_DESHY 50S ribosomal protein L17 OS=Desulfitobacterium hafniense (strain
Y51) GN=rplQ PE=3 SV=1
Length = 112
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 79/110 (71%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R TGHR SMLR + + L+KHERI+TT A+AKEV +A+ M+ LGK+G L A R A
Sbjct: 3 YRKLGRNTGHRGSMLRNLATSLLKHERIQTTEARAKEVNAIAEKMITLGKQGDLAARRNA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
++ +DV+ KLFTE+A +Y DR GGYTR+++ R GDAA M IE V
Sbjct: 63 LTYLLEEDVVTKLFTEIAPKYADRQGGYTRVIKVGPRRGDAAEMVLIELV 112
>sp|B8G1Z5|RL17_DESHD 50S ribosomal protein L17 OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=rplQ PE=3 SV=1
Length = 112
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 79/110 (71%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R TGHR SMLR + + L+KHERI+TT A+AKEV +A+ M+ LGK+G L A R A
Sbjct: 3 YRKLGRNTGHRGSMLRNLATSLLKHERIQTTEARAKEVNAIAEKMITLGKQGDLAARRNA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
++ +DV+ KLFTE+A +Y DR GGYTR+++ R GDAA M IE V
Sbjct: 63 LTYLLEEDVVTKLFTEIAPKYADRQGGYTRVIKVGPRRGDAAEMVLIELV 112
>sp|B6IRT1|RL17_RHOCS 50S ribosomal protein L17 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplQ PE=3 SV=1
Length = 139
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 80/114 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RK NR T HR++M M + L+KHE+I+TT+ KAK++R + + ++ LGK+G L R A
Sbjct: 8 RKFNRTTSHRLAMFSNMANALIKHEQIKTTLPKAKDLRPIVERLITLGKKGGLANKRLAY 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENE 118
A +R D++ KLFT LA RYK R GGYTR+L++ R GDAAPM IE VDR+ E
Sbjct: 68 AELRDHDMVEKLFTTLAERYKGRPGGYTRVLKAGFRYGDAAPMGVIELVDRDPE 121
>sp|Q39XX8|RL17_GEOMG 50S ribosomal protein L17 OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=rplQ PE=3 SV=1
Length = 178
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 82/112 (73%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ ++HERI TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSFLEHERITTTDAKAKELRSIAEKMITLGKRGDLHAQRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
+++R V+ KLF+ +A RYK+R GGYTR+++ IR GD AP++ IE V+ +
Sbjct: 68 SYIRDKKVVTKLFSTIAPRYKERDGGYTRIIKLGIRPGDNAPLSVIELVEEQ 119
>sp|A0LIL8|RL17_SYNFM 50S ribosomal protein L17 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplQ PE=3 SV=1
Length = 151
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 77/109 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR T HR++M R MV+ L++HERI TT+ KAKE+RR AD M+ LGK G L A R+
Sbjct: 8 RKLNRATSHRLAMFRNMVTSLLQHERIFTTLPKAKELRRWADWMISLGKRGDLHARRQVM 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
A VR + + K+F EL RY+ R GGYTR++++ R GDA+PM IE +
Sbjct: 68 ACVREKETVQKIFAELGPRYQSRPGGYTRIVKAGYRRGDASPMCLIELI 116
>sp|C6E4M9|RL17_GEOSM 50S ribosomal protein L17 OS=Geobacter sp. (strain M21) GN=rplQ
PE=3 SV=1
Length = 168
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 81/110 (73%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+L R T HR++M R MV+ ++HE+I TT AKAKE+R +A+ M+ LGK G L A R+AA
Sbjct: 8 RRLGRTTSHRIAMFRNMVTSFLQHEKITTTDAKAKELRSIAEKMITLGKRGDLHATRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 114
A++R V+ KLFTE+A RY +R GGYTR+++ IR GD AP++ +E V+
Sbjct: 68 AYIRDKKVVTKLFTEIAPRYTERPGGYTRIIKLGIRPGDNAPVSVLELVE 117
>sp|A5GAU7|RL17_GEOUR 50S ribosomal protein L17 OS=Geobacter uraniireducens (strain Rf4)
GN=rplQ PE=3 SV=1
Length = 184
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 81/112 (72%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
++L R T HR++M R MV+ + HERI TT KAKE+R +A+ M+ LGK+G L A R+AA
Sbjct: 8 KRLGRTTSHRIAMYRNMVTSFLNHERITTTDVKAKELRSIAEKMITLGKKGDLHAMRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
+++R V+ KLFT +A RY +RAGGYTR+++ IR GD AP++ IE V+ E
Sbjct: 68 SYIRDKKVVTKLFTAIAPRYAERAGGYTRIIKLGIRPGDNAPLSVIELVEEE 119
>sp|Q2RQY5|RL17_RHORT 50S ribosomal protein L17 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rplQ PE=3 SV=1
Length = 140
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 81/112 (72%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR + HR +M M + L+KHE+I+TT+ KAK++R +A+ ++ LGK G+L R+A
Sbjct: 8 RKLNRTSSHRKAMFANMAASLLKHEQIKTTLPKAKDLRPIAEKLITLGKGGTLHDRRQAH 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
A +R D V+ KLF L RYKDR GGY+R+L++ R GDAAPMA IE VDR+
Sbjct: 68 AILRDDAVVAKLFAVLGPRYKDRQGGYSRILKAGFRYGDAAPMAVIELVDRD 119
>sp|B9M6F1|RL17_GEOSF 50S ribosomal protein L17 OS=Geobacter sp. (strain FRC-32) GN=rplQ
PE=3 SV=1
Length = 181
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 80/110 (72%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
++L R T HR++M R MV+ + HERI TT AKAK +R +A+ M+ LGK+G L A R+AA
Sbjct: 8 KRLGRTTSHRIAMYRNMVTSFLNHERITTTDAKAKGLRSIAEKMITLGKKGDLNAMRQAA 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 114
+F+R V+ KLFT +A RY +RAGGYTR+++ IR GD AP++ IE V+
Sbjct: 68 SFIRDKKVVTKLFTTIAPRYAERAGGYTRIIKLGIRPGDNAPLSVIELVE 117
>sp|B6JEX2|RL17_OLICO 50S ribosomal protein L17 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplQ PE=3 SV=1
Length = 139
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMAASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA IEFVDR+
Sbjct: 68 SELRDHDQVKKLFDALAARYKDRQGGYTRIIKAGFRYGDNAPMAVIEFVDRD 119
>sp|A1REE0|RL17_SHESW 50S ribosomal protein L17 OS=Shewanella sp. (strain W3-18-1)
GN=rplQ PE=3 SV=1
Length = 131
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A4YBV7|RL17_SHEPC 50S ribosomal protein L17 OS=Shewanella putrefaciens (strain CN-32
/ ATCC BAA-453) GN=rplQ PE=3 SV=1
Length = 131
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q8EK46|RL17_SHEON 50S ribosomal protein L17 OS=Shewanella oneidensis (strain MR-1)
GN=rplQ PE=3 SV=1
Length = 131
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q0I079|RL17_SHESR 50S ribosomal protein L17 OS=Shewanella sp. (strain MR-7) GN=rplQ
PE=3 SV=1
Length = 131
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q0HNR1|RL17_SHESM 50S ribosomal protein L17 OS=Shewanella sp. (strain MR-4) GN=rplQ
PE=3 SV=1
Length = 131
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A0KRQ0|RL17_SHESA 50S ribosomal protein L17 OS=Shewanella sp. (strain ANA-3) GN=rplQ
PE=3 SV=1
Length = 131
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|B0TC86|RL17_HELMI 50S ribosomal protein L17 OS=Heliobacterium modesticaldum (strain
ATCC 51547 / Ice1) GN=rplQ PE=3 SV=1
Length = 112
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 79/110 (71%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RK +RPT HR ++LR + + L+KH +I TT KAKE+RR+AD M+ LGK+G L A R+A
Sbjct: 3 YRKFSRPTNHRRALLRNITTSLLKHGKIVTTEPKAKELRRIADKMITLGKQGDLHARRQA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
AF++ + V+ LF E+A +Y R GGYTR+L++ R GDAAPM +E V
Sbjct: 63 LAFIQEESVVTHLFKEIAPKYATRQGGYTRVLKAGFRRGDAAPMCIVELV 112
>sp|B1KM34|RL17_SHEWM 50S ribosomal protein L17 OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=rplQ PE=3 SV=1
Length = 132
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|Q3SSU1|RL17_NITWN 50S ribosomal protein L17 OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=rplQ PE=3 SV=1
Length = 138
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 79/114 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMSASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLAKRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENE 118
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA IEFVDR+ E
Sbjct: 68 SEMRDIDQVKKLFDVLAPRYKDRHGGYTRIIKAGFRYGDNAPMAVIEFVDRDVE 121
>sp|Q1H4L1|RL17_METFK 50S ribosomal protein L17 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rplQ PE=3 SV=1
Length = 131
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 79/111 (71%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR + HR +MLR M + L++HE I+TT+ KAKE+RR+A+ ++ LGK+ +L R A
Sbjct: 8 RKLNRTSSHRQAMLRNMANSLLRHEIIKTTLPKAKELRRVAEPLITLGKDATLANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
+ +R D++ KLF EL RY+ R GGY R+L+ RVGD APMA +E VDR
Sbjct: 68 SRLRDRDIVGKLFNELGPRYQTRNGGYLRILKCGFRVGDNAPMALVELVDR 118
>sp|Q9S0Q7|RL17_SHEVD 50S ribosomal protein L17 OS=Shewanella violacea (strain JCM 10179
/ CIP 106290 / LMG 19151 / DSS12) GN=rplQ PE=3 SV=1
Length = 131
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|A3Q9A8|RL17_SHELP 50S ribosomal protein L17 OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=rplQ PE=3 SV=1
Length = 130
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|A9KWC7|RL17_SHEB9 50S ribosomal protein L17 OS=Shewanella baltica (strain OS195)
GN=rplQ PE=3 SV=1
Length = 131
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A6WHV4|RL17_SHEB8 50S ribosomal protein L17 OS=Shewanella baltica (strain OS185)
GN=rplQ PE=3 SV=1
Length = 131
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A3DA46|RL17_SHEB5 50S ribosomal protein L17 OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=rplQ PE=3 SV=1
Length = 131
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|B8EBH9|RL17_SHEB2 50S ribosomal protein L17 OS=Shewanella baltica (strain OS223)
GN=rplQ PE=3 SV=1
Length = 131
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|B0TLY7|RL17_SHEHH 50S ribosomal protein L17 OS=Shewanella halifaxensis (strain
HAW-EB4) GN=rplQ PE=3 SV=1
Length = 130
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLFTEL R++DR GGYTR+L+ +R GD APMAYIE V R
Sbjct: 68 ARTRDAEVVGKLFTELGPRFQDRPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|A1W334|RL17_ACISJ 50S ribosomal protein L17 OS=Acidovorax sp. (strain JS42) GN=rplQ
PE=3 SV=1
Length = 129
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 79/112 (70%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
RKLNR + HR++ML+ M++ L++HE I+TT+ KAKE+RR+ + M+ L KE S+ R A
Sbjct: 7 LRKLNRTSSHRLAMLQNMMNSLIEHEAIKTTLPKAKELRRVIEPMITLAKEDSVANRRLA 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
+R D + KLF +L R+K R GGYTR+L+ RVGD APMAY+E VDR
Sbjct: 67 FNRLRDRDSVTKLFNDLGPRFKTRPGGYTRILKMGFRVGDNAPMAYVELVDR 118
>sp|B9MBW3|RL17_ACIET 50S ribosomal protein L17 OS=Acidovorax ebreus (strain TPSY)
GN=rplQ PE=3 SV=1
Length = 129
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 79/112 (70%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
RKLNR + HR++ML+ M++ L++HE I+TT+ KAKE+RR+ + M+ L KE S+ R A
Sbjct: 7 LRKLNRTSSHRLAMLQNMMNSLIEHEAIKTTLPKAKELRRVIEPMITLAKEDSVANRRLA 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
+R D + KLF +L R+K R GGYTR+L+ RVGD APMAY+E VDR
Sbjct: 67 FNRLRDRDSVTKLFNDLGPRFKTRPGGYTRILKMGFRVGDNAPMAYVELVDR 118
>sp|Q1QN05|RL17_NITHX 50S ribosomal protein L17 OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=rplQ PE=3 SV=1
Length = 138
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMAASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLDKRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA IEFVDR+
Sbjct: 68 SEMRDIDQVKKLFAVLAPRYKDRQGGYTRIIKAGFRYGDNAPMAVIEFVDRD 119
>sp|A8G1C4|RL17_SHESH 50S ribosomal protein L17 OS=Shewanella sediminis (strain HAW-EB3)
GN=rplQ PE=3 SV=1
Length = 132
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R +V+ KLF EL RY++R GGYTR+L+ +R GD APMA+IE V R
Sbjct: 68 ARTRDAEVVGKLFNELGPRYQERPGGYTRILKCGLRTGDKAPMAFIELVGR 118
>sp|Q2S938|RL17_HAHCH 50S ribosomal protein L17 OS=Hahella chejuensis (strain KCTC 2396)
GN=rplQ PE=3 SV=1
Length = 129
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 77/111 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RK NR + HR SM R M + LV+HE I+TTV KAKE+RR+A+ ++ L K S+ R A
Sbjct: 8 RKFNRTSAHRKSMFRNMAASLVEHELIKTTVPKAKELRRVAEPLITLAKSDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
+ +R D + KLF E+ RYKDR GGY R+L+ +R GD+APMA++E VDR
Sbjct: 68 SRLRSRDAVTKLFEEIGPRYKDRPGGYLRILKCGLRPGDSAPMAFVELVDR 118
>sp|C6DFS2|RL17_PECCP 50S ribosomal protein L17 OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=rplQ PE=3 SV=1
Length = 130
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDR 118
>sp|Q6CZZ6|RL17_ERWCT 50S ribosomal protein L17 OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=rplQ PE=3 SV=1
Length = 130
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDR 118
>sp|A5FZU0|RL17_ACICJ 50S ribosomal protein L17 OS=Acidiphilium cryptum (strain JF-5)
GN=rplQ PE=3 SV=1
Length = 146
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKL HR +M R M L+KHE+I TT+ KAKE+R +A+ ++ LGK G L A R+A
Sbjct: 8 RKLGVTASHRAAMFRNMAVALLKHEQITTTLPKAKELRPVAEKLITLGKRGGLHARRQAH 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
A +R D ++ KLF LA RYK+R GGYTR+L++ +R GDAA MA IE VDR+
Sbjct: 68 ALLRDDVIVAKLFDSLADRYKERQGGYTRVLKAGMRYGDAADMAVIELVDRD 119
>sp|Q134V4|RL17_RHOPS 50S ribosomal protein L17 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplQ PE=3 SV=1
Length = 136
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMCAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLDKRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELRQSKP 124
+ +R D + KLF LA RYKDR GGYTR++++ R GD APMA IEFVDR+ + + K
Sbjct: 68 SEMRDLDQVRKLFGVLAPRYKDRNGGYTRIIKAGFRYGDNAPMAVIEFVDRDEDAK-GKD 126
Query: 125 AVPQPPPRAA 134
+ P AA
Sbjct: 127 SGPTQESEAA 136
>sp|Q8ETV8|RL17_OCEIH 50S ribosomal protein L17 OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=rplQ PE=3
SV=1
Length = 117
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 78/115 (67%), Gaps = 6/115 (5%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKL R T RM++LR + S L+ HERIETT AKAKE+R + + M+ LGK G L A R+AA
Sbjct: 3 RKLGRKTDSRMALLRNLASDLIIHERIETTEAKAKELRSIVEKMITLGKRGDLHARRQAA 62
Query: 65 AFV------RGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
AF+ ++VI KLF ++A RY+DR GGYTR+L+ R GD A MA IE V
Sbjct: 63 AFLYNKETDEDNNVIQKLFDDVAARYEDRQGGYTRVLKLNERQGDGAKMAIIELV 117
>sp|Q0AUL0|RL17_SYNWW 50S ribosomal protein L17 OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=rplQ PE=3 SV=1
Length = 113
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 80/111 (72%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+R+L + HR S+LR V+ L+K E+I TT +AKE++RL + M+ LGK G L A R+A
Sbjct: 3 YRRLGLRSDHRRSVLRNSVTSLLKEEKISTTETRAKEIKRLTEKMITLGKRGDLHARRQA 62
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 114
AA++ D+V+ KLF+++A RY++R GGYTRL+++ R GD APM IE V+
Sbjct: 63 AAYIMSDEVVQKLFSDIAARYEERNGGYTRLVKTGYRKGDGAPMVMIELVE 113
>sp|Q8RE45|RL17_FUSNN 50S ribosomal protein L17 OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=rplQ PE=3 SV=1
Length = 116
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 79/110 (71%)
Query: 4 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRA 63
+RKL R HR +ML+ M L+K ERIETTV +AKE+R+ A+ M+ GK+ +L + R A
Sbjct: 7 YRKLGRRADHRKAMLKNMTISLIKAERIETTVTRAKELRKFAERMITFGKKNTLASRRNA 66
Query: 64 AAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 113
AF+R ++V+ K+F E+A +Y +R GGYTR++++ +R GD+A MA IE V
Sbjct: 67 FAFLRDEEVVAKIFNEIAPKYAERNGGYTRIIKTSVRKGDSAEMAIIELV 116
>sp|A4SSY0|RL17_AERS4 50S ribosomal protein L17 OS=Aeromonas salmonicida (strain A449)
GN=rplQ PE=3 SV=1
Length = 127
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 76/111 (68%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R + ++ KLF EL RY +RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNAIVAKLFNELGPRYLERAGGYTRILKCGFRAGDNAPMAYIELVDR 118
>sp|A0KF46|RL17_AERHH 50S ribosomal protein L17 OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=rplQ PE=3 SV=1
Length = 127
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 76/111 (68%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R + ++ KLF EL RY +RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNAIVAKLFNELGPRYLERAGGYTRILKCGFRAGDNAPMAYIELVDR 118
>sp|Q5FU08|RL17_GLUOX 50S ribosomal protein L17 OS=Gluconobacter oxydans (strain 621H)
GN=rplQ PE=3 SV=1
Length = 140
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 79/112 (70%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLN + HR +M R M L+KHE+I TT+ KAKE+R + + ++ LGK G L A R+A
Sbjct: 8 RKLNVTSSHRAAMFRNMAVALIKHEQITTTLPKAKELRPVVEKLITLGKRGDLHARRQAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 116
A +R D V+ KLF+ +A RYK RAGGY+R+L++ +R GD A MA IE VDR+
Sbjct: 68 AQLRDDAVVTKLFSAVAERYKGRAGGYSRVLKAGVRYGDNADMAVIELVDRD 119
>sp|Q65QY1|RL17_MANSM 50S ribosomal protein L17 OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=rplQ PE=3 SV=1
Length = 127
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 74/111 (66%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M R M S LV HE I+TT+ KAKE+RR+ + ++ L KE S+ R A
Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVSHEIIKTTLPKAKELRRVVEPLITLAKEDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R + + KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRNIETVAKLFNELGPRFAQRAGGYTRILKCGFRAGDNAPMAYIELVDR 118
>sp|B5FGE2|RL17_VIBFM 50S ribosomal protein L17 OS=Vibrio fischeri (strain MJ11) GN=rplQ
PE=3 SV=1
Length = 126
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 76/111 (68%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRKAMFSNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R ++V+ KLFTEL R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNEVVAKLFTELGPRFAQRAGGYTRILKCGFRAGDKAPMAYIELVDR 118
>sp|Q5E888|RL17_VIBF1 50S ribosomal protein L17 OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=rplQ PE=3 SV=1
Length = 126
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 76/111 (68%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
R+LNR + HR +M M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A
Sbjct: 8 RQLNRNSSHRKAMFSNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAF 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 115
A R ++V+ KLFTEL R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 68 ARTRDNEVVAKLFTELGPRFAQRAGGYTRILKCGFRAGDKAPMAYIELVDR 118
>sp|A4YSL7|RL17_BRASO 50S ribosomal protein L17 OS=Bradyrhizobium sp. (strain ORS278)
GN=rplQ PE=3 SV=1
Length = 137
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 82/130 (63%)
Query: 5 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAA 64
RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A
Sbjct: 8 RKLNRTAEHRKAMFANMCASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAI 67
Query: 65 AFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELRQSKP 124
A +R D + KLF LA RYKDR GGYTR++++ R GD A MA IEFVDR+ + +
Sbjct: 68 AEMRDVDQVKKLFDVLAPRYKDRNGGYTRIIKAGFRYGDNAAMAVIEFVDRDVDAKGQDS 127
Query: 125 AVPQPPPRAA 134
Q AA
Sbjct: 128 GPVQETSEAA 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,791,320
Number of Sequences: 539616
Number of extensions: 2089883
Number of successful extensions: 7822
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6803
Number of HSP's gapped (non-prelim): 815
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)