Citrus Sinensis ID: 031430

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MKRDREMAAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNLMPTGDDLKLWVA
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHccccccccccEEEEcccccccccHHHccccccccccccccccccccccccccccccccccccccEEccccccEcccccccccccHHcccccccccccccccccccccccccccccccccEEEEEccccccHHHcEEEcc
Coil and Loop (DISEMBL)
MKRDREMAAIDTANCLMLLSKvgetdqgkrVFACKtcnkefpsfqalgghrashkkpklmtmassgedfdqtqmppasprkpkthecsicgLEFAIGQALGGHMRRHRAAAAMGAVAdglvtrpllplpvlkksnsckrvfcldlnlmptgddlklwva
Flexible Loop (DISEMBL)
MKRDREMAAIDTANCLMLLSKVGETDQGKRVFACKTCNKEfpsfqalgghrashKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLpvlkksnsckrvfcldlnlmptgddlklwva
Low Complexity Region (SEG)
MKRDREMAAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQalgghmrrhraaaamgavadglvTRpllplpVLKKSNSCKRVFCLDLNLMPTGDDLKLWVA
Disordered region (IsUnstruct)
*********IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSF*****************************************ECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNLMPTGDDLKLW**
Disordered Region (DISOPRED)
**********DTANCL***************FACKTCNKEFPSFQALGGHRASHKKP******************************SICGLEFAIGQALGGHMRRHRAA*******************************CLDLNLMPTGDDLKLWVA
Disordered Region (DISEMBL)
********AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQA*********KPKLMTMASS********************ECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNLMPTGDDLKLWVA
Disordered Region (DISPRO)
******MAAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQAL***********************************KTHECSICGLEFAIGQAL*************************************KRVFCLDLNLMPTGDDLKLWVA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRDREMAAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNLMPTGDDLKLWVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
Q42410	162	Zinc finger protein ZAT12	yes	no	0.867	0.851	0.537	3e-32
Q9LX85	164	Zinc finger protein ZAT8	no	no	0.899	0.871	0.521	2e-30
Q9SLD4	178	Zinc finger protein ZAT11	no	no	0.918	0.820	0.436	5e-28
Q42453	168	Zinc finger protein ZAT7	no	no	0.836	0.791	0.503	9e-27
Q681X4	286	Zinc finger protein ZAT5	no	no	0.861	0.479	0.353	6e-22
Q9M202	288	Zinc finger protein ZAT9	no	no	0.465	0.256	0.473	1e-12
O22533	238	Zinc finger protein ZAT6	no	no	0.654	0.436	0.348	3e-12
Q9SSW0	193	Zinc finger protein AZF3	no	no	0.534	0.440	0.44	4e-12
Q39092	267	Zinc finger protein ZAT1	no	no	0.603	0.359	0.398	4e-12
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.691	0.350	0.419	5e-12

>sp|Q42410|ZAT12_ARATH Zinc finger protein ZAT12 OS=Arabidopsis thaliana GN=ZAT12 PE=2 SV=1

 Score =  137 bits (345), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/158 (53%), Positives = 98/158 (62%), Gaps = 20/158 (12%)

Query: 10  IDTANCLMLLSKVGE--TDQG--KRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS 65
           +  ANCLMLLS+VG+   D G  KRVF CKTC K+F SFQALGGHRASHKKP        
Sbjct: 13  VTAANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKP-------- 64

Query: 66  GEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPL 125
             + D          K  +H C ICG+EF +GQALGGHMRRHR  +  GA    LVTR L
Sbjct: 65  --NNDALSSGLMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNES--GAAGGALVTRAL 120

Query: 126 LPLP---VLKKSNSCKRVFCLDLNL-MPTGDDLKLWVA 159
           LP P    LKKS+S KRV CLDL+L M    +LKL + 
Sbjct: 121 LPEPTVTTLKKSSSGKRVACLDLSLGMVDNLNLKLELG 158

Transcriptional repressor involved in light acclimation, cold and oxidative stress responses. May regulate a collection of transcripts involved in response to high-light, cold and oxidative stress.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LX85|ZAT8_ARATH Zinc finger protein ZAT8 OS=Arabidopsis thaliana GN=ZAT8 PE=2 SV=1

 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 102/165 (61%), Gaps = 22/165 (13%)

Query: 3   RDREMAAID--TANCLMLLSKVGETDQG--KRVFACKTCNKEFPSFQALGGHRASHKKPK 58
           R  E+  ++   A CLMLLS+VGE   G  KRVF CKTC KEF SFQALGGHRASHKK  
Sbjct: 4   RSEEVEIVEDTAAKCLMLLSRVGECGGGGEKRVFRCKTCLKEFSSFQALGGHRASHKK-- 61

Query: 59  LMTMASSGEDFDQTQMPPASPRKPKT---HECSICGLEFAIGQALGGHMRRHRAAAAMGA 115
              + SS    D + +   S +K KT   H C ICG+EF +GQALGGHMRRHR+  A   
Sbjct: 62  --LINSS----DPSLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPG 115

Query: 116 VADGLVTRPLLP----LPVLKKSNSCKRVFCLDLNLMPTGDDLKL 156
               LVTR  LP    +  LKKS+S KRV CLDL+ M +  + KL
Sbjct: 116 T---LVTRSFLPETTTVTTLKKSSSGKRVACLDLDSMESLVNWKL 157

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score =  123 bits (308), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 94/172 (54%), Gaps = 26/172 (15%)

Query: 1   MKRDRE-----MAAIDTANCLMLLSKVGETDQ----------GKRVFACKTCNKEFPSFQ 45
           MKR+R      +  ID A CLM+L++     Q              F CKTCNK F SFQ
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ 60

Query: 46  ALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMR 105
           ALGGHRASHKKPKL       E  D   +     +    H+CSIC   F  GQALGGHMR
Sbjct: 61  ALGGHRASHKKPKLTV-----EQKDVKHL-SNDYKGNHFHKCSICSQSFGTGQALGGHMR 114

Query: 106 RHRAAAAMGAVADGLVTRPLLP-LPVLKKSNSCKRVFCLDLNLMPTGDDLKL 156
           RHR++     V    ++ P++P +PVLK+  S KR+  LDLNL P  +DL+ 
Sbjct: 115 RHRSSM---TVEPSFIS-PMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEY 162

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42453|ZAT7_ARATH Zinc finger protein ZAT7 OS=Arabidopsis thaliana GN=ZAT7 PE=2 SV=1

 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/157 (50%), Positives = 97/157 (61%), Gaps = 24/157 (15%)

Query: 3   RDREMAAID---TANCLMLLSKVGETDQ----GKRVFACKTCNKEFPSFQALGGHRASHK 55
           R  E+  ++   TA CLMLLS+VGE        +RVF CKTC KEF SFQALGGHRASHK
Sbjct: 4   RSEEIVIVEEDTTAKCLMLLSRVGECGGGCGGDERVFRCKTCLKEFSSFQALGGHRASHK 63

Query: 56  KPKLMTMASSGEDFDQTQMPPASPRKPKT-HECSICGLEFAIGQALGGHMRRHRAAAAMG 114
           K     + +S    + + +   S +K KT H C ICG++F +GQALGGHMRRHR     G
Sbjct: 64  K-----LINSD---NPSLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSG 115

Query: 115 AVADGLVTRPLLP----LPVLKKSNSCKRVFCLDLNL 147
           +    LVTR  LP    +  LKK +S KRV CLDL+L
Sbjct: 116 S----LVTRSFLPETTTVTALKKFSSGKRVACLDLDL 148

Probable transcription factor involved in oxidative stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score =  103 bits (256), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 83/181 (45%), Gaps = 44/181 (24%)

Query: 11  DTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFD 70
           D  N   +  K+   +    V+ CKTCN+ F SFQALGGHRASHKKP+  T        +
Sbjct: 94  DLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTSTE-------E 146

Query: 71  QTQMPPASPRKP-----------------------------KTHECSICGLEFAIGQALG 101
           +T++P   P+                               K HECSICG EF  GQALG
Sbjct: 147 KTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVHECSICGSEFTSGQALG 206

Query: 102 GHMRRHRAA-------AAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNLMPTGDDL 154
           GHMRRHR A       AA   V+    T   + + + +     ++   LDLNL    DDL
Sbjct: 207 GHMRRHRTAVTTISPVAATAEVSRN-STEEEIEINIGRSMEQQRKYLPLDLNLPAPEDDL 265

Query: 155 K 155
           +
Sbjct: 266 R 266

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 2/76 (2%)

Query: 32  FACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICG 91
           + C+TC K F S+QALGGHRASHKK ++    +  E   +T+         + HEC IC 
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKT--EQRSETEYDNVVVVAKRIHECPICL 230

Query: 92  LEFAIGQALGGHMRRH 107
             FA GQALGGH R H
Sbjct: 231 RVFASGQALGGHKRSH 246

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|O22533|ZAT6_ARATH Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 25/129 (19%)

Query: 4   DREMAAID--TANCLMLLSKVGETDQGKR-----------------VFACKTCNKEFPSF 44
           DR+    D   A CLMLL++ G+ ++                    ++ C  C+K F S+
Sbjct: 42  DRQSLTEDEYIALCLMLLARDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSY 101

Query: 45  QALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKP------KTHECSICGLEFAIGQ 98
           QALGGH+ASH+K   +T ++ G++   +     S          K+H CSIC   FA GQ
Sbjct: 102 QALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQ 161

Query: 99  ALGGHMRRH 107
           ALGGH R H
Sbjct: 162 ALGGHKRCH 170

Probable transcription factor that regulates root development and phosphate (Pi) acquisition and homeostasis. Probably acts as a repressor of primary root growth and regulates Pi homeostasis through the control of root architecture.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW0|AZF3_ARATH Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 15/100 (15%)

Query: 13  ANCLMLLSKVGE-----TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGE 67
           A CLMLL++ G      T   K  + C  C K F S+QALGGH+ASH+     ++   GE
Sbjct: 51  AFCLMLLARDGGDLDSVTVAEKPSYKCGVCYKTFSSYQALGGHKASHR-----SLYGGGE 105

Query: 68  DFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRH 107
           +   T   P++    K+H CS+CG  FA GQALGGH R H
Sbjct: 106 NDKST---PSTA--VKSHVCSVCGKSFATGQALGGHKRCH 140

Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 30  RVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSI 89
           + F C+TC K F S+QALGGHRASHKK    T     ++  + +    S      HEC I
Sbjct: 158 KWFECETCEKVFKSYQALGGHRASHKKKIAETDQLGSDELKKKKKKSTSSH----HECPI 213

Query: 90  CGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPL---LPLP 129
           C   F  GQALGGH R H +A        G++   +   LP P
Sbjct: 214 CAKVFTSGQALGGHKRSHASANNEFTRRSGIIISLIDLNLPAP 256

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 64/124 (51%), Gaps = 14/124 (11%)

Query: 32  FACKTCNKEFPSFQALGGHRASHKKPKL-MTMASSGEDFDQTQMPPASPRKPKTHECSIC 90
           F C+TC K F S+QALGGHRASHKK K  MT     E    T+       K K HEC IC
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVE----TEYVLGVKEK-KVHECPIC 248

Query: 91  GLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNL-MP 149
              F  GQALGGH R H +    G    GL    ++    +++  S K+   +DLNL  P
Sbjct: 249 FRVFTSGQALGGHKRSHGSNIGAGR---GLSVSQIVQ---IEEEVSVKQRM-IDLNLPAP 301

Query: 150 TGDD 153
             +D
Sbjct: 302 NEED 305

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
255584784	159	nucleic acid binding protein, putative [	0.943	0.943	0.658	7e-48
190609631	196	putative Cys2/His2 zinc finger protein [	0.886	0.719	0.536	1e-39
224059528	197	predicted protein [Populus trichocarpa]	0.886	0.715	0.539	2e-39
225449611	176	PREDICTED: zinc finger protein ZAT12-lik	0.943	0.852	0.581	5e-39
224098312	177	predicted protein [Populus trichocarpa]	0.899	0.807	0.552	6e-39
224112835	179	predicted protein [Populus trichocarpa]	0.899	0.798	0.555	8e-39
224106529	188	predicted protein [Populus trichocarpa]	0.893	0.755	0.568	8e-39
302398667	171	C2H2L domain class transcription factor	0.855	0.795	0.604	1e-38
170522968	165	putative cold-inducible protein [Camelli	0.886	0.854	0.577	2e-38
356568969	175	PREDICTED: zinc finger protein ZAT11-lik	0.943	0.857	0.550	8e-38

>gi|255584784|ref|XP_002533110.1| nucleic acid binding protein, putative [Ricinus communis] gi|223527101|gb|EEF29282.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  194 bits (494), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/164 (65%), Positives = 122/164 (74%), Gaps = 14/164 (8%)

Query: 1   MKRDREMAAIDTANCLMLLSKVGETD----QGKRVFACKTCNKEFPSFQALGGHRASHKK 56
           MKRDRE A ID ANCLMLLSKVG+T+    +  R+FACKTCN+ F SFQALGGHRASHKK
Sbjct: 1   MKRDREEAVIDMANCLMLLSKVGQTELEDSKPGRLFACKTCNRRFSSFQALGGHRASHKK 60

Query: 57  PKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV 116
           PKL+     G+D  +    P+SP KPKTHECSICGLEFAIGQALGGHMRRHR        
Sbjct: 61  PKLI-----GDDLLKL---PSSPPKPKTHECSICGLEFAIGQALGGHMRRHRGNTGG-GG 111

Query: 117 ADGLVTRPLLPLPVLKKSNSCKRVFCLDLNLMPTGD-DLKLWVA 159
            DG+VTR LLP+PV+KKSNS KRV CLDLNL P  + DL L + 
Sbjct: 112 GDGVVTRALLPVPVMKKSNSSKRVLCLDLNLTPVENYDLTLQLG 155

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|190609631|emb|CAQ64474.1| putative Cys2/His2 zinc finger protein [Populus tremula x Populus alba]

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/177 (53%), Positives = 108/177 (61%), Gaps = 36/177 (20%)

Query: 1   MKRDREMAAIDTANCLMLLSKVGETDQ--------------------GKRVFACKTCNKE 40
           MKRDRE   +D A CLMLLSKVGE D                       R F+CKTC+K 
Sbjct: 1   MKRDREQVELDLAKCLMLLSKVGEADHEILTSYRPAAAAATAGAGAGAGRSFSCKTCDKN 60

Query: 41  FPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQAL 100
           FPSFQALGGHRASHKKPKLM   S+G         P SP KPKTH+CSICGLEF +GQAL
Sbjct: 61  FPSFQALGGHRASHKKPKLM--ESTGNLLKL----PNSPSKPKTHQCSICGLEFPLGQAL 114

Query: 101 GGHMRRHRAAAAMGAVAD--------GLVTRPLLP--LPVLKKSNSCKRVFCLDLNL 147
           GGHMRRHRA   +   ++         +   P LP  +PVLK+SNS KRV CLDL+L
Sbjct: 115 GGHMRRHRAPNNVDTTSNSSKDHELAAVTQPPFLPEAVPVLKRSNSSKRVLCLDLSL 171

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059528|ref|XP_002299891.1| predicted protein [Populus trichocarpa] gi|222847149|gb|EEE84696.1| predicted protein [Populus trichocarpa]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/178 (53%), Positives = 107/178 (60%), Gaps = 37/178 (20%)

Query: 1   MKRDREMAAIDTANCLMLLSKVGETDQ-----------------------GKRVFACKTC 37
           MKRDRE A ID A CLMLLSKVG+ D                          R F+CKTC
Sbjct: 1   MKRDREQAEIDLAKCLMLLSKVGQADHEILTNYRSAAAAAAAATAGAGAGAGRSFSCKTC 60

Query: 38  NKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIG 97
           NK FPSFQALGGHRASHKKPKL    S+G         P SP KPKTH+CSICGLEF +G
Sbjct: 61  NKNFPSFQALGGHRASHKKPKLK--ESTGNLLKL----PNSPSKPKTHQCSICGLEFPLG 114

Query: 98  QALGGHMRRHRAAAAMGAVAD-------GLVTRPLLP-LPVLKKSNSCKRVFCLDLNL 147
           QALGGHMRRHRA   +   +         +   P LP +PVLK+SNS KRV CLDL+L
Sbjct: 115 QALGGHMRRHRAPNNVDTTSTSSKDHELAVTQPPFLPAVPVLKRSNSSKRVLCLDLSL 172

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449611|ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [Vitis vinifera]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/165 (58%), Positives = 113/165 (68%), Gaps = 15/165 (9%)

Query: 3   RDREMAAIDTANCLMLLSKVGETDQ----GKRVFACKTCNKEFPSFQALGGHRASHKKPK 58
           RD E  ++  ANCLMLLS+  + D       RVF CKTCN++FPSFQALGGHRASHKKP+
Sbjct: 7   RDGEHESVSIANCLMLLSRGTDYDSIARVPSRVFECKTCNRQFPSFQALGGHRASHKKPR 66

Query: 59  LMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVAD 118
           LM +  +G+D  Q Q   +SP KPKTHECSICGLEFAIGQALGGHMRRHRAAA+    A 
Sbjct: 67  LMAL--NGDDPAQLQ---SSPLKPKTHECSICGLEFAIGQALGGHMRRHRAAASGATQAL 121

Query: 119 GLVTRPLLPL----PVLKKSNSCKRVFCLDLNLMPTGD-DLKLWV 158
              T    P     P+LKK NS +RV CLDLNL P  + DL+  +
Sbjct: 122 SETTSSSSPPPPQAPLLKKPNS-RRVLCLDLNLTPLENIDLQFQL 165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098312|ref|XP_002311150.1| predicted protein [Populus trichocarpa] gi|222850970|gb|EEE88517.1| predicted protein [Populus trichocarpa]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/181 (55%), Positives = 117/181 (64%), Gaps = 38/181 (20%)

Query: 1   MKRD---REMAAIDTANCLMLLSKVGET------------DQGKRVFACKTCNKEFPSFQ 45
           MKR    RE+ +I  ANCL+ LSK  E+            +   RVF CKTCN++FPSFQ
Sbjct: 1   MKRSLYAREIDSITMANCLVFLSKGRESYSFPSFDHAINNNSPSRVFECKTCNRKFPSFQ 60

Query: 46  ALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMR 105
           ALGGHRASHKKPKLM     GE   ++Q    SP KPKTHECSICGLEFAIGQALGGHMR
Sbjct: 61  ALGGHRASHKKPKLM----GGEGSFESQ----SPAKPKTHECSICGLEFAIGQALGGHMR 112

Query: 106 RHRAAAA-MGAVADGLVTRPLLP--------LPVLKKSNSCKRVFCLDLNLMPTGDDLKL 156
           RHRAA      +AD     PL P        +PV+KKSNS +RV CLDLNL P  +D++L
Sbjct: 113 RHRAALNDQNQLAD-----PLSPPSSDHKQVVPVVKKSNS-RRVLCLDLNLTPNENDMEL 166

Query: 157 W 157
           +
Sbjct: 167 F 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112835|ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|222865345|gb|EEF02476.1| predicted protein [Populus trichocarpa] gi|355477194|gb|AES12473.1| C2H2-type zinc finger protein 1 [Populus trichocarpa]

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 117/180 (65%), Gaps = 37/180 (20%)

Query: 1   MKR---DREMAAIDTANCLMLLSKVGET------DQG------KRVFACKTCNKEFPSFQ 45
           MKR   +RE+ +I  ANCLM LSK  E+      D         RVF CKTCN++FPSFQ
Sbjct: 1   MKRGLHEREIDSITMANCLMFLSKGRESYSFPSFDHAMSNISPARVFECKTCNRQFPSFQ 60

Query: 46  ALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMR 105
           ALGGHRASHKKP+LM     GE   +TQ    SP KPKTHECSICGLEFAIGQALGGHMR
Sbjct: 61  ALGGHRASHKKPRLM----GGEGSFETQ----SPAKPKTHECSICGLEFAIGQALGGHMR 112

Query: 106 RHRAAAAMGAVADGLVTRPLLP--------LPVLKKSNSCKRVFCLDLNLMPTGDDLKLW 157
           RHRA     A+ D     PL P        +PV+K+SNS +RV CLDLNL P  +D++L+
Sbjct: 113 RHRA-----ALNDRNQVDPLNPPSTDDQKAVPVVKRSNS-RRVLCLDLNLTPYENDMELF 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106529|ref|XP_002314198.1| predicted protein [Populus trichocarpa] gi|222850606|gb|EEE88153.1| predicted protein [Populus trichocarpa]

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/167 (56%), Positives = 106/167 (63%), Gaps = 25/167 (14%)

Query: 1   MKRDREMAAIDTANCLMLLSKVGETDQGK--------------RVFACKTCNKEFPSFQA 46
           MKR RE   +D ANCLMLL KVG+ D  +              R+F+CKTCNK F SFQA
Sbjct: 1   MKRGREEGELDMANCLMLLYKVGKADDHELPTNYKSSSPSGAGRLFSCKTCNKNFSSFQA 60

Query: 47  LGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRR 106
           LGGHRASHKKPKL+     G   +     P SP KPK H+CSICGLEF IGQALGGHMRR
Sbjct: 61  LGGHRASHKKPKLV-----GSTGNLLMKLPNSPPKPKNHQCSICGLEFPIGQALGGHMRR 115

Query: 107 HRAAA--AMGAVADG---LVTRPLLP-LPVLKKSNSCKRVFCLDLNL 147
           HRA    A    AD    +   P LP +PVLKKSNS KRV CLDL+L
Sbjct: 116 HRAGNIDATSNSADNELAVTYPPFLPAIPVLKKSNSSKRVLCLDLSL 162

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398667|gb|ADL36628.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/149 (60%), Positives = 97/149 (65%), Gaps = 13/149 (8%)

Query: 1   MKRDREMAAIDTANCLMLLSKV-------GETDQGKRVFACKTCNKEFPSFQALGGHRAS 53
           MKR RE   +D  NCLMLLS+         E     RVF CKTCN+EFPSFQALGGHRAS
Sbjct: 1   MKRSREDETLDLVNCLMLLSREPDSSPIKHENTNKDRVFVCKTCNREFPSFQALGGHRAS 60

Query: 54  HKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAM 113
           HKKPKLM   ++  D       P SP KPKTHEC ICGLEFAIGQALGGHMRRHR     
Sbjct: 61  HKKPKLMPGGAA--DLLHLAQSPGSPVKPKTHECPICGLEFAIGQALGGHMRRHREVMQA 118

Query: 114 GAVADGLVTRPLLPLPVLKKSNSCKRVFC 142
            AV     T+   P+PVLKKSNS KRV C
Sbjct: 119 AAVR----TQASPPMPVLKKSNSSKRVSC 143

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|170522968|gb|ACB20696.1| putative cold-inducible protein [Camellia sinensis]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/161 (57%), Positives = 111/161 (68%), Gaps = 20/161 (12%)

Query: 2   KRDREMAAIDTANCLMLLSKVGETDQGK---RVFACKTCNKEFPSFQALGGHRASHKKPK 58
           + D E+ A+  ANCLMLLS+VGET   K   RVF CKTCN+EF SFQALGGHRASHKK +
Sbjct: 10  REDTEVEALAMANCLMLLSRVGETTSTKGRDRVFTCKTCNREFSSFQALGGHRASHKKLR 69

Query: 59  LMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVAD 118
           LM     G+   QT   P+SP K KTHECSICGLEFA+GQALGGHMRRHR +++  + A 
Sbjct: 70  LM---GGGDLHVQT---PSSPVKGKTHECSICGLEFAMGQALGGHMRRHRDSSS-PSTAQ 122

Query: 119 GLVTRPLLPLPVLKKSNS---CKRVFCLDLNLMPTGDDLKL 156
            ++       PVLKKSNS    KRV  LDLNL P  + +K+
Sbjct: 123 AVI-------PVLKKSNSSNGSKRVLSLDLNLTPYENHMKI 156

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568969|ref|XP_003552680.1| PREDICTED: zinc finger protein ZAT11-like [Glycine max]

 Score =  161 bits (408), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/167 (55%), Positives = 104/167 (62%), Gaps = 17/167 (10%)

Query: 1   MKRDREMAAIDTANCLMLLSKVGE-------TDQGKRVFACKTCNKEFPSFQALGGHRAS 53
           MKR+RE+ ++  ANCLMLLS+  E       T    RVF CKTCN++FPSFQALGGHRAS
Sbjct: 1   MKREREVDSLTMANCLMLLSRGSEFEATYSSTSMSNRVFECKTCNRQFPSFQALGGHRAS 60

Query: 54  HKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAM 113
           HKKP+LM     G      Q+   SP KPKTHECSICGLEFAIGQALGGHMRRHRAA   
Sbjct: 61  HKKPRLMAGDIEG------QLLHDSPPKPKTHECSICGLEFAIGQALGGHMRRHRAANLN 114

Query: 114 GAVADGLVTRPLLPLPVL----KKSNSCKRVFCLDLNLMPTGDDLKL 156
           G V +   T             KK    KRV  LDLNL P  +DL+ 
Sbjct: 115 GNVHNSTATSSSSGGSSFDSSPKKKADNKRVLVLDLNLTPFENDLEF 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
TAIR|locus:2054548	156	AT2G28710 "AT2G28710" [Arabido	0.899	0.916	0.456	4.6e-25
TAIR|locus:2075276	164	AT3G46080 "AT3G46080" [Arabido	0.918	0.890	0.444	2.4e-21
TAIR|locus:2075261	170	AT3G46070 "AT3G46070" [Arabido	0.849	0.794	0.416	3e-21
TAIR|locus:2168073	162	RHL41 "AT5G59820" [Arabidopsis	0.861	0.845	0.444	1.3e-20
TAIR|locus:2075291	168	ZAT7 "AT3G46090" [Arabidopsis	0.861	0.815	0.411	3.5e-20
TAIR|locus:2142674	292	AT5G03510 "AT5G03510" [Arabido	0.182	0.099	0.827	2.7e-17
TAIR|locus:2179924	362	AT5G04390 "AT5G04390" [Arabido	0.238	0.104	0.657	1.6e-16
TAIR|locus:2049811	178	ZAT11 "AT2G37430" [Arabidopsis	0.918	0.820	0.364	2.3e-16
TAIR|locus:2075865	398	AT3G10470 "AT3G10470" [Arabido	0.314	0.125	0.54	4.3e-16
TAIR|locus:2046153	286	AT2G28200 "AT2G28200" [Arabido	0.496	0.276	0.360	1.7e-15

TAIR|locus:2054548 AT2G28710 "AT2G28710" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 74/162 (45%), Positives = 87/162 (53%)

Query:     1 MKRDR-EMAAIDT-ANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK 58
             M+R R +M  I+  ANCL+LLSK  + D   RVFACKTCNKEFPSFQALGGHRASH++  
Sbjct:     1 MERGRSDMEMINNMANCLILLSKAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRR-- 58

Query:    59 LMTMASSGEDFDQTQMPPASPR-KPKTHECSICGLEFAIGQXXXXXXXXXXXXXXXXXXX 117
               + A  G        PP+  R KP  HEC ICG EFA+GQ                   
Sbjct:    59 --SAALEGH------APPSPKRVKPVKHECPICGAEFAVGQALGGHMRKHRGGSGGGGGR 110

Query:   118 XXXXTRXXXXXXVLKKSN--SCKRVFCLDLNLMPT-GDDLKL 156
                          +KKS   + KRV CLDLNL P   +DLKL
Sbjct:   111 SLAPA---TAPVTMKKSGGGNGKRVLCLDLNLTPLENEDLKL 149

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2075276 AT3G46080 "AT3G46080" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 72/162 (44%), Positives = 85/162 (52%)

Query:     3 RDREMAAI-DTA-NCLMLLSKVGETDQG--KRVFACKTCNKEFPSFQALGGHRASHKKPK 58
             R  E+  + DTA  CLMLLS+VGE   G  KRVF CKTC KEF SFQALGGHRASHKK  
Sbjct:     4 RSEEVEIVEDTAAKCLMLLSRVGECGGGGEKRVFRCKTCLKEFSSFQALGGHRASHKK-- 61

Query:    59 LMTMASSGEDFDQTQMPPASPRKPKT---HECSICGLEFAIGQXXXXXXXXXXXXXXX-X 114
             L+   SS    D + +   S +K KT   H C ICG+EF +GQ                 
Sbjct:    62 LIN--SS----DPSLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPG 115

Query:   115 XXXXXXXTRXXXXXXVLKKSNSCKRVFCLDLNLMPTGDDLKL 156
                             LKKS+S KRV CLDL+ M +  + KL
Sbjct:   116 TLVTRSFLPETTTVTTLKKSSSGKRVACLDLDSMESLVNWKL 157

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2075261 AT3G46070 "AT3G46070" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 65/156 (41%), Positives = 79/156 (50%)

Query:     4 DREMAAIDTA-NCLMLLSKVGETD-QGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMT 61
             D     +DTA +CLMLLS +GE D + KRVF CKTC ++F SFQALGGHRASH K     
Sbjct:     6 DNRDLTVDTAASCLMLLSGIGEHDGRKKRVFRCKTCERDFDSFQALGGHRASHSK----- 60

Query:    62 MASSGEDFDQTQMPPASPRKPKT------HECSICGLEFAIGQXXXXXXXXXXXXXXXXX 115
             + +S    D   +P +  +KPKT      H C ICGLEF +GQ                 
Sbjct:    61 LTNS----DDKSLPGSPKKKPKTTTTTTAHTCPICGLEFPMGQALGGHMRKHRNEKEREK 116

Query:   116 XXXXXXTRX----XXXXXVLKKSNSCKRVFCLDLNL 147
                   T            LKKS+S KRV CLD +L
Sbjct:   117 ASNVLVTHSFMPETTTVTTLKKSSSGKRVACLDFDL 152

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2168073 RHL41 "AT5G59820" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 68/153 (44%), Positives = 79/153 (51%)

Query:    10 IDTANCLMLLSKVGE--TDQG--KRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS 65
             +  ANCLMLLS+VG+   D G  KRVF CKTC K+F SFQALGGHRASHKKP    + SS
Sbjct:    13 VTAANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDAL-SS 71

Query:    66 GEDFDQTQMPPASPRKPKTHECSICGLEFAIGQXXXXXXXXXXXXXXXXXXXXXXXTRXX 125
             G       M      K  +H C ICG+EF +GQ                           
Sbjct:    72 G------LMKKV---KTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLP 122

Query:   126 X-XXXVLKKSNSCKRVFCLDLNL-MPTGDDLKL 156
                   LKKS+S KRV CLDL+L M    +LKL
Sbjct:   123 EPTVTTLKKSSSGKRVACLDLSLGMVDNLNLKL 155

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0009631 "cold acclimation" evidence=IMP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA;IMP

GO:0009408 "response to heat" evidence=IEP;IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009611 "response to wounding" evidence=IEP;RCA;IMP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA;IMP

GO:0010224 "response to UV-B" evidence=IEP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2075291 ZAT7 "AT3G46090" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 63/153 (41%), Positives = 79/153 (51%)

Query:     3 RDREMAAID---TANCLMLLSKVGETDQG----KRVFACKTCNKEFPSFQALGGHRASHK 55
             R  E+  ++   TA CLMLLS+VGE   G    +RVF CKTC KEF SFQALGGHRASHK
Sbjct:     4 RSEEIVIVEEDTTAKCLMLLSRVGECGGGCGGDERVFRCKTCLKEFSSFQALGGHRASHK 63

Query:    56 KPKLMTMASSGEDFDQTQMPPASPRKPKT-HECSICGLEFAIGQXXXXXXXXXXXXXXXX 114
             K     + +S    + + +   S +K KT H C ICG++F +GQ                
Sbjct:    64 K-----LINSD---NPSLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSG 115

Query:   115 XXXXXXXTRXXXXXXVLKKSNSCKRVFCLDLNL 147
                             LKK +S KRV CLDL+L
Sbjct:   116 SLVTRSFLPETTTVTALKKFSSGKRVACLDLDL 148

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0045926 "negative regulation of growth" evidence=IGI

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2142674 AT5G03510 "AT5G03510" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
 Identities = 24/29 (82%), Positives = 26/29 (89%)

Query:    31 VFACKTCNKEFPSFQALGGHRASHKKPKL 59
             V+ CKTC+K F SFQALGGHRASHKKPKL
Sbjct:   117 VYQCKTCDKSFHSFQALGGHRASHKKPKL 145

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2179924 AT5G04390 "AT5G04390" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:    28 GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS 65
             G  V+ CKTC++ FPSFQALGGHRASHKKPK  +  S+
Sbjct:   149 GYYVYQCKTCDRTFPSFQALGGHRASHKKPKAASFYSN 186

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2049811 ZAT11 "AT2G37430" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 62/170 (36%), Positives = 75/170 (44%)

Query:     1 MKRDRE-----MAAIDTANCLMLLSKVGETDQ-G---------KRVFACKTCNKEFPSFQ 45
             MKR+R      +  ID A CLM+L++     Q G            F CKTCNK F SFQ
Sbjct:     1 MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ 60

Query:    46 ALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQXXXXXXX 105
             ALGGHRASHKKPKL       E  D   +     +    H+CSIC   F  GQ       
Sbjct:    61 ALGGHRASHKKPKLTV-----EQKDVKHLSN-DYKGNHFHKCSICSQSFGTGQALGGHMR 114

Query:   106 XXXXXXXXXXXXXXXXTRXXXXXXVLKKSNSCKRVFCLDLNLMPTGDDLK 155
                             +       VLK+  S KR+  LDLNL P  +DL+
Sbjct:   115 RHRSSMTVEPSFI---SPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLE 161

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2075865 AT3G10470 "AT3G10470" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
 Identities = 27/50 (54%), Positives = 32/50 (64%)

Query:    28 GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPA 77
             G  V+ CKTC++ FPSFQALGGHRASHKKPK      S  D  ++    A
Sbjct:   178 GYYVYQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDA 227

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009555 "pollen development" evidence=IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2046153 AT2G28200 "AT2G28200" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
 Identities = 31/86 (36%), Positives = 46/86 (53%)

Query:     1 MKRDREMAAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLM 60
             + R   + + D  N   +  K+   +    V+ CKTCN+ F SFQALGGHRASHKKP+  
Sbjct:    84 LARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTS 143

Query:    61 TMASSGEDFDQTQMPPASPRKPKTHE 86
             T        ++T++P   P+   + E
Sbjct:   144 TE-------EKTRLPLTQPKSSASEE 162

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q42410	ZAT12_ARATH	No assigned EC number	0.5379	0.8679	0.8518	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_I1393 hypothetical protein (198 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	159
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	3e-06
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-04

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 14/27 (51%), Positives = 15/27 (55%)

Query: 31 VFACKTCNKEFPSFQALGGHRASHKKP 57
          V  C  C K F S QALGGH+ SH   
Sbjct: 1  VHTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 84  THECSICGLEFAIGQALGGHMRRHRAA 110
            H C +CG  F+  QALGGH + H + 
Sbjct: 1   VHTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.9
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.83
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.54
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.51
KOG3576	267	consensus Ovo and related transcription factors [T	99.5
KOG3576	267	consensus Ovo and related transcription factors [T	99.3
KOG3608	467	consensus Zn finger proteins [General function pre	99.27
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.25
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.04
PHA00733	128	hypothetical protein	99.04
PHA02768	55	hypothetical protein; Provisional	98.97
KOG3608	467	consensus Zn finger proteins [General function pre	98.88
PHA02768	55	hypothetical protein; Provisional	98.82
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.79
PLN03086	567	PRLI-interacting factor K; Provisional	98.64
PHA00616	44	hypothetical protein	98.55
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.55
PHA00733	128	hypothetical protein	98.5
PLN03086	567	PRLI-interacting factor K; Provisional	98.47
KOG3993	500	consensus Transcription factor (contains Zn finger	98.42
PHA00616	44	hypothetical protein	98.41
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.23
PHA00732	79	hypothetical protein	98.0
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.95
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.9
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.87
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.85
PHA00732	79	hypothetical protein	97.8
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.59
smart00355	26	ZnF_C2H2 zinc finger.	97.49
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.39
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.39
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.36
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.36
smart00355	26	ZnF_C2H2 zinc finger.	96.97
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.96
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.9
KOG3993	500	consensus Transcription factor (contains Zn finger	96.82
PRK04860	160	hypothetical protein; Provisional	96.8
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.49
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.24
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.09
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.89
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.34
KOG1146	1406	consensus Homeobox protein [General function predi	95.32
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.0
PRK04860	160	hypothetical protein; Provisional	94.81
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.72
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	93.62
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.08
KOG2893	341	consensus Zn finger protein [General function pred	92.72
COG5189	423	SFP1 Putative transcriptional repressor regulating	92.45
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	89.74
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.71
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.68
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	88.41
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	88.4
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	88.3
COG4049	65	Uncharacterized protein containing archaeal-type C	87.83
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.71
COG5048	467	FOG: Zn-finger [General function prediction only]	86.59
COG4049	65	Uncharacterized protein containing archaeal-type C	85.62
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.11
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.97
PRK06266	178	transcription initiation factor E subunit alpha; V	84.89
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	84.22
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	83.91
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.8
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	83.49
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.38
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	83.08
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	82.47
smart00531	147	TFIIE Transcription initiation factor IIE.	82.46
COG1592	166	Rubrerythrin [Energy production and conversion]	82.08
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	81.73
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	81.73
KOG2186	276	consensus Cell growth-regulating nucleolar protein	81.15
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	81.11
COG5048	467	FOG: Zn-finger [General function prediction only]	81.08
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	80.98
smart00531	147	TFIIE Transcription initiation factor IIE.	80.85

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.90  E-value=1.3e-24  Score=150.86  Aligned_cols=109  Identities=25%  Similarity=0.357  Sum_probs=93.9

Q ss_pred             cchHHHHHHHHhhccccC---CCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCC
Q 031430           10 IDTANCLMLLSKVGETDQ---GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPK   83 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~---~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k   83 (159)
                      .+.....+.|.+|+.+|-   ..+.+.|+.|+|.|.....|+.|+++|+  -+++|..||+.|.....|+   +.|+|||
T Consensus       137 gk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEK  214 (279)
T KOG2462|consen  137 GKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEK  214 (279)
T ss_pred             ccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCC
Confidence            334445667899999994   5778999999999999999999999998  7899999999999855443   8899999


Q ss_pred             cccccccccccCChhHHHHHHHHcccccCCCccccCC
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGL  120 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~  120 (159)
                      ||.|..|+|+|.+.++|+.||++|.+.++|.|..|+.
T Consensus       215 PF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~K  251 (279)
T KOG2462|consen  215 PFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGK  251 (279)
T ss_pred             CccCCcccchhcchHHHHHHHHhhcCCccccCcchhh
Confidence            9999999999999999999999999999995543333

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.83  E-value=5.3e-22  Score=137.98  Aligned_cols=96  Identities=23%  Similarity=0.334  Sum_probs=87.2

Q ss_pred             chHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccc
Q 031430           11 DTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHEC   87 (159)
Q Consensus        11 ~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C   87 (159)
                      +.+.-+..|+.|+++|+  .+++|.+|||.|.+..-|..|+|+|+||+||.|..|++.|.+.++|.   +.|.+.|+|.|
T Consensus       169 K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC  246 (279)
T KOG2462|consen  169 KVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQC  246 (279)
T ss_pred             ceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccC
Confidence            44445667999999999  68999999999999999999999999999999999999999998886   66889999999


Q ss_pred             cccccccCChhHHHHHHHHcc
Q 031430           88 SICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        88 ~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      ..|+|+|...+.|..|...-.
T Consensus       247 ~~C~KsFsl~SyLnKH~ES~C  267 (279)
T KOG2462|consen  247 PRCGKSFALKSYLNKHSESAC  267 (279)
T ss_pred             cchhhHHHHHHHHHHhhhhcc
Confidence            999999999999999987544

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.54  E-value=8.7e-16  Score=119.02  Aligned_cols=78  Identities=19%  Similarity=0.392  Sum_probs=73.3

Q ss_pred             CCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHHHHHH
Q 031430           28 GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALGGHM  104 (159)
Q Consensus        28 ~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~~H~  104 (159)
                      .+-.|.|+.|+|.|...+.|.+|.--|+|.+||+|.+|.+.|+.+.||.   +.|.|+|||.|+.|+|.|+..+++.+||
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            3458999999999999999999999999999999999999999999986   6688999999999999999999999999


Q ss_pred             H
Q 031430          105 R  105 (159)
Q Consensus       105 ~  105 (159)
                      -
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            5

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.51  E-value=5.5e-15  Score=116.02  Aligned_cols=51  Identities=20%  Similarity=0.291  Sum_probs=45.4

Q ss_pred             ccccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCC
Q 031430            7 MAAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus         7 ~~~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +..-+.|++.+.|+.|.++|+|++||+|++||..|.++.+|++|...|+..
T Consensus       357 r~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~  407 (958)
T KOG1074|consen  357 RFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREK  407 (958)
T ss_pred             hhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeecccc
Confidence            355678999999999999999999999999999999999999998766543

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.50  E-value=2.3e-15  Score=100.76  Aligned_cols=104  Identities=15%  Similarity=0.183  Sum_probs=70.1

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC----CCCCC----
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP----PASPR----   80 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l----~~~~~----   80 (159)
                      ..+.|..+-.|.+|+.-|...+.|-|..||+.|.....|++|.++|+|.+||+|..|++.|.+.-.|    .+.|.    
T Consensus       123 CgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~  202 (267)
T KOG3576|consen  123 CGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQ  202 (267)
T ss_pred             hhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHH
Confidence            4456777777777777777777777777777777777777777777777777777777777663332    22222    


Q ss_pred             ------CCCcccccccccccCChhHHHHHHHHcccccC
Q 031430           81 ------KPKTHECSICGLEFAIGQALGGHMRRHRAAAA  112 (159)
Q Consensus        81 ------~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~  112 (159)
                            ..+-|.|.+||.+-.....+-.|.+.|+...+
T Consensus       203 yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  203 YAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence                  34567777777777777777777776665433

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.30  E-value=5.2e-13  Score=89.62  Aligned_cols=79  Identities=23%  Similarity=0.439  Sum_probs=71.0

Q ss_pred             CCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHHHHHH
Q 031430           28 GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALGGHM  104 (159)
Q Consensus        28 ~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~~H~  104 (159)
                      +...|.|.+|+|.|...--|.+|+.-|...+.+.|..||+.|.+.-.|.   +.|+|.+||+|..|+++|.+..+|..|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            4557999999999999999999999999999999999999998844443   7799999999999999999999999998


Q ss_pred             HH
Q 031430          105 RR  106 (159)
Q Consensus       105 ~~  106 (159)
                      +.
T Consensus       194 ~k  195 (267)
T KOG3576|consen  194 KK  195 (267)
T ss_pred             HH
Confidence            64

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.27  E-value=8.8e-14  Score=100.21  Aligned_cols=138  Identities=16%  Similarity=0.185  Sum_probs=101.9

Q ss_pred             cchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcC--CCCcc--------------------------c
Q 031430           10 IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHK--KPKLM--------------------------T   61 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~--~~~~~--------------------------~   61 (159)
                      .+.+.....|..|+++|+++|...|+.||.-|..+..|-.|.+-.+  ...+|                          +
T Consensus       186 t~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~yk  265 (467)
T KOG3608|consen  186 TKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYK  265 (467)
T ss_pred             hhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhccc
Confidence            4567778899999999999999999999999999999988876443  23344                          5


Q ss_pred             cCCCCCCCCCCCCCC----CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc--cCCcc------------C
Q 031430           62 MASSGEDFDQTQMPP----ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA--DGLVT------------R  123 (159)
Q Consensus        62 c~~c~~~f~~~~~l~----~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~------------~  123 (159)
                      |+.|+.+....+.|.    -.|...|||+|+.|++.|.+.+.|..|..+|+ +..|.|.-  +.-.+            .
T Consensus       266 CplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~ev  344 (467)
T KOG3608|consen  266 CPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEV  344 (467)
T ss_pred             ccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHh
Confidence            555655555433332    23567999999999999999999999999998 66777654  22221            1


Q ss_pred             CCCCCcchhccCCCCceeeeccCCC
Q 031430          124 PLLPLPVLKKSNSCKRVFCLDLNLM  148 (159)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~l~  148 (159)
                      .....+..++|.-|.+.|..-.+|.
T Consensus       345 hEg~np~~Y~CH~Cdr~ft~G~~L~  369 (467)
T KOG3608|consen  345 HEGNNPILYACHCCDRFFTSGKSLS  369 (467)
T ss_pred             ccCCCCCceeeecchhhhccchhHH
Confidence            2344567788999998887766654

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.25  E-value=1.9e-12  Score=100.82  Aligned_cols=68  Identities=18%  Similarity=0.244  Sum_probs=63.2

Q ss_pred             cccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430            8 AAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus         8 ~~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      ...++|.-.+.|.+|.=.|+|.+||.|.+|.|+|+.+.+|..|.|.|.|++||.|+.|++.|......
T Consensus       899 qCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSY  966 (1007)
T KOG3623|consen  899 QCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSY  966 (1007)
T ss_pred             HHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccch
Confidence            45678888999999999999999999999999999999999999999999999999999999875554

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.04  E-value=1.1e-10  Score=92.32  Aligned_cols=80  Identities=21%  Similarity=0.304  Sum_probs=61.0

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCC-------CCccccc---ccccccCChhHH
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRK-------PKTHECS---ICGLEFAIGQAL  100 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~-------~k~~~C~---~Cgk~f~~~~~l  100 (159)
                      |-.|-.|-+.....+.|+.|.++|+|++||+|.+||+.|..+.+|+.|..+       .-.|.|+   +|-+.|.+.-.|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            456777777777777777777777777777777777777777777433221       2458899   999999999999


Q ss_pred             HHHHHHcccc
Q 031430          101 GGHMRRHRAA  110 (159)
Q Consensus       101 ~~H~~~h~~~  110 (159)
                      ..|+++|.+.
T Consensus       685 pQhIriH~~~  694 (958)
T KOG1074|consen  685 PQHIRIHLGG  694 (958)
T ss_pred             cceEEeecCC
Confidence            9999999954

>PHA00733 hypothetical protein

Probab=99.04  E-value=9.1e-11  Score=75.15  Aligned_cols=90  Identities=12%  Similarity=0.115  Sum_probs=66.8

Q ss_pred             HhhccccCCCceeecccccccCCChHHHHHh--HH---hcCCCCccccCCCCCCCCCCCCCCCCCC-CCCcccccccccc
Q 031430           20 SKVGETDQGKRVFACKTCNKEFPSFQALGGH--RA---SHKKPKLMTMASSGEDFDQTQMPPASPR-KPKTHECSICGLE   93 (159)
Q Consensus        20 ~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h--~~---~h~~~~~~~c~~c~~~f~~~~~l~~~~~-~~k~~~C~~Cgk~   93 (159)
                      ..+...-...+++.|.+|.+.|.....|..+  +.   .+.++++|.|..||+.|.....|..+.. ...+|.|..|++.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~  108 (128)
T PHA00733         29 KRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKE  108 (128)
T ss_pred             hhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCc
Confidence            3333334457789999999988887777665  21   2345789999999999998766643222 1567999999999


Q ss_pred             cCChhHHHHHHHHccc
Q 031430           94 FAIGQALGGHMRRHRA  109 (159)
Q Consensus        94 f~~~~~l~~H~~~h~~  109 (159)
                      |.+...|..|+...++
T Consensus       109 F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        109 FRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCHHHHHHHHHHhcC
Confidence            9999999999976654

>PHA02768 hypothetical protein; Provisional

Probab=98.97  E-value=5e-10  Score=60.11  Aligned_cols=44  Identities=11%  Similarity=0.159  Sum_probs=39.4

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP   76 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~   76 (159)
                      -|.|+.||+.|...++|..|++.|+  ++++|..|++.|...+.+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4799999999999999999999999  6899999999988766664

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.88  E-value=5.1e-10  Score=81.13  Aligned_cols=89  Identities=16%  Similarity=0.256  Sum_probs=51.4

Q ss_pred             HHHHhhcc-ccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC--CCCCCCCC----CCCCCCCCC--CCcccc
Q 031430           17 MLLSKVGE-TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS--SGEDFDQT----QMPPASPRK--PKTHEC   87 (159)
Q Consensus        17 ~~l~~h~~-~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~----~~l~~~~~~--~k~~~C   87 (159)
                      +.|..|++ .|...+||+|+.|++.|...+.|..|...|+ +..|.|..  |...+...    .+...+|.|  +.+|.|
T Consensus       277 ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~C  355 (467)
T KOG3608|consen  277 SSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYAC  355 (467)
T ss_pred             HHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceee
Confidence            34444444 3445555555555555555555555555554 44455544  44433331    111133433  567899


Q ss_pred             cccccccCChhHHHHHHHH
Q 031430           88 SICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        88 ~~Cgk~f~~~~~l~~H~~~  106 (159)
                      ..|++.|.+..+|..|+..
T Consensus       356 H~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  356 HCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             ecchhhhccchhHHHHHHH
Confidence            9999999999999999754

>PHA02768 hypothetical protein; Provisional

Probab=98.82  E-value=3.5e-09  Score=56.87  Aligned_cols=44  Identities=27%  Similarity=0.556  Sum_probs=35.3

Q ss_pred             cccccccccccCChhHHHHHHHHcccccCCCccccCCccCCCCCCcchhccCCCCceeeeccCCC
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNLM  148 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  148 (159)
                      -|.|++||+.|...++|..|+++|+  +++                   +|..|++.|....+|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~-------------------kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNL-------------------KLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Ccc-------------------cCCcccceecccceeE
Confidence            4799999999999999999999999  455                   4566667776666554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.79  E-value=1.8e-09  Score=49.73  Aligned_cols=24  Identities=29%  Similarity=0.686  Sum_probs=18.1

Q ss_pred             HHhhccccCCCceeecccccccCC
Q 031430           19 LSKVGETDQGKRVFACKTCNKEFP   42 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~C~~~f~   42 (159)
                      |..|+++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            667777777777777777777774

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.64  E-value=7.7e-08  Score=75.03  Aligned_cols=85  Identities=14%  Similarity=0.223  Sum_probs=61.8

Q ss_pred             CCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCC--------
Q 031430           28 GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAI--------   96 (159)
Q Consensus        28 ~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~--------   96 (159)
                      -++.+.|+.|++.|. ...|..|+..++  .++.|+ ||..+. ...|.   ..|...+++.|..|++.|..        
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~~-R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~  524 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVLE-KEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVR  524 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCcc-hhHHHhhhhccCCCCceeCCCCCCccccCccccchh
Confidence            355678999999985 677899998875  789998 997553 33332   33557899999999999852        


Q ss_pred             --hhHHHHHHHHcccccCCCcccc
Q 031430           97 --GQALGGHMRRHRAAAAMGAVAD  118 (159)
Q Consensus        97 --~~~l~~H~~~h~~~~~~~~~~~  118 (159)
                        .+.|..|...+ +.+++.|..|
T Consensus       525 d~~s~Lt~HE~~C-G~rt~~C~~C  547 (567)
T PLN03086        525 DRLRGMSEHESIC-GSRTAPCDSC  547 (567)
T ss_pred             hhhhhHHHHHHhc-CCcceEcccc
Confidence              34788888875 7777654333

>PHA00616 hypothetical protein

Probab=98.55  E-value=3.4e-08  Score=50.53  Aligned_cols=32  Identities=16%  Similarity=0.234  Sum_probs=30.1

Q ss_pred             cccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      ||+|..||+.|.+.+.|..|++.|++++++.+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68999999999999999999999999988865

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.55  E-value=2.8e-08  Score=45.67  Aligned_cols=25  Identities=24%  Similarity=0.343  Sum_probs=22.3

Q ss_pred             HHHHhHHhcCCCCccccCCCCCCCC
Q 031430           46 ALGGHRASHKKPKLMTMASSGEDFD   70 (159)
Q Consensus        46 ~l~~h~~~h~~~~~~~c~~c~~~f~   70 (159)
                      +|..|++.|+++++|.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4789999999999999999998875

...

>PHA00733 hypothetical protein

Probab=98.50  E-value=3.4e-08  Score=63.35  Aligned_cols=54  Identities=20%  Similarity=0.292  Sum_probs=44.9

Q ss_pred             HHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430           19 LSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      |.+|+.++ +.+||.|+.|++.|.....|..|++.+  ..++.|..|++.|.....|
T Consensus        62 l~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         62 LYKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             HHhhcccC-CCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            45554444 488999999999999999999999976  3579999999999886665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.47  E-value=1.4e-07  Score=73.61  Aligned_cols=85  Identities=16%  Similarity=0.218  Sum_probs=66.0

Q ss_pred             HHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCC----------CCCCCCC--CCCC
Q 031430           16 LMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQT----------QMPPASP--RKPK   83 (159)
Q Consensus        16 ~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~----------~~l~~~~--~~~k   83 (159)
                      ...|..|..+|.  +++.|+ |++.+ ....|..|+..|.+.+++.|..|+..+...          ..|..|.  -+.+
T Consensus       465 ~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~r  540 (567)
T PLN03086        465 QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSR  540 (567)
T ss_pred             hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCc
Confidence            456899999984  899999 99765 678999999999999999999999988521          1232221  2899


Q ss_pred             cccccccccccCChhHHHHHHH
Q 031430           84 THECSICGLEFAIGQALGGHMR  105 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~  105 (159)
                      ++.|..||+.|.... +..|+.
T Consensus       541 t~~C~~Cgk~Vrlrd-m~~H~~  561 (567)
T PLN03086        541 TAPCDSCGRSVMLKE-MDIHQI  561 (567)
T ss_pred             ceEccccCCeeeehh-HHHHHH
Confidence            999999999987764 455653

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.42  E-value=2e-07  Score=69.29  Aligned_cols=93  Identities=19%  Similarity=0.281  Sum_probs=60.6

Q ss_pred             HHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccc--cCCCCC-CCCCCCCC-----CCCCCCCCcccccc
Q 031430           18 LLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMT--MASSGE-DFDQTQMP-----PASPRKPKTHECSI   89 (159)
Q Consensus        18 ~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~--c~~c~~-~f~~~~~l-----~~~~~~~k~~~C~~   89 (159)
                      .|.+|.-...-.-.|+|++|+|.|....+|..|+|+|.-.....  -..-.+ ........     ......+-.|.|..
T Consensus       282 ~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~  361 (500)
T KOG3993|consen  282 ALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHT  361 (500)
T ss_pred             HHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHH
Confidence            56777765555557999999999999999999999996322110  000000 00000000     00012244799999


Q ss_pred             cccccCChhHHHHHHHHcccc
Q 031430           90 CGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        90 Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      |+|.|.+...|+.|+-+|...
T Consensus       362 C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  362 CGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             hhhhhHHHHHHHHhHHhhhcc
Confidence            999999999999999888754

>PHA00616 hypothetical protein

Probab=98.41  E-value=1e-07  Score=48.83  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=31.4

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      ||.|..||+.|..++.|..|++.|+|++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999988753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.23  E-value=7.2e-07  Score=39.63  Aligned_cols=23  Identities=48%  Similarity=0.924  Sum_probs=21.5

Q ss_pred             ccccccccccCChhHHHHHHHHc
Q 031430           85 HECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      |.|+.||+.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=98.00  E-value=5.6e-06  Score=48.48  Aligned_cols=38  Identities=18%  Similarity=0.380  Sum_probs=31.3

Q ss_pred             eeecccccccCCChHHHHHhHHh-cCCCCccccCCCCCCCCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRAS-HKKPKLMTMASSGEDFDQ   71 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~   71 (159)
                      ||.|..|++.|.....|..|++. |.+   +.|+.||+.|..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~   39 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRR   39 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCC
Confidence            58899999999999999999984 543   468888887764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.95  E-value=4.2e-06  Score=60.36  Aligned_cols=70  Identities=23%  Similarity=0.390  Sum_probs=48.8

Q ss_pred             Cceeeccc--ccccCCChHHHHHhHHh-cCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHH
Q 031430           29 KRVFACKT--CNKEFPSFQALGGHRAS-HKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMR  105 (159)
Q Consensus        29 ~k~~~C~~--C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~  105 (159)
                      +|||+|++  |+|.|.....|+.|+.- |...+...-+.       .......-...|||+|+.|+|.|.+...|+.|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~-------p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPS-------PEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCC-------ccccccccccCCceeccccchhhccCccceeccc
Confidence            59999998  99999999999998653 33332222110       0011111235799999999999999999988864

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.90  E-value=7e-06  Score=36.34  Aligned_cols=23  Identities=35%  Similarity=0.694  Sum_probs=21.3

Q ss_pred             eecccccccCCChHHHHHhHHhc
Q 031430           32 FACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.87  E-value=7.4e-06  Score=37.79  Aligned_cols=26  Identities=38%  Similarity=0.635  Sum_probs=23.8

Q ss_pred             cccccccccccCChhHHHHHHHHccc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      +|.|..|++.|.....|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998764

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.85  E-value=1.3e-05  Score=35.61  Aligned_cols=24  Identities=42%  Similarity=0.844  Sum_probs=20.0

Q ss_pred             ccccccccccCChhHHHHHHHHcc
Q 031430           85 HECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      |.|++|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999998763

...

>PHA00732 hypothetical protein

Probab=97.80  E-value=2.5e-05  Score=45.72  Aligned_cols=23  Identities=39%  Similarity=0.663  Sum_probs=15.2

Q ss_pred             cccccccccccCChhHHHHHHHH
Q 031430           84 THECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      ||.|..||+.|.+...|..|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARR   23 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhc
Confidence            45666677777776667766663

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.59  E-value=3.9e-05  Score=35.30  Aligned_cols=25  Identities=44%  Similarity=0.826  Sum_probs=23.1

Q ss_pred             eeecccccccCCChHHHHHhHHhcC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998875

>smart00355 ZnF_C2H2 zinc finger

Probab=97.49  E-value=0.00011  Score=33.00  Aligned_cols=25  Identities=40%  Similarity=0.664  Sum_probs=22.3

Q ss_pred             ccccccccccCChhHHHHHHHHccc
Q 031430           85 HECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      |.|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            5799999999999999999997753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.39  E-value=0.00015  Score=31.99  Aligned_cols=23  Identities=39%  Similarity=0.736  Sum_probs=19.4

Q ss_pred             eecccccccCCChHHHHHhHHhc
Q 031430           32 FACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      |.|+.|++.|.....|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999875

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.39  E-value=0.00026  Score=37.21  Aligned_cols=35  Identities=17%  Similarity=0.387  Sum_probs=25.5

Q ss_pred             CCCCCCcccccccccccCChhHHHHHHHHcccccC
Q 031430           78 SPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAA  112 (159)
Q Consensus        78 ~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~  112 (159)
                      .+..+.|-.|++|+..+.+..+|.+|+.++++.+|
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34468899999999999999999999999888766

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.36  E-value=0.00051  Score=37.17  Aligned_cols=51  Identities=27%  Similarity=0.491  Sum_probs=32.0

Q ss_pred             eeecccccccCCChHHHHHhHHh-cCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHHHcc
Q 031430           31 VFACKTCNKEFPSFQALGGHRAS-HKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      .|.|+.|++. .....|..|... |..+                        .+.+.|++|...+.  ..|..|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~------------------------~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSE------------------------SKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCC------------------------CCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4789999994 556788888665 3322                        12345666665433  37777876654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.36  E-value=0.00014  Score=44.23  Aligned_cols=72  Identities=19%  Similarity=0.329  Sum_probs=22.5

Q ss_pred             ecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCC--CCCCCcccccccccccCChhHHHHHHHHcc
Q 031430           33 ACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPAS--PRKPKTHECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~--~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      .|..|+..|.....|..|+....+-..-....    +.....+...  ......+.|..|++.|.+...|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKY----LVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Cccccccccccccccccccccccccccccccc----cccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            48899999999999999986544321111100    1111111111  112336999999999999999999999754

>smart00355 ZnF_C2H2 zinc finger

Probab=96.97  E-value=0.00081  Score=29.99  Aligned_cols=24  Identities=38%  Similarity=0.681  Sum_probs=21.5

Q ss_pred             eecccccccCCChHHHHHhHHhcC
Q 031430           32 FACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.96  E-value=0.001  Score=35.02  Aligned_cols=35  Identities=17%  Similarity=0.227  Sum_probs=24.6

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCc
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKL   59 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (159)
                      .+..+.|..|++|+..+.+..+|.+|+..+.+.+|
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34567899999999999999999999988776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.90  E-value=0.0005  Score=30.84  Aligned_cols=23  Identities=30%  Similarity=0.673  Sum_probs=20.8

Q ss_pred             ccccccccccCChhHHHHHHHHc
Q 031430           85 HECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      |.|..|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999754

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.82  E-value=0.00014  Score=54.61  Aligned_cols=85  Identities=13%  Similarity=0.157  Sum_probs=50.0

Q ss_pred             cccCCCCCCCCCCCCCCCCCC----CCCcccccccccccCChhHHHHHHHHcccccCCCccccCC--------------c
Q 031430           60 MTMASSGEDFDQTQMPPASPR----KPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGL--------------V  121 (159)
Q Consensus        60 ~~c~~c~~~f~~~~~l~~~~~----~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~--------------~  121 (159)
                      |.|..|...|.+.=.|. .|+    ....|+|++|+|.|+-..+|..|.|=|........+....              .
T Consensus       268 yiCqLCK~kYeD~F~LA-QHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALA-QHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHh-hccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            56666666555432331 122    3456899999999999999999999886543222111000              0


Q ss_pred             cCCCCCCcchhccCCCCceeeecc
Q 031430          122 TRPLLPLPVLKKSNSCKRVFCLDL  145 (159)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~  145 (159)
                      -.-.........|..|+|.|.-..
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqA  370 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQA  370 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHH
Confidence            011223445788999999886543

>PRK04860 hypothetical protein; Provisional

Probab=96.80  E-value=0.0011  Score=44.18  Aligned_cols=36  Identities=17%  Similarity=0.365  Sum_probs=27.3

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFD   70 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~   70 (159)
                      +|.|. |+.   ....+.+|.++|+++++|.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            67886 876   5566778888888888888888877664

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.49  E-value=0.0021  Score=28.46  Aligned_cols=23  Identities=26%  Similarity=0.626  Sum_probs=18.5

Q ss_pred             ccccccccccCChhHHHHHHHHcc
Q 031430           85 HECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      |.|..|+.... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999999888 899999999865

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.24  E-value=0.0026  Score=28.41  Aligned_cols=23  Identities=43%  Similarity=0.730  Sum_probs=20.6

Q ss_pred             eecccccccCCChHHHHHhHHhc
Q 031430           32 FACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998754

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.09  E-value=0.0059  Score=27.43  Aligned_cols=21  Identities=33%  Similarity=0.632  Sum_probs=17.7

Q ss_pred             ccccccccccCChhHHHHHHHH
Q 031430           85 HECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      ..|+.||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4699999999 77889999865

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.89  E-value=0.0022  Score=29.34  Aligned_cols=22  Identities=27%  Similarity=0.545  Sum_probs=19.7

Q ss_pred             ccccccccccCChhHHHHHHHH
Q 031430           85 HECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      |-|..|++.|.+...+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999998764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.34  E-value=0.0063  Score=27.77  Aligned_cols=22  Identities=41%  Similarity=0.694  Sum_probs=19.5

Q ss_pred             eecccccccCCChHHHHHhHHh
Q 031430           32 FACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      |.|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999988754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=95.32  E-value=0.018  Score=49.38  Aligned_cols=81  Identities=17%  Similarity=0.251  Sum_probs=54.2

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCC-CccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHH
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKP-KLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGH  103 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H  103 (159)
                      .|+-.+.|.|+.|+..|.....|..|+|..+-+ ..-.|.. ++.-.........-.+.++|.|..|..++..+..|.+|
T Consensus       459 L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~-gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsih  537 (1406)
T KOG1146|consen  459 LHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKA-GQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIH  537 (1406)
T ss_pred             eecccccccCCccchhhhhHHHhhhcccccccccchhHhHh-ccccccccccccccCCCCcccceeeeeeeecchHHHHH
Confidence            455568899999999999999999999873321 1111211 11111111111112257899999999999999999999


Q ss_pred             HHH
Q 031430          104 MRR  106 (159)
Q Consensus       104 ~~~  106 (159)
                      +..
T Consensus       538 lqS  540 (1406)
T KOG1146|consen  538 LQS  540 (1406)
T ss_pred             HHH
Confidence            874

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.00  E-value=0.017  Score=25.40  Aligned_cols=23  Identities=22%  Similarity=0.469  Sum_probs=17.7

Q ss_pred             eecccccccCCChHHHHHhHHhcC
Q 031430           32 FACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      |.|+.|+.... ...|..|++.+.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 889999988753

>PRK04860 hypothetical protein; Provisional

Probab=94.81  E-value=0.034  Score=37.14  Aligned_cols=35  Identities=20%  Similarity=0.188  Sum_probs=27.9

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccccCCCccccCC
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGL  120 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~  120 (159)
                      .-+|.|. |+.   ....+.+|.++|.++++|.|..|..
T Consensus       117 ~~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~  151 (160)
T PRK04860        117 TFPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGE  151 (160)
T ss_pred             EEEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCc
Confidence            3579998 998   6778899999999999996644433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.72  E-value=0.025  Score=27.31  Aligned_cols=23  Identities=17%  Similarity=0.556  Sum_probs=20.3

Q ss_pred             cccccccccccCChhHHHHHHHH
Q 031430           84 THECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=93.62  E-value=0.09  Score=28.26  Aligned_cols=35  Identities=20%  Similarity=0.322  Sum_probs=23.6

Q ss_pred             cccccccccccCChhHHHHHHHH-cccc-cCCCccccC
Q 031430           84 THECSICGLEFAIGQALGGHMRR-HRAA-AAMGAVADG  119 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~-h~~~-~~~~~~~~~  119 (159)
                      .|.|+.||+. .+...|..|... |..+ +.+.|..+.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~   38 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICS   38 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCch
Confidence            4899999995 556789999765 5543 344454443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.08  E-value=0.098  Score=25.11  Aligned_cols=23  Identities=30%  Similarity=0.531  Sum_probs=19.8

Q ss_pred             eeecccccccCCChHHHHHhHHh
Q 031430           31 VFACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      +|.|++|+..|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999988888754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=92.72  E-value=0.015  Score=40.87  Aligned_cols=45  Identities=27%  Similarity=0.459  Sum_probs=20.8

Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHH-HHHc
Q 031430           62 MASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGH-MRRH  107 (159)
Q Consensus        62 c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H-~~~h  107 (159)
                      |..|++.|.+..-|+ .|..-|.|+|.+|-|...+...|..| +++|
T Consensus        13 cwycnrefddekili-qhqkakhfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILI-QHQKAKHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhh-hhhhhccceeeeehhhhccCCCceeehhhhh
Confidence            444555554443332 23334455555555544444444444 3444

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=92.45  E-value=0.14  Score=37.68  Aligned_cols=62  Identities=13%  Similarity=0.213  Sum_probs=39.0

Q ss_pred             CCCcccccc--cccccCChhHHHHHHH-HcccccCCCccccCCccCCCCCCcchhccCCCCceeee
Q 031430           81 KPKTHECSI--CGLEFAIGQALGGHMR-RHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCL  143 (159)
Q Consensus        81 ~~k~~~C~~--Cgk~f~~~~~l~~H~~-~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (159)
                      ++|||.|++  |+|.|.+...|+.|+. -|...+.....+..+- ..+......+.|.-|+|.+..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~-~~F~~~~KPYrCevC~KRYKN  410 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKM-NIFSAKDKPYRCEVCDKRYKN  410 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCcccc-ccccccCCceeccccchhhcc
Confidence            359999998  9999999999999985 3433332222111111 112223355688888888763

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=89.74  E-value=0.24  Score=32.86  Aligned_cols=12  Identities=42%  Similarity=1.005  Sum_probs=5.8

Q ss_pred             ccccccccccCC
Q 031430           85 HECSICGLEFAI   96 (159)
Q Consensus        85 ~~C~~Cgk~f~~   96 (159)
                      +.|+.||++|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            445555554443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.71  E-value=0.3  Score=30.40  Aligned_cols=31  Identities=29%  Similarity=0.443  Sum_probs=22.2

Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCCh
Q 031430           59 LMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIG   97 (159)
Q Consensus        59 ~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~   97 (159)
                      ...|+.||..|..   |     +..|..|+.||..|.-.
T Consensus         9 KR~Cp~CG~kFYD---L-----nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    9 KRTCPSCGAKFYD---L-----NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cccCCCCcchhcc---C-----CCCCccCCCCCCccCcc
Confidence            3568888888763   2     12577899999888765

The function of members of this family is unknown.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.68  E-value=0.24  Score=23.69  Aligned_cols=10  Identities=30%  Similarity=0.963  Sum_probs=5.8

Q ss_pred             Cccccccccc
Q 031430           83 KTHECSICGL   92 (159)
Q Consensus        83 k~~~C~~Cgk   92 (159)
                      .++.|++||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4556666653

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=88.41  E-value=0.45  Score=28.47  Aligned_cols=24  Identities=46%  Similarity=0.704  Sum_probs=21.4

Q ss_pred             eeecccccccCCChHHHHHhHHhc
Q 031430           31 VFACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      .+.|..|++.|.....|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            689999999999999999999875

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=88.40  E-value=0.48  Score=33.25  Aligned_cols=17  Identities=29%  Similarity=0.761  Sum_probs=11.7

Q ss_pred             CceeecccccccCCChH
Q 031430           29 KRVFACKTCNKEFPSFQ   45 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~   45 (159)
                      ++...|++|++.|....
T Consensus         3 ~k~~~CPvC~~~F~~~~   19 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKK   19 (214)
T ss_pred             CCceECCCCCCeeeeeE
Confidence            35567888888876553

>TIGR00622 ssl1 transcription factor ssl1

Probab=88.30  E-value=1.4  Score=27.48  Aligned_cols=77  Identities=14%  Similarity=0.210  Sum_probs=49.4

Q ss_pred             ceeecccccccCCChHHHHHhHHhcC-------CCC-------ccccCCCCCCCCCCCCCC-CCCCCCCccccccccccc
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHK-------KPK-------LMTMASSGEDFDQTQMPP-ASPRKPKTHECSICGLEF   94 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~-------~~~-------~~~c~~c~~~f~~~~~l~-~~~~~~k~~~C~~Cgk~f   94 (159)
                      -|..|+.|+-..-...+|.+.  .|.       .+.       ...|..|...|....... ..-.....|+|+.|...|
T Consensus        14 LP~~CpiCgLtLVss~HLARS--yHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARS--YHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFDELKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHh--hhccCCCcccccccccccCCCCcccCcCCCCCCcccccccccccccceeCCCCCCcc
Confidence            467899999888877777753  111       011       123777888776532211 001234568999999999


Q ss_pred             CChhHHHHHHHHcc
Q 031430           95 AIGQALGGHMRRHR  108 (159)
Q Consensus        95 ~~~~~l~~H~~~h~  108 (159)
                      -..-..-.|...|.
T Consensus        92 C~dCD~fiHe~Lh~  105 (112)
T TIGR00622        92 CVDCDVFVHESLHC  105 (112)
T ss_pred             ccccchhhhhhccC
Confidence            98887777877665

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.83  E-value=0.29  Score=26.33  Aligned_cols=30  Identities=17%  Similarity=0.359  Sum_probs=25.9

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHh
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      ++..||..+.|+-|+..|.....+.+|+..
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            456788899999999999999999999764

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.71  E-value=0.5  Score=21.32  Aligned_cols=10  Identities=40%  Similarity=1.119  Sum_probs=6.1

Q ss_pred             cccccccccC
Q 031430           86 ECSICGLEFA   95 (159)
Q Consensus        86 ~C~~Cgk~f~   95 (159)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            4666766663

Several members are annotated as putative helicases.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.59  E-value=0.38  Score=36.59  Aligned_cols=51  Identities=22%  Similarity=0.268  Sum_probs=28.7

Q ss_pred             chHHHHHHHHhhcc--ccCCC--ceeecc--cccccCCChHHHHHhHHhcCCCCccc
Q 031430           11 DTANCLMLLSKVGE--TDQGK--RVFACK--TCNKEFPSFQALGGHRASHKKPKLMT   61 (159)
Q Consensus        11 ~~~~~~~~l~~h~~--~h~~~--k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~   61 (159)
                      ..|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+..+..
T Consensus       297 ~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (467)
T COG5048         297 ISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAK  353 (467)
T ss_pred             CCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccc
Confidence            34444445555555  56666  666666  46666666666666665555544443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=85.62  E-value=0.38  Score=25.88  Aligned_cols=28  Identities=18%  Similarity=0.388  Sum_probs=23.5

Q ss_pred             CCCCCcccccccccccCChhHHHHHHHH
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      ..|+.-+.|+-||..|.....+.+|.-.
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            3467888999999999999999999753

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.11  E-value=1.6  Score=29.12  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=26.2

Q ss_pred             HHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCC
Q 031430           19 LSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDF   69 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f   69 (159)
                      |+.-..-..+..-|.|+.|+..|.....+.         ..|.|+.||...
T Consensus        97 lk~~l~~e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373        97 LREKLEFETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             HHHHHhhccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            333444445556678888887777666653         257777777643

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.97  E-value=0.2  Score=35.10  Aligned_cols=41  Identities=17%  Similarity=0.272  Sum_probs=26.3

Q ss_pred             CCccccCCCCCCCCCCC----CCC---------CCCCCCCc-----ccccccccccCCh
Q 031430           57 PKLMTMASSGEDFDQTQ----MPP---------ASPRKPKT-----HECSICGLEFAIG   97 (159)
Q Consensus        57 ~~~~~c~~c~~~f~~~~----~l~---------~~~~~~k~-----~~C~~Cgk~f~~~   97 (159)
                      ++...|+.|++.|....    .+.         ....+..|     ..|+.||.+|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            46678999999998721    111         11223334     5899999887654

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=84.89  E-value=1.6  Score=29.74  Aligned_cols=42  Identities=21%  Similarity=0.348  Sum_probs=25.2

Q ss_pred             HHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCC
Q 031430           19 LSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDF   69 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f   69 (159)
                      |+.-..--....-|.|+.|+..|.....+.         ..|.|+.||...
T Consensus       105 lk~~l~~e~~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L  146 (178)
T PRK06266        105 LKEQLEEEENNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEML  146 (178)
T ss_pred             HHHHhhhccCCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCC
Confidence            333333334455678888887776665542         357777777654

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=84.22  E-value=0.85  Score=22.40  Aligned_cols=12  Identities=25%  Similarity=0.722  Sum_probs=6.3

Q ss_pred             ecccccccCCCh
Q 031430           33 ACKTCNKEFPSF   44 (159)
Q Consensus        33 ~C~~C~~~f~~~   44 (159)
                      .|+.|+..|.-.
T Consensus         4 ~CP~C~~~f~v~   15 (37)
T PF13719_consen    4 TCPNCQTRFRVP   15 (37)
T ss_pred             ECCCCCceEEcC
Confidence            455555555433

>smart00614 ZnF_BED BED zinc finger

Probab=83.91  E-value=0.97  Score=23.75  Aligned_cols=24  Identities=29%  Similarity=0.733  Sum_probs=17.2

Q ss_pred             ccccccccccCCh-----hHHHHHHH-Hcc
Q 031430           85 HECSICGLEFAIG-----QALGGHMR-RHR  108 (159)
Q Consensus        85 ~~C~~Cgk~f~~~-----~~l~~H~~-~h~  108 (159)
                      -.|..|++.+...     ++|.+|++ .|.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            4577777777554     68999998 554

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.80  E-value=1.3  Score=21.62  Aligned_cols=13  Identities=15%  Similarity=0.621  Sum_probs=6.6

Q ss_pred             ecccccccCCChH
Q 031430           33 ACKTCNKEFPSFQ   45 (159)
Q Consensus        33 ~C~~C~~~f~~~~   45 (159)
                      .|+.|+..|.-..
T Consensus         4 ~Cp~C~~~y~i~d   16 (36)
T PF13717_consen    4 TCPNCQAKYEIDD   16 (36)
T ss_pred             ECCCCCCEEeCCH
Confidence            4555555554433

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=83.49  E-value=0.83  Score=22.37  Aligned_cols=13  Identities=23%  Similarity=0.769  Sum_probs=6.8

Q ss_pred             eecccccccCCCh
Q 031430           32 FACKTCNKEFPSF   44 (159)
Q Consensus        32 ~~C~~C~~~f~~~   44 (159)
                      +.|+.|+..|.-.
T Consensus         3 ~~CP~C~~~~~v~   15 (38)
T TIGR02098         3 IQCPNCKTSFRVV   15 (38)
T ss_pred             EECCCCCCEEEeC
Confidence            4555565555443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.38  E-value=4  Score=25.55  Aligned_cols=18  Identities=33%  Similarity=0.654  Sum_probs=12.2

Q ss_pred             cchhccCCCCceeeeccC
Q 031430          129 PVLKKSNSCKRVFCLDLN  146 (159)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~  146 (159)
                      ...+.|..|...|-.|-.
T Consensus        79 ~~~y~C~~C~~~FC~dCD   96 (112)
T TIGR00622        79 SHRYVCAVCKNVFCVDCD   96 (112)
T ss_pred             ccceeCCCCCCccccccc
Confidence            345678888888876654

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=83.08  E-value=0.43  Score=24.19  Aligned_cols=10  Identities=40%  Similarity=1.338  Sum_probs=4.9

Q ss_pred             eecccccccC
Q 031430           32 FACKTCNKEF   41 (159)
Q Consensus        32 ~~C~~C~~~f   41 (159)
                      |.|..||..|
T Consensus         6 y~C~~Cg~~f   15 (42)
T PF09723_consen    6 YRCEECGHEF   15 (42)
T ss_pred             EEeCCCCCEE
Confidence            4455555444

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=82.47  E-value=1.3  Score=28.21  Aligned_cols=34  Identities=18%  Similarity=0.240  Sum_probs=22.3

Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHH
Q 031430           59 LMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQAL  100 (159)
Q Consensus        59 ~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l  100 (159)
                      ...|+.||+.|..   |     +..|..|+.||..|.-...+
T Consensus         9 Kr~Cp~cg~kFYD---L-----nk~p~vcP~cg~~~~~~~~~   42 (129)
T TIGR02300         9 KRICPNTGSKFYD---L-----NRRPAVSPYTGEQFPPEEAL   42 (129)
T ss_pred             cccCCCcCccccc---c-----CCCCccCCCcCCccCcchhh
Confidence            3568888887753   2     23577888888887655333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=82.46  E-value=2.4  Score=27.89  Aligned_cols=39  Identities=15%  Similarity=0.354  Sum_probs=21.9

Q ss_pred             CCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCC
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDF   69 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f   69 (159)
                      .+..-|.|+.|+..|.....+..   .. ....|.|+.||...
T Consensus        95 ~~~~~Y~Cp~C~~~y~~~ea~~~---~d-~~~~f~Cp~Cg~~l  133 (147)
T smart00531       95 TNNAYYKCPNCQSKYTFLEANQL---LD-MDGTFTCPRCGEEL  133 (147)
T ss_pred             cCCcEEECcCCCCEeeHHHHHHh---cC-CCCcEECCCCCCEE
Confidence            44556788888877765443321   01 12337777777643

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=82.08  E-value=1  Score=30.26  Aligned_cols=24  Identities=25%  Similarity=0.519  Sum_probs=17.1

Q ss_pred             CccccCCCCCCCCCCCCCCCCCCCCCcccccccc
Q 031430           58 KLMTMASSGEDFDQTQMPPASPRKPKTHECSICG   91 (159)
Q Consensus        58 ~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cg   91 (159)
                      +.|.|..||.++          .++-|..|++||
T Consensus       133 ~~~vC~vCGy~~----------~ge~P~~CPiCg  156 (166)
T COG1592         133 KVWVCPVCGYTH----------EGEAPEVCPICG  156 (166)
T ss_pred             CEEEcCCCCCcc----------cCCCCCcCCCCC
Confidence            368888887653          346777888888

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=81.73  E-value=0.62  Score=23.14  Aligned_cols=10  Identities=30%  Similarity=1.218  Sum_probs=4.7

Q ss_pred             eecccccccC
Q 031430           32 FACKTCNKEF   41 (159)
Q Consensus        32 ~~C~~C~~~f   41 (159)
                      |.|..||..|
T Consensus         6 y~C~~Cg~~f   15 (41)
T smart00834        6 YRCEDCGHTF   15 (41)
T ss_pred             EEcCCCCCEE
Confidence            4444454444

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=81.73  E-value=0.96  Score=23.30  Aligned_cols=10  Identities=30%  Similarity=1.129  Sum_probs=4.5

Q ss_pred             eecccccccC
Q 031430           32 FACKTCNKEF   41 (159)
Q Consensus        32 ~~C~~C~~~f   41 (159)
                      |.|+.||..|
T Consensus         4 y~C~~CG~~~   13 (46)
T PRK00398          4 YKCARCGREV   13 (46)
T ss_pred             EECCCCCCEE
Confidence            4444444443

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=81.15  E-value=0.48  Score=33.79  Aligned_cols=25  Identities=20%  Similarity=0.361  Sum_probs=12.3

Q ss_pred             cccccccccccCChhHHHHHHHHccc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      -|.|-.||+.|-. ..+..|...-++
T Consensus        29 ~fSCIDC~k~F~~-~sYknH~kCITE   53 (276)
T KOG2186|consen   29 YFSCIDCGKTFER-VSYKNHTKCITE   53 (276)
T ss_pred             eeEEeeccccccc-chhhhhhhhcch
Confidence            3555555555554 344555544433

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=81.11  E-value=0.7  Score=24.41  Aligned_cols=11  Identities=27%  Similarity=1.093  Sum_probs=6.1

Q ss_pred             eecccccccCC
Q 031430           32 FACKTCNKEFP   42 (159)
Q Consensus        32 ~~C~~C~~~f~   42 (159)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (52)
T TIGR02605         6 YRCTACGHRFE   16 (52)
T ss_pred             EEeCCCCCEeE
Confidence            55555655554

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=81.08  E-value=1.1  Score=34.06  Aligned_cols=46  Identities=22%  Similarity=0.301  Sum_probs=32.2

Q ss_pred             ceeecccccccCCChHHHHHhHH--hcCCC--CccccC--CCCCCCCCCCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRA--SHKKP--KLMTMA--SSGEDFDQTQMP   75 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~--~h~~~--~~~~c~--~c~~~f~~~~~l   75 (159)
                      .++.|..|...|.....|..|.+  .|.++  +++.|.  .|++.|.....+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~  339 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDAL  339 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccc
Confidence            35677777777777777777777  67777  777777  577776664443

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=80.98  E-value=1.1  Score=21.59  Aligned_cols=10  Identities=40%  Similarity=1.135  Sum_probs=5.5

Q ss_pred             Cccccccccc
Q 031430           83 KTHECSICGL   92 (159)
Q Consensus        83 k~~~C~~Cgk   92 (159)
                      .|..|+.||.
T Consensus        17 ~p~~CP~Cg~   26 (34)
T cd00729          17 APEKCPICGA   26 (34)
T ss_pred             CCCcCcCCCC
Confidence            3446666663

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=80.85  E-value=0.96  Score=29.73  Aligned_cols=38  Identities=13%  Similarity=0.228  Sum_probs=24.2

Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCccccccccccc
Q 031430           56 KPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEF   94 (159)
Q Consensus        56 ~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f   94 (159)
                      +...|.|+.|+..|.....+..... ...|.|+.||...
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~~d~-~~~f~Cp~Cg~~l  133 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQLLDM-DGTFTCPRCGEEL  133 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHhcCC-CCcEECCCCCCEE
Confidence            4457899999988875322211111 3449999999765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	8e-10
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	8e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 50.5 bits (121), Expect = 8e-10
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 30 RVFACKTCNKEFPSFQALGGHRASHKKPK 58
          R + C  C +EF S QALGGH   H++ +
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVHRRDR 33

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 47.4 bits (113), Expect = 1e-08
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 82  PKTHECSICGLEFAIGQALGGHMRRHRAAAAM 113
           P+++ CS C  EF   QALGGHM  HR   A 
Sbjct: 4   PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR 35

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 18/90 (20%), Positives = 26/90 (28%), Gaps = 8/90 (8%)

Query: 27  QGKRVFACKTCNKEFPSFQALGGH--------RASHKKPKLMTMASSGEDFDQTQMPPAS 78
            G   F CK C+  + +   L  H          +H+         S             
Sbjct: 15  TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK 74

Query: 79  PRKPKTHECSICGLEFAIGQALGGHMRRHR 108
               K  +C  CG  F   Q L  HM + +
Sbjct: 75  EDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 8e-05
 Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 18/84 (21%)

Query: 25  TDQGKRVFACKTCNKEFPSFQALGGH-RASHKKPKLMTMASSGEDFDQTQMPPASPRKPK 83
            D+ +     K+C++ F +   L  H    H                    P  +     
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEH-----------------VGGPEQNNHVCY 61

Query: 84  THECSICGLEFAIGQALGGHMRRH 107
             EC   G  F     L  H+R H
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 16/83 (19%)

Query: 25  TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKT 84
            D+ +     K+C++ F +   L  H                        P  +      
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTME----------HVGG------PEQNNHVCYW 62

Query: 85  HECSICGLEFAIGQALGGHMRRH 107
            EC   G  F     L  H+R H
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVH 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.86
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.84
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.83
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.82
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.79
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.78
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.78
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.75
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.68
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.67
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.67
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.65
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.6
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.59
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.58
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.58
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.57
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.57
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.51
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.48
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.47
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.47
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.45
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.43
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.43
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.42
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.42
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.42
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.42
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.41
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.41
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.4
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.4
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.39
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.36
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.36
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.36
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.36
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.35
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.35
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.32
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.32
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.32
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.31
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.31
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.3
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.29
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.29
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.28
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.27
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.25
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.24
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.23
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.23
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.22
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.22
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.2
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.15
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.14
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.13
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.1
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.03
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.02
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.02
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.01
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.01
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.01
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.0
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.99
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.98
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.97
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.96
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.96
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.96
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.95
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.94
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.93
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.93
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.92
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.92
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.91
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.89
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.88
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.87
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.86
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.83
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.79
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.79
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.78
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.78
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.78
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.78
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.78
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.72
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.7
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.69
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.69
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.68
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.67
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.67
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.65
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.64
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.63
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.63
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.62
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.62
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.61
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.61
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.6
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.6
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.57
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.97
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.55
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.54
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.95
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.54
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.53
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.52
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.49
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.49
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.49
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.85
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.46
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.45
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.45
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.44
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.42
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.4
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.4
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.39
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.38
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.37
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.34
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.68
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.33
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.68
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.28
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.49
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.08
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.46
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.14
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.03
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.02
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.68
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.09
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.85
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	94.8
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	90.64
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.64
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	88.75
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.73
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	87.64
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.44
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.1
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	80.36
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	80.26

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=1.3e-25  Score=144.85  Aligned_cols=110  Identities=15%  Similarity=0.294  Sum_probs=95.2

Q ss_pred             HhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCC
Q 031430           20 SKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAI   96 (159)
Q Consensus        20 ~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~   96 (159)
                      ..|..+|.|+++|.|++|++.|.....|..|+++|+++++|.|..|++.|.....|.   ..|++++||.|++||+.|.+
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            446678999999999999999999999999999999999999999999999866664   45779999999999999999


Q ss_pred             hhHHHHHHHHcccccCCCccccCCccCCCCCCcchhccCCCCceee
Q 031430           97 GQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFC  142 (159)
Q Consensus        97 ~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (159)
                      .+.|..|+++|++++|+.+.             ....|..|++.|.
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~-------------k~~~C~~C~k~~~  123 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDS-------------KLYRLHPCRSLQI  123 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSS-------------CCEEECCCCSSCC
T ss_pred             HHHHHHHhHHhcCCCCCCCC-------------CCeecCCCCchhh
Confidence            99999999999988775432             2246777877664

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=2.2e-21  Score=121.82  Aligned_cols=97  Identities=20%  Similarity=0.295  Sum_probs=84.6

Q ss_pred             HHHhhccccCCCceeecccccccCCChHHHHHhHHh--cCCCCcc-ccCCCCCCC--CCCCCCC---CCCCCCCcccccc
Q 031430           18 LLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRAS--HKKPKLM-TMASSGEDF--DQTQMPP---ASPRKPKTHECSI   89 (159)
Q Consensus        18 ~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~--h~~~~~~-~c~~c~~~f--~~~~~l~---~~~~~~k~~~C~~   89 (159)
                      .|..|+++|+++++|.|.+|++.|.....|..|++.  |.+.+++ .|..|++.|  .....|.   +.|.++++|.|.+
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            477899999999999999999999999999999998  7777765 499999998  6666654   4577899999999


Q ss_pred             cccccCChhHHHHHHHHcccccCCC
Q 031430           90 CGLEFAIGQALGGHMRRHRAAAAMG  114 (159)
Q Consensus        90 Cgk~f~~~~~l~~H~~~h~~~~~~~  114 (159)
                      ||+.|.+...|..|+++|.......
T Consensus        86 C~k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           86 CGHSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             SCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             CCCccCCHHHHHHHHHHhCCcccCC
Confidence            9999999999999999988765543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.84  E-value=3.4e-23  Score=140.84  Aligned_cols=133  Identities=22%  Similarity=0.298  Sum_probs=105.5

Q ss_pred             HHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccc
Q 031430           15 CLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICG   91 (159)
Q Consensus        15 ~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cg   91 (159)
                      ....|..|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|.   ..|.++++|.|..|+
T Consensus        33 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  112 (190)
T 2i13_A           33 RSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECG  112 (190)
T ss_dssp             SSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTC
T ss_pred             CHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCC
Confidence            34568889999999999999999999999999999999999999999999999988755553   335578889999999


Q ss_pred             cccCChhHHHHHHHHcccccCCCccccCCccCCCCCC---------cchhccCCCCceeeeccCC
Q 031430           92 LEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPL---------PVLKKSNSCKRVFCLDLNL  147 (159)
Q Consensus        92 k~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l  147 (159)
                      +.|.+...|..|+++|.+++++.|..++..+.....+         .....|..|++.|....+|
T Consensus       113 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  177 (190)
T 2i13_A          113 KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDAL  177 (190)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             CccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHH
Confidence            9999999999999999999999888888776543322         2336788999998876655

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.83  E-value=1.8e-22  Score=137.26  Aligned_cols=130  Identities=22%  Similarity=0.368  Sum_probs=65.9

Q ss_pred             HHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCccccccccccc
Q 031430           18 LLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEF   94 (159)
Q Consensus        18 ~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f   94 (159)
                      .|..|..+|.++++|.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|.   ..|.++++|.|..|++.|
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            45666677777777777777777777777777777777777777777777776644442   224456677777777777


Q ss_pred             CChhHHHHHHHHcccccCCCccccCCccCCCCCC---------cchhccCCCCceeeeccCC
Q 031430           95 AIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPL---------PVLKKSNSCKRVFCLDLNL  147 (159)
Q Consensus        95 ~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l  147 (159)
                      .+...|..|+++|.+++++.|..++..+.....+         .....|..|++.|....+|
T Consensus        88 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A           88 SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHH
Confidence            7777777777777777777776666654432221         1224566677766655443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=3.1e-21  Score=122.39  Aligned_cols=87  Identities=24%  Similarity=0.344  Sum_probs=51.6

Q ss_pred             CCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCC------CCCCCCcccccccccccCChhHH
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPA------SPRKPKTHECSICGLEFAIGQAL  100 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~------~~~~~k~~~C~~Cgk~f~~~~~l  100 (159)
                      +++++|.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|..      .+.++++|.|.+|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            345566666666666666666666666666666666666666655333321      23455666666666666666666


Q ss_pred             HHHHHHcccccCC
Q 031430          101 GGHMRRHRAAAAM  113 (159)
Q Consensus       101 ~~H~~~h~~~~~~  113 (159)
                      ..|+++|.++++|
T Consensus        83 ~~H~~~h~~~~~~   95 (124)
T 2dlq_A           83 RLHMVSHTGEMPY   95 (124)
T ss_dssp             HHHHHHHSSSCSE
T ss_pred             HHHHHHcCCCCCc
Confidence            6666666665554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.82  E-value=8.6e-22  Score=133.90  Aligned_cols=139  Identities=19%  Similarity=0.107  Sum_probs=114.5

Q ss_pred             ccchHHHHHHHHhhccccCCCceeec--ccccccCCChHHHHHhHHhcCCCCccccC--CCCCCCCCCCCCC----CCC-
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFAC--KTCNKEFPSFQALGGHRASHKKPKLMTMA--SSGEDFDQTQMPP----ASP-   79 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~----~~~-   79 (159)
                      ....|.....|..|+++|.++++|.|  +.|++.|.....|..|++.|.++++|.|.  .|++.|.....|.    ..| 
T Consensus        20 C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~   99 (190)
T 1tf6_A           20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN   99 (190)
T ss_dssp             TCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSS
T ss_pred             CcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            34456678899999999999999999  88999999999999999999999999999  8999998855443    344 


Q ss_pred             CCCCcccc--cccccccCChhHHHHHHHHcccccCCCccc--cCCccCCCCCCc------chhccCC---CCceeeeccC
Q 031430           80 RKPKTHEC--SICGLEFAIGQALGGHMRRHRAAAAMGAVA--DGLVTRPLLPLP------VLKKSNS---CKRVFCLDLN  146 (159)
Q Consensus        80 ~~~k~~~C--~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~  146 (159)
                      .+.++|.|  ..||+.|.+...|..|+++|.++++|.|..  ++..+.....+.      ....|..   |++.|....+
T Consensus       100 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~~f~~~~~  179 (190)
T 1tf6_A          100 IKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL  179 (190)
T ss_dssp             TTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCCCCSCHHH
T ss_pred             CCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCCccccHHH
Confidence            47889999  899999999999999999999999999976  888765433221      1156666   8888876554


Q ss_pred             C
Q 031430          147 L  147 (159)
Q Consensus       147 l  147 (159)
                      |
T Consensus       180 l  180 (190)
T 1tf6_A          180 Y  180 (190)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=1.9e-20  Score=115.84  Aligned_cols=91  Identities=23%  Similarity=0.356  Sum_probs=82.0

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHHH
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALG  101 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~  101 (159)
                      ...++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|.   ..|.++++|.|.+|++.|.+...|.
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            3456889999999999999999999999999999999999999998854443   5577899999999999999999999


Q ss_pred             HHHHHcccccCCCc
Q 031430          102 GHMRRHRAAAAMGA  115 (159)
Q Consensus       102 ~H~~~h~~~~~~~~  115 (159)
                      .|+++|.+++++.+
T Consensus        91 ~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           91 VHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHTTSCCCCCC
T ss_pred             HHHHHhCCCCCCcC
Confidence            99999999988864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.80  E-value=5.3e-21  Score=125.98  Aligned_cols=108  Identities=19%  Similarity=0.187  Sum_probs=94.9

Q ss_pred             ccchHHHHHHHHhhccc-cCCCce--------eecccccccCCChHHHHHhHHhcCCCCccccCC--CCCCCCCCCCCC-
Q 031430            9 AIDTANCLMLLSKVGET-DQGKRV--------FACKTCNKEFPSFQALGGHRASHKKPKLMTMAS--SGEDFDQTQMPP-   76 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~-h~~~k~--------~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~-   76 (159)
                      ....|.....|..|+++ |.++.+        |.|..|++.|.....|..|++.|.++++|.|..  |++.|.....|. 
T Consensus        31 C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~  110 (155)
T 2rpc_A           31 CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI  110 (155)
T ss_dssp             CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHH
T ss_pred             CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHH
Confidence            44567778899999987 877665        899999999999999999999999999999998  999998854443 


Q ss_pred             --CCCCCCCcccccc--cccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 --ASPRKPKTHECSI--CGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 --~~~~~~k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                        +.|.++++|.|..  |++.|.+...|..|+++|+++++|.+.
T Consensus       111 H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          111 HKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence              5688899999997  999999999999999999999999774

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.6e-20  Score=114.04  Aligned_cols=89  Identities=17%  Similarity=0.256  Sum_probs=80.4

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHHH
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALG  101 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~  101 (159)
                      ++.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|.   ..|.++++|.|.+|++.|.+...|.
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            4678899999999999999999999999999999999999999998855543   4577899999999999999999999


Q ss_pred             HHHHHcccccCC
Q 031430          102 GHMRRHRAAAAM  113 (159)
Q Consensus       102 ~H~~~h~~~~~~  113 (159)
                      .|+++|+++++.
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999988654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.1e-20  Score=117.11  Aligned_cols=95  Identities=17%  Similarity=0.247  Sum_probs=83.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCC--CCCCCCcccccccccccCChh
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPA--SPRKPKTHECSICGLEFAIGQ   98 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~--~~~~~k~~~C~~Cgk~f~~~~   98 (159)
                      .++++|+++++|.|.+|++.|.....|..|++.|.  ++|.|..|++.|.....|..  .|.++++|.|.+|++.|.+..
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHH
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHH
Confidence            46788999999999999999999999999999984  78999999999988444421  278899999999999999999


Q ss_pred             HHHHHHH-HcccccCCCccc
Q 031430           99 ALGGHMR-RHRAAAAMGAVA  117 (159)
Q Consensus        99 ~l~~H~~-~h~~~~~~~~~~  117 (159)
                      .|..|++ +|.++++|.+..
T Consensus        84 ~L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           84 SIWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHHHcCCCCCCCCCC
Confidence            9999997 999999987643

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.79  E-value=4.3e-21  Score=121.86  Aligned_cols=104  Identities=22%  Similarity=0.271  Sum_probs=81.6

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC--CCCCCCCCCCCC---CCCCCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS--SGEDFDQTQMPP---ASPRKPK   83 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~---~~~~~~k   83 (159)
                      ....|.....|..|+++| ++++|.|..|++.|.....|..|++.|.++++|.|..  |++.|.....|.   +.|.+++
T Consensus        13 C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   91 (124)
T 1ubd_C           13 CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   91 (124)
T ss_dssp             CCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCC
T ss_pred             CcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCC
Confidence            344566677888998888 7888999999999999999999999999889999975  999888755553   3456788


Q ss_pred             ccccc--ccccccCChhHHHHHHHHcccccCC
Q 031430           84 THECS--ICGLEFAIGQALGGHMRRHRAAAAM  113 (159)
Q Consensus        84 ~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~~~  113 (159)
                      +|.|.  .||+.|.+...|..|+++|++++++
T Consensus        92 ~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           92 PYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            89995  5999999999999999999887654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=8.6e-20  Score=120.03  Aligned_cols=105  Identities=15%  Similarity=0.141  Sum_probs=48.2

Q ss_pred             HHHHHHHHhhcc---ccCCCceeecccc-----cccCCChHHHHHhHHhcCCCCccccCC--CCCCCCCCCCCC---CCC
Q 031430           13 ANCLMLLSKVGE---TDQGKRVFACKTC-----NKEFPSFQALGGHRASHKKPKLMTMAS--SGEDFDQTQMPP---ASP   79 (159)
Q Consensus        13 ~~~~~~l~~h~~---~h~~~k~~~C~~C-----~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~---~~~   79 (159)
                      |.....|..|++   +|.++++|.|..|     ++.|.....|..|++.|.++++|.|..  |++.|.....|.   +.|
T Consensus        13 f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   92 (155)
T 2gli_A           13 FDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH   92 (155)
T ss_dssp             CSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHc
Confidence            334444444444   4444444444321     244555555555555554444555542  555444432221   223


Q ss_pred             CCCCcccccc--cccccCChhHHHHHH-HHcccccCCCccc
Q 031430           80 RKPKTHECSI--CGLEFAIGQALGGHM-RRHRAAAAMGAVA  117 (159)
Q Consensus        80 ~~~k~~~C~~--Cgk~f~~~~~l~~H~-~~h~~~~~~~~~~  117 (159)
                      .++++|.|..  ||+.|.+...|..|+ ++|.++++|.|..
T Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           93 TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            4444555544  555555555555554 4454444444443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.78  E-value=9.4e-21  Score=119.36  Aligned_cols=89  Identities=22%  Similarity=0.398  Sum_probs=58.0

Q ss_pred             CCCceeeccc--ccccCCChHHHHHhHHhcCCCCccccC--CCCCCCCCCCCCC---CCCCCCCcccccccccccCChhH
Q 031430           27 QGKRVFACKT--CNKEFPSFQALGGHRASHKKPKLMTMA--SSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQA   99 (159)
Q Consensus        27 ~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~   99 (159)
                      +++++|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|.   ..|.++++|.|.+||+.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4566677765  777777777777777777666777776  5777666644432   23446667777777777777777


Q ss_pred             HHHHHHHcccccCCCc
Q 031430          100 LGGHMRRHRAAAAMGA  115 (159)
Q Consensus       100 l~~H~~~h~~~~~~~~  115 (159)
                      |..|+++|.+++++.|
T Consensus        82 l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHHTCCCEEC
T ss_pred             HHHHHHHhcCCCCeeC
Confidence            7777777766666533

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=1.9e-20  Score=118.74  Aligned_cols=101  Identities=21%  Similarity=0.311  Sum_probs=88.8

Q ss_pred             cchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHh---cCCCCccccCCCCCCCCCCCCCC---CCCCCCC
Q 031430           10 IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRAS---HKKPKLMTMASSGEDFDQTQMPP---ASPRKPK   83 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~---h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k   83 (159)
                      ...|.....|..|+++|.++++|.|+.|++.|.....|..|++.   +.++++|.|..|++.|.....|.   +.|.+++
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   93 (124)
T 2dlq_A           14 HKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEM   93 (124)
T ss_dssp             CCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSC
T ss_pred             CCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCC
Confidence            34566788899999999999999999999999999999999985   57889999999999999855553   4477899


Q ss_pred             cccccccccccCChhHHHHHHH-Hcccc
Q 031430           84 THECSICGLEFAIGQALGGHMR-RHRAA  110 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~-~h~~~  110 (159)
                      +|.|.+|++.|.+...|..|++ .|.++
T Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           94 PYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999999999999997 56655

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.78  E-value=5.7e-21  Score=120.37  Aligned_cols=99  Identities=19%  Similarity=0.335  Sum_probs=89.2

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecc--cccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACK--TCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPK   83 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k   83 (159)
                      ....|.....|..|+++|.++++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|.   +.|.+++
T Consensus        14 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   93 (119)
T 2jp9_A           14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK   93 (119)
T ss_dssp             SCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCC
T ss_pred             CcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCC
Confidence            345677788999999999999999999  79999999999999999999999999999999999865553   3466899


Q ss_pred             cccc--cccccccCChhHHHHHHHHc
Q 031430           84 THEC--SICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        84 ~~~C--~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      +|.|  +.||+.|.+...|..|+++|
T Consensus        94 ~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           94 PFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999  89999999999999999987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=9.3e-20  Score=113.44  Aligned_cols=86  Identities=19%  Similarity=0.361  Sum_probs=78.8

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHH
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQAL  100 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l  100 (159)
                      ..|+++++|.| .|++.|.....|..|++.|.++++|.|..|++.|.....|.   +.|.++++|.|.+|++.|.+...|
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            47899999999 99999999999999999999999999999999998865553   567889999999999999999999


Q ss_pred             HHHHHHcccc
Q 031430          101 GGHMRRHRAA  110 (159)
Q Consensus       101 ~~H~~~h~~~  110 (159)
                      ..|++.|...
T Consensus        82 ~~H~~~~~~~   91 (110)
T 2csh_A           82 HRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHcccc
Confidence            9999998764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.2e-20  Score=122.12  Aligned_cols=99  Identities=16%  Similarity=0.305  Sum_probs=89.3

Q ss_pred             chHHHHHHHHhhccccCCCceeeccc--ccccCCChHHHHHhHHhcCCCCccccCC--CCCCCCCCCCCC----CCCCCC
Q 031430           11 DTANCLMLLSKVGETDQGKRVFACKT--CNKEFPSFQALGGHRASHKKPKLMTMAS--SGEDFDQTQMPP----ASPRKP   82 (159)
Q Consensus        11 ~~~~~~~~l~~h~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~----~~~~~~   82 (159)
                      ..|.....|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|..  |++.|.....|.    ..|.++
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~  126 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE  126 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            45777888999999999999999985  9999999999999999999999999998  999999887774    457789


Q ss_pred             Ccccccc--cccccCChhHHHHHHHHccc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      ++|.|..  ||+.|.+...|..|+++|+|
T Consensus       127 ~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          127 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999988  99999999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.76  E-value=4.3e-20  Score=110.84  Aligned_cols=84  Identities=23%  Similarity=0.410  Sum_probs=73.1

Q ss_pred             CCceeecc--cccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHHHH
Q 031430           28 GKRVFACK--TCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALGG  102 (159)
Q Consensus        28 ~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~~  102 (159)
                      |+++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.....|.   ..|.++++|.|..||+.|.+.+.|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            47899998  59999999999999999999999999999999998865553   34668999999999999999999999


Q ss_pred             HHHHccccc
Q 031430          103 HMRRHRAAA  111 (159)
Q Consensus       103 H~~~h~~~~  111 (159)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999999874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=5.9e-19  Score=97.96  Aligned_cols=59  Identities=25%  Similarity=0.549  Sum_probs=52.5

Q ss_pred             CCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHHHc
Q 031430           28 GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        28 ~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      .|+||.|++||+.|...+.|..|+++|+++                         +||.|.+||++|.+.+.|..|+++|
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~e-------------------------kp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGY-------------------------RPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTC-------------------------CCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCC-------------------------cCeECCCCCCCcCCHHHHHHHhCcc
Confidence            479999999999999999999999998765                         5567778899999999999999999


Q ss_pred             cccc
Q 031430          108 RAAA  111 (159)
Q Consensus       108 ~~~~  111 (159)
                      +++.
T Consensus        56 tgep   59 (60)
T 4gzn_C           56 QNKP   59 (60)
T ss_dssp             SCC-
T ss_pred             CCCC
Confidence            9874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.75  E-value=3.6e-19  Score=120.90  Aligned_cols=112  Identities=20%  Similarity=0.311  Sum_probs=96.5

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecc--cccccCCChHHHHHhH-Hhc-CCCCcccc--CCCCCCCCCCCCCC---CCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACK--TCNKEFPSFQALGGHR-ASH-KKPKLMTM--ASSGEDFDQTQMPP---ASP   79 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~-~~h-~~~~~~~c--~~c~~~f~~~~~l~---~~~   79 (159)
                      ....|.....|..|+++|.++++|.|.  .|++.|.....|..|+ +.| .++++|.|  ..|++.|.....|.   +.|
T Consensus        50 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H  129 (190)
T 1tf6_A           50 CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH  129 (190)
T ss_dssp             CCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGG
T ss_pred             CChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHh
Confidence            345577788999999999999999999  8999999999999999 667 47789999  89999999855553   567


Q ss_pred             CCCCcccccc--cccccCChhHHHHHHHHcccccCCCccc---cCCccC
Q 031430           80 RKPKTHECSI--CGLEFAIGQALGGHMRRHRAAAAMGAVA---DGLVTR  123 (159)
Q Consensus        80 ~~~k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~~~~~~~~---~~~~~~  123 (159)
                      .++++|.|+.  ||+.|.+.+.|..|+++|.+   +.|..   ++..+.
T Consensus       130 ~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~  175 (190)
T 1tf6_A          130 TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGK  175 (190)
T ss_dssp             SSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCS
T ss_pred             CCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccc
Confidence            8999999988  99999999999999999998   77766   665543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.75  E-value=5.8e-19  Score=111.96  Aligned_cols=97  Identities=23%  Similarity=0.376  Sum_probs=80.7

Q ss_pred             CCceeecc--cccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccc--cccccCChhHH
Q 031430           28 GKRVFACK--TCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSI--CGLEFAIGQAL  100 (159)
Q Consensus        28 ~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~--Cgk~f~~~~~l  100 (159)
                      ++++|.|+  .|++.|.....|..|++.| ++++|.|..|++.|.....|.   ..|.++++|.|..  |++.|.+...|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            46789999  8999999999999999999 889999999999998854443   5677899999986  99999999999


Q ss_pred             HHHHHHcccccCCCcc--ccCCccCCC
Q 031430          101 GGHMRRHRAAAAMGAV--ADGLVTRPL  125 (159)
Q Consensus       101 ~~H~~~h~~~~~~~~~--~~~~~~~~~  125 (159)
                      ..|+++|.++++|.|.  .++..+...
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~  107 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQS  107 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSST
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCH
Confidence            9999999999998773  344444433

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=1.7e-19  Score=106.27  Aligned_cols=79  Identities=28%  Similarity=0.494  Sum_probs=69.6

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHHHHHHHHc
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      ||.|..|++.|.....|..|++.|.++++|.|..|++.|.....|.   ..|.++++|.|..||+.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            6899999999999999999999999999999999999998755553   3456889999999999999999999999999


Q ss_pred             cc
Q 031430          108 RA  109 (159)
Q Consensus       108 ~~  109 (159)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=7.4e-19  Score=106.44  Aligned_cols=84  Identities=27%  Similarity=0.464  Sum_probs=74.0

Q ss_pred             CCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCC--CcccccccccccCChhHHH
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKP--KTHECSICGLEFAIGQALG  101 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~--k~~~C~~Cgk~f~~~~~l~  101 (159)
                      +++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|.   +.|.++  ++|.|.+|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            57899999999999999999999999999999999999999998855553   234454  8999999999999999999


Q ss_pred             HHHH-Hcccc
Q 031430          102 GHMR-RHRAA  110 (159)
Q Consensus       102 ~H~~-~h~~~  110 (159)
                      .|++ +|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9996 78765

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.68  E-value=5.5e-18  Score=109.00  Aligned_cols=89  Identities=17%  Similarity=0.224  Sum_probs=76.6

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCC----CCC----
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPA----SPR----   80 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~----~~~----   80 (159)
                      ..+.|.....|..|+++|++++||.|++|++.|.....|..|+++|+++++|.|+.||+.|.....|..    +|.    
T Consensus        28 C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           28 CKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             TCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTT
T ss_pred             CCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCC
Confidence            456677788999999999999999999999999999999999999999999999999999998655531    222    


Q ss_pred             -CCCcccccccccccCCh
Q 031430           81 -KPKTHECSICGLEFAIG   97 (159)
Q Consensus        81 -~~k~~~C~~Cgk~f~~~   97 (159)
                       ..++|.|..|++.|...
T Consensus       108 ~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A          108 GDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             SSSCCEEECCCCSSCCCC
T ss_pred             CCCCCeecCCCCchhhhc
Confidence             34679999999998754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.4e-16  Score=94.51  Aligned_cols=82  Identities=24%  Similarity=0.447  Sum_probs=71.1

Q ss_pred             HHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChh
Q 031430           19 LSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQ   98 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~   98 (159)
                      |..|+++|+++++|.|.+|++.|.....|..|++.|.++.                     ..+++|.|.+|++.|....
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~---------------------~~~~~~~C~~C~~~f~~~~   61 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN---------------------FVPAAFVCSKCGKTFTRRN   61 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS---------------------CCCCCEECSSSCCEESCHH
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc---------------------CCCcceECCCCCChhCCHH
Confidence            5789999999999999999999999999999998776431                     1246899999999999999


Q ss_pred             HHHHHHHHcccccCCCccccCCc
Q 031430           99 ALGGHMRRHRAAAAMGAVADGLV  121 (159)
Q Consensus        99 ~l~~H~~~h~~~~~~~~~~~~~~  121 (159)
                      .|..|+++|.++.++.+..+++.
T Consensus        62 ~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           62 TMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             HHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             HHHHHHHHccCCCCcccCCCCCC
Confidence            99999999999999988766543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.67  E-value=8.5e-18  Score=110.52  Aligned_cols=99  Identities=19%  Similarity=0.232  Sum_probs=83.2

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHh-cCCCCc--------cccCCCCCCCCCCCCCC---CCCCCCCcccccc--
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRAS-HKKPKL--------MTMASSGEDFDQTQMPP---ASPRKPKTHECSI--   89 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~--   89 (159)
                      .++..+.+|.|..|++.|.....|..|++. |.+..+        |.|..|++.|.....|.   +.|.++++|.|..  
T Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   97 (155)
T 2rpc_A           18 WIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG   97 (155)
T ss_dssp             BCCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTT
T ss_pred             eechhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCC
Confidence            345677899999999999999999999998 776654        79999999998855543   3466899999998  


Q ss_pred             cccccCChhHHHHHHHHcccccCCCccc--cCCcc
Q 031430           90 CGLEFAIGQALGGHMRRHRAAAAMGAVA--DGLVT  122 (159)
Q Consensus        90 Cgk~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~  122 (159)
                      |++.|.+...|..|+++|.++++|.|..  ++..+
T Consensus        98 C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f  132 (155)
T 2rpc_A           98 CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF  132 (155)
T ss_dssp             TCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCB
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCcc
Confidence            9999999999999999999999987753  44443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.65  E-value=2.6e-17  Score=100.39  Aligned_cols=83  Identities=22%  Similarity=0.435  Sum_probs=73.3

Q ss_pred             CCCceeeccc--ccccCCChHHHHHhHHhcCCCCccccC--CCCCCCCCCCCCC---CCCCCCCcccccccccccCChhH
Q 031430           27 QGKRVFACKT--CNKEFPSFQALGGHRASHKKPKLMTMA--SSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQA   99 (159)
Q Consensus        27 ~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~   99 (159)
                      ...++|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|.   +.|.++++|.|.+|++.|.+...
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            3567899996  999999999999999999999999996  6999998855543   45778999999999999999999


Q ss_pred             HHHHHHHccc
Q 031430          100 LGGHMRRHRA  109 (159)
Q Consensus       100 l~~H~~~h~~  109 (159)
                      |..|+++|.+
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999999974

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=1.3e-16  Score=97.23  Aligned_cols=75  Identities=19%  Similarity=0.223  Sum_probs=64.5

Q ss_pred             HHHhhccccCCCceeecccccccCC-ChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCC
Q 031430           18 LLSKVGETDQGKRVFACKTCNKEFP-SFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAI   96 (159)
Q Consensus        18 ~l~~h~~~h~~~k~~~C~~C~~~f~-~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~   96 (159)
                      .+..|+++|.++++|.|.+|++.|. ....|..|++.|.+.                        +++|.|.+|++.|.+
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~------------------------~~~~~C~~C~k~F~~   66 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKL------------------------QDALKCQHCRKQFKS   66 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHH------------------------HHHHSCSSSCCCCSC
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCC------------------------CCCEECCCCCCccCC
Confidence            3567889999999999999999999 999999999988640                        256788889999999


Q ss_pred             hhHHHHHHHHcccccCCCcc
Q 031430           97 GQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        97 ~~~l~~H~~~h~~~~~~~~~  116 (159)
                      ...|..|+++|+++++....
T Consensus        67 ~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           67 KAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HHHHHHHHHHHSCSCSSCCC
T ss_pred             HHHHHHHHHHHcCCCCCCCC
Confidence            99999999999999886543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=2.2e-17  Score=98.68  Aligned_cols=80  Identities=21%  Similarity=0.396  Sum_probs=69.9

Q ss_pred             Cceeeccc--ccccCCChHHHHHhHHhcCCCCccccC--CCCCCCCCCCCCC---CCCCCCCcccccccccccCChhHHH
Q 031430           29 KRVFACKT--CNKEFPSFQALGGHRASHKKPKLMTMA--SSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALG  101 (159)
Q Consensus        29 ~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~  101 (159)
                      ..+|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|.   ..|.++++|.|.+||+.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799998  999999999999999999999999997  5999998755443   3466889999999999999999999


Q ss_pred             HHHHHcc
Q 031430          102 GHMRRHR  108 (159)
Q Consensus       102 ~H~~~h~  108 (159)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999884

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.3e-15  Score=87.51  Aligned_cols=66  Identities=26%  Similarity=0.505  Sum_probs=59.0

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHH
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALG  101 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~  101 (159)
                      +.++|+++++|.|++|++.|.....|..|++.|.++                         ++|.|.+|++.|.+...|.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~-------------------------~~~~C~~C~~~f~~~~~L~   59 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE-------------------------KPYKCLECGKAFSQNSGLI   59 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS-------------------------CCEECSSSCCEESSHHHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCC-------------------------CCeECCCCCcccCCHHHHH
Confidence            567899999999999999999999999999988643                         5678888999999999999


Q ss_pred             HHHHHcccccC
Q 031430          102 GHMRRHRAAAA  112 (159)
Q Consensus       102 ~H~~~h~~~~~  112 (159)
                      .|+++|+++..
T Consensus        60 ~H~~~H~~~~~   70 (72)
T 1x6e_A           60 NHQRIHTSGPS   70 (72)
T ss_dssp             HHHHHHHSSSS
T ss_pred             HHHHhcCCCCC
Confidence            99999998744

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.4e-15  Score=88.54  Aligned_cols=69  Identities=22%  Similarity=0.462  Sum_probs=59.8

Q ss_pred             HHhhccccCCCceeecccccccCCChHHHHHhHH-hcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCCh
Q 031430           19 LSKVGETDQGKRVFACKTCNKEFPSFQALGGHRA-SHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIG   97 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~   97 (159)
                      |..|+++|++++||.|++|++.|.....|..|++ .|.++                        .++|.|.+|++.|.+.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~------------------------~~~~~C~~C~~~f~~~   58 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN------------------------VAKFHCPHCDTVIARK   58 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS------------------------CSSEECSSSSCEESSH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC------------------------CCccCCCCCCCccCCH
Confidence            4679999999999999999999999999999987 45431                        3678999999999999


Q ss_pred             hHHHHHHHHccccc
Q 031430           98 QALGGHMRRHRAAA  111 (159)
Q Consensus        98 ~~l~~H~~~h~~~~  111 (159)
                      ..|..|+++|++..
T Consensus        59 ~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           59 SDLGVHLRKQHSYS   72 (77)
T ss_dssp             HHHHHHHHHTSCCS
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999876543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=2.6e-15  Score=86.71  Aligned_cols=66  Identities=24%  Similarity=0.522  Sum_probs=57.7

Q ss_pred             ccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHH
Q 031430           23 GETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGG  102 (159)
Q Consensus        23 ~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~  102 (159)
                      ...+.++++|.|..|++.|.....|..|++.|.+                         +++|.|.+||+.|.+...|..
T Consensus         9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-------------------------~~~~~C~~C~k~f~~~~~L~~   63 (74)
T 2lce_A            9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG-------------------------EKPYRCNICGAQFNRPANLKT   63 (74)
T ss_dssp             --CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-------------------------CCSEECTTTCCEESCHHHHHH
T ss_pred             ccccCCCCCeECCCCCceeCCHHHHHHHHHHcCC-------------------------CCCEECCCCCchhCCHHHHHH
Confidence            3567889999999999999999999999998864                         356788889999999999999


Q ss_pred             HHHHcccccCC
Q 031430          103 HMRRHRAAAAM  113 (159)
Q Consensus       103 H~~~h~~~~~~  113 (159)
                      |+++|++++||
T Consensus        64 H~~~H~~~kp~   74 (74)
T 2lce_A           64 HTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHCCSCCC
T ss_pred             HHHhcCCCCCC
Confidence            99999999875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.1e-15  Score=87.77  Aligned_cols=69  Identities=28%  Similarity=0.523  Sum_probs=59.9

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHH
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALG  101 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~  101 (159)
                      +...+.++++|.|.+|++.|.....|..|++.|.+                         +++|.|.+|++.|.....|.
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------------~~~~~C~~C~~~f~~~~~L~   63 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-------------------------EKPYKCDECGKAFIQRSHLI   63 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC-------------------------SCSEECSSSCCEESSHHHHH
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCC-------------------------CcCeeCCCCCCccCCHHHHH
Confidence            34567789999999999999999999999887753                         46688888999999999999


Q ss_pred             HHHHHcccccCCCc
Q 031430          102 GHMRRHRAAAAMGA  115 (159)
Q Consensus       102 ~H~~~h~~~~~~~~  115 (159)
                      .|+++|+++++|.|
T Consensus        64 ~H~~~H~~~~p~~C   77 (77)
T 2cot_A           64 GHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHGGGSCCCCCCCC
T ss_pred             HHHHHhCCCCCCCC
Confidence            99999999998865

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=4.1e-15  Score=84.94  Aligned_cols=65  Identities=18%  Similarity=0.332  Sum_probs=57.9

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHH
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHM  104 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~  104 (159)
                      +|+++++|.|..|++.|.....|..|++.|.+                         +++|.|.+|++.|.+...|..|+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-------------------------~~~~~C~~C~~~f~~~~~L~~H~   57 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT-------------------------DRPFKCNYCSFDTKQPSNLSKHM   57 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC-------------------------SCSEECSSSSCEESSHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-------------------------CCCEeCCCCCCccCCHHHHHHHH
Confidence            68899999999999999999999999988864                         35678888999999999999999


Q ss_pred             HHcccccCCC
Q 031430          105 RRHRAAAAMG  114 (159)
Q Consensus       105 ~~h~~~~~~~  114 (159)
                      ++|+++++..
T Consensus        58 ~~h~~~~p~p   67 (70)
T 1x5w_A           58 KKFHGDMSGP   67 (70)
T ss_dssp             HHHHSSSCCS
T ss_pred             HHHhCCCCCC
Confidence            9999987753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.5e-15  Score=91.23  Aligned_cols=76  Identities=18%  Similarity=0.225  Sum_probs=63.2

Q ss_pred             chHHHHHHHHhhccccCCCceeecccccccC-CChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccc
Q 031430           11 DTANCLMLLSKVGETDQGKRVFACKTCNKEF-PSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSI   89 (159)
Q Consensus        11 ~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f-~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~   89 (159)
                      ..+.....|..|+++|.++++|.|+.|++.| .....|..|++.| ++                         ++|.|.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~-------------------------k~~~C~~   67 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQ-------------------------EMFTCHH   67 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CC-------------------------CCCCCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CC-------------------------CCeECCC
Confidence            3444556678888999999999999999999 9999999999888 64                         4567788


Q ss_pred             cccccCChhHHHHH-HHHcccccC
Q 031430           90 CGLEFAIGQALGGH-MRRHRAAAA  112 (159)
Q Consensus        90 Cgk~f~~~~~l~~H-~~~h~~~~~  112 (159)
                      ||+.|.+.+.|..| +++|+++..
T Consensus        68 Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           68 CGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCeeCCHHHHHHHhHHhcCCCCC
Confidence            89999999999999 899986543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=3.1e-15  Score=87.18  Aligned_cols=69  Identities=19%  Similarity=0.368  Sum_probs=58.7

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHH
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHM  104 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~  104 (159)
                      +|+++++|.|.+|++.|.....|..|++.|.++                      .++++|.|.+||+.|.....|..|+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~----------------------~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAET----------------------VAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHH----------------------TTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc----------------------CCCcccCCCCCCchhCCHHHHHHHH
Confidence            489999999999999999999999999998752                      1357799999999999999999999


Q ss_pred             -HHcccccCCCc
Q 031430          105 -RRHRAAAAMGA  115 (159)
Q Consensus       105 -~~h~~~~~~~~  115 (159)
                       ..|.++.+...
T Consensus        59 ~~~H~~~~~~~~   70 (78)
T 2d9h_A           59 SKSHPALLLAPQ   70 (78)
T ss_dssp             HHTSTTTSSCCS
T ss_pred             HHhCCCCCCCcc
Confidence             56666666544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.57  E-value=9.4e-18  Score=100.33  Aligned_cols=81  Identities=15%  Similarity=0.206  Sum_probs=70.4

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCC---CCCCCcccccccccccCChhHHHHHHH
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPAS---PRKPKTHECSICGLEFAIGQALGGHMR  105 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~---~~~~k~~~C~~Cgk~f~~~~~l~~H~~  105 (159)
                      ++||.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|..+   |. ..+|.|..|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-~~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC-CCcchHHHHHHHHHHHhhhHHHHH
Confidence            57999999999999999999999999999999999999999886555321   22 478999999999999999999998


Q ss_pred             Hcccc
Q 031430          106 RHRAA  110 (159)
Q Consensus       106 ~h~~~  110 (159)
                      .+.+.
T Consensus        80 ~~h~~   84 (88)
T 1llm_C           80 RLKKL   84 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=5.8e-15  Score=90.40  Aligned_cols=71  Identities=17%  Similarity=0.279  Sum_probs=61.8

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHH-hcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHH
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRA-SHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGH  103 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H  103 (159)
                      .-.|++||.|..|++.|...+.|..|++ .|++.                      .+++||.|.+||+.|...+.|..|
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~----------------------~~ekpf~C~~Cgk~F~~~~~L~~H   69 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV----------------------VLNSSYVCVECNFLTKRYDALSEH   69 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC----------------------CCSCCEEETTTTEEESSTHHHHTH
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC----------------------CCCCCcCCCCCCcccCCHHHHHHH
Confidence            3478999999999999999999999997 47541                      235789999999999999999999


Q ss_pred             -HHHcccccCCCccc
Q 031430          104 -MRRHRAAAAMGAVA  117 (159)
Q Consensus       104 -~~~h~~~~~~~~~~  117 (159)
                       +++|++++||.|..
T Consensus        70 ~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           70 NLKYHPGEENFKLTM   84 (102)
T ss_dssp             HHHTSTTCCCEEEEE
T ss_pred             HHHhcCCCCCeeCCc
Confidence             89999999998865

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=1.2e-14  Score=86.04  Aligned_cols=64  Identities=19%  Similarity=0.324  Sum_probs=54.1

Q ss_pred             ccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHH
Q 031430           23 GETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGG  102 (159)
Q Consensus        23 ~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~  102 (159)
                      +.++.+.++|.|++|++.|.....|..|+++|+++                         +||.|.+|++.|.+...|..
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~-------------------------k~~~C~~C~k~F~~~~~L~~   74 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAA-------------------------QVFPCKYCPATFYSSPGLTR   74 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCS-------------------------SSEECTTSSCEESSHHHHHH
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCC-------------------------CccCCCCCCCEeCCHHHHHH
Confidence            35667788999999999999999999999888754                         56778889999999999999


Q ss_pred             HH-HHccccc
Q 031430          103 HM-RRHRAAA  111 (159)
Q Consensus       103 H~-~~h~~~~  111 (159)
                      |+ ++|.+++
T Consensus        75 H~~~~H~~E~   84 (85)
T 2lv2_A           75 HINKCHPSEN   84 (85)
T ss_dssp             HHHTTCTTCC
T ss_pred             hCcccCcCCC
Confidence            97 5787764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.5e-14  Score=81.49  Aligned_cols=63  Identities=24%  Similarity=0.521  Sum_probs=55.0

Q ss_pred             ccccCCCceeecccccccCCChHHHHHhHHh-cCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHH
Q 031430           23 GETDQGKRVFACKTCNKEFPSFQALGGHRAS-HKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALG  101 (159)
Q Consensus        23 ~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~  101 (159)
                      +++|+++++|.|+.|++.|.....|..|++. |.                        .++++|.|+.||+.|.+.+.|.
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~------------------------~~~~~~~C~~C~k~f~~~~~L~   57 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK------------------------RNVKVYPCPFCFKEFTRKDNMT   57 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS------------------------SSCCCEECTTTCCEESCHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcC------------------------CCCcCeECCCCCCccCCHHHHH
Confidence            4689999999999999999999999999987 52                        1346788999999999999999


Q ss_pred             HHHHHccc
Q 031430          102 GHMRRHRA  109 (159)
Q Consensus       102 ~H~~~h~~  109 (159)
                      .|+++|++
T Consensus        58 ~H~~~~H~   65 (66)
T 2drp_A           58 AHVKIIHK   65 (66)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHcC
Confidence            99998875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.51  E-value=1.1e-15  Score=90.30  Aligned_cols=75  Identities=16%  Similarity=0.259  Sum_probs=63.0

Q ss_pred             eeec--ccccccCCChHHHHHhHHhcCCCCccccCC--CCCCCCCCCCCC---CCCCCCCcccccc---cccccCChhHH
Q 031430           31 VFAC--KTCNKEFPSFQALGGHRASHKKPKLMTMAS--SGEDFDQTQMPP---ASPRKPKTHECSI---CGLEFAIGQAL  100 (159)
Q Consensus        31 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~---~~~~~~k~~~C~~---Cgk~f~~~~~l  100 (159)
                      ||.|  +.|++.|.....|..|++.|.++++|.|..  |++.|.....|.   +.|.+   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5888  889999999999999999998889999988  999888755553   22334   89999   99999999999


Q ss_pred             HHHHHHcc
Q 031430          101 GGHMRRHR  108 (159)
Q Consensus       101 ~~H~~~h~  108 (159)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=2.4e-16  Score=90.57  Aligned_cols=67  Identities=16%  Similarity=0.171  Sum_probs=49.5

Q ss_pred             HHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           46 ALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        46 ~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      .|..|++.|.++++|.|..|++.|.....|..    +++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~----~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR----RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC----SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc----CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCC
Confidence            34556666666677777777777766666643    67888888888888888888888888888887664

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.3e-13  Score=80.25  Aligned_cols=69  Identities=26%  Similarity=0.486  Sum_probs=55.2

Q ss_pred             CCCceeeccc--ccccCCChHHHHHhHH-hcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccc--cccccCChhHHH
Q 031430           27 QGKRVFACKT--CNKEFPSFQALGGHRA-SHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSI--CGLEFAIGQALG  101 (159)
Q Consensus        27 ~~~k~~~C~~--C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~--Cgk~f~~~~~l~  101 (159)
                      +++++|.|..  |++.|.....|..|++ .|.++                         ++|.|.+  |++.|.+...|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~-------------------------~~~~C~~~~C~k~f~~~~~L~   57 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ-------------------------KSFSCPEPACGKSFNFKKHLK   57 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSC-------------------------CCEECSCTTTCCEESSHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCC-------------------------CCeECCCCCCcCccCCHHHHH
Confidence            5788999987  9999999999999998 57654                         4456666  888888899999


Q ss_pred             HHHHHcccccCCCccccCC
Q 031430          102 GHMRRHRAAAAMGAVADGL  120 (159)
Q Consensus       102 ~H~~~h~~~~~~~~~~~~~  120 (159)
                      .|+++|+++++|.|..++.
T Consensus        58 ~H~~~H~~~~~~~C~~C~k   76 (79)
T 2dlk_A           58 EHMKLHSDTRDYICEFSGP   76 (79)
T ss_dssp             HHHHHHHTSCCCSCCSSSC
T ss_pred             HHHHHhCCCCCeeCCCCCC
Confidence            9999998888886544433

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.47  E-value=5.5e-14  Score=76.79  Aligned_cols=57  Identities=30%  Similarity=0.449  Sum_probs=47.1

Q ss_pred             CCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHHHc
Q 031430           28 GKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        28 ~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      |+++|.|..|++.|.....|..|++.|.++                         ++|.|.+|++.|.....|..|+++|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGE-------------------------KPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCC-------------------------CCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCC-------------------------CCcCCCCCcchhCCHHHHHHHHHHh
Confidence            568999999999999999999999988753                         5678888999999999999999988


Q ss_pred             cc
Q 031430          108 RA  109 (159)
Q Consensus       108 ~~  109 (159)
                      ++
T Consensus        56 h~   57 (57)
T 3uk3_C           56 HK   57 (57)
T ss_dssp             C-
T ss_pred             cC
Confidence            64

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.45  E-value=1e-14  Score=89.77  Aligned_cols=79  Identities=20%  Similarity=0.254  Sum_probs=68.5

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTH   85 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~   85 (159)
                      ....|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|.   +.|.++++|
T Consensus        23 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           23 CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             SCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             CCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence            34556677889999999999999999999999999999999999999999999999999998855553   457778887


Q ss_pred             cc
Q 031430           86 EC   87 (159)
Q Consensus        86 ~C   87 (159)
                      .+
T Consensus       103 ~~  104 (106)
T 2ee8_A          103 TA  104 (106)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8.1e-14  Score=72.84  Aligned_cols=45  Identities=29%  Similarity=0.512  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.44  E-value=8e-14  Score=72.87  Aligned_cols=45  Identities=22%  Similarity=0.426  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            588999999999999999999999999999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.44  E-value=8.3e-14  Score=72.84  Aligned_cols=45  Identities=27%  Similarity=0.476  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=8.4e-14  Score=72.77  Aligned_cols=45  Identities=27%  Similarity=0.400  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=8.9e-14  Score=71.99  Aligned_cols=44  Identities=27%  Similarity=0.419  Sum_probs=42.1

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      |+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.6e-14  Score=72.97  Aligned_cols=45  Identities=27%  Similarity=0.454  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1e-13  Score=72.44  Aligned_cols=45  Identities=27%  Similarity=0.491  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=8.9e-14  Score=72.69  Aligned_cols=45  Identities=27%  Similarity=0.491  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=9.5e-14  Score=72.61  Aligned_cols=45  Identities=27%  Similarity=0.461  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.43  E-value=8.7e-14  Score=72.70  Aligned_cols=45  Identities=27%  Similarity=0.409  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.1e-13  Score=72.32  Aligned_cols=45  Identities=27%  Similarity=0.465  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.43  E-value=9.1e-14  Score=72.66  Aligned_cols=45  Identities=24%  Similarity=0.468  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.42  E-value=2.6e-13  Score=74.04  Aligned_cols=56  Identities=20%  Similarity=0.462  Sum_probs=50.0

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ||.|+.|++.|.....|..|++.|.++                         ++|.|..||+.|.+...|..|+++|.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDV-------------------------RPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSC-------------------------CCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCC-------------------------CCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            689999999999999999999988754                         4678888999999999999999999887


Q ss_pred             c
Q 031430          111 A  111 (159)
Q Consensus       111 ~  111 (159)
                      +
T Consensus        56 k   56 (57)
T 1bbo_A           56 K   56 (57)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.8e-14  Score=73.46  Aligned_cols=45  Identities=27%  Similarity=0.471  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.5e-14  Score=72.58  Aligned_cols=45  Identities=24%  Similarity=0.449  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.2e-14  Score=72.60  Aligned_cols=45  Identities=24%  Similarity=0.417  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.8e-14  Score=72.53  Aligned_cols=45  Identities=24%  Similarity=0.445  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.1e-13  Score=72.31  Aligned_cols=45  Identities=24%  Similarity=0.449  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.4e-14  Score=72.57  Aligned_cols=45  Identities=24%  Similarity=0.466  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.2e-13  Score=72.18  Aligned_cols=45  Identities=20%  Similarity=0.352  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.1e-13  Score=72.37  Aligned_cols=45  Identities=24%  Similarity=0.444  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.1e-13  Score=72.35  Aligned_cols=45  Identities=22%  Similarity=0.372  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1e-13  Score=72.49  Aligned_cols=45  Identities=24%  Similarity=0.443  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.3e-13  Score=72.02  Aligned_cols=45  Identities=22%  Similarity=0.428  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.42  E-value=1.1e-13  Score=72.35  Aligned_cols=45  Identities=29%  Similarity=0.466  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.2e-13  Score=72.12  Aligned_cols=45  Identities=29%  Similarity=0.517  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.1e-13  Score=72.23  Aligned_cols=45  Identities=24%  Similarity=0.353  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=8.4e-14  Score=72.82  Aligned_cols=45  Identities=20%  Similarity=0.366  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.5e-13  Score=71.89  Aligned_cols=45  Identities=27%  Similarity=0.423  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=71.88  Aligned_cols=45  Identities=24%  Similarity=0.433  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=8.5e-14  Score=72.76  Aligned_cols=45  Identities=27%  Similarity=0.456  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|..|++.|...+.|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.3e-13  Score=72.08  Aligned_cols=45  Identities=24%  Similarity=0.486  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|.+|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.5e-14  Score=72.59  Aligned_cols=45  Identities=24%  Similarity=0.516  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=7.6e-14  Score=81.28  Aligned_cols=62  Identities=18%  Similarity=0.208  Sum_probs=56.5

Q ss_pred             ccchHHHHHHHHhhcc-ccCCCceeeccc--ccccCCChHHHHHhHHhcCCCCccccCCCCCCCC
Q 031430            9 AIDTANCLMLLSKVGE-TDQGKRVFACKT--CNKEFPSFQALGGHRASHKKPKLMTMASSGEDFD   70 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~-~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~   70 (159)
                      ....|.....|..|++ +|.++++|.|+.  |++.|.....|..|++.|+++++|.|..|++.|.
T Consensus        15 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             TCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            3456777889999999 899999999999  9999999999999999999999999999999873

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.41  E-value=6.1e-13  Score=80.09  Aligned_cols=71  Identities=20%  Similarity=0.229  Sum_probs=60.0

Q ss_pred             CceeecccccccCCChHHHHHhHHh-cCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHHHc
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRAS-HKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      ...|.|..|++.|.....|..|++. |.++++..+..|                 ++|.|.+||+.|.+...|..|+++|
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-----------------~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-----------------YWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-----------------CCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccce-----------------eccCCCCCCcccCCHHHHHHHHHhc
Confidence            3457899999999999999999998 887765443322                 3489999999999999999999999


Q ss_pred             ccccCCCcc
Q 031430          108 RAAAAMGAV  116 (159)
Q Consensus       108 ~~~~~~~~~  116 (159)
                      +++++|.|.
T Consensus        86 ~~~k~~~C~   94 (95)
T 2ej4_A           86 TGEKSGPSS   94 (95)
T ss_dssp             HTCCCCSSC
T ss_pred             CCCCCCCCC
Confidence            999999874

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.8e-13  Score=71.54  Aligned_cols=45  Identities=27%  Similarity=0.448  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=8.7e-14  Score=72.73  Aligned_cols=45  Identities=27%  Similarity=0.507  Sum_probs=43.0

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.41  E-value=1.6e-13  Score=71.69  Aligned_cols=45  Identities=27%  Similarity=0.451  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            488999999999999999999999999999999999999999877

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.41  E-value=1.2e-13  Score=87.85  Aligned_cols=79  Identities=11%  Similarity=0.081  Sum_probs=51.7

Q ss_pred             CceeecccccccCC------ChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCcccccccccccCChhH
Q 031430           29 KRVFACKTCNKEFP------SFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQA   99 (159)
Q Consensus        29 ~k~~~C~~C~~~f~------~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~   99 (159)
                      ++.+.|++|++.|.      ....|..|+ .|+++++|.|..||+.|.....|.   +.|  ++||.|.+||+.|.+.+.
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHH
Confidence            44555555544433      334444444 455566666666666666544332   123  577899999999999999


Q ss_pred             HHHHHHHcccc
Q 031430          100 LGGHMRRHRAA  110 (159)
Q Consensus       100 l~~H~~~h~~~  110 (159)
                      |..|+++|++.
T Consensus       116 l~~H~~~h~~~  126 (129)
T 2wbt_A          116 ALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHHHCCc
Confidence            99999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.2e-13  Score=72.16  Aligned_cols=45  Identities=24%  Similarity=0.491  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.7e-13  Score=71.56  Aligned_cols=45  Identities=20%  Similarity=0.360  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.3e-13  Score=72.04  Aligned_cols=45  Identities=27%  Similarity=0.439  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.40  E-value=2.1e-13  Score=71.23  Aligned_cols=45  Identities=24%  Similarity=0.408  Sum_probs=42.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=72.28  Aligned_cols=45  Identities=24%  Similarity=0.440  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8.9e-14  Score=72.69  Aligned_cols=45  Identities=27%  Similarity=0.487  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.7e-13  Score=71.59  Aligned_cols=45  Identities=24%  Similarity=0.433  Sum_probs=42.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999864

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.5e-13  Score=71.79  Aligned_cols=45  Identities=22%  Similarity=0.435  Sum_probs=42.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999877

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.40  E-value=5.6e-14  Score=77.74  Aligned_cols=51  Identities=22%  Similarity=0.220  Sum_probs=46.5

Q ss_pred             cccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430            8 AAIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus         8 ~~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +..+.|.....|..|+++|+|++||.|++||+.|...+.|..|+++|+|+.
T Consensus         9 ~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            9 FCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             TTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            445678889999999999999999999999999999999999999999864

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.6e-13  Score=71.68  Aligned_cols=45  Identities=24%  Similarity=0.522  Sum_probs=42.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.6e-13  Score=71.79  Aligned_cols=45  Identities=20%  Similarity=0.411  Sum_probs=42.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999876

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.39  E-value=8.9e-14  Score=83.95  Aligned_cols=75  Identities=13%  Similarity=0.087  Sum_probs=64.1

Q ss_pred             cchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCc
Q 031430           10 IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKT   84 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~   84 (159)
                      ...|.....|..|+++|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|.   +.|.++++
T Consensus        15 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           15 GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            3456667889999999999999999999999999999999999999999999999999998854443   44555543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=9.2e-15  Score=83.84  Aligned_cols=66  Identities=20%  Similarity=0.110  Sum_probs=57.8

Q ss_pred             HHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CCCCCCCccccccc
Q 031430           18 LLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP---ASPRKPKTHECSIC   90 (159)
Q Consensus        18 ~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~~~~~k~~~C~~C   90 (159)
                      .|..|+++|.++++|.|..|++.|.....|..       +++|.|..|++.|.....|.   +.|.++++|.|++|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            46789999999999999999999998888765       68999999999999877765   45778999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.2e-13  Score=71.15  Aligned_cols=45  Identities=24%  Similarity=0.443  Sum_probs=42.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999877

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.2e-13  Score=70.77  Aligned_cols=45  Identities=27%  Similarity=0.408  Sum_probs=42.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHH-hcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRA-SHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++ .|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47899999999999999999999999999999 9999999999876

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.4e-13  Score=70.02  Aligned_cols=45  Identities=29%  Similarity=0.473  Sum_probs=42.4

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.36  E-value=1.2e-13  Score=76.97  Aligned_cols=55  Identities=9%  Similarity=0.219  Sum_probs=48.8

Q ss_pred             HHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC
Q 031430           19 LSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP   76 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~   76 (159)
                      |..|+++|++++||.|+.|++.|.....|.   +.|.++++|.|..||+.|.....+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            567899999999999999999999888876   7899999999999999998766653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.9e-13  Score=76.07  Aligned_cols=61  Identities=28%  Similarity=0.539  Sum_probs=53.3

Q ss_pred             ccccCCCceeecc--cccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHH
Q 031430           23 GETDQGKRVFACK--TCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQAL  100 (159)
Q Consensus        23 ~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l  100 (159)
                      ..+|.++++|.|+  .|++.|.....|..|++.|.++                         ++|.|.+||+.|.+.+.|
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~-------------------------~~~~C~~C~~~f~~~~~l   65 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQ-------------------------KPFQCRICMRNFSRSDHL   65 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCC-------------------------CCEECTTTCCEESCHHHH
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCC-------------------------CCeECCCCCchhCCHHHH
Confidence            4578999999997  5999999999999999988653                         567788899999999999


Q ss_pred             HHHHHHcc
Q 031430          101 GGHMRRHR  108 (159)
Q Consensus       101 ~~H~~~h~  108 (159)
                      ..|+++|+
T Consensus        66 ~~H~~~Ht   73 (73)
T 1f2i_G           66 TTHIRTHT   73 (73)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHHhcC
Confidence            99999884

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.36  E-value=1.9e-14  Score=85.91  Aligned_cols=67  Identities=18%  Similarity=0.298  Sum_probs=60.8

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      ....|.....|..|+++|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus        12 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A           12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDER   78 (90)
T ss_dssp             CCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             CCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHH
Confidence            3456777889999999999999999999999999999999999999999999999999999875554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1e-12  Score=72.46  Aligned_cols=56  Identities=29%  Similarity=0.576  Sum_probs=48.7

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHH-HHcc
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHM-RRHR  108 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~-~~h~  108 (159)
                      +||.|+.|++.|.....|..|++.|.++                         ++|.|..||+.|.+...|..|+ ++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE-------------------------KPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS-------------------------CSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCC-------------------------CCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            5899999999999999999999887643                         5678888999999999999997 6787


Q ss_pred             cc
Q 031430          109 AA  110 (159)
Q Consensus       109 ~~  110 (159)
                      ++
T Consensus        56 ~~   57 (60)
T 2adr_A           56 GN   57 (60)
T ss_dssp             CS
T ss_pred             Cc
Confidence            65

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.35  E-value=5.6e-13  Score=69.61  Aligned_cols=44  Identities=27%  Similarity=0.490  Sum_probs=41.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.35  E-value=6.8e-13  Score=67.84  Aligned_cols=42  Identities=19%  Similarity=0.354  Sum_probs=39.8

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      |+++|+++++|.|++|++.|...+.|..|++.|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678999999999999999999999999999999999999884

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=1.1e-12  Score=70.85  Aligned_cols=48  Identities=17%  Similarity=0.291  Sum_probs=44.2

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHH-hcCCCCccccCCCCCCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRA-SHKKPKLMTMASSGEDFDQ   71 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c~~~f~~   71 (159)
                      ..|+++++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            46889999999999999999999999997 8999999999999998864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=6.2e-13  Score=69.39  Aligned_cols=44  Identities=27%  Similarity=0.477  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=6.5e-13  Score=69.34  Aligned_cols=44  Identities=32%  Similarity=0.512  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48899999999999999999999999999999999999999964

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.4e-13  Score=69.62  Aligned_cols=44  Identities=27%  Similarity=0.535  Sum_probs=41.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|.+|++.|...+.|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=7e-13  Score=69.16  Aligned_cols=44  Identities=27%  Similarity=0.521  Sum_probs=41.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|+.|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.6e-13  Score=67.24  Aligned_cols=42  Identities=17%  Similarity=0.352  Sum_probs=39.7

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      |+++|++++||.|++|++.|...+.|..|++.|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            678999999999999999999999999999999999999883

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.2e-13  Score=68.96  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|.+|++.|...+.|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999964

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=7.4e-13  Score=69.10  Aligned_cols=44  Identities=25%  Similarity=0.490  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=68.53  Aligned_cols=44  Identities=27%  Similarity=0.537  Sum_probs=41.4

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.3e-13  Score=68.94  Aligned_cols=44  Identities=27%  Similarity=0.517  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|.+|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.3e-13  Score=68.87  Aligned_cols=44  Identities=27%  Similarity=0.476  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|+.|++.|.....|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=9.2e-13  Score=68.69  Aligned_cols=44  Identities=23%  Similarity=0.419  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|+.|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=68.53  Aligned_cols=44  Identities=27%  Similarity=0.487  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|..|++.|...+.|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            48899999999999999999999999999999999999999864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1e-12  Score=68.57  Aligned_cols=44  Identities=25%  Similarity=0.392  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48899999999999999999999999999999999999999964

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.4e-13  Score=68.86  Aligned_cols=44  Identities=27%  Similarity=0.487  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58899999999999999999999999999999999999999864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.9e-13  Score=68.81  Aligned_cols=44  Identities=25%  Similarity=0.480  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|++++||.|.+|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.7e-13  Score=68.66  Aligned_cols=44  Identities=27%  Similarity=0.513  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|..|++.|...+.|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7.9e-13  Score=68.98  Aligned_cols=44  Identities=27%  Similarity=0.505  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|+.|++.|.....|..|++.|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.1e-12  Score=68.46  Aligned_cols=44  Identities=25%  Similarity=0.441  Sum_probs=41.6

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      ++++|+++++|.|++|++.|.....|..|++.|+++++|.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46799999999999999999999999999999999999999876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=1.3e-12  Score=67.84  Aligned_cols=43  Identities=23%  Similarity=0.400  Sum_probs=41.1

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSG   66 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~   66 (159)
                      ..|+++++|.|.+|++.|.....|..|++.|+++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5799999999999999999999999999999999999999986

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1e-12  Score=68.63  Aligned_cols=44  Identities=23%  Similarity=0.459  Sum_probs=41.3

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999964

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.9e-13  Score=68.60  Aligned_cols=44  Identities=25%  Similarity=0.505  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.1e-12  Score=67.66  Aligned_cols=43  Identities=21%  Similarity=0.444  Sum_probs=40.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|+++++|.|+.|++.|.....|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999884

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.9e-13  Score=68.58  Aligned_cols=44  Identities=25%  Similarity=0.460  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999964

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.9e-15  Score=94.42  Aligned_cols=77  Identities=6%  Similarity=-0.048  Sum_probs=56.7

Q ss_pred             HHHHHhHHhcCCCCccccCCCCCCCCCCCCCC---CC--CCCCCcc-ccccccccc--CChhHHHHHHHHcccccCCCcc
Q 031430           45 QALGGHRASHKKPKLMTMASSGEDFDQTQMPP---AS--PRKPKTH-ECSICGLEF--AIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        45 ~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~---~~--~~~~k~~-~C~~Cgk~f--~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|..|++.|+++++|.|..|++.|.....|.   +.  |.+.+++ .|.+|++.|  .....|..|+++|.++++|.|.
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            45677888888889999999999888754443   22  4445544 488999888  8888899999889888887554


Q ss_pred             ccCCc
Q 031430          117 ADGLV  121 (159)
Q Consensus       117 ~~~~~  121 (159)
                      .++..
T Consensus        85 ~C~k~   89 (115)
T 2dmi_A           85 YCGHS   89 (115)
T ss_dssp             SSCCB
T ss_pred             CCCCc
Confidence            44444

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.4e-12  Score=68.10  Aligned_cols=44  Identities=30%  Similarity=0.532  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|.+|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999964

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1e-12  Score=67.85  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=40.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999884

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=8.9e-13  Score=67.35  Aligned_cols=42  Identities=19%  Similarity=0.319  Sum_probs=39.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            378899999999999999999999999999999999999887

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.2e-12  Score=67.65  Aligned_cols=43  Identities=21%  Similarity=0.448  Sum_probs=40.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|++++||.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4789999999999999999999999999999999999999884

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1e-12  Score=68.48  Aligned_cols=44  Identities=25%  Similarity=0.452  Sum_probs=41.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|..|++.|...+.|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48899999999999999999999999999999999999999964

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1e-12  Score=68.62  Aligned_cols=44  Identities=25%  Similarity=0.488  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.1e-12  Score=67.79  Aligned_cols=43  Identities=21%  Similarity=0.417  Sum_probs=40.7

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|+++++|.|++|++.|...+.|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999999884

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.30  E-value=1.8e-12  Score=66.16  Aligned_cols=41  Identities=20%  Similarity=0.354  Sum_probs=39.2

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      |+++|+++++|.|++|++.|...+.|..|++.|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67899999999999999999999999999999999999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.8e-12  Score=67.64  Aligned_cols=44  Identities=25%  Similarity=0.515  Sum_probs=41.2

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|.+|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999864

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.5e-12  Score=66.60  Aligned_cols=41  Identities=20%  Similarity=0.430  Sum_probs=39.2

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      |+++|++++||.|++|++.|...+.|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67899999999999999999999999999999999999887

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.9e-12  Score=66.80  Aligned_cols=43  Identities=16%  Similarity=0.363  Sum_probs=40.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5889999999999999999999999999999999999999884

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.5e-12  Score=72.36  Aligned_cols=61  Identities=28%  Similarity=0.543  Sum_probs=50.9

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCccccc-ccccccCChhHHHHH
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECS-ICGLEFAIGQALGGH  103 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~-~Cgk~f~~~~~l~~H  103 (159)
                      .+.+++||.|..|++.|. ...|..|++. .++                         +||.|+ +||+.|...+.|..|
T Consensus         4 ~~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~-------------------------~p~~C~~~C~k~f~~~~~L~~H   56 (66)
T 2eod_A            4 GSSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPR-------------------------LPVACPNQCGVGTVAREDLPGH   56 (66)
T ss_dssp             SCCCCCEEECSSSCCEEE-HHHHHHHHHH-CSS-------------------------SEEECTTCCSCCEEETTTHHHH
T ss_pred             ccCCCCCeeccccCCccC-HHHHHHHHHH-cCC-------------------------cCccCCcccCcccccHHHHHHH
Confidence            356789999999999999 9999999887 544                         456777 788888888899999


Q ss_pred             HHHcccccC
Q 031430          104 MRRHRAAAA  112 (159)
Q Consensus       104 ~~~h~~~~~  112 (159)
                      +++|....+
T Consensus        57 ~~~hc~~~~   65 (66)
T 2eod_A           57 LKDSCNTAL   65 (66)
T ss_dssp             HHTTSSSCC
T ss_pred             HHhhcccCc
Confidence            999987754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.29  E-value=4.9e-13  Score=78.19  Aligned_cols=66  Identities=20%  Similarity=0.220  Sum_probs=59.5

Q ss_pred             cchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430           10 IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      ...|.....|..|+++|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus         8 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            8 GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            345666788999999999999999999999999999999999999999999999999999875444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.6e-12  Score=67.81  Aligned_cols=44  Identities=25%  Similarity=0.472  Sum_probs=41.2

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCC-CCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKK-PKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~-~~~~~c~~   64 (159)
                      .|+++|++++||.|+.|++.|.....|..|++.|++ +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999999999999999 99999863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.4e-12  Score=68.01  Aligned_cols=44  Identities=27%  Similarity=0.507  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|+.|++.|...+.|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=66.98  Aligned_cols=41  Identities=20%  Similarity=0.389  Sum_probs=39.3

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      |+++|++++||.|+.|++.|.....|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            78899999999999999999999999999999999999887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.2e-12  Score=68.36  Aligned_cols=44  Identities=32%  Similarity=0.553  Sum_probs=41.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999999999999999999999864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.4e-12  Score=68.02  Aligned_cols=44  Identities=25%  Similarity=0.510  Sum_probs=41.3

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      .+++|+++++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35789999999999999999999999999999999999999876

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=3.2e-12  Score=67.29  Aligned_cols=44  Identities=25%  Similarity=0.443  Sum_probs=41.3

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGE   67 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~   67 (159)
                      ..|.++++|.|.+|++.|.....|..|++.|+++++|.|..|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            46788999999999999999999999999999999999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3e-12  Score=66.10  Aligned_cols=43  Identities=23%  Similarity=0.310  Sum_probs=40.4

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|+++++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3788999999999999999999999999999999999999884

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.27  E-value=1.9e-12  Score=77.84  Aligned_cols=66  Identities=18%  Similarity=0.300  Sum_probs=59.0

Q ss_pred             cchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCC--CccccCCCCCCCCCCCCC
Q 031430           10 IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKP--KLMTMASSGEDFDQTQMP   75 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~--~~~~c~~c~~~f~~~~~l   75 (159)
                      ...|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.++  ++|.|..|++.|.....|
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A           14 GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            345666778999999999999999999999999999999999999987  899999999999885554

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=67.42  Aligned_cols=43  Identities=19%  Similarity=0.430  Sum_probs=40.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|+++++|.|++|++.|.....|..|++.|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999873

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=68.08  Aligned_cols=43  Identities=26%  Similarity=0.439  Sum_probs=40.9

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .|+++|++++||.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.25  E-value=1.9e-13  Score=84.28  Aligned_cols=77  Identities=13%  Similarity=0.063  Sum_probs=65.7

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCC----CCCCCCCc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPP----ASPRKPKT   84 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~----~~~~~~k~   84 (159)
                      ....|.....|..|+++|  +++|.|.+|++.|.....|..|++ |.++++|.|..|++.|.....|.    ..|.++++
T Consensus        22 C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           22 CNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             TCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             CCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCC
Confidence            344566678899999999  479999999999999999999996 99999999999999999855553    37889999


Q ss_pred             cccc
Q 031430           85 HECS   88 (159)
Q Consensus        85 ~~C~   88 (159)
                      |.|.
T Consensus        99 ~~~~  102 (107)
T 1wjp_A           99 APTS  102 (107)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=1.6e-12  Score=80.32  Aligned_cols=66  Identities=18%  Similarity=0.167  Sum_probs=59.9

Q ss_pred             cchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430           10 IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      ...|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus        16 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A           16 GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            345666788999999999999999999999999999999999999999999999999999876555

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5e-12  Score=65.26  Aligned_cols=42  Identities=21%  Similarity=0.360  Sum_probs=39.8

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      .|+++|+++++|.|.+|++.|...+.|..|++.|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            478999999999999999999999999999999999999876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.6e-12  Score=66.20  Aligned_cols=44  Identities=32%  Similarity=0.521  Sum_probs=41.5

Q ss_pred             hccccCCCceeecc--cccccCCChHHHHHhHHhcCCCCccccCCC
Q 031430           22 VGETDQGKRVFACK--TCNKEFPSFQALGGHRASHKKPKLMTMASS   65 (159)
Q Consensus        22 h~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   65 (159)
                      |.++|+++++|.|.  .|++.|.....|..|++.|+++++|.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999998  899999999999999999999999999876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=4.4e-12  Score=73.43  Aligned_cols=54  Identities=24%  Similarity=0.300  Sum_probs=49.4

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      ..+.|.....|..|+++|.++++|.|++|++.|.....|..|++.|+++++|.|
T Consensus        24 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           24 CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345566688999999999999999999999999999999999999999999987

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.23  E-value=3.4e-12  Score=75.73  Aligned_cols=67  Identities=16%  Similarity=0.236  Sum_probs=59.8

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecc--cccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACK--TCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      ....|.....|..|+++|.++++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus        13 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A           13 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             TCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            345667788999999999999999997  6999999999999999999999999999999999875444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=8.3e-12  Score=65.05  Aligned_cols=43  Identities=28%  Similarity=0.396  Sum_probs=40.1

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      .+++|+++++|.|.+|++.|.....|..|++.|+++++|.|+.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4678999999999999999999999999999999999999964

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=9.7e-12  Score=63.86  Aligned_cols=41  Identities=20%  Similarity=0.353  Sum_probs=38.7

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      ++|+++++|.|..|++.|...+.|..|++.|+++++|.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57999999999999999999999999999999999999863

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.9e-12  Score=65.30  Aligned_cols=42  Identities=26%  Similarity=0.471  Sum_probs=39.7

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      +.++|+++++|.|.+|++.|.....|..|++.|+++++|.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            467899999999999999999999999999999999999986

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.2e-11  Score=62.79  Aligned_cols=39  Identities=26%  Similarity=0.458  Sum_probs=37.2

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      ++|+++++|.|++|++.|.....|..|++.|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            689999999999999999999999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.20  E-value=7.2e-12  Score=75.92  Aligned_cols=67  Identities=16%  Similarity=0.260  Sum_probs=59.9

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecc--cccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACK--TCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      ....|.....|..|+++|.++++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|
T Consensus        23 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             CCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            445677788999999999999999996  6999999999999999999999999999999999875444

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.16  E-value=4e-11  Score=68.40  Aligned_cols=60  Identities=28%  Similarity=0.452  Sum_probs=49.9

Q ss_pred             ccccCCCceeeccc--ccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCccccc--ccccccCChh
Q 031430           23 GETDQGKRVFACKT--CNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECS--ICGLEFAIGQ   98 (159)
Q Consensus        23 ~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~--~Cgk~f~~~~   98 (159)
                      ...+...++|.|..  |++.|.....|..|++.|.++++                         |.|.  .|++.|....
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-------------------------~~C~~~~C~k~f~~~~   63 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-------------------------FSCSWKGCERRFARSD   63 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-------------------------EECCCTTCCCEESSHH
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCC-------------------------ccCCCCCCCcccCCHH
Confidence            34567789999998  99999999999999999876544                         5553  4888999999


Q ss_pred             HHHHHHHHc
Q 031430           99 ALGGHMRRH  107 (159)
Q Consensus        99 ~l~~H~~~h  107 (159)
                      .|..|+++|
T Consensus        64 ~l~~H~~~H   72 (72)
T 2epa_A           64 ELSRHRRTH   72 (72)
T ss_dssp             HHHHHTTTC
T ss_pred             HHHhHhhcC
Confidence            999998876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.16  E-value=5.7e-11  Score=61.73  Aligned_cols=41  Identities=27%  Similarity=0.430  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.15  E-value=7e-11  Score=61.40  Aligned_cols=41  Identities=29%  Similarity=0.422  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=2e-11  Score=72.63  Aligned_cols=48  Identities=15%  Similarity=0.225  Sum_probs=43.4

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGED   68 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~   68 (159)
                      .+.++|+++++|.|++|++.|.....|..|++.|+++++|.|..|...
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~   62 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERR   62 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhH
Confidence            345779999999999999999999999999999999999999887654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.6e-11  Score=60.99  Aligned_cols=41  Identities=27%  Similarity=0.399  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.14  E-value=1.3e-12  Score=70.65  Aligned_cols=49  Identities=16%  Similarity=0.077  Sum_probs=43.4

Q ss_pred             HHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccc
Q 031430           13 ANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMT   61 (159)
Q Consensus        13 ~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   61 (159)
                      |.....|..|+++|+++++|.|.+|++.|...+.|..|++.|+++++|.
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3444557889999999999999999999999999999999999998863

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6e-11  Score=61.65  Aligned_cols=40  Identities=28%  Similarity=0.423  Sum_probs=37.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5688999999999999999999999999999999999885

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.9e-11  Score=61.70  Aligned_cols=41  Identities=24%  Similarity=0.430  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5e-11  Score=61.98  Aligned_cols=41  Identities=27%  Similarity=0.443  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998754

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.7e-11  Score=61.00  Aligned_cols=41  Identities=29%  Similarity=0.457  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56789999999999999999999999999999999998753

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.2e-11  Score=61.57  Aligned_cols=41  Identities=27%  Similarity=0.416  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|+++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.2e-11  Score=61.32  Aligned_cols=41  Identities=27%  Similarity=0.400  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.1e-11  Score=61.15  Aligned_cols=40  Identities=28%  Similarity=0.349  Sum_probs=37.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+|++.|.+.+.|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999874

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.9e-11  Score=61.43  Aligned_cols=41  Identities=24%  Similarity=0.352  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.14  E-value=8e-11  Score=61.18  Aligned_cols=41  Identities=32%  Similarity=0.552  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.14  E-value=4.8e-11  Score=70.47  Aligned_cols=52  Identities=27%  Similarity=0.447  Sum_probs=43.2

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccccCCccCCCCCCcchhccCCCCceeeeccCC
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNL  147 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  147 (159)
                      ..+...++|.|++||+.|.+...|..|+++|+++++|                   .|..|++.|....+|
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~-------------------~C~~C~k~F~~~~~L   72 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVF-------------------PCKYCPATFYSSPGL   72 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSE-------------------ECTTSSCEESSHHHH
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCcc-------------------CCCCCCCEeCCHHHH
Confidence            4455788999999999999999999999999999998                   556677777665554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6.8e-11  Score=61.48  Aligned_cols=41  Identities=24%  Similarity=0.378  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.9e-11  Score=61.17  Aligned_cols=41  Identities=27%  Similarity=0.410  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.5e-11  Score=61.05  Aligned_cols=41  Identities=34%  Similarity=0.537  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.8e-11  Score=61.21  Aligned_cols=41  Identities=32%  Similarity=0.421  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.1e-10  Score=60.57  Aligned_cols=41  Identities=27%  Similarity=0.384  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.13  E-value=1.7e-11  Score=70.40  Aligned_cols=52  Identities=17%  Similarity=0.266  Sum_probs=47.3

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCcc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLM   60 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   60 (159)
                      ..+.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+++++|
T Consensus        23 C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           23 CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3455667888999999999999999999999999999999999999998875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.6e-11  Score=59.93  Aligned_cols=39  Identities=18%  Similarity=0.305  Sum_probs=36.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.+++||.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            457889999999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7e-11  Score=61.38  Aligned_cols=41  Identities=22%  Similarity=0.392  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.7e-11  Score=60.78  Aligned_cols=41  Identities=27%  Similarity=0.386  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.1e-11  Score=61.11  Aligned_cols=41  Identities=27%  Similarity=0.439  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            56889999999999999999999999999999999998754

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.13  E-value=6.9e-11  Score=61.36  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.5e-11  Score=61.04  Aligned_cols=41  Identities=29%  Similarity=0.411  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.13  E-value=9e-11  Score=60.94  Aligned_cols=41  Identities=24%  Similarity=0.362  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            56889999999999999999999999999999999998753

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.5e-11  Score=60.82  Aligned_cols=41  Identities=32%  Similarity=0.509  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.8e-11  Score=61.17  Aligned_cols=41  Identities=32%  Similarity=0.485  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.12  E-value=7.2e-11  Score=61.33  Aligned_cols=41  Identities=24%  Similarity=0.426  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998754

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.1e-11  Score=60.92  Aligned_cols=41  Identities=24%  Similarity=0.388  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998754

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-10  Score=60.69  Aligned_cols=40  Identities=25%  Similarity=0.317  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=7e-11  Score=60.78  Aligned_cols=41  Identities=22%  Similarity=0.330  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.9e-11  Score=60.77  Aligned_cols=41  Identities=24%  Similarity=0.452  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9e-11  Score=60.95  Aligned_cols=41  Identities=32%  Similarity=0.473  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56789999999999999999999999999999999998754

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8e-11  Score=61.14  Aligned_cols=41  Identities=24%  Similarity=0.376  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-10  Score=60.39  Aligned_cols=41  Identities=32%  Similarity=0.425  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.4e-11  Score=61.31  Aligned_cols=40  Identities=33%  Similarity=0.429  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999874

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=7.2e-11  Score=61.33  Aligned_cols=41  Identities=24%  Similarity=0.354  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.1e-10  Score=60.57  Aligned_cols=41  Identities=24%  Similarity=0.402  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-10  Score=60.76  Aligned_cols=41  Identities=27%  Similarity=0.482  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=7.5e-11  Score=60.99  Aligned_cols=42  Identities=21%  Similarity=0.483  Sum_probs=38.3

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVAD  118 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~  118 (159)
                      ..|.++++|.|.+|++.|...+.|..|+++|++++++.|..+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            457889999999999999999999999999999999987654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-10  Score=60.61  Aligned_cols=41  Identities=24%  Similarity=0.378  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+|++.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.12  E-value=6.5e-11  Score=60.23  Aligned_cols=39  Identities=26%  Similarity=0.422  Sum_probs=36.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            467889999999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.2e-11  Score=60.87  Aligned_cols=41  Identities=27%  Similarity=0.465  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=9.1e-11  Score=60.96  Aligned_cols=41  Identities=29%  Similarity=0.562  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=7.4e-11  Score=61.27  Aligned_cols=41  Identities=27%  Similarity=0.417  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=8.5e-11  Score=61.04  Aligned_cols=41  Identities=24%  Similarity=0.366  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=8.7e-11  Score=61.00  Aligned_cols=41  Identities=24%  Similarity=0.362  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998754

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.2e-10  Score=60.44  Aligned_cols=41  Identities=27%  Similarity=0.454  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|++||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=7.5e-11  Score=61.26  Aligned_cols=41  Identities=22%  Similarity=0.358  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.2e-10  Score=60.52  Aligned_cols=41  Identities=24%  Similarity=0.377  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.1e-10  Score=59.99  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.+++||.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            568899999999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-10  Score=60.63  Aligned_cols=41  Identities=27%  Similarity=0.451  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.1e-10  Score=60.73  Aligned_cols=40  Identities=28%  Similarity=0.408  Sum_probs=37.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+|++.|.+...|..|+++|+++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            5678999999999999999999999999999999999875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.1e-10  Score=60.67  Aligned_cols=41  Identities=27%  Similarity=0.365  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=6.1e-11  Score=60.04  Aligned_cols=39  Identities=23%  Similarity=0.392  Sum_probs=36.0

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      ..|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            457889999999999999999999999999999998865

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-10  Score=60.52  Aligned_cols=41  Identities=27%  Similarity=0.453  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-10  Score=60.64  Aligned_cols=41  Identities=27%  Similarity=0.450  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=9.4e-11  Score=60.87  Aligned_cols=41  Identities=27%  Similarity=0.460  Sum_probs=37.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.10  E-value=1.3e-10  Score=60.39  Aligned_cols=41  Identities=24%  Similarity=0.278  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.10  E-value=1.1e-10  Score=59.86  Aligned_cols=40  Identities=13%  Similarity=0.204  Sum_probs=37.0

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|..||+.|.+.+.|..|+++|+++++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4578899999999999999999999999999999999874

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.10  E-value=9.2e-11  Score=60.87  Aligned_cols=41  Identities=27%  Similarity=0.414  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.3e-10  Score=60.37  Aligned_cols=40  Identities=28%  Similarity=0.477  Sum_probs=37.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=7.1e-11  Score=60.08  Aligned_cols=39  Identities=23%  Similarity=0.397  Sum_probs=36.3

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.+++||.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            568899999999999999999999999999999998865

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.5e-10  Score=60.05  Aligned_cols=40  Identities=25%  Similarity=0.358  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.1e-10  Score=60.58  Aligned_cols=40  Identities=28%  Similarity=0.554  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.10  E-value=1.6e-13  Score=76.48  Aligned_cols=50  Identities=10%  Similarity=0.166  Sum_probs=28.4

Q ss_pred             HhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChh
Q 031430           49 GHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQ   98 (159)
Q Consensus        49 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~   98 (159)
                      .|++.|+++++|.|+.||+.|.....|...|.+++||.|.+||+.|....
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCc
Confidence            45555666666666666666655444434455566666666666665443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.1e-10  Score=60.56  Aligned_cols=41  Identities=32%  Similarity=0.475  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.09  E-value=1e-10  Score=59.47  Aligned_cols=39  Identities=21%  Similarity=0.319  Sum_probs=36.3

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            568899999999999999999999999999999998865

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.5e-10  Score=59.59  Aligned_cols=39  Identities=28%  Similarity=0.377  Sum_probs=36.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            568899999999999999999999999999999999865

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=9.2e-11  Score=60.27  Aligned_cols=39  Identities=23%  Similarity=0.393  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            568899999999999999999999999999999999876

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-10  Score=59.99  Aligned_cols=40  Identities=28%  Similarity=0.390  Sum_probs=37.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1e-10  Score=60.81  Aligned_cols=40  Identities=25%  Similarity=0.459  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.4e-10  Score=60.26  Aligned_cols=40  Identities=28%  Similarity=0.449  Sum_probs=37.3

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=1.9e-11  Score=74.70  Aligned_cols=58  Identities=14%  Similarity=0.153  Sum_probs=50.7

Q ss_pred             ccchHHHHHHHHhhcc-cc---CCCceeecccccccCCChHHHHHh-HHhcCCCCccccCCCC
Q 031430            9 AIDTANCLMLLSKVGE-TD---QGKRVFACKTCNKEFPSFQALGGH-RASHKKPKLMTMASSG   66 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~-~h---~~~k~~~C~~C~~~f~~~~~l~~h-~~~h~~~~~~~c~~c~   66 (159)
                      ..+.|.....|..|++ +|   .+++||.|.+|++.|...+.|..| +++|+++++|.|..+.
T Consensus        24 Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           24 CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            3455677889999997 59   678999999999999999999999 8999999999998743

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-10  Score=59.99  Aligned_cols=40  Identities=25%  Similarity=0.390  Sum_probs=37.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-10  Score=60.18  Aligned_cols=41  Identities=29%  Similarity=0.420  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHH-HcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMR-RHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|++ +|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            56889999999999999999999999999 999999998753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-10  Score=59.81  Aligned_cols=40  Identities=25%  Similarity=0.407  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            5688999999999999999999999999999999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-10  Score=60.54  Aligned_cols=40  Identities=28%  Similarity=0.428  Sum_probs=37.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            5678899999999999999999999999999999999875

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.8e-10  Score=59.12  Aligned_cols=39  Identities=26%  Similarity=0.354  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            568899999999999999999999999999999999876

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.4e-10  Score=60.13  Aligned_cols=41  Identities=29%  Similarity=0.436  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-10  Score=60.51  Aligned_cols=41  Identities=27%  Similarity=0.475  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-10  Score=60.62  Aligned_cols=41  Identities=27%  Similarity=0.443  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.9e-10  Score=59.70  Aligned_cols=41  Identities=29%  Similarity=0.507  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-10  Score=59.43  Aligned_cols=39  Identities=26%  Similarity=0.312  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            568899999999999999999999999999999999876

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-10  Score=60.34  Aligned_cols=40  Identities=28%  Similarity=0.542  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+|++.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.9e-10  Score=59.66  Aligned_cols=41  Identities=29%  Similarity=0.396  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+|++.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.4e-10  Score=59.61  Aligned_cols=39  Identities=28%  Similarity=0.428  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            568899999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-10  Score=60.54  Aligned_cols=41  Identities=24%  Similarity=0.339  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.1e-11  Score=60.95  Aligned_cols=41  Identities=27%  Similarity=0.385  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=9.7e-11  Score=59.60  Aligned_cols=39  Identities=31%  Similarity=0.507  Sum_probs=36.1

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            567889999999999999999999999999999998864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.6e-11  Score=59.55  Aligned_cols=39  Identities=26%  Similarity=0.415  Sum_probs=36.1

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            568899999999999999999999999999999998865

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.4e-11  Score=60.86  Aligned_cols=41  Identities=24%  Similarity=0.413  Sum_probs=37.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.8e-10  Score=59.70  Aligned_cols=41  Identities=27%  Similarity=0.396  Sum_probs=37.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            56889999999999999999999999999999999998753

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.7e-10  Score=59.30  Aligned_cols=39  Identities=26%  Similarity=0.339  Sum_probs=36.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      ..|.++++|.|.+||+.|.+.+.|..|+++|+++++|.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            567889999999999999999999999999999999876

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=60.38  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=37.2

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      ..|.++++|.|.+||+.|.+...|..|+++|.++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999874

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.06  E-value=1.2e-10  Score=58.22  Aligned_cols=37  Identities=43%  Similarity=0.683  Sum_probs=33.7

Q ss_pred             CCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      |.++++|.|.+||+.|...+.|..|+++|.++++|..
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4678999999999999999999999999999998865

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.5e-10  Score=60.06  Aligned_cols=41  Identities=27%  Similarity=0.471  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.+|++.|.+...|..|+++|.++++|.|..
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999999999999999998753

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.9e-10  Score=59.69  Aligned_cols=40  Identities=25%  Similarity=0.371  Sum_probs=37.0

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHccc-ccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRA-AAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~-~~~~~~~  116 (159)
                      +.|.+++||.|.+||+.|.+.+.|..|+++|.+ +++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            568899999999999999999999999999999 9998774

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.7e-10  Score=59.81  Aligned_cols=40  Identities=28%  Similarity=0.524  Sum_probs=37.3

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+...|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.2e-10  Score=59.81  Aligned_cols=39  Identities=23%  Similarity=0.356  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            568899999999999999999999999999999999876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.03  E-value=1.3e-10  Score=62.49  Aligned_cols=47  Identities=13%  Similarity=0.190  Sum_probs=37.6

Q ss_pred             CCCCCCCCCC---CCCCCCCcccccccccccCChhHHHHHHHHcccccCC
Q 031430           67 EDFDQTQMPP---ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAM  113 (159)
Q Consensus        67 ~~f~~~~~l~---~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~  113 (159)
                      +.|.....+.   +.|.++++|.|.+||+.|.+.+.|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4455444443   2356788999999999999999999999999999886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.9e-10  Score=58.92  Aligned_cols=40  Identities=28%  Similarity=0.473  Sum_probs=37.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|.++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5688999999999999999999999999999999999874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.02  E-value=1.9e-10  Score=56.74  Aligned_cols=36  Identities=25%  Similarity=0.490  Sum_probs=33.8

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCCC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      |+++|++++||.|+.|++.|.....|..|++.|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            788999999999999999999999999999999864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.02  E-value=2.1e-10  Score=57.35  Aligned_cols=37  Identities=35%  Similarity=0.647  Sum_probs=34.1

Q ss_pred             cCCCceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430           26 DQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus        26 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      |+++++|.|.+|++.|...+.|..|++.|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            6789999999999999999999999999999999865

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2e-10  Score=56.70  Aligned_cols=37  Identities=19%  Similarity=0.466  Sum_probs=34.0

Q ss_pred             ccccCCCceeecccccccCCChHHHHHhHHhcCCCCc
Q 031430           23 GETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKL   59 (159)
Q Consensus        23 ~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (159)
                      +++|+++++|.|..|++.|...+.|..|++.|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999999999998764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=2.4e-10  Score=67.17  Aligned_cols=60  Identities=20%  Similarity=0.240  Sum_probs=52.7

Q ss_pred             cchHHHHHHHHhhccccCCC----ceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCC
Q 031430           10 IDTANCLMLLSKVGETDQGK----RVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDF   69 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~----k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f   69 (159)
                      ...|.....|..|+++|.++    ++|.|.+|++.|.....|..|++.|.++.++.|..|+..+
T Consensus        22 ~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           22 DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            34566678899999877665    7999999999999999999999999999999999998764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2.7e-10  Score=59.74  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=38.0

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccccC
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADG  119 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~  119 (159)
                      ..+.++++|.|.+|++.|.+...|..|+++|+++++|.|..++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3467889999999999999999999999999999999776543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=9.5e-11  Score=70.30  Aligned_cols=56  Identities=18%  Similarity=0.063  Sum_probs=50.7

Q ss_pred             cccchHHHHHHHHhhccc-cCCCce--------eecccccccCCChHHHHHhHHhcCCCCccccC
Q 031430            8 AAIDTANCLMLLSKVGET-DQGKRV--------FACKTCNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus         8 ~~~~~~~~~~~l~~h~~~-h~~~k~--------~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      .....|.....|..|+++ |.++++        |.|..|++.|.....|..|+++|+++++|.|.
T Consensus        30 ~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           30 SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            345677788899999998 999888        99999999999999999999999999999986

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=3.1e-10  Score=55.96  Aligned_cols=36  Identities=14%  Similarity=0.447  Sum_probs=32.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccC
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAA  112 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~  112 (159)
                      +.|.++++|.|.+||+.|.+.+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457889999999999999999999999999998764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.01  E-value=5.9e-11  Score=69.58  Aligned_cols=64  Identities=13%  Similarity=0.056  Sum_probs=56.2

Q ss_pred             ccchHHHHHHHHhhccccCCCceeeccc--ccccCCChHHHHHhHHhcCCCCccccCC---CCCCCCCCCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKT--CNKEFPSFQALGGHRASHKKPKLMTMAS---SGEDFDQTQMP   75 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~---c~~~f~~~~~l   75 (159)
                      ....|.....|..|+++|.++++|.|+.  |++.|.....|..|++.|.+   |.|..   |++.|.....|
T Consensus         9 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            3456677889999999999999999988  99999999999999999988   99999   99998764433

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=3.1e-10  Score=64.64  Aligned_cols=39  Identities=23%  Similarity=0.328  Sum_probs=35.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +.|.++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C   45 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC   45 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEEC
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeEC
Confidence            568899999999999999999999999999999988744

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.99  E-value=1.4e-10  Score=62.90  Aligned_cols=35  Identities=29%  Similarity=0.476  Sum_probs=29.0

Q ss_pred             CCCcccccccccccCChhHHHHHHHHcccccCCCc
Q 031430           81 KPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        81 ~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      |+++|.|.+||+.|.+...|..|+++|.+++++.|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   35 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKC   35 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCC
Confidence            46899999999999999999999999999988744

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.99  E-value=4.3e-10  Score=54.61  Aligned_cols=34  Identities=24%  Similarity=0.392  Sum_probs=31.4

Q ss_pred             CCCCCcccccccccccCChhHHHHHHHHcccccC
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHMRRHRAAAA  112 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~  112 (159)
                      |.++++|.|.+||+.|.+.+.|..|+++|.+++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6788999999999999999999999999998754

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.98  E-value=2.2e-10  Score=62.14  Aligned_cols=49  Identities=24%  Similarity=0.241  Sum_probs=44.5

Q ss_pred             cchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           10 IDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        10 ~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      ...|.....|..|+++|.++++|.|+.|++.|.....|..|++.|.+++
T Consensus         8 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            8 GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            4556778889999999999999999999999999999999999998764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.97  E-value=4.9e-10  Score=54.49  Aligned_cols=34  Identities=18%  Similarity=0.379  Sum_probs=31.5

Q ss_pred             CCCCCcccccccccccCChhHHHHHHHHcccccC
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHMRRHRAAAA  112 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~  112 (159)
                      |.++++|.|.+||+.|...+.|..|+++|+++.|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6789999999999999999999999999998754

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=9.3e-10  Score=59.14  Aligned_cols=45  Identities=22%  Similarity=0.265  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHH-HcccccCCCccccCCc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMR-RHRAAAAMGAVADGLV  121 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~~~~~~~~~  121 (159)
                      ..+.++++|.|.+|++.|.+...|..|++ +|.++++|.|..++..
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~   50 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG   50 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCS
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCC
Confidence            34678899999999999999999999997 9999999866554444

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.97  E-value=5.4e-10  Score=54.27  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=32.4

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCc
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKL   59 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (159)
                      +|+++++|.|..|++.|...+.|..|++.|+++++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            58899999999999999999999999999998764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=5.2e-10  Score=55.75  Aligned_cols=33  Identities=21%  Similarity=0.294  Sum_probs=30.3

Q ss_pred             CCCCCCcccccc--cccccCChhHHHHHHHHcccc
Q 031430           78 SPRKPKTHECSI--CGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        78 ~~~~~k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      .+.+++||.|..  |+++|.+.+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467899999986  999999999999999999986

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.96  E-value=5.8e-10  Score=54.21  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=32.4

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCCc
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKL   59 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (159)
                      +|+++++|.|.+|++.|...+.|..|++.|+++++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            58899999999999999999999999999998764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=6.4e-10  Score=62.23  Aligned_cols=41  Identities=27%  Similarity=0.211  Sum_probs=36.6

Q ss_pred             ccCCCceeeccc--ccccCCChHHHHHhH-HhcCCCCccccCCC
Q 031430           25 TDQGKRVFACKT--CNKEFPSFQALGGHR-ASHKKPKLMTMASS   65 (159)
Q Consensus        25 ~h~~~k~~~C~~--C~~~f~~~~~l~~h~-~~h~~~~~~~c~~c   65 (159)
                      .+++++||.|..  |++.|...++|..|+ ++|++++|+.|..-
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            458999999975  999999999999997 68999999988653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=1.5e-09  Score=60.69  Aligned_cols=41  Identities=20%  Similarity=0.189  Sum_probs=36.2

Q ss_pred             CCCCCCCcccccc--cccccCChhHHHHHH-HHcccccCCCccc
Q 031430           77 ASPRKPKTHECSI--CGLEFAIGQALGGHM-RRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~~--Cgk~f~~~~~l~~H~-~~h~~~~~~~~~~  117 (159)
                      ...+++|||.|..  ||++|.+.+.|..|+ ++|++++|+.+..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3467899999975  999999999999998 6899999998864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=2.6e-10  Score=64.60  Aligned_cols=52  Identities=13%  Similarity=0.100  Sum_probs=46.6

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCcc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLM   60 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   60 (159)
                      ..+.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.++++.
T Consensus        15 C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           15 CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3455677889999999999999999999999999999999999999988764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.94  E-value=7.7e-10  Score=53.23  Aligned_cols=32  Identities=19%  Similarity=0.320  Sum_probs=30.0

Q ss_pred             CcccccccccccCChhHHHHHHHHcccccCCC
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAAAAMG  114 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~  114 (159)
                      +||.|.+||+.|.+.+.|..|+++|++++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999998874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.9e-10  Score=65.74  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=35.3

Q ss_pred             CCCCCcccccccccccCChhHHHHHHHHccc---ccCCCccccCC
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHMRRHRA---AAAMGAVADGL  120 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~---~~~~~~~~~~~  120 (159)
                      |+++++|.|.+|++.|.+...|..|+++|.+   +++|.|..++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k   46 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGK   46 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCc
Confidence            6789999999999999999999999999997   66765443333

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.93  E-value=1.1e-11  Score=73.66  Aligned_cols=66  Identities=17%  Similarity=0.209  Sum_probs=56.8

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMP   75 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   75 (159)
                      ....|.....|..|+++|.++++|.|+.|++.|.....|..|++.|.+ .++.|..|++.|.....|
T Consensus         9 C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            9 CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHL   74 (88)
T ss_dssp             TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhh
Confidence            345566778899999999999999999999999999999999999885 789999999887654333

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.92  E-value=2e-10  Score=64.24  Aligned_cols=52  Identities=17%  Similarity=0.289  Sum_probs=41.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHH-c-ccccCCCccccCCccCCCCCCcchhccCCCCceeeeccCC
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRR-H-RAAAAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNL  147 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~-h-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  147 (159)
                      ..|.++++|.|..||+.|.+...|..|++. | .++++|                   .|..|++.|....+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~-------------------~C~~C~k~f~~~~~L   56 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVY-------------------PCPFCFKEFTRKDNM   56 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCE-------------------ECTTTCCEESCHHHH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCe-------------------ECCCCCCccCCHHHH
Confidence            457789999999999999999999999998 7 477776                   556667767654443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.1e-09  Score=57.14  Aligned_cols=41  Identities=27%  Similarity=0.493  Sum_probs=37.4

Q ss_pred             CCCCCCCccccc--ccccccCChhHHHHHHHHcccccCCCccc
Q 031430           77 ASPRKPKTHECS--ICGLEFAIGQALGGHMRRHRAAAAMGAVA  117 (159)
Q Consensus        77 ~~~~~~k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~  117 (159)
                      +.|.++++|.|.  .||+.|.....|..|+++|.++++|.|..
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567889999998  89999999999999999999999998753

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.91  E-value=1.6e-09  Score=53.24  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=31.3

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +.|.+++||.|+.||+.|.+.+.|..|+++|.++
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            5688999999999999999999999999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.8e-10  Score=65.60  Aligned_cols=66  Identities=20%  Similarity=0.242  Sum_probs=50.5

Q ss_pred             HHHhhccccCCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCCh
Q 031430           18 LLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIG   97 (159)
Q Consensus        18 ~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~   97 (159)
                      .|..|+.+|.+++++.|..|++.|. ...|..|+ .|.+++++.|.                         .||+.|.. 
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~-------------------------~C~~~~~~-   55 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCG-------------------------NCGRNVLV-   55 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECS-------------------------SSCCEEET-
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcc-------------------------cCCCcCcH-
Confidence            3678999999999999999999994 88999998 77766555554                         45555443 


Q ss_pred             hHHHHHHHHccccc
Q 031430           98 QALGGHMRRHRAAA  111 (159)
Q Consensus        98 ~~l~~H~~~h~~~~  111 (159)
                      ..|..|+++|.++.
T Consensus        56 ~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           56 KDLKTHPEVCGREG   69 (75)
T ss_dssp             TGGGTHHHHBTTBS
T ss_pred             HHHHHHHHHccCCc
Confidence            56677888888763

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=7.4e-10  Score=66.87  Aligned_cols=51  Identities=22%  Similarity=0.303  Sum_probs=44.7

Q ss_pred             ccchH-HHHHHHHhhccccCCCceeecccccccCCChHHHHHh-HHhcCCCCcc
Q 031430            9 AIDTA-NCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGH-RASHKKPKLM   60 (159)
Q Consensus         9 ~~~~~-~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h-~~~h~~~~~~   60 (159)
                      ..+.| .....|..|+++| ++++|.|.+|++.|.....|..| ++.|++...+
T Consensus        40 C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           40 CQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             TCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            45667 7888999999999 99999999999999999999999 8899865443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.5e-09  Score=53.77  Aligned_cols=35  Identities=23%  Similarity=0.406  Sum_probs=32.2

Q ss_pred             CCCCCccccc--ccccccCChhHHHHHHHHcccccCC
Q 031430           79 PRKPKTHECS--ICGLEFAIGQALGGHMRRHRAAAAM  113 (159)
Q Consensus        79 ~~~~k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~~~  113 (159)
                      |.++++|.|.  .||+.|.+.+.|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678999999  5999999999999999999999876

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2e-09  Score=52.58  Aligned_cols=34  Identities=29%  Similarity=0.500  Sum_probs=31.2

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ..|.+++||.|.+|++.|.+.+.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3577899999999999999999999999999876

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=1.8e-09  Score=62.24  Aligned_cols=52  Identities=23%  Similarity=0.426  Sum_probs=41.6

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHH-Hcccc-cCCCccccCCccCCCCCCcchhccCCCCceeeeccCC
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMR-RHRAA-AAMGAVADGLVTRPLLPLPVLKKSNSCKRVFCLDLNL  147 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~-~h~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  147 (159)
                      +.|.++++|.|.+|++.|.+...|..|++ .|.++ ++|                   .|..|++.|....+|
T Consensus         8 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~-------------------~C~~C~~~f~~~~~L   61 (77)
T 2ct1_A            8 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKF-------------------HCPHCDTVIARKSDL   61 (77)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSE-------------------ECSSSSCEESSHHHH
T ss_pred             cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCcc-------------------CCCCCCCccCCHHHH
Confidence            67889999999999999999999999997 67764 566                   556677766655443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.1e-09  Score=52.47  Aligned_cols=33  Identities=30%  Similarity=0.493  Sum_probs=30.8

Q ss_pred             CCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           78 SPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        78 ~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      .|.++++|.|.+||+.|.+...|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            477899999999999999999999999999876

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.6e-09  Score=53.44  Aligned_cols=35  Identities=17%  Similarity=0.376  Sum_probs=32.0

Q ss_pred             ccccCCCceeecccccccCCChHHHHHh-HHhcCCC
Q 031430           23 GETDQGKRVFACKTCNKEFPSFQALGGH-RASHKKP   57 (159)
Q Consensus        23 ~~~h~~~k~~~C~~C~~~f~~~~~l~~h-~~~h~~~   57 (159)
                      +++|++++||.|+.|++.|...+.|..| ++.|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3689999999999999999999999999 8888764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.7e-09  Score=52.88  Aligned_cols=33  Identities=24%  Similarity=0.298  Sum_probs=30.6

Q ss_pred             CCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           78 SPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        78 ~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      .|.+++||.|.+|++.|.+.+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            467899999999999999999999999999876

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.86  E-value=1.2e-09  Score=57.28  Aligned_cols=35  Identities=26%  Similarity=0.420  Sum_probs=29.8

Q ss_pred             CCCCCcccccccccccCChhHHHHHHH-HcccccCC
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHMR-RHRAAAAM  113 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~  113 (159)
                      |+++++|.|.+||+.|.+...|..|++ +|.++...
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            778999999999999999999999999 99987654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=3.1e-09  Score=51.83  Aligned_cols=34  Identities=35%  Similarity=0.537  Sum_probs=31.1

Q ss_pred             CCCCCCcccccccccccCChhHHHHHHHHccccc
Q 031430           78 SPRKPKTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        78 ~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      .|.++++|.|.+||+.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999998763

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.8e-09  Score=53.09  Aligned_cols=34  Identities=21%  Similarity=0.443  Sum_probs=31.1

Q ss_pred             CCCCCCCcccccccccccCCh-hHHHHHHHHcccc
Q 031430           77 ASPRKPKTHECSICGLEFAIG-QALGGHMRRHRAA  110 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~-~~l~~H~~~h~~~  110 (159)
                      +.|.++++|.|..|++.|.+. +.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            357789999999999999999 9999999999876

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.8e-09  Score=52.06  Aligned_cols=35  Identities=23%  Similarity=0.394  Sum_probs=32.2

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      .+|++++||.|.+|++.|...+.|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            47899999999999999999999999999998753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.3e-09  Score=52.36  Aligned_cols=35  Identities=14%  Similarity=0.338  Sum_probs=32.0

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +.|++++||.|.+|++.|...+.|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999998753

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.9e-09  Score=52.96  Aligned_cols=33  Identities=21%  Similarity=0.376  Sum_probs=30.5

Q ss_pred             ccCCCceeeccc--ccccCCChHHHHHhHHhcCCC
Q 031430           25 TDQGKRVFACKT--CNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        25 ~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      .+++++||.|+.  |++.|...+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            578999999986  999999999999999999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.83  E-value=7.7e-11  Score=74.76  Aligned_cols=90  Identities=12%  Similarity=0.146  Sum_probs=58.2

Q ss_pred             ccccCCCceeecccccc--cCCChHHHHHhHHhcCCCCccccCCCCCCCCCC------CCCC--CCCCCCCccccccccc
Q 031430           23 GETDQGKRVFACKTCNK--EFPSFQALGGHRASHKKPKLMTMASSGEDFDQT------QMPP--ASPRKPKTHECSICGL   92 (159)
Q Consensus        23 ~~~h~~~k~~~C~~C~~--~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~------~~l~--~~~~~~k~~~C~~Cgk   92 (159)
                      +.+++|.++|.|...+-  .|.....+..+. ....++.+.|+.|++.|...      ..+.  ..|.+++||.|.+||+
T Consensus         4 ~~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~-l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k   82 (129)
T 2wbt_A            4 SDVDSGSKKYLSNHKGIFIHVTLEELKRYHQ-LTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLM   82 (129)
T ss_dssp             -CCCTTCCGGGGCSSCEEEECCHHHHHHHTT-SCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCC
T ss_pred             chhcccccccccccCCeeeeecHHhhhcccc-CChhhCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCc
Confidence            45788999998876543  343333222221 11233566777776655521      1111  1255789999999999


Q ss_pred             ccCChhHHHHHHHHcccccCCCc
Q 031430           93 EFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        93 ~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      .|.....|..|+++|  +++|.|
T Consensus        83 ~f~~~~~l~~H~~~H--~~~~~C  103 (129)
T 2wbt_A           83 PFSSSVSLKQHIRYT--EHTKVC  103 (129)
T ss_dssp             EESSHHHHHHHHHHT--CCCCBC
T ss_pred             ccCCHhHHHHHHHHC--CCCCCC
Confidence            999999999999999  666644

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.8e-09  Score=53.09  Aligned_cols=35  Identities=23%  Similarity=0.345  Sum_probs=32.1

Q ss_pred             cccCCCceeecccccccCCCh-HHHHHhHHhcCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSF-QALGGHRASHKKPK   58 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~-~~l~~h~~~h~~~~   58 (159)
                      ++|++++||.|+.|++.|... +.|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            579999999999999999999 99999999998753

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=3.1e-09  Score=51.85  Aligned_cols=35  Identities=17%  Similarity=0.307  Sum_probs=32.2

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      .+|++++||.|..|++.|.....|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            47899999999999999999999999999998763

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.9e-09  Score=52.45  Aligned_cols=34  Identities=21%  Similarity=0.312  Sum_probs=30.9

Q ss_pred             CCCCCCCcccccccccccCChhHHHHH-HHHcccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGH-MRRHRAA  110 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H-~~~h~~~  110 (159)
                      +.|.+++||.|.+||+.|.+.+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            357889999999999999999999999 8999864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=4.2e-09  Score=51.43  Aligned_cols=34  Identities=26%  Similarity=0.478  Sum_probs=30.7

Q ss_pred             CCCCCCcccccccccccCChhHHHHHHHHccccc
Q 031430           78 SPRKPKTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        78 ~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      .|.++++|.|..||+.|.+...|..|+++|.+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4667899999999999999999999999998763

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.79  E-value=2.2e-09  Score=58.75  Aligned_cols=49  Identities=16%  Similarity=0.255  Sum_probs=43.0

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhH-HhcCCC
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHR-ASHKKP   57 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~-~~h~~~   57 (159)
                      ....|.....|..|+++|.++++|.|+.|++.|.....|..|+ +.|.++
T Consensus         8 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            8 CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            3455677889999999999999999999999999999999996 678764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=3.2e-09  Score=52.52  Aligned_cols=35  Identities=20%  Similarity=0.434  Sum_probs=32.5

Q ss_pred             cCCCceeecc--cccccCCChHHHHHhHHhcCCCCcc
Q 031430           26 DQGKRVFACK--TCNKEFPSFQALGGHRASHKKPKLM   60 (159)
Q Consensus        26 h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~   60 (159)
                      |+++++|.|.  .|++.|...+.|..|++.|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6789999999  5999999999999999999998876

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.78  E-value=3.4e-09  Score=55.48  Aligned_cols=35  Identities=26%  Similarity=0.481  Sum_probs=30.0

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHH-hcCCCCc
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRA-SHKKPKL   59 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~   59 (159)
                      +|+++++|.|.+|++.|.....|..|++ .|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 8987654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.78  E-value=4.6e-09  Score=50.40  Aligned_cols=32  Identities=28%  Similarity=0.363  Sum_probs=29.9

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCCccc
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPKLMT   61 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   61 (159)
                      +||.|++|++.|...+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999998874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=8.9e-10  Score=66.66  Aligned_cols=54  Identities=24%  Similarity=0.279  Sum_probs=47.3

Q ss_pred             ccchHH-HHHHHHhhccccCC-CceeecccccccCCChHHHHHhHHhcCCCCcccc
Q 031430            9 AIDTAN-CLMLLSKVGETDQG-KRVFACKTCNKEFPSFQALGGHRASHKKPKLMTM   62 (159)
Q Consensus         9 ~~~~~~-~~~~l~~h~~~h~~-~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   62 (159)
                      ..+.|. ....|..|+++|.+ +++|.|.+|++.|.....|..|++.|+++++...
T Consensus        30 C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           30 CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            344566 67789999999999 9999999999999999999999999999888543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=1.1e-08  Score=57.20  Aligned_cols=36  Identities=22%  Similarity=0.417  Sum_probs=32.5

Q ss_pred             CCCCCCcccccccccccCChhHHHHHHHHcccccCC
Q 031430           78 SPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAM  113 (159)
Q Consensus        78 ~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~  113 (159)
                      .+++++||.|.+|++.|.+.+.|..|+++|+++...
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~   42 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQ   42 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccc
Confidence            467899999999999999999999999999997543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.78  E-value=4.1e-09  Score=59.95  Aligned_cols=41  Identities=20%  Similarity=0.318  Sum_probs=35.6

Q ss_pred             CCCCCCCCCccccc--ccccccCChhHHHHHHHHcccccCCCc
Q 031430           75 PPASPRKPKTHECS--ICGLEFAIGQALGGHMRRHRAAAAMGA  115 (159)
Q Consensus        75 l~~~~~~~k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~~~~~  115 (159)
                      +...+.++++|.|+  .||+.|.....|..|+++|.++++|.|
T Consensus        10 ~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C   52 (73)
T 1f2i_G           10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC   52 (73)
T ss_dssp             TSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             hhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeEC
Confidence            33567789999997  599999999999999999999988744

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=6e-09  Score=50.76  Aligned_cols=35  Identities=23%  Similarity=0.457  Sum_probs=32.0

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      .+|+++++|.|++|++.|.....|..|++.|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            36889999999999999999999999999998763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=8.7e-09  Score=50.23  Aligned_cols=34  Identities=29%  Similarity=0.579  Sum_probs=31.3

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      .|.++++|.|+.|++.|.....|..|++.|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999998763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.72  E-value=5.9e-09  Score=51.15  Aligned_cols=32  Identities=22%  Similarity=0.316  Sum_probs=28.4

Q ss_pred             cCCCceeecccccccCCChHHHHHhHHhcCCCCccccCC
Q 031430           26 DQGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMAS   64 (159)
Q Consensus        26 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   64 (159)
                      +.+++||.|++|++.|...++|..|+       +|.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            57899999999999999999999998       676653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.70  E-value=9.6e-09  Score=50.53  Aligned_cols=33  Identities=36%  Similarity=0.687  Sum_probs=29.9

Q ss_pred             CCCCCcccccc--cccccCChhHHHHHHHHccccc
Q 031430           79 PRKPKTHECSI--CGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        79 ~~~~k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      |.++++|.|.+  ||+.|.+.+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            67889999994  9999999999999999998863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.69  E-value=4.5e-10  Score=53.67  Aligned_cols=32  Identities=25%  Similarity=0.488  Sum_probs=29.4

Q ss_pred             CcccccccccccCChhHHHHHHHHcccccCCC
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAAAAMG  114 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~  114 (159)
                      +||.|.+||+.|.+.+.|..|+++|++++++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            58999999999999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=47.31  Aligned_cols=29  Identities=24%  Similarity=0.461  Sum_probs=27.0

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ++||.|..||+.|.....|..|+++|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47899999999999999999999999876

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.68  E-value=4.6e-09  Score=54.70  Aligned_cols=39  Identities=18%  Similarity=0.344  Sum_probs=34.4

Q ss_pred             HhhccccCCCceeecc--cccccCCChHHHHHhHHhcCCCC
Q 031430           20 SKVGETDQGKRVFACK--TCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        20 ~~h~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      ..|..+|++++||.|.  .|++.|...+.|..|++.|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4556789999999996  79999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.67  E-value=1.8e-08  Score=46.40  Aligned_cols=28  Identities=29%  Similarity=0.593  Sum_probs=26.2

Q ss_pred             CcccccccccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +||.|.+||+.|.+.+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5799999999999999999999999876

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.67  E-value=1.2e-08  Score=47.05  Aligned_cols=28  Identities=21%  Similarity=0.335  Sum_probs=26.3

Q ss_pred             CcccccccccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +||.|.+||+.|...+.|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999876

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.65  E-value=2.1e-08  Score=46.41  Aligned_cols=30  Identities=23%  Similarity=0.442  Sum_probs=27.3

Q ss_pred             CcccccccccccCChhHHHHHHHHcccccC
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAAAA  112 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~  112 (159)
                      ++|.|.+||+.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            579999999999999999999999988753

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=1.9e-08  Score=45.68  Aligned_cols=27  Identities=30%  Similarity=0.460  Sum_probs=25.1

Q ss_pred             CCcccccccccccCChhHHHHHHHHcc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      ++||.|..||+.|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999884

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.63  E-value=1.9e-08  Score=49.42  Aligned_cols=34  Identities=21%  Similarity=0.362  Sum_probs=30.8

Q ss_pred             ccCCCceeeccc--ccccCCChHHHHHhHHhcCCCC
Q 031430           25 TDQGKRVFACKT--CNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        25 ~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      .|+++++|.|.+  |++.|...+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            578999999994  9999999999999999998763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.63  E-value=1.8e-08  Score=46.26  Aligned_cols=29  Identities=31%  Similarity=0.571  Sum_probs=26.6

Q ss_pred             CcccccccccccCChhHHHHHHHHccccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      +||.|..||+.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.62  E-value=2.8e-08  Score=46.96  Aligned_cols=30  Identities=23%  Similarity=0.425  Sum_probs=27.3

Q ss_pred             CCccccc--ccccccCChhHHHHHHHHccccc
Q 031430           82 PKTHECS--ICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        82 ~k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      ++||.|.  .||+.|.+.+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999998763

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=1.7e-08  Score=46.12  Aligned_cols=28  Identities=29%  Similarity=0.692  Sum_probs=25.8

Q ss_pred             CCcccccccccccCChhHHHHHHHHccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      ++||.|.+||+.|.+.+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.61  E-value=2.1e-08  Score=46.11  Aligned_cols=29  Identities=28%  Similarity=0.571  Sum_probs=26.6

Q ss_pred             CcccccccccccCChhHHHHHHHHccccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      +||.|.+||+.|.....|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.61  E-value=1.5e-08  Score=46.11  Aligned_cols=27  Identities=22%  Similarity=0.466  Sum_probs=24.9

Q ss_pred             CCcccccccccccCChhHHHHHHHHcc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      ++||.|..||+.|.+.+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999999874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.60  E-value=3.6e-08  Score=48.30  Aligned_cols=26  Identities=31%  Similarity=0.584  Sum_probs=24.6

Q ss_pred             CCCCCcccccccccccCChhHHHHHH
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHM  104 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~  104 (159)
                      +.+++||.|.+||++|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46899999999999999999999999

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.60  E-value=2.9e-08  Score=46.59  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=26.5

Q ss_pred             Cccccc--ccccccCChhHHHHHHHHccccc
Q 031430           83 KTHECS--ICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        83 k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      +||.|.  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999998863

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.3e-08  Score=56.80  Aligned_cols=49  Identities=14%  Similarity=0.125  Sum_probs=42.5

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecc-cccccCCChHHHHHhHHhcCCCCc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACK-TCNKEFPSFQALGGHRASHKKPKL   59 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~-~C~~~f~~~~~l~~h~~~h~~~~~   59 (159)
                      ..+.|. ...|..|+++ ++++||.|+ .|++.|...+.|..|++.|....+
T Consensus        16 C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           16 CTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             SCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            345577 7889999999 999999999 999999999999999999876543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.97  E-value=7.9e-09  Score=47.76  Aligned_cols=28  Identities=32%  Similarity=0.718  Sum_probs=26.1

Q ss_pred             CcccccccccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +||.|.+||+.|.+.+.|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5799999999999999999999999876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.55  E-value=3.4e-08  Score=44.65  Aligned_cols=27  Identities=30%  Similarity=0.539  Sum_probs=23.9

Q ss_pred             cccccccccccCChhHHHHHHHHcccc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ||.|.+||+.|.+.+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=1.5e-08  Score=60.02  Aligned_cols=43  Identities=16%  Similarity=0.241  Sum_probs=38.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccccC
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADG  119 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~  119 (159)
                      ..|.++++|.|.+||+.|.+...|..|+++|+++++|.|....
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            5588999999999999999999999999999999999886543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.95  E-value=9e-09  Score=47.83  Aligned_cols=29  Identities=34%  Similarity=0.437  Sum_probs=26.7

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ++||.|..||+.|.+.+.|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=6.1e-08  Score=54.16  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=32.6

Q ss_pred             ccccCCCceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           23 GETDQGKRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        23 ~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      ...|.+++||.|.+|++.|...+.|..|+++|+++.
T Consensus         5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            346788999999999999999999999999999863

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.53  E-value=1.7e-08  Score=57.25  Aligned_cols=46  Identities=26%  Similarity=0.407  Sum_probs=40.9

Q ss_pred             ccchHHHHHHHHhhccccCCCceeeccc--ccccCCChHHHHHhHHhc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKT--CNKEFPSFQALGGHRASH   54 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h   54 (159)
                      ..+.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|
T Consensus        25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4566777889999999999999999965  999999999999998765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.52  E-value=7.6e-08  Score=44.42  Aligned_cols=30  Identities=20%  Similarity=0.471  Sum_probs=27.3

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      ++||.|..|++.|.....|..|++.|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998753

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.49  E-value=4e-09  Score=50.22  Aligned_cols=31  Identities=29%  Similarity=0.412  Sum_probs=28.4

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCCcc
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPKLM   60 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   60 (159)
                      +||.|++|++.|...+.|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5799999999999999999999999998876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.49  E-value=5.8e-08  Score=44.98  Aligned_cols=28  Identities=25%  Similarity=0.473  Sum_probs=25.6

Q ss_pred             CcccccccccccCChhHHHHH-HHHcccc
Q 031430           83 KTHECSICGLEFAIGQALGGH-MRRHRAA  110 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H-~~~h~~~  110 (159)
                      +||.|..||+.|.+.+.|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            579999999999999999999 6899876

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.49  E-value=2.9e-08  Score=51.55  Aligned_cols=34  Identities=24%  Similarity=0.344  Sum_probs=30.4

Q ss_pred             CCCCCCccccc--ccccccCChhHHHHHHHHccccc
Q 031430           78 SPRKPKTHECS--ICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        78 ~~~~~k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      .|.+++||.|.  .||+.|.+.+.|..|+++|++++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            47789999996  79999999999999999998863

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.9e-08  Score=45.24  Aligned_cols=26  Identities=35%  Similarity=0.704  Sum_probs=24.0

Q ss_pred             CcccccccccccCChhHHHHHHHHcc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      +||.|.+||+.|.+.+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999874

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.46  E-value=1.3e-07  Score=43.28  Aligned_cols=28  Identities=32%  Similarity=0.687  Sum_probs=26.1

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +||.|+.|++.|...+.|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.45  E-value=9.5e-08  Score=43.82  Aligned_cols=29  Identities=34%  Similarity=0.483  Sum_probs=26.5

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +||.|+.|++.|...+.|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.45  E-value=1.1e-07  Score=43.29  Aligned_cols=28  Identities=25%  Similarity=0.552  Sum_probs=25.6

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      ++||.|++|++.|...+.|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999998864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=1.4e-07  Score=42.63  Aligned_cols=27  Identities=26%  Similarity=0.613  Sum_probs=24.9

Q ss_pred             CceeecccccccCCChHHHHHhHHhcC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      ++||.|+.|++.|...+.|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            579999999999999999999999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=1.8e-07  Score=43.99  Aligned_cols=30  Identities=30%  Similarity=0.633  Sum_probs=27.2

Q ss_pred             Cceeecc--cccccCCChHHHHHhHHhcCCCC
Q 031430           29 KRVFACK--TCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        29 ~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      ++||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999998763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=1.1e-07  Score=43.12  Aligned_cols=27  Identities=22%  Similarity=0.572  Sum_probs=24.7

Q ss_pred             CceeecccccccCCChHHHHHhHHhcC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      ++||.|+.|++.|...+.|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999998874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.40  E-value=2e-07  Score=42.93  Aligned_cols=29  Identities=14%  Similarity=0.366  Sum_probs=26.6

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      ++|.|..|++.|...+.|..|++.|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47999999999999999999999998765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.39  E-value=2.3e-07  Score=43.35  Aligned_cols=29  Identities=34%  Similarity=0.675  Sum_probs=26.3

Q ss_pred             ceeecc--cccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACK--TCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=1.6e-07  Score=42.93  Aligned_cols=29  Identities=28%  Similarity=0.520  Sum_probs=26.4

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.37  E-value=1.5e-07  Score=42.95  Aligned_cols=29  Identities=24%  Similarity=0.470  Sum_probs=26.3

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.34  E-value=3.2e-07  Score=41.22  Aligned_cols=27  Identities=30%  Similarity=0.672  Sum_probs=23.7

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      ||.|..|++.|...+.|..|++.|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999998763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.68  E-value=6e-08  Score=44.88  Aligned_cols=29  Identities=24%  Similarity=0.505  Sum_probs=26.4

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      ++||.|..|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999998865

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.33  E-value=2.4e-07  Score=42.33  Aligned_cols=27  Identities=26%  Similarity=0.454  Sum_probs=24.9

Q ss_pred             Cccccc--ccccccCChhHHHHHHHHccc
Q 031430           83 KTHECS--ICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        83 k~~~C~--~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      ++|.|.  .||+.|.+.+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            579999  999999999999999999864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.68  E-value=6.3e-08  Score=44.55  Aligned_cols=28  Identities=25%  Similarity=0.460  Sum_probs=25.7

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +||.|..|++.|...+.|..|++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5799999999999999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.28  E-value=3.9e-07  Score=42.01  Aligned_cols=28  Identities=29%  Similarity=0.580  Sum_probs=25.4

Q ss_pred             ceeecccccccCCChHHHHHh-HHhcCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGH-RASHKKP   57 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h-~~~h~~~   57 (159)
                      +||.|..|++.|...+.|..| ++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            479999999999999999999 7888875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2.1e-07  Score=41.59  Aligned_cols=26  Identities=27%  Similarity=0.653  Sum_probs=23.3

Q ss_pred             ceeecccccccCCChHHHHHhHHhcC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      +||.|+.|++.|...+.|..|++.|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999988773

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.08  E-value=1.9e-06  Score=39.17  Aligned_cols=27  Identities=26%  Similarity=0.663  Sum_probs=24.7

Q ss_pred             ceeecc--cccccCCChHHHHHhHHhcCC
Q 031430           30 RVFACK--TCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        30 k~~~C~--~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.46  E-value=7e-05  Score=42.59  Aligned_cols=44  Identities=18%  Similarity=0.106  Sum_probs=37.1

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccccCCCccccCCcc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAAAMGAVADGLVT  122 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~  122 (159)
                      ..+.+.+++.|..|++.|. ...|..|+ .|.+++++.|..++..+
T Consensus        10 ~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~   53 (75)
T 2d9k_A           10 ETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNV   53 (75)
T ss_dssp             CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEE
T ss_pred             cccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcC
Confidence            4467899999999999994 99999999 89999999776665543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.14  E-value=7.3e-05  Score=46.55  Aligned_cols=30  Identities=23%  Similarity=0.346  Sum_probs=27.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHH
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      .-++|+++|.|..|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            557799999999999999999999999874

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.03  E-value=0.00014  Score=45.30  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=29.5

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHh
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      ..-..|+|+++|.|..|++.|.....|..|+++
T Consensus        40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            356788999999999999999999999999764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.02  E-value=0.0004  Score=43.66  Aligned_cols=76  Identities=16%  Similarity=0.274  Sum_probs=50.4

Q ss_pred             CceeecccccccCCChHHHHHhH--HhcCCC-CccccCC------CCCCCCCCCCCCCCCCCCCcccccccccccCChhH
Q 031430           29 KRVFACKTCNKEFPSFQALGGHR--ASHKKP-KLMTMAS------SGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQA   99 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~--~~h~~~-~~~~c~~------c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~   99 (159)
                      .+++.|.+|+..|...+.+..|.  +.|... +.+.+..      -++.+..... ...+.+...|-|..|+.+|.....
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~C~~C~~~f~s~~~  108 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPA-EISDGEDRSKCCPVCNMTFSSPVV  108 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSS-CCSSCCCTTTEETTTTEECSSHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCcc-ccccCCCCCeEcCCCCCEeCCHHH
Confidence            35789999999999999999987  445321 2222210      1222221111 123456788999999999999999


Q ss_pred             HHHHHH
Q 031430          100 LGGHMR  105 (159)
Q Consensus       100 l~~H~~  105 (159)
                      +..|..
T Consensus       109 ~~~H~~  114 (127)
T 1zu1_A          109 AESHYI  114 (127)
T ss_dssp             HHHHHT
T ss_pred             HHHHHC
Confidence            999974

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.68  E-value=0.0069  Score=33.09  Aligned_cols=54  Identities=17%  Similarity=0.255  Sum_probs=41.5

Q ss_pred             ccccccCCChHHHHHhHH-hcCCCCccccCCCCCCCCCCCCCCCCCCCCCccccc--ccccccCChhHHHHHHHHc
Q 031430           35 KTCNKEFPSFQALGGHRA-SHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECS--ICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        35 ~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~--~Cgk~f~~~~~l~~H~~~h  107 (159)
                      ..|++.|.....|..|+. .|.+.++-                   ....+|.|.  .|++.+.....|..|+++.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~-------------------~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFK-------------------HPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCC-------------------CSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccC-------------------CCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            459999999999999984 68765320                   012468886  7999999999999999864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.09  E-value=0.0053  Score=31.07  Aligned_cols=28  Identities=29%  Similarity=0.521  Sum_probs=24.8

Q ss_pred             CcccccccccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      -+|.|+.|+..|.....|+.||+--.++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            6789999999999999999999965554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.85  E-value=0.028  Score=28.42  Aligned_cols=25  Identities=32%  Similarity=0.513  Sum_probs=22.5

Q ss_pred             ceeecccccccCCChHHHHHhHHhc
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      .+|.|+.|+..|.....|+.|+..-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5789999999999999999998843

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=94.80  E-value=0.016  Score=31.58  Aligned_cols=45  Identities=16%  Similarity=0.225  Sum_probs=36.7

Q ss_pred             cchHHHHHHHHhhc-cccCCCc------eeecc--cccccCCChHHHHHhHHhc
Q 031430           10 IDTANCLMLLSKVG-ETDQGKR------VFACK--TCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        10 ~~~~~~~~~l~~h~-~~h~~~k------~~~C~--~C~~~f~~~~~l~~h~~~h   54 (159)
                      ...|..+..|..|+ ..|.+.+      +|.|.  .|+..+.....|..|++..
T Consensus        10 ~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           10 PESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            35677788899997 4887765      79996  8999999999999998863

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=90.64  E-value=0.13  Score=29.65  Aligned_cols=31  Identities=23%  Similarity=0.438  Sum_probs=23.6

Q ss_pred             CCCcccccccccccCChhHHHHHHHHcccccCCC
Q 031430           81 KPKTHECSICGLEFAIGQALGGHMRRHRAAAAMG  114 (159)
Q Consensus        81 ~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~  114 (159)
                      ......|-+||+.|.   .|.+|+..|+|..|..
T Consensus        18 ~~d~iiClecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           18 QDDHIVCLECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             CSSCEECTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             CCCceEecccchhhH---HHHHHHHHccCCCHHH
Confidence            345578999999998   4789999977665443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.64  E-value=0.46  Score=22.47  Aligned_cols=29  Identities=17%  Similarity=0.245  Sum_probs=24.2

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ...+.|..|+-+|..-..+..|.+.....
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~YC~s   34 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFYCKN   34 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHTSCC
T ss_pred             cCcCeeccccceehhhHHHhhhheecCCC
Confidence            45678999999999999999999865543

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=88.75  E-value=0.35  Score=28.91  Aligned_cols=29  Identities=21%  Similarity=0.283  Sum_probs=19.7

Q ss_pred             CccccCCCCCCCCCCCCCCCCCCCCCccccccccccc
Q 031430           58 KLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEF   94 (159)
Q Consensus        58 ~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f   94 (159)
                      .+++|..||..|.  ..      ..+|-.|+.|+...
T Consensus        66 ~p~~C~~CG~~F~--~~------~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK--AE------INIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC--CC------SSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeec--cc------CCCCCCCcCCCCCc
Confidence            5678888888881  11      24677888887554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.73  E-value=0.51  Score=22.11  Aligned_cols=26  Identities=23%  Similarity=0.313  Sum_probs=21.9

Q ss_pred             cccccccccccCChhHHHHHHH-Hccc
Q 031430           84 THECSICGLEFAIGQALGGHMR-RHRA  109 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~-~h~~  109 (159)
                      .|.|++|-+.|.+...|..|-. .|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            4899999999999999999975 4443

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=87.64  E-value=0.62  Score=23.42  Aligned_cols=29  Identities=17%  Similarity=0.402  Sum_probs=14.7

Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 031430           59 LMTMASSGEDFDQTQMPPASPRKPKTHECSICGL   92 (159)
Q Consensus        59 ~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk   92 (159)
                      -|.|-.||+.|.....- .    ....+|+.||.
T Consensus         3 iY~C~rCg~~fs~~el~-~----lP~IrCpyCGy   31 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQLK-V----LPGVRCPYCGY   31 (48)
T ss_dssp             --CCCCTTTTCCCCCSC-C----CSSSCCTTTCC
T ss_pred             EEEeeccCCCccHHHHh-h----CCCcccCccCc
Confidence            36677777777642221 1    12356777773

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.44  E-value=0.86  Score=21.52  Aligned_cols=26  Identities=19%  Similarity=0.275  Sum_probs=22.2

Q ss_pred             CceeecccccccCCChHHHHHhHHhc
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      ...+.|..|+-.|....++..|.+..
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCcCeeccccceehhhHHHhhhheec
Confidence            45688999999999999999997654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.10  E-value=0.3  Score=27.58  Aligned_cols=42  Identities=17%  Similarity=0.365  Sum_probs=27.0

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQ   71 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   71 (159)
                      ---|.|+.||..+. +..+..|...-.+...+.|..|++.|..
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             eeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC
Confidence            34578888887765 4556777655554455666666666653

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=80.36  E-value=0.73  Score=25.91  Aligned_cols=27  Identities=22%  Similarity=0.443  Sum_probs=19.0

Q ss_pred             cccccccccccC-------ChhHHHHHHHHcccc
Q 031430           84 THECSICGLEFA-------IGQALGGHMRRHRAA  110 (159)
Q Consensus        84 ~~~C~~Cgk~f~-------~~~~l~~H~~~h~~~  110 (159)
                      .-.|..|++.+.       .-++|.+|++.++.+
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            346777777765       467899999876544

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=80.26  E-value=1.2  Score=30.09  Aligned_cols=28  Identities=21%  Similarity=0.396  Sum_probs=23.9

Q ss_pred             CCcccccccccccCC-hhHHHHHHHHccc
Q 031430           82 PKTHECSICGLEFAI-GQALGGHMRRHRA  109 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~-~~~l~~H~~~h~~  109 (159)
                      ..|..|..||..|.+ -..|+.|+..|-.
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~~  195 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEYD  195 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHHH
Confidence            568999999999987 8999999887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-11
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	6e-11

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.3 bits (131), Expect = 1e-11
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 30 RVFACKTCNKEFPSFQALGGHRASHKKPK 58
          R + C  C +EF S QALGGH   H++ +
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.0 bits (125), Expect = 6e-11
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 82  PKTHECSICGLEFAIGQALGGHMRRHR 108
           P+++ CS C  EF   QALGGHM  HR
Sbjct: 3   PRSYTCSFCKREFRSAQALGGHMNVHR 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.64
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.49
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.44
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.43
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.4
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.38
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.38
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.37
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.34
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.33
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.32
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.31
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.3
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.25
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.24
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.22
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.2
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.18
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.15
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.1
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.09
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.06
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.98
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.96
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.96
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.91
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.87
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.85
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.84
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.75
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.69
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.67
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.67
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.66
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.65
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.51
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.39
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.35
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.31
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.31
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.29
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.14
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.14
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.11
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.08
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.03
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.98
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.93
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.91
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.8
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.79
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.76
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.75
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.68
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.62
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.58
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.51
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.5
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.46
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.43
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.38
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.34
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.34
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.34
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.33
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.21
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.16
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.15
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.07
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.03
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.96
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.88
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.87
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.87
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.77
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.76
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.76
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.73
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.37
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.34
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.99
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.77
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.73
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.6
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.28
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.25
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.07
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.63
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.56
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.47
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.26
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.75
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.43
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.38
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.31
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.8
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.15
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.09
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.7
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.17
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.8
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.63
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.26
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	87.31
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.65
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	84.65
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.12
d1fu9a_	36	U-shaped transcription factor, different fingers {	81.09
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	80.9
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.72

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1e-16  Score=85.40  Aligned_cols=53  Identities=28%  Similarity=0.670  Sum_probs=46.4

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCCCCCCCCCCCCCCCCcccccccccccCChhHHHHHHHHc
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDFDQTQMPPASPRKPKTHECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      ||||.| .||+.|.....|..|+++|+++                         +||.|.+||++|.+.+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~e-------------------------kpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGL-------------------------RPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCC-------------------------CSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccc-------------------------cCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 5999999999999999999865                         5567777888888999999999887

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.4e-15  Score=72.52  Aligned_cols=37  Identities=24%  Similarity=0.534  Sum_probs=35.6

Q ss_pred             hhccccCCCceeecccccccCCChHHHHHhHHhcCCC
Q 031430           21 KVGETDQGKRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        21 ~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +|+++|++++||.|++||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5899999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.1e-14  Score=67.05  Aligned_cols=33  Identities=27%  Similarity=0.391  Sum_probs=31.4

Q ss_pred             CCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           78 SPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        78 ~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      .|+++|||.|.+||++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            388999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4e-14  Score=66.70  Aligned_cols=33  Identities=24%  Similarity=0.536  Sum_probs=31.7

Q ss_pred             ccCCCceeecccccccCCChHHHHHhHHhcCCC
Q 031430           25 TDQGKRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        25 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +|+|++||.|.+||+.|...+.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.3e-13  Score=66.61  Aligned_cols=35  Identities=26%  Similarity=0.369  Sum_probs=32.4

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHccccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      +.|+|++||.|.+||++|.+.+.|..|+++|++++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46899999999999999999999999999998763

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.6e-13  Score=67.17  Aligned_cols=34  Identities=26%  Similarity=0.520  Sum_probs=32.5

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ..|++++||.|++||++|.+.+.|..|+++|+||
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6789999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=1.3e-13  Score=67.00  Aligned_cols=35  Identities=26%  Similarity=0.521  Sum_probs=33.2

Q ss_pred             hccccCCCceeecccccccCCChHHHHHhHHhcCC
Q 031430           22 VGETDQGKRVFACKTCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        22 h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      |.++|+||+||.|++|++.|..+++|..|++.|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            68999999999999999999999999999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.2e-13  Score=65.73  Aligned_cols=34  Identities=32%  Similarity=0.602  Sum_probs=32.3

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcCCC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      ++|+|++||+|.+|+++|...++|..|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5899999999999999999999999999999865

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.3e-13  Score=66.55  Aligned_cols=37  Identities=22%  Similarity=0.443  Sum_probs=34.0

Q ss_pred             CCceeecccccccCCChHHHHHhHH-hcCCCCccccCC
Q 031430           28 GKRVFACKTCNKEFPSFQALGGHRA-SHKKPKLMTMAS   64 (159)
Q Consensus        28 ~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~   64 (159)
                      -++||.|.+||+.|...++|..|++ +|++++||.|+.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4799999999999999999999976 799999999963

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.8e-13  Score=65.75  Aligned_cols=36  Identities=25%  Similarity=0.444  Sum_probs=33.3

Q ss_pred             CCCcccccccccccCChhHHHHHHH-HcccccCCCcc
Q 031430           81 KPKTHECSICGLEFAIGQALGGHMR-RHRAAAAMGAV  116 (159)
Q Consensus        81 ~~k~~~C~~Cgk~f~~~~~l~~H~~-~h~~~~~~~~~  116 (159)
                      .+|||.|.+||++|.+.++|..|++ +|++++||.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4799999999999999999999986 79999999874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=3.8e-13  Score=64.09  Aligned_cols=32  Identities=19%  Similarity=0.403  Sum_probs=30.5

Q ss_pred             CCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           79 PRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        79 ~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      |+|+|||.|.+||+.|.+.+.|..|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.32  E-value=4.6e-13  Score=61.21  Aligned_cols=29  Identities=28%  Similarity=0.568  Sum_probs=27.7

Q ss_pred             CcccccccccccCChhHHHHHHHHccccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      |||.|++||++|.+.+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=3.6e-13  Score=60.85  Aligned_cols=28  Identities=32%  Similarity=0.643  Sum_probs=26.9

Q ss_pred             CCcccccccccccCChhHHHHHHHHccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      +|||.|.+||++|.+.++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=7.2e-13  Score=60.45  Aligned_cols=29  Identities=24%  Similarity=0.526  Sum_probs=27.6

Q ss_pred             CcccccccccccCChhHHHHHHHHccccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      |||.|.+||++|.+.+.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999984

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=1.2e-12  Score=62.34  Aligned_cols=32  Identities=28%  Similarity=0.569  Sum_probs=30.5

Q ss_pred             cCCCceeecccccccCCChHHHHHhHHhcCCC
Q 031430           26 DQGKRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        26 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      |+|++||.|++|++.|..+++|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999864

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=1.7e-12  Score=62.98  Aligned_cols=33  Identities=24%  Similarity=0.405  Sum_probs=31.3

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      +.|+++|||.|.+||++|.+.+.|..|+++|..
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            779999999999999999999999999999975

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.3e-12  Score=62.01  Aligned_cols=32  Identities=19%  Similarity=0.469  Sum_probs=29.1

Q ss_pred             cccCCCceeecccccccCCChHHHHHhHHhcC
Q 031430           24 ETDQGKRVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        24 ~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      ++|+||+||.|+.|++.|..+++|..|++.+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            58999999999999999999999999976543

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.4e-12  Score=57.47  Aligned_cols=26  Identities=35%  Similarity=0.581  Sum_probs=24.9

Q ss_pred             CcccccccccccCChhHHHHHHHHcc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      |||+|.+||++|.+.+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=3.3e-12  Score=61.44  Aligned_cols=34  Identities=21%  Similarity=0.384  Sum_probs=29.8

Q ss_pred             CCCCCCCcccccccccccCChhHHHHHHHHcccc
Q 031430           77 ASPRKPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        77 ~~~~~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +.|+|++||.|++||+.|.+.+.|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4689999999999999999999999998655443

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=8.8e-13  Score=69.73  Aligned_cols=46  Identities=22%  Similarity=0.298  Sum_probs=42.4

Q ss_pred             ccchHHHHHHHHhhccccCCCceeecccccccCCChHHHHHhHHhc
Q 031430            9 AIDTANCLMLLSKVGETDQGKRVFACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus         9 ~~~~~~~~~~l~~h~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      ..+.|.....|..|+++|+|++||.|++||+.|...+.|..|+++|
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3467788899999999999999999999999999999999999876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=2.8e-12  Score=57.84  Aligned_cols=28  Identities=25%  Similarity=0.614  Sum_probs=26.8

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      ||||.|++|++.|..+++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.18  E-value=7.1e-12  Score=57.16  Aligned_cols=29  Identities=34%  Similarity=0.700  Sum_probs=27.6

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +||.|++|++.|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1e-11  Score=56.52  Aligned_cols=29  Identities=34%  Similarity=0.644  Sum_probs=27.6

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +||.|++|++.|..+++|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=7.6e-12  Score=63.74  Aligned_cols=39  Identities=21%  Similarity=0.428  Sum_probs=34.9

Q ss_pred             HHhhccccCCCceeeccc--ccccCCChHHHHHhHHhcCCCC
Q 031430           19 LSKVGETDQGKRVFACKT--CNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        19 l~~h~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      |..|+ .|++++||.|..  |++.|...++|..|+++|+|++
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45565 599999999987  9999999999999999999975

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3.4e-11  Score=55.08  Aligned_cols=28  Identities=29%  Similarity=0.659  Sum_probs=26.6

Q ss_pred             Ccccccc--cccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      |||.|+.  ||++|.+.++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899998  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.3e-11  Score=53.45  Aligned_cols=26  Identities=27%  Similarity=0.594  Sum_probs=24.7

Q ss_pred             ceeecccccccCCChHHHHHhHHhcC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      |||+|++||++|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999984

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.6e-11  Score=55.12  Aligned_cols=28  Identities=32%  Similarity=0.729  Sum_probs=26.4

Q ss_pred             Ccccccc--cccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      |||.|+.  ||++|.+.++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899987  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.5e-10  Score=53.43  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=26.7

Q ss_pred             Cccccc--ccccccCChhHHHHHHHHccccc
Q 031430           83 KTHECS--ICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        83 k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      |||.|+  .||++|.+.++|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999984

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=5.7e-11  Score=60.42  Aligned_cols=33  Identities=24%  Similarity=0.409  Sum_probs=30.8

Q ss_pred             CCCCCcccccc--cccccCChhHHHHHHHHccccc
Q 031430           79 PRKPKTHECSI--CGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        79 ~~~~k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      |.+++||.|..  ||+.|.+.++|..|+++|++++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            67899999987  9999999999999999999974

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.4e-10  Score=55.43  Aligned_cols=32  Identities=25%  Similarity=0.444  Sum_probs=30.2

Q ss_pred             eeccc--ccccCCChHHHHHhHHhcCCCCccccC
Q 031430           32 FACKT--CNKEFPSFQALGGHRASHKKPKLMTMA   63 (159)
Q Consensus        32 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~   63 (159)
                      |.|+.  |++.|..++.|.+|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78876  999999999999999999999999996

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.5e-10  Score=54.54  Aligned_cols=32  Identities=25%  Similarity=0.468  Sum_probs=29.5

Q ss_pred             ccccc--cccccCChhHHHHHHHHcccccCCCcc
Q 031430           85 HECSI--CGLEFAIGQALGGHMRRHRAAAAMGAV  116 (159)
Q Consensus        85 ~~C~~--Cgk~f~~~~~l~~H~~~h~~~~~~~~~  116 (159)
                      |.|+.  ||+.|.+.+.|.+|+++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  999999999999999999999999873

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=4.3e-10  Score=51.33  Aligned_cols=28  Identities=25%  Similarity=0.541  Sum_probs=26.6

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhcCCC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      |||.|+.  |++.|...++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899998  999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.87  E-value=8.9e-10  Score=51.01  Aligned_cols=29  Identities=21%  Similarity=0.439  Sum_probs=27.0

Q ss_pred             CCcccccc--cccccCChhHHHHHHHHcccc
Q 031430           82 PKTHECSI--CGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        82 ~k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ++||.|..  ||++|.+.++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999998  999999999999999999865

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5.4e-10  Score=51.07  Aligned_cols=28  Identities=29%  Similarity=0.457  Sum_probs=26.4

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhcCCC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      |||.|+.  |++.|...++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=4.3e-10  Score=50.87  Aligned_cols=27  Identities=26%  Similarity=0.618  Sum_probs=25.4

Q ss_pred             Ccccccc--cccccCChhHHHHHHHHccc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      |||.|+.  ||++|.+.++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.8e-09  Score=49.66  Aligned_cols=29  Identities=34%  Similarity=0.675  Sum_probs=26.6

Q ss_pred             ceeecc--cccccCCChHHHHHhHHhcCCCC
Q 031430           30 RVFACK--TCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        30 k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      +||.|+  .|++.|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.4e-09  Score=48.63  Aligned_cols=26  Identities=27%  Similarity=0.577  Sum_probs=24.4

Q ss_pred             Ccccccc--cccccCChhHHHHHHHHcc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h~  108 (159)
                      |||.|+.  ||++|.+.++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999985

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.69  E-value=5.3e-09  Score=45.09  Aligned_cols=27  Identities=33%  Similarity=0.609  Sum_probs=25.6

Q ss_pred             CCcccccccccccCChhHHHHHHHHcc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      ++||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=7.1e-09  Score=47.88  Aligned_cols=29  Identities=31%  Similarity=0.668  Sum_probs=26.8

Q ss_pred             Cceeeccc--ccccCCChHHHHHhHHhcCCC
Q 031430           29 KRVFACKT--CNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        29 ~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      |+||.|..  |++.|...++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999853

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=7.6e-09  Score=43.16  Aligned_cols=26  Identities=27%  Similarity=0.482  Sum_probs=24.3

Q ss_pred             eeecccccccCCChHHHHHhHHhcCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      |++|++|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=3.4e-09  Score=47.84  Aligned_cols=27  Identities=30%  Similarity=0.619  Sum_probs=25.3

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhcCC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h~~   56 (159)
                      |||.|+.  |++.|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999976

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=7.3e-09  Score=43.22  Aligned_cols=26  Identities=38%  Similarity=0.783  Sum_probs=24.2

Q ss_pred             cccccccccccCChhHHHHHHHHccc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      |..|+.||+.|+++..|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.3e-08  Score=45.41  Aligned_cols=26  Identities=35%  Similarity=0.689  Sum_probs=24.3

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhcC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h~   55 (159)
                      +||.|+.  |++.|...++|.+|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=6.4e-08  Score=43.25  Aligned_cols=33  Identities=27%  Similarity=0.386  Sum_probs=30.1

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccccCCC
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAAAAMG  114 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~~~  114 (159)
                      .+...|..||+.|...-+|.+|.-.|++++||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            456789999999999999999999999999984

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1.1e-07  Score=41.47  Aligned_cols=29  Identities=31%  Similarity=0.693  Sum_probs=27.3

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ++||.|++|+..|.++..+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.4e-07  Score=41.19  Aligned_cols=29  Identities=21%  Similarity=0.497  Sum_probs=27.2

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      |+||.|++|+..|..+..+..|++.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.7e-07  Score=39.82  Aligned_cols=27  Identities=30%  Similarity=0.539  Sum_probs=24.6

Q ss_pred             cccccccccccCChhHHHHHHHHcccc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ...|.+||++|...+.|++|+-+|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999999999999999885

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2.4e-07  Score=39.30  Aligned_cols=27  Identities=30%  Similarity=0.539  Sum_probs=24.8

Q ss_pred             eeecccccccCCChHHHHHhHHhcCCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      .+.|.+||+.|...+.|++|+..|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            468999999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=2.7e-07  Score=39.64  Aligned_cols=27  Identities=26%  Similarity=0.582  Sum_probs=25.1

Q ss_pred             CceeecccccccCCChHHHHHhHHhcC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      |+||.|+.||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999998885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.1e-07  Score=41.57  Aligned_cols=31  Identities=32%  Similarity=0.546  Sum_probs=28.7

Q ss_pred             ceeecccccccCCChHHHHHhHHhcCCCCcc
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHKKPKLM   60 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   60 (159)
                      +...|+.||+.|.....|.+|...|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4568999999999999999999999999997

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=7.3e-07  Score=37.98  Aligned_cols=29  Identities=24%  Similarity=0.485  Sum_probs=26.9

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      ++||+|..|...-.+.+.|..|++.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=8.5e-07  Score=37.77  Aligned_cols=29  Identities=28%  Similarity=0.407  Sum_probs=26.9

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      ++||+|..|...-...+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999975

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.11  E-value=8.9e-07  Score=36.40  Aligned_cols=24  Identities=33%  Similarity=0.668  Sum_probs=22.6

Q ss_pred             ccccccccccCChhHHHHHHHHcc
Q 031430           85 HECSICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      |.|..|.++|..+++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999986

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.2e-06  Score=41.29  Aligned_cols=27  Identities=26%  Similarity=0.492  Sum_probs=24.2

Q ss_pred             CCCCcccccccccccCChhHHHHHHHH
Q 031430           80 RKPKTHECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        80 ~~~k~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      +|.|||.|..||+.|.+..++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            478999999999999999999999753

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.6e-06  Score=36.43  Aligned_cols=27  Identities=26%  Similarity=0.474  Sum_probs=25.2

Q ss_pred             ccccccccccCChhHHHHHHHHccccc
Q 031430           85 HECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      |.|+.||......+.|..|++.|+++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999873

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.98  E-value=2.5e-06  Score=39.87  Aligned_cols=31  Identities=52%  Similarity=0.898  Sum_probs=27.6

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccccC
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAAAA  112 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~~  112 (159)
                      .+.|.|..|++.|.+..+|-.|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3679999999999999999999999987654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.7e-06  Score=36.54  Aligned_cols=27  Identities=19%  Similarity=0.433  Sum_probs=24.1

Q ss_pred             Ccccccc--cccccCChhHHHHHHHHccc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      +||.|..  |++++...++|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999997654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4.6e-06  Score=35.15  Aligned_cols=27  Identities=30%  Similarity=0.529  Sum_probs=25.3

Q ss_pred             CcccccccccccCChhHHHHHHHHccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      +||.|..|+..-...++|..|+|+|..
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccccccchhcchhhHhhhhhcccC
Confidence            799999999999999999999999963

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.80  E-value=9e-06  Score=33.31  Aligned_cols=24  Identities=33%  Similarity=0.726  Sum_probs=22.4

Q ss_pred             eecccccccCCChHHHHHhHHhcC
Q 031430           32 FACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      |+|..|++.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999885

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=1.1e-05  Score=33.63  Aligned_cols=26  Identities=31%  Similarity=0.511  Sum_probs=24.3

Q ss_pred             cccccccccCChhHHHHHHHHccccc
Q 031430           86 ECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        86 ~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      .|+.|.++|..+-.|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999974

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=1.3e-05  Score=33.39  Aligned_cols=26  Identities=38%  Similarity=0.556  Sum_probs=24.1

Q ss_pred             ecccccccCCChHHHHHhHHhcCCCC
Q 031430           33 ACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      .|+.|.+.|..+..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999999874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.75  E-value=1.1e-05  Score=34.40  Aligned_cols=25  Identities=28%  Similarity=0.541  Sum_probs=22.7

Q ss_pred             Ccccccc--cccccCChhHHHHHHHHc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h  107 (159)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5788886  999999999999999987

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=2.4e-05  Score=33.34  Aligned_cols=27  Identities=19%  Similarity=0.418  Sum_probs=25.0

Q ss_pred             eecccccccCCChHHHHHhHHhcCCCC
Q 031430           32 FACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      |.|+.||......+-|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999863

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=8.9e-06  Score=35.64  Aligned_cols=28  Identities=25%  Similarity=0.433  Sum_probs=24.6

Q ss_pred             Ccccccc--cccccCChhHHHHHH-HHcccc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHM-RRHRAA  110 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~-~~h~~~  110 (159)
                      +||.|..  |+|.|.+.+....|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899987  999999999999997 888754

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.4e-05  Score=36.70  Aligned_cols=26  Identities=23%  Similarity=0.530  Sum_probs=23.6

Q ss_pred             CCCceeecccccccCCChHHHHHhHH
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRA   52 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~   52 (159)
                      +|.+||.|..|++.|....++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47899999999999999999999864

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.51  E-value=4.3e-05  Score=35.57  Aligned_cols=30  Identities=43%  Similarity=0.905  Sum_probs=26.6

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKPK   58 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (159)
                      .+.|.|..|++.|.+...|--|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999997654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=4.7e-05  Score=31.98  Aligned_cols=26  Identities=27%  Similarity=0.542  Sum_probs=24.4

Q ss_pred             ceeecccccccCCChHHHHHhHHhcC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      +||+|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=3.9e-05  Score=32.71  Aligned_cols=24  Identities=25%  Similarity=0.605  Sum_probs=22.1

Q ss_pred             cccccccccccCChhHHHHHHHHc
Q 031430           84 THECSICGLEFAIGQALGGHMRRH  107 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h  107 (159)
                      ||.|..|+.+|..+.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            789999999999999999999853

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=6.2e-05  Score=32.58  Aligned_cols=27  Identities=22%  Similarity=0.529  Sum_probs=24.0

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhcCC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h~~   56 (159)
                      +||.|..  |++.|...++|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999997654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=3.5e-05  Score=32.92  Aligned_cols=28  Identities=36%  Similarity=0.736  Sum_probs=25.0

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhcCCC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +||.|..  |++.|.....|.+|...|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5888876  999999999999999999874

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=6.9e-05  Score=34.63  Aligned_cols=28  Identities=29%  Similarity=0.583  Sum_probs=25.0

Q ss_pred             CCCcccccc--cccccCChhHHHHHHHHcc
Q 031430           81 KPKTHECSI--CGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        81 ~~k~~~C~~--Cgk~f~~~~~l~~H~~~h~  108 (159)
                      .+|||.|..  |+.+|.+..+|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            479999954  9999999999999999886

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.34  E-value=6.2e-05  Score=32.11  Aligned_cols=28  Identities=25%  Similarity=0.377  Sum_probs=24.9

Q ss_pred             Ccccccc--cccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSI--CGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~--Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +||.|..  |.+.|...-+|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788876  999999999999999999875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=0.00011  Score=31.23  Aligned_cols=29  Identities=31%  Similarity=0.575  Sum_probs=26.6

Q ss_pred             CceeecccccccCCChHHHHHhHHhcCCC
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +..|.|..|...|...-.|..|+..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.33  E-value=7.7e-05  Score=31.67  Aligned_cols=25  Identities=28%  Similarity=0.574  Sum_probs=22.5

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhc
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASH   54 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h   54 (159)
                      .||+|+.  |++.|...+.|++|...|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899986  999999999999998876

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.21  E-value=0.00011  Score=32.10  Aligned_cols=26  Identities=23%  Similarity=0.514  Sum_probs=22.6

Q ss_pred             cccccccccccCChhHHHHHHHH-ccc
Q 031430           84 THECSICGLEFAIGQALGGHMRR-HRA  109 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~-h~~  109 (159)
                      ||.|.+|++.|.+..-|.+|++. |.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            79999999999999999999864 544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.00023  Score=30.19  Aligned_cols=29  Identities=28%  Similarity=0.463  Sum_probs=26.4

Q ss_pred             CCcccccccccccCChhHHHHHHHHcccc
Q 031430           82 PKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        82 ~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +.-|.|..|...|.+.-.|..||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45689999999999999999999999885

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00019  Score=30.51  Aligned_cols=24  Identities=29%  Similarity=0.504  Sum_probs=22.1

Q ss_pred             eeecccccccCCChHHHHHhHHhc
Q 031430           31 VFACKTCNKEFPSFQALGGHRASH   54 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h   54 (159)
                      ||.|..|...|..+.+|..|+...
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999998764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00032  Score=29.94  Aligned_cols=26  Identities=15%  Similarity=0.399  Sum_probs=22.8

Q ss_pred             ceeecccccccCCChHHHHHhHHhcC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      +||.|..|.......++|+.|+....
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            68999999988888999999998743

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.0002  Score=29.93  Aligned_cols=22  Identities=32%  Similarity=0.532  Sum_probs=20.0

Q ss_pred             eeecccccccCCChHHHHHhHH
Q 031430           31 VFACKTCNKEFPSFQALGGHRA   52 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~   52 (159)
                      ||.|..||+.|..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999998864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.96  E-value=0.00028  Score=30.75  Aligned_cols=26  Identities=27%  Similarity=0.551  Sum_probs=22.5

Q ss_pred             eeecccccccCCChHHHHHhHHh-cCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRAS-HKK   56 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~-h~~   56 (159)
                      ||.|.+|++.|....-|.+|+.. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            79999999999999999999764 544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00062  Score=29.02  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=23.8

Q ss_pred             CcccccccccccCChhHHHHHHHHccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      +||.|..|.......++|+-|+++-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            689999999999999999999986544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00044  Score=29.00  Aligned_cols=26  Identities=31%  Similarity=0.432  Sum_probs=23.6

Q ss_pred             cccccccccccCChhHHHHHHHHccc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      |-+|.+|..+.+++.+|+.|.|+|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999964

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00016  Score=31.53  Aligned_cols=27  Identities=22%  Similarity=0.639  Sum_probs=22.9

Q ss_pred             ceeeccc--ccccCCChHHHHHhH-HhcCC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHR-ASHKK   56 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~-~~h~~   56 (159)
                      +||.|..  |.|.|...+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899988  999999999888887 77764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00039  Score=29.58  Aligned_cols=26  Identities=23%  Similarity=0.424  Sum_probs=22.9

Q ss_pred             ceeecccccccCCChHHHHHhHHhcC
Q 031430           30 RVFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      +||+|..|.....+.++|..|++.-.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            58999999999999999999987643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.00045  Score=28.09  Aligned_cols=22  Identities=32%  Similarity=0.588  Sum_probs=20.6

Q ss_pred             cccccccccccCChhHHHHHHH
Q 031430           84 THECSICGLEFAIGQALGGHMR  105 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~  105 (159)
                      ||.|.-|...|.++..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999984

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.00052  Score=28.60  Aligned_cols=23  Identities=30%  Similarity=0.494  Sum_probs=20.5

Q ss_pred             cccccccccccCChhHHHHHHHH
Q 031430           84 THECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      ||.|..||+.+.++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999988653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00062  Score=31.35  Aligned_cols=28  Identities=25%  Similarity=0.642  Sum_probs=24.6

Q ss_pred             CCceeeccc--ccccCCChHHHHHhHHhcC
Q 031430           28 GKRVFACKT--CNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        28 ~~k~~~C~~--C~~~f~~~~~l~~h~~~h~   55 (159)
                      .++||.|..  |+..|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            479999955  9999999999999988774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.37  E-value=0.0011  Score=26.85  Aligned_cols=23  Identities=22%  Similarity=0.573  Sum_probs=20.7

Q ss_pred             ceeecccccccCCChHHHHHhHH
Q 031430           30 RVFACKTCNKEFPSFQALGGHRA   52 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~   52 (159)
                      .||+|..|...|.++..|..|+.
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999864

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0015  Score=27.76  Aligned_cols=27  Identities=19%  Similarity=0.568  Sum_probs=23.1

Q ss_pred             CcccccccccccCChhHHHHHHHHccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      +||.|..|..--.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            689999999999999999999875443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0024  Score=30.84  Aligned_cols=26  Identities=27%  Similarity=0.542  Sum_probs=23.0

Q ss_pred             cccccccccccCChhHHHHHHHHccc
Q 031430           84 THECSICGLEFAIGQALGGHMRRHRA  109 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~h~~  109 (159)
                      -|.|..|||.|.....|++|..-|--
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            47899999999999999999887754

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0041  Score=27.59  Aligned_cols=28  Identities=21%  Similarity=0.450  Sum_probs=24.1

Q ss_pred             CcccccccccccCChhHHHHHHHHcccc
Q 031430           83 KTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      -.|.|..||+.|.+...+.+|.....|.
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCCC
Confidence            3589999999999999999998877664

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.0053  Score=25.60  Aligned_cols=26  Identities=27%  Similarity=0.289  Sum_probs=23.0

Q ss_pred             eeecccccccCCChHHHHHhHHhcCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      |-+|+.|......+..|+.|.++|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999998853

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.0059  Score=27.06  Aligned_cols=26  Identities=23%  Similarity=0.570  Sum_probs=23.3

Q ss_pred             eeecccccccCCChHHHHHhHHhcCC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      .|.|..|++.|.....+.+|-....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999999887665

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.28  E-value=0.0071  Score=25.98  Aligned_cols=28  Identities=29%  Similarity=0.548  Sum_probs=23.7

Q ss_pred             Cccccc--ccccccCChhHHHHHHHHcccc
Q 031430           83 KTHECS--ICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        83 k~~~C~--~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +.|.|.  .|+-.|...+.|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            446665  4999999999999999999885

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.25  E-value=0.0081  Score=24.34  Aligned_cols=22  Identities=27%  Similarity=0.569  Sum_probs=20.1

Q ss_pred             eecccccccCCChHHHHHhHHh
Q 031430           32 FACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      |.|+.|-+.|..+.++..|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999765

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.0057  Score=27.38  Aligned_cols=24  Identities=38%  Similarity=0.376  Sum_probs=19.5

Q ss_pred             ccccccccCChhHHHHHHHHcccc
Q 031430           87 CSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        87 C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      |.-=++.|...-.|..|+|+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456788999999999999986

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.0088  Score=26.74  Aligned_cols=21  Identities=19%  Similarity=0.067  Sum_probs=18.0

Q ss_pred             ccccCCChHHHHHhHHhcCCC
Q 031430           37 CNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        37 C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      -++.|.....|..|+|.|+|+
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            356799999999999999885

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.56  E-value=0.01  Score=26.00  Aligned_cols=23  Identities=26%  Similarity=0.560  Sum_probs=20.5

Q ss_pred             CcccccccccccCChhHHHHHHH
Q 031430           83 KTHECSICGLEFAIGQALGGHMR  105 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~  105 (159)
                      -.|.|.-||-.|+..+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45899999999999999999975

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.013  Score=28.18  Aligned_cols=25  Identities=32%  Similarity=0.654  Sum_probs=22.7

Q ss_pred             eeecccccccCCChHHHHHhHHhcC
Q 031430           31 VFACKTCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~   55 (159)
                      .|.|..|+|.|.....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5789999999999999999988774

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.016  Score=24.16  Aligned_cols=20  Identities=25%  Similarity=0.373  Sum_probs=17.8

Q ss_pred             ccccccCChhHHHHHHHHcc
Q 031430           89 ICGLEFAIGQALGGHMRRHR  108 (159)
Q Consensus        89 ~Cgk~f~~~~~l~~H~~~h~  108 (159)
                      -|++-|...+++..|+.+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            39999999999999998873

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.75  E-value=0.02  Score=25.00  Aligned_cols=24  Identities=33%  Similarity=0.574  Sum_probs=20.7

Q ss_pred             ceeecccccccCCChHHHHHhHHh
Q 031430           30 RVFACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        30 k~~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      ..|.|..||-.|...+.|..|+..
T Consensus         7 arf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             cceeccccceeecChhHHHhhhhe
Confidence            358899999999999999998643

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.43  E-value=0.024  Score=23.31  Aligned_cols=24  Identities=33%  Similarity=0.735  Sum_probs=19.7

Q ss_pred             eecc--cccccCCChHHHHHhHHhcC
Q 031430           32 FACK--TCNKEFPSFQALGGHRASHK   55 (159)
Q Consensus        32 ~~C~--~C~~~f~~~~~l~~h~~~h~   55 (159)
                      |.|.  -|++.|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5564  49999999999999988775

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.38  E-value=0.028  Score=24.02  Aligned_cols=28  Identities=18%  Similarity=0.441  Sum_probs=23.5

Q ss_pred             ceeeccc--ccccCCChHHHHHhHHhcCCC
Q 031430           30 RVFACKT--CNKEFPSFQALGGHRASHKKP   57 (159)
Q Consensus        30 k~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (159)
                      +.|.|..  |+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577754  999999999999999999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.31  E-value=0.036  Score=22.34  Aligned_cols=22  Identities=23%  Similarity=0.498  Sum_probs=20.0

Q ss_pred             ccccccccccCChhHHHHHHHH
Q 031430           85 HECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        85 ~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      |.|+.|=+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6799999999999999999875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.041  Score=22.74  Aligned_cols=23  Identities=30%  Similarity=0.606  Sum_probs=20.7

Q ss_pred             cccccccccccCChhHHHHHHHH
Q 031430           84 THECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      .|.|+.|+-...+++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999999999999999875

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.15  E-value=0.1  Score=21.85  Aligned_cols=23  Identities=17%  Similarity=0.356  Sum_probs=19.8

Q ss_pred             cccccccccccCChhHHHHHHHH
Q 031430           84 THECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        84 ~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      .|.|..||+........+.|.-.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            47899999999999999998654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.09  E-value=0.087  Score=25.13  Aligned_cols=31  Identities=19%  Similarity=0.330  Sum_probs=26.1

Q ss_pred             CCCcccccccccccCChhHHHHHHHHccccc
Q 031430           81 KPKTHECSICGLEFAIGQALGGHMRRHRAAA  111 (159)
Q Consensus        81 ~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~~  111 (159)
                      .+.|-.|++|+....+..+|.+|+..-+-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            4788999999999999999999998655443

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.70  E-value=0.051  Score=24.01  Aligned_cols=27  Identities=19%  Similarity=0.657  Sum_probs=23.1

Q ss_pred             CCCceeecccccccCCChHHHHHhHHh
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      .|+..|.|.+|.+.|..-+++-+|-..
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            356789999999999999999998654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.17  E-value=0.12  Score=26.64  Aligned_cols=40  Identities=13%  Similarity=0.276  Sum_probs=26.6

Q ss_pred             CCCceeecccccccCCChHHHHHhHHhcCCCCccccCCCCCCC
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRASHKKPKLMTMASSGEDF   69 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f   69 (159)
                      +....|.|+.|++.|.....+.   ..-.....|.|..|+...
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBC
T ss_pred             ccCCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCEE
Confidence            3455799999999986554432   233344578899987654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.80  E-value=0.044  Score=28.78  Aligned_cols=24  Identities=29%  Similarity=0.502  Sum_probs=21.0

Q ss_pred             CcccccccccccCChhHHHHHHHH
Q 031430           83 KTHECSICGLEFAIGQALGGHMRR  106 (159)
Q Consensus        83 k~~~C~~Cgk~f~~~~~l~~H~~~  106 (159)
                      -.|-|..|++.|.+...|..|.+.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            448899999999999999999763

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.63  E-value=0.12  Score=21.57  Aligned_cols=18  Identities=33%  Similarity=0.449  Sum_probs=15.7

Q ss_pred             cccccccCChhHHHHHHH
Q 031430           88 SICGLEFAIGQALGGHMR  105 (159)
Q Consensus        88 ~~Cgk~f~~~~~l~~H~~  105 (159)
                      +-||+.|++...|..|.+
T Consensus         6 ~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTTCCEESSHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHH
Confidence            359999999999998876

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.26  E-value=0.22  Score=23.65  Aligned_cols=27  Identities=19%  Similarity=0.283  Sum_probs=23.8

Q ss_pred             CCCceeecccccccCCChHHHHHhHHh
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      ..+.|-.|+.|+....++.+|.+|+..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            357789999999999999999999865

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.31  E-value=0.099  Score=23.77  Aligned_cols=9  Identities=11%  Similarity=0.039  Sum_probs=4.4

Q ss_pred             ccccCCCCC
Q 031430           59 LMTMASSGE   67 (159)
Q Consensus        59 ~~~c~~c~~   67 (159)
                      .|.|..||.
T Consensus         5 ~~vC~vCGy   13 (36)
T d1yuza2           5 FHLCPICGY   13 (36)
T ss_dssp             EEECSSSCC
T ss_pred             EEECCCCCC
Confidence            345555553

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.65  E-value=0.11  Score=23.80  Aligned_cols=10  Identities=10%  Similarity=0.089  Sum_probs=5.0

Q ss_pred             ccccCCCCCC
Q 031430           59 LMTMASSGED   68 (159)
Q Consensus        59 ~~~c~~c~~~   68 (159)
                      .|.|..||..
T Consensus         5 ~~~C~vCG~i   14 (37)
T d1nnqa2           5 VYICPICGYT   14 (37)
T ss_dssp             EEECTTTCCE
T ss_pred             EEECCCCCCE
Confidence            3555555543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.65  E-value=0.13  Score=26.96  Aligned_cols=25  Identities=24%  Similarity=0.377  Sum_probs=21.2

Q ss_pred             CceeecccccccCCChHHHHHhHHh
Q 031430           29 KRVFACKTCNKEFPSFQALGGHRAS   53 (159)
Q Consensus        29 ~k~~~C~~C~~~f~~~~~l~~h~~~   53 (159)
                      .-.|-|..|++.|.....|..|.++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3458899999999999999999753

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.12  E-value=0.2  Score=25.66  Aligned_cols=30  Identities=20%  Similarity=0.421  Sum_probs=26.3

Q ss_pred             CCCcccccccccccCChhHHHHHHHHcccc
Q 031430           81 KPKTHECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        81 ~~k~~~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      +...|.|..|.-.|..-..|..|+-.|.++
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            456799999999999999999999998764

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.09  E-value=0.79  Score=20.27  Aligned_cols=25  Identities=20%  Similarity=0.317  Sum_probs=21.0

Q ss_pred             cccccccccCChhHHHHHHHHcccc
Q 031430           86 ECSICGLEFAIGQALGGHMRRHRAA  110 (159)
Q Consensus        86 ~C~~Cgk~f~~~~~l~~H~~~h~~~  110 (159)
                      =|..|+-.|.....+..|.+.....
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk~YCss   34 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQFYCKN   34 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTSCC
T ss_pred             HHhhCCceehhHHHHHHHHHhcccC
Confidence            3889999999999999998865544

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=80.90  E-value=0.6  Score=19.36  Aligned_cols=22  Identities=23%  Similarity=0.588  Sum_probs=18.1

Q ss_pred             eeeccc--ccccCCChHHHHHhHH
Q 031430           31 VFACKT--CNKEFPSFQALGGHRA   52 (159)
Q Consensus        31 ~~~C~~--C~~~f~~~~~l~~h~~   52 (159)
                      .|.|..  |+-.|..+.+++.|..
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfn   25 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHh
Confidence            467765  9999999999998864

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.72  E-value=0.78  Score=23.36  Aligned_cols=30  Identities=23%  Similarity=0.522  Sum_probs=25.4

Q ss_pred             CCCceeecccccccCCChHHHHHhHHhcCC
Q 031430           27 QGKRVFACKTCNKEFPSFQALGGHRASHKK   56 (159)
Q Consensus        27 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (159)
                      .+...|.|..|+..|.....|..|+..|..
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            344579999999999999999999988853