BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031431
(159 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E09|A Chain A, Solution Structure Of The Major Cherry Allergen Pru Av 1
Length = 159
Score = 159 bits (401), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV TYESE T +PP R+F A L +DNL KI P +K+ E+LEG+GGPG+IKK T E
Sbjct: 1 GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G Q Y KHKI+ DK N Y++IEG+ L D LEKIS+E + ASP+GGSI K+
Sbjct: 61 GSQYGYVKHKIDSIDKENYSYSYTLIEGDALGD-TLEKISYETKLVASPSGGSIIKSTSH 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG VE+ EE KAGKE+ + K +E YL+ +PD N
Sbjct: 120 YHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDAYN 159
>pdb|1H2O|A Chain A, Solution Structure Of The Major Cherry Allergen Pru Av 1
Mutant E45w
Length = 159
Score = 155 bits (393), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 104/160 (65%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV TYESE T +PP R+F A L +DNL KI P +K+ E+L G+GGPG+IKK T E
Sbjct: 1 GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILWGDGGPGTIKKITFGE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G Q Y KHKI+ DK N Y++IEG+ L D LEKIS+E + ASP+GGSI K+
Sbjct: 61 GSQYGYVKHKIDSIDKENYSYSYTLIEGDALGD-TLEKISYETKLVASPSGGSIIKSTSH 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG VE+ EE KAGKE+ + K +E YL+ +PD N
Sbjct: 120 YHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDAYN 159
>pdb|2LPX|A Chain A, Solution Structure Of Strawberry Allergen Fra A 1e
Length = 170
Score = 145 bits (367), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 104/161 (64%), Gaps = 3/161 (1%)
Query: 1 MGVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIV 58
MGV TYE+E T +P ++F A L +DNL KI P VK E+LEG+GGPG+IKK T
Sbjct: 1 MGVYTYENEFTSDIPAPKLFKAFVLDADNLIPKIAPQAVKCAEILEGDGGPGTIKKITFG 60
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
EG Y KHKI DKVN YS+IEG+ L++ +EKI +E + ++P+GG+I KT
Sbjct: 61 EGSHYGYVKHKIHSIDKVNHTYSYSLIEGDALSE-NIEKIDYETKLVSAPHGGTIIKTTS 119
Query: 119 KLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
K H KG+VE+ EE KAGKE+ + K +E YL+ +P N
Sbjct: 120 KYHTKGDVEIKEEHVKAGKEKAAHLFKLIEGYLKDHPSEYN 160
>pdb|4A8U|A Chain A, Crystal Structure Of Native Birch Pollen Allergen Bet V 1
Isoform J
pdb|4A8V|A Chain A, Crystal Structure Of Birch Pollen Allergen Bet V 1 Isoform
J In Complex With 8-Anilinonaphthalene-1-Sulfonate (Ans)
Length = 159
Score = 136 bits (343), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P AR+F A L DNL K+ P + +VE +EGNGGPG+IKK + E
Sbjct: 1 GVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+PNGGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD-TLEKISNEIKIVATPNGGSILKINNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG+ EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|4A84|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
F30v Mutant In Complex With Deoxycholate
Length = 159
Score = 136 bits (342), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P AR+F A L DNL K+ P + +VE +EGNGGPG+IKK + E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+P+GGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD-TLEKISNEIKIVATPDGGSILKISNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG+ EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|4A80|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With 8-Anilinonaphthalene-1-Sulfonate (Ans)
pdb|4A81|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Ternary Complex With 8-Anilinonaphthalene-1-Sulfonate
( Ans) And Deoxycholic Acid
pdb|4A83|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Deoxycholate.
pdb|4A85|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Kinetin.
pdb|4A86|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Ternary Complex With Kinetin And
8-Anilinonaphthalene-1- Sulfonate (Ans)
pdb|4A87|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Naringenin.
pdb|4A88|A Chain A, Crystal Structure Of Native Major Birch Pollen Allergen
Bet V 1 Isoform A
pdb|4A8G|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Dimethylbenzylammonium Propane Sulfonate
Length = 159
Score = 136 bits (342), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P AR+F A L DNL K+ P + +VE +EGNGGPG+IKK + E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+P+GGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD-TLEKISNEIKIVATPDGGSILKISNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG+ EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1FSK|A Chain A, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|D Chain D, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|G Chain G, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|J Chain J, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1BV1|A Chain A, Birch Pollen Allergen Bet V 1
pdb|1BTV|A Chain A, Structure Of Bet V 1, Nmr, 20 Structures
Length = 159
Score = 135 bits (341), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P AR+F A L DNL K+ P + +VE +EGNGGPG+IKK + E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+P+GGSI K K
Sbjct: 61 GLPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD-TLEKISNEIKIVATPDGGSILKISNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG+ EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1B6F|A Chain A, Birch Pollen Allergen Bet V 1
Length = 159
Score = 135 bits (341), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P AR+F A L DNL K+ P + +VE +EGNGGPG+IKK + E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+P+GGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD-TLEKISNEIKIVATPDGGSILKISNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG+ EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGDHEVKAEQVKASKELGETLLRAVESYLLAHSDAYN 159
>pdb|1LLT|A Chain A, Birch Pollen Allergen Bet V 1 Mutant E45s
Length = 159
Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P AR+F A L DNL K+ P + +VE + GNGGPG+IKK + E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENISGNGGPGTIKKISFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+P+GGSI K K
Sbjct: 61 GLPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD-TLEKISNEIKIVATPDGGSILKISNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG+ EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|2QIM|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2b From Yellow Lupine In Complex With Cytokinin
pdb|3E85|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2b From Yellow Lupine In Complex With
Diphenylurea
Length = 158
Score = 133 bits (335), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 100/159 (62%), Gaps = 6/159 (3%)
Query: 1 MGVVTYESEETYAVPPARMFNALASDN---LPSKIFPDVVKNVEVLEGNGGPGSIKKFTI 57
MGV T++ E T + PA+++ AL +D +P + + +++VE++EGNGGPG+IKK T
Sbjct: 1 MGVFTFQDEYTSTIAPAKLYKALVTDADIIIPKAV--ETIQSVEIVEGNGGPGTIKKLTF 58
Query: 58 VEGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTI 117
+EGG+ KY HKIE D+ NL YS++ G L D +EKISFE + NGGSI K
Sbjct: 59 IEGGESKYVLHKIEAIDEANLGYNYSIVGGVGLPD-TIEKISFETKLVEGANGGSIGKVT 117
Query: 118 CKLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPD 156
K+ KG+ + EE+ KA K R K +E+YL A+PD
Sbjct: 118 IKIETKGDAQPNEEEGKAAKARGDAFFKAIESYLSAHPD 156
>pdb|1XDF|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2a From Yellow Lupine
pdb|1XDF|B Chain B, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2a From Yellow Lupine
Length = 157
Score = 132 bits (332), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 97/158 (61%), Gaps = 6/158 (3%)
Query: 2 GVVTYESEETYAVPPARMFNALASDNLPSKIFP---DVVKNVEVLEGNGGPGSIKKFTIV 58
GV T+E E T + PAR++ AL D I P + ++++E +EGNGGPG+IKK T++
Sbjct: 1 GVFTFEDESTSTIAPARLYKALVKD--ADAIIPKAVEAIQSIETVEGNGGPGTIKKLTLI 58
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
EGG+ KY HKIE D+ NL+ YS++ G L D +EKISFE + NGGSI K
Sbjct: 59 EGGETKYVLHKIEAVDEANLRYNYSIVGGVGLPD-TIEKISFETKLVEGANGGSIGKVTI 117
Query: 119 KLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPD 156
K+ KG+ + EE+ KA K R K +E YL A+P+
Sbjct: 118 KIETKGDAQPNEEEGKAAKARGDAFFKAIENYLSAHPE 155
>pdb|1FM4|A Chain A, Crystal Structure Of The Birch Pollen Allergen Bet V 1l
Length = 159
Score = 130 bits (326), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P ARMF A L D L K+ P + +VE +EGNGGPG+IKK E
Sbjct: 1 GVFNYETEATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+P+GG + K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD-TLEKISNEIKIVATPDGGCVLKISNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1QMR|A Chain A, Birch Pollen Allergen Bet V 1 Mutant N28t, K32q, E45s,
P108g
Length = 159
Score = 127 bits (318), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 2 GVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV YE+E T +P AR+F A L D L ++ P + +VE + GNGGPG+IKK + E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDTLFPQVAPQAISSVENISGNGGPGTIKKISFPE 60
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G KY K +++E D N K YSVIEG + D LEKIS E + A+ +GGSI K K
Sbjct: 61 GLPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD-TLEKISNEIKIVATGDGGSILKISNK 119
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 159
H KG+ EV EQ KA KE +++ VE+YL A+ D N
Sbjct: 120 YHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|2K7H|A Chain A, Nmr Solution Structure Of Soybean Allergen Gly M 4
Length = 157
Score = 122 bits (307), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Query: 2 GVVTYESEETYAVPPARMFNALASDNLPSKIFP---DVVKNVEVLEGNGGPGSIKKFTIV 58
GV T+E E V PA ++ AL +D + P D K+VE +EGNGGPG+IKK T +
Sbjct: 1 GVFTFEDEINSPVAPATLYKALVTD--ADNVIPKALDSFKSVENVEGNGGPGTIKKITFL 58
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
E G+ K+ HKIE D+ NL YSV+ G L D EKI+F+ + A PNGGS K
Sbjct: 59 EDGETKFVLHKIESIDEANLGYSYSVVGGAALPD-TAEKITFDSKLVAGPNGGSAGKLTV 117
Query: 119 KLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPD 156
K KG+ E +++ K GK + + K +EAYL A+PD
Sbjct: 118 KYETKGDAEPNQDELKTGKAKADALFKAIEAYLLAHPD 155
>pdb|1IFV|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1b From Yellow Lupine
pdb|1IFV|B Chain B, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1b From Yellow Lupine
Length = 155
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 95/160 (59%), Gaps = 11/160 (6%)
Query: 2 GVVTYESEETYAVPPARMFNALASDNLPSKIFPDVV---KNVEVLEGNGGPGSIKKFTIV 58
GV +E E AV A++F AL D+ I P V+ ++VE++EGNGGPG++KK T
Sbjct: 1 GVFAFEDEHPSAVAQAKLFKALTKDS--DDIIPKVIEQIQSVEIVEGNGGPGTVKKITAS 58
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
GG Y HKI+ D+ + + YS++ G L D LEKI+FE + + P+GGSI K
Sbjct: 59 HGGHTSYVLHKIDAIDEASFEYNYSIVGGTGL-DESLEKITFESKLLSGPDGGSIGKIKV 117
Query: 119 KLHAKGEV--EVTEEQAKAGKERVLGVVKGVEAYLQANPD 156
K H KG+V + E+AKA R G+ K VE Y+ ANP+
Sbjct: 118 KFHTKGDVLSDAVREEAKA---RGTGLFKAVEGYVLANPN 154
>pdb|1ICX|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1a From Yellow Lupine
Length = 155
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 2 GVVTYESEETYAVPPARMFNALASDNLPSKIFPDVV---KNVEVLEGNGGPGSIKKFTIV 58
G+ +E+E++ V PA+++ AL D+ +I P V+ ++VE++EGNGGPG+IKK +
Sbjct: 1 GIFAFENEQSSTVAPAKLYKALTKDS--DEIVPKVIEPIQSVEIVEGNGGPGTIKKIIAI 58
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
G + HK++ D+ NL YS+I G L D LEKIS+E + P+GGSI K
Sbjct: 59 HDGHTSFVLHKLDAIDEANLTYNYSIIGGEGL-DESLEKISYESKILPGPDGGSIGKINV 117
Query: 119 KLHAKGEV--EVTEEQAKAGKERVLGVVKGVEAYLQANPD 156
K H KG+V E +QAK + LG+ K +E Y+ A+PD
Sbjct: 118 KFHTKGDVLSETVRDQAKF---KGLGLFKAIEGYVLAHPD 154
>pdb|3RWS|A Chain A, Crystal Structure Of Medicago Truncatula Nodulin 13
(Mtn13) In Complex With Trans-Zeatin
Length = 168
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Query: 1 MGVVTYESEETYAVPPARMFNALASDN--LPSKIFPDVVKNVEVLEGNGGPGSIKKFTIV 58
MGV+T ESE ++ +++ + D + K P ++ E LEG+GGPG+IKK T V
Sbjct: 6 MGVITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFV 65
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
G K I+ D+ N YSV EG L+D LEKI FE + +P G I K+
Sbjct: 66 --GDFGSTKQHIDMVDRENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEEGCIVKSTT 123
Query: 119 KLHAKG-EVEVTEEQAKAGKERVLGVVKGVEAYLQANPD 156
K + KG ++E++++ +AG ER G K VE++L ANPD
Sbjct: 124 KYYTKGDDIELSKDYLEAGIERFEGFTKAVESFLLANPD 162
>pdb|1TW0|A Chain A, Native Crystal Structure Of Spe16
pdb|1TW0|B Chain B, Native Crystal Structure Of Spe16
pdb|1TXC|A Chain A, Complex Crystal Structure Of Spe16 With Ans
pdb|1TXC|B Chain B, Complex Crystal Structure Of Spe16 With Ans
Length = 157
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 4/156 (2%)
Query: 2 GVVTYESEETYAVPPARMFNALA--SDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIVE 59
GV + E + +V PA+++ AL SD + KI ++++E++EGNGG G+IKK T E
Sbjct: 1 GVFVFRDETSSSVAPAKLYKALTKDSDTIAQKI-DGPIQSIELVEGNGGVGTIKKITANE 59
Query: 60 GGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTICK 119
G + + K++ D+ NL YS++ G L + LEK+SFE + A GGSI K K
Sbjct: 60 GDKTSFVLQKVDAIDEANLGYDYSIVGGTGLPE-SLEKLSFETKVVAGSGGGSISKVTLK 118
Query: 120 LHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANP 155
H KG+ +++ + G K +E Y+ ANP
Sbjct: 119 FHTKGDAPLSDAVRDDALAKGAGFFKAIEGYVLANP 154
>pdb|3IE5|A Chain A, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
pdb|3IE5|B Chain B, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
Length = 165
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Query: 1 MGVVTYESEETYAVPPARMFNALASD--NLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIV 58
M T EE + P R+F AL + + K P V K+ E++EG+GG G++ K T V
Sbjct: 7 MAAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFV 66
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
+G + Y HK +E D N KY++ EG+ L D +EK+ +E + A GGS K
Sbjct: 67 DGHPLTYMLHKFDEIDAANFYCKYTLFEGDVLRD-NIEKVVYEVKLEAV-GGGSKGKITV 124
Query: 119 KLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDV 157
H K V EE+ K G+++ K VE YL ANP+V
Sbjct: 125 TYHPKPGCTVNEEEVKIGEKKAYEFYKQVEEYLAANPEV 163
>pdb|2BK0|A Chain A, Crystal Structure Of The Major Celery Allergen Api G 1
pdb|2BK0|B Chain B, Crystal Structure Of The Major Celery Allergen Api G 1
Length = 154
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 1 MGVVTYESEETYAVPPARMFNALA--SDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIV 58
MGV T+ E T +V ++F D + K P K+VE+ +G+GGPG++K T+
Sbjct: 1 MGVQTHVLELTSSVSAEKIFQGFVIDVDTVLPKAAPGAYKSVEI-KGDGGPGTLKIITLP 59
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
+GG + +I+ +K L YSVI+G+ L + +E I + +GGSICKT
Sbjct: 60 DGGPITTMTLRIDGVNKEALTFDYSVIDGDILLGF-IESIENHVVLVPTADGGSICKTTA 118
Query: 119 KLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQAN 154
H KG+ V EE K E+ + K +EAYL AN
Sbjct: 119 IFHTKGDAVVPEENIKYANEQNTALFKALEAYLIAN 154
>pdb|2WQL|A Chain A, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|B Chain B, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|C Chain C, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|D Chain D, Crystal Structure Of The Major Carrot Allergen Dau C 1
Length = 154
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 1 MGVVTYESEETYAVPPARMFNA--LASDNLPSKIFPDVVKNVEVLEGNGGPGSIKKFTIV 58
MG ++ E T +V ++F+ L D + K K+VEV +G+GG G+++ T+
Sbjct: 1 MGAQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGGAGTVRIITLP 59
Query: 59 EGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDLADYKLEKISFEHQWRASPNGGSICKTIC 118
EG + + + +K L +VI+G+ L + +E I + +GGSI KT
Sbjct: 60 EGSPITTMTVRTDAVNKEALSYDSTVIDGDILLGF-IESIETHMVVVPTADGGSITKTTA 118
Query: 119 KLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQAN 154
H KG+ V EE K + + K +EAYL AN
Sbjct: 119 IFHTKGDAVVPEENIKFADAQNTALFKAIEAYLIAN 154
>pdb|3US7|A Chain A, Crystal Structure Of Phytohormone Binding Protein From
Medicago Truncatula In Complex With Gibberellic Acid
(Ga3)
Length = 156
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 31 KIFPDVVKNVEVLEGNGGPGSIKKFTIVEG-GQVKYAKHKIEEEDKVNLKLKYSVIEGND 89
K+ P++VK+V+V+EG+GG G+ F + G V Y + I E D+++ + V+EG
Sbjct: 32 KVLPNIVKDVQVIEGDGGVGTKLIFNFLPGIAPVNYQREVITEYDELSHTIGLQVVEGGY 91
Query: 90 LADYKLEKISFEHQWRASPNGGSICKTICKLHAKGEVEVTEEQAKAGK--ERVLGVVKGV 147
L + L Q+ A ++ K+ E E+ EE+ K K E L + +
Sbjct: 92 L-NQGLSYYKTTFQFSAISENKTLVN--VKISYDHESELIEEKVKPTKTSESTLFYLGQL 148
Query: 148 EAYL 151
E +L
Sbjct: 149 EKFL 152
>pdb|2FLH|A Chain A, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|B Chain B, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|C Chain C, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|D Chain D, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|3C0V|A Chain A, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
pdb|3C0V|B Chain B, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
pdb|3C0V|C Chain C, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
pdb|3C0V|D Chain D, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
Length = 155
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 KIFPDVVKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEGNDL 90
K+ P +VK+V+++EG+GG G+I F + Y + +I E D+ + ++ VIEG L
Sbjct: 32 KVLPHIVKDVQLIEGDGGVGTILIFNFLPEVSPSYQREEITEFDESSHEIGLQVIEGGYL 91
Query: 91 A 91
+
Sbjct: 92 S 92
>pdb|2I9Y|A Chain A, Solution Structure Of Arabidopsis Thaliana Protein
At1g70830, A Member Of The Major Latex Protein Family
Length = 166
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 30 SKIFPDVVKNVEVLEGNGGP-GSIKKFTIVEGGQVKYAKHKIE--EEDKVNLKLKYSVIE 86
SK P ++ ++ EG+ G GSI + V G+ K AK +IE E DK NL + + VIE
Sbjct: 44 SKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDK-NL-ITFRVIE 101
Query: 87 GNDLADYK 94
G+ + +YK
Sbjct: 102 GDLMKEYK 109
>pdb|3KAZ|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|C Chain C, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KB0|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2
pdb|3KB3|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 176
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 VKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEG-NDLADYK 94
VK ++ G+G GS+++ T++ G + ++E D + L + V+ G + L +YK
Sbjct: 55 VKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYK 113
>pdb|3UJL|A Chain A, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 177
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 VKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEG-NDLADYK 94
VK ++ G+G GS+++ T++ G + ++E D + L + V+ G + L +YK
Sbjct: 56 VKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYK 114
>pdb|3NJ0|A Chain A, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|B Chain B, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|C Chain C, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
Length = 193
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 VKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEG-NDLADYK 94
VK ++ G+G GS+++ T++ G + ++E D + L + V+ G + L +YK
Sbjct: 70 VKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYK 128
>pdb|3KDH|A Chain A, Structure Of Ligand-Free Pyl2
pdb|3KDH|B Chain B, Structure Of Ligand-Free Pyl2
pdb|3KDH|C Chain C, Structure Of Ligand-Free Pyl2
pdb|3KDI|A Chain A, Structure Of (+)-Aba Bound Pyl2
pdb|3NR4|A Chain A, Pyrabactin-Bound Pyl2
pdb|3NR4|B Chain B, Pyrabactin-Bound Pyl2
pdb|3NR4|C Chain C, Pyrabactin-Bound Pyl2
pdb|3NS2|A Chain A, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|B Chain B, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|C Chain C, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3KL1|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
pdb|3KL1|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
Length = 190
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 VKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEG-NDLADYK 94
VK ++ G+G GS+++ T++ G + ++E D + L + V+ G + L +YK
Sbjct: 67 VKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYK 125
>pdb|3NMH|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
Length = 178
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 VKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEG-NDLADYK 94
VK ++ G+G GS+++ T++ G + ++E D + L + V+ G + L +YK
Sbjct: 56 VKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYK 114
>pdb|3NMP|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMT|A Chain A, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
pdb|3NMV|A Chain A, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
Length = 178
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 VKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEG-NDLADYK 94
VK ++ G+G GS+++ T++ G + ++E D + L + V+ G + L +YK
Sbjct: 56 VKRCRLISGDGDVGSVREVTVISGLPFSTSTERLEFVDDDHRVLSFRVVGGEHRLKNYK 114
>pdb|3NJ1|A Chain A, X-Ray Crystal Structure Of The Pyl2(V114i)-Pyrabactin A
Complex
Length = 193
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 VKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIEEEDKVNLKLKYSVIEG-NDLADYK 94
VK ++ G+G GS+++ T++ G + ++E D + L + ++ G + L +YK
Sbjct: 70 VKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRIVGGEHRLKNYK 128
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 15 PPARMFNALASDNL---PSKIFPDVVKNVEVLEGNGGPGSIKKFTIVEGGQVKYAKHKIE 71
PP R L D+L P ++F DV++ + G G GS+ K E GQ+ K
Sbjct: 10 PPRRQLKKLDEDSLTKQPEEVF-DVLEKL----GEGSYGSVYKAIHKETGQIVAIKQVPV 64
Query: 72 EEDKVNLKLKYSVIEGND 89
E D + + S+++ D
Sbjct: 65 ESDLQEIIKEISIMQQCD 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,278,150
Number of Sequences: 62578
Number of extensions: 222214
Number of successful extensions: 440
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 368
Number of HSP's gapped (non-prelim): 41
length of query: 159
length of database: 14,973,337
effective HSP length: 91
effective length of query: 68
effective length of database: 9,278,739
effective search space: 630954252
effective search space used: 630954252
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.7 bits)