BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031436
(159 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 89.7 bits (221), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
LIG C E +L+++Y+E G L +Y P ++ RL+I + A G+ YLH
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLH-- 156
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYIAT 121
+R I+ R+VK NIL E V K+ DF S+ E G+T + V GT GY+ PEY
Sbjct: 157 -TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 122 GDCNEKCDVYSF 133
G EK DVYSF
Sbjct: 216 GRLTEKSDVYSF 227
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
LIG C E +L+++Y+E G L +Y P ++ RL+I + A G+ YLH
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLH-- 156
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYIAT 121
+R I+ R+VK NIL E V K+ DF S+ E +T + V GT GY+ PEY
Sbjct: 157 -TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK 215
Query: 122 GDCNEKCDVYSF 133
G EK DVYSF
Sbjct: 216 GRLTEKSDVYSF 227
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G C+ +LV+ Y+ G++A R + P+ R +IA+ A G+AYLH
Sbjct: 98 LRLRGFCMTPTERLLVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
I+ R+VK +NIL E+ A + DF ++ + + + V GT G++ PEY++
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLS 216
Query: 121 TGDCNEKCDVYSF 133
TG +EK DV+ +
Sbjct: 217 TGKSSEKTDVFGY 229
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G C+ +LV+ Y+ G++A R + P+ R +IA+ A G+AYLH
Sbjct: 90 LRLRGFCMTPTERLLVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
I+ R+VK +NIL E+ A + DF ++ + + + V G G++ PEY++
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLS 208
Query: 121 TGDCNEKCDVYSF 133
TG +EK DV+ +
Sbjct: 209 TGKSSEKTDVFGY 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L+G + ++ LV+ Y+ G+L DR+ P++ +R KIA A GI +LH
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
+ R++K +NIL E AK+ DF + + + +T + R++GT Y+ PE +
Sbjct: 151 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 120 ATGDCNEKCDVYSF 133
G+ K D+YSF
Sbjct: 208 -RGEITPKSDIYSF 220
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L+G + ++ LV+ Y+ G+L DR+ P++ +R KIA A GI +LH
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
+ R++K +NIL E AK+ DF + + + +T + R++GT Y+ PE +
Sbjct: 151 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 120 ATGDCNEKCDVYSF 133
G+ K D+YSF
Sbjct: 208 -RGEITPKSDIYSF 220
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L+G + ++ LV+ Y+ G+L DR+ P++ +R KIA A GI +LH
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
+ R++K +NIL E AK+ DF + + + + + R++GT Y+ PE +
Sbjct: 145 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 120 ATGDCNEKCDVYSF 133
G+ K D+YSF
Sbjct: 202 -RGEITPKSDIYSF 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV EY+E TL++ I + P++ + +I GI + H IV R++KP
Sbjct: 88 LVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKP 139
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC-DVYSF 133
NIL K+FDF ++++ E V+GT Y PE A G+ ++C D+YS
Sbjct: 140 QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ-AKGEATDECTDIYSI 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+ E+ + GTL I R + V L L++ +I G+ Y+H S+ ++ R++KP
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKV---LALELFEQITKGVDYIH---SKKLIHRDLKP 164
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
SNI + K+ DF S+ R R + GT Y+ PE I++ D ++ D+Y+
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK--GTLRYMSPEQISSQDYGKEVDLYAL 221
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
++L G CL NPV LV EY E G+L + + H +P T + + ++ + G+AYL
Sbjct: 65 VKLYGACL---NPVCLVMEYAEGGSLYN-VLHGAEP-LPYYTAAHAMSWCLQCSQGVAYL 119
Query: 60 HVAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
H + ++ R++KP N+L +V K+ DF + I T + G+ ++ PE
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEV 175
Query: 119 IATGDCNEKCDVYSF 133
+ +EKCDV+S+
Sbjct: 176 FEGSNYSEKCDVFSW 190
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
++L G CL NPV LV EY E G+L + + H +P T + + ++ + G+AYL
Sbjct: 64 VKLYGACL---NPVCLVMEYAEGGSLYN-VLHGAEP-LPYYTAAHAMSWCLQCSQGVAYL 118
Query: 60 HVAFSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY 118
H + ++ R++KP N+L +V K+ DF + I T + G+ ++ PE
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEV 174
Query: 119 IATGDCNEKCDVYSF 133
+ +EKCDV+S+
Sbjct: 175 FEGSNYSEKCDVFSW 189
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+ E+ + GTL I R + V L L++ +I G+ Y+H S+ ++ R++KP
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKV---LALELFEQITKGVDYIH---SKKLINRDLKP 150
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
SNI + K+ DF S+ R R + GT Y+ PE I++ D ++ D+Y+
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK--GTLRYMSPEQISSQDYGKEVDLYAL 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 4 IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+G + N +V EY+ G+L R+ H + E + RL +A ++A G+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLY-RLLH-KSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-VMGTFGYLPPEYIATG 122
+ PIV RN+K N+L ++ K+ DF S + T + + GT ++ PE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 123 DCNEKCDVYSF 133
NEK DVYSF
Sbjct: 215 PSNEKSDVYSF 225
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L+G + ++ LV+ Y G+L DR+ P++ R KIA A GI +LH
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE-GETRIRGRVMGTFGYLPPEYI 119
+ R++K +NIL E AK+ DF + + + + R++GT Y PE +
Sbjct: 142 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 120 ATGDCNEKCDVYSF 133
G+ K D+YSF
Sbjct: 199 -RGEITPKSDIYSF 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 9 ETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
ET++ + LV + G L IYH Q F A EI G+ LH I
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF---YAAEICCGLEDLH---RERI 307
Query: 68 VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
V+R++KP NIL + ++ D + +PEG+T I+GRV GT GY+ PE +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKN 359
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 4 IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+G + N +V EY+ G+L R+ H + E + RL +A ++A G+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLY-RLLH-KSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
+ PIV R++K N+L ++ K+ DF S + GT ++ PE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 124 CNEKCDVYSF 133
NEK DVYSF
Sbjct: 216 SNEKSDVYSF 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV + G L IYH Q F A EI G+ LH IV+R++KP
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVF---YAAEICCGLEDLH---RERIVYRDLKP 314
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
NIL + ++ D + +PEG+T I+GRV GT GY+ PE +
Sbjct: 315 ENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKN 359
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHP-RQPNFEPVTCSLRLKIAMEIAYGIAYL 59
+R+ G + + ++ +Y+E G L + R PN PV A E+ + YL
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN--PVAKFY----AAEVCLALEYL 122
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
H S+ I++R++KP NIL + K+ DF +++ +P+ + + GT Y+ PE +
Sbjct: 123 H---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVV 175
Query: 120 ATGDCNEKCDVYSF 133
+T N+ D +SF
Sbjct: 176 STKPYNKSIDWWSF 189
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G ++ L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
P +V EYV+ TL D I H P + K A+E IA L+ + I+ R+
Sbjct: 91 PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIR--GRVMGTFGYLPPEYIATGDCNEKCD 129
VKP+NIL + K+ DF + +I + + V+GT YL PE + + D
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
VYS
Sbjct: 202 VYSL 205
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
P +V EYV+ TL D I H P + K A+E IA L+ + I+ R+
Sbjct: 91 PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
VKP+NI+ + K+ DF + +I + + V+GT YL PE + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
VYS
Sbjct: 202 VYSL 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
P +V EYV+ TL D I H P + K A+E IA L+ + I+ R+
Sbjct: 91 PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
VKP+NI+ + K+ DF + +I + + V+GT YL PE + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
VYS
Sbjct: 202 VYSL 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLAD--RIYHPR-------QPNFEPVTCSLRLKIAME 51
++ G C+E + ++VFEY+++G L R + P P E +T S L IA +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQMLHIAQQ 136
Query: 52 IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGT 110
IA G+ YL S+ V R++ N L E + K+ DF S + + R+ G M
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
++PPE I + DV+S
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSL 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
P +V EYV+ TL D I H P + K A+E IA L+ + I+ R+
Sbjct: 108 PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 158
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
VKP+NI+ + K+ DF + +I + + V+GT YL PE + + D
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 130 VYSF 133
VYS
Sbjct: 219 VYSL 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+R G C E ++VFEY+ +G L +R P+ + P+ L +A
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVM 108
++A G+ YL V R++ N L + V K+ DF S I + R+ GR M
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
++PPE I + DV+SF
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSF 246
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
P +V EYV+ TL D I H P + K A+E IA L+ + I+ R+
Sbjct: 91 PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
VKP+NI+ + K+ DF + +I + + V+GT YL PE + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
VYS
Sbjct: 202 VYSL 205
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAME-IAYGIAYLHVAFSRPIVFRN 71
P +V EYV+ TL D I H P + K A+E IA L+ + I+ R+
Sbjct: 91 PYIVMEYVDGVTLRD-IVHTEGP--------MTPKRAIEVIADACQALNFSHQNGIIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRI--RGRVMGTFGYLPPEYIATGDCNEKCD 129
VKP+NI+ + K+ DF + +I + + V+GT YL PE + + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 130 VYSF 133
VYS
Sbjct: 202 VYSL 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 74 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 127
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
RN++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 129 DVYSF 133
DV+SF
Sbjct: 188 DVWSF 192
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+R G C E ++VFEY+ +G L +R P+ + P+ L +A
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVM 108
++A G+ YL V R++ N L + V K+ DF S I + R+ GR M
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
++PPE I + DV+SF
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSF 217
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+R G C E ++VFEY+ +G L +R P+ + P+ L +A
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVM 108
++A G+ YL V R++ N L + V K+ DF S I + R+ GR M
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
++PPE I + DV+SF
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSF 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYI---TELANALSYCH 129
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPEMIE 183
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 184 GRMHDEKVDLWSL 196
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 183 GRMHDEKVDLWSL 195
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 5 GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
GCC + ++ LV EYV G+L D Y PR + + L A +I G+AYLH
Sbjct: 83 GCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHS----IGLAQLLLFAQQICEGMAYLH-- 134
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPPEYI 119
S+ + RN+ N+L + K+ DF ++++PEG R R G F Y PE +
Sbjct: 135 -SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 120 ATGDCNEKCDVYSF 133
DV+SF
Sbjct: 193 KEYKFYYASDVWSF 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEXIE 184
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 185 GRXHDEKVDLWSL 197
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYI---TELANALSYCH 129
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 183
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 184 GRMHDEKVDLWSL 196
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
DV+SF
Sbjct: 192 DVWSF 196
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
DV+SF
Sbjct: 192 DVWSF 196
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 80 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 133
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 129 DVYSF 133
DV+SF
Sbjct: 194 DVWSF 198
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 79 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 132
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 129 DVYSF 133
DV+SF
Sbjct: 193 DVWSF 197
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 72 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPEMIE 180
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 181 GRMHDEKVDLWSL 193
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 183 GRMHDEKVDLWSL 195
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 183 GRMHDEKVDLWSL 195
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 183 GRMHDEKVDLWSL 195
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
M+L + N LV E + G L D I H + F V ++ +K ++ G+ YLH
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIH--RMKFNEVDAAVIIK---QVLSGVTYLH 153
Query: 61 VAFSRPIVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
IV R++KP N+L + + ++ K+ DF S ++ E + +++ R +GT Y+ PE
Sbjct: 154 ---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKKMKER-LGTAYYIAPE 208
Query: 118 YIATGDCNEKCDVYS 132
+ +EKCDV+S
Sbjct: 209 -VLRKKYDEKCDVWS 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 70 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 124
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 125 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 178
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 179 GRMHDEKVDLWSL 191
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 73 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 127
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIE 181
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 182 GRMHDEKVDLWSL 194
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
DV+SF
Sbjct: 192 DVWSF 196
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 68 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 122
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 123 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 176
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 177 GRMHDEKVDLWSL 189
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 86 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 139
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 129 DVYSF 133
DV+SF
Sbjct: 200 DVWSF 204
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 87 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 140
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 129 DVYSF 133
DV+SF
Sbjct: 201 DVWSF 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 184
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 185 GRMHDEKVDLWSL 197
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 129
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 130 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 183
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 184 GRMHDEKVDLWSL 196
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L G CL+ N LV E+ G L + R P + + A++IA G+ YLH
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP------DILVNWAVQIARGMNYLH 122
Query: 61 VAFSRPIVFRNVKPSNILFQEQ--------SVAKLFDFSYSESIPEGETRIRGRVMGTFG 112
PI+ R++K SNIL ++ + K+ DF + E + G +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYA 179
Query: 113 YLPPEYIATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
++ PE I ++ DV+S+ G LTG +R D
Sbjct: 180 WMAPEVIRASMFSKGSDVWSY-GVLLWELLTGEVPFRGID 218
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 183 GRMHDEKVDLWSL 195
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 84 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 129 DVYSF 133
DV+SF
Sbjct: 198 DVWSF 202
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 184
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 185 GRMHDEKVDLWSL 197
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 72 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 180
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 181 GRMHDEKVDLWSL 193
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 179
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 180 GRMHDEKVDLWSL 192
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 5 GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
GCC + ++ LV EYV G+L D Y PR + + L A +I G+AYLH
Sbjct: 83 GCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHS----IGLAQLLLFAQQICEGMAYLH-- 134
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPPEYI 119
++ + RN+ N+L + K+ DF ++++PEG R R G F Y PE +
Sbjct: 135 -AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 120 ATGDCNEKCDVYSF 133
DV+SF
Sbjct: 193 KEYKFYYASDVWSF 206
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 72 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPPEMIE 180
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 181 GRMHDEKVDLWSL 193
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 78 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 129 DVYSF 133
DV+SF
Sbjct: 192 DVWSF 196
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 84 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 129 DVYSF 133
DV+SF
Sbjct: 198 DVWSF 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 88 LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 142
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 143 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 196
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 197 GRMHDEKVDLWSL 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 83 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 136
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 129 DVYSF 133
DV+SF
Sbjct: 197 DVWSF 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 73 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 126
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 129 DVYSF 133
DV+SF
Sbjct: 187 DVWSF 191
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 97 LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 151
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIE 205
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 206 GRMHDEKVDLWSL 218
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
T+ P+ ++ EY+E G+L D + + P+ +T + L +A +IA G+A++ R +
Sbjct: 88 TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 141
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE I G K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 129 DVYSF 133
DV+SF
Sbjct: 202 DVWSF 206
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIY------------HPRQPNFEPVTCSLRLKI 48
++ G C + + ++VFEY+++G L + PRQ E + S L I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQMLHI 138
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRV 107
A +IA G+ YL S+ V R++ N L + K+ DF S + + R+ G
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
M ++PPE I + DV+SF
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSF 221
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 97 LRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYI---TELANALSYCH 151
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ DF +S P R + GT YLPPE I
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 205
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 206 GRMHDEKVDLWSL 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E+ E G L ++I + + F+ + I +I GI YLH IV R++KP
Sbjct: 123 LVTEFYEGGELFEQIINRHK--FDECDAA---NIMKQILSGICYLH---KHNIVHRDIKP 174
Query: 75 SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
NIL + ++ K+ DF S S + ++R R +GT Y+ PE + NEKCDV+
Sbjct: 175 ENILLENKNSLLNIKIVDFGLS-SFFSKDYKLRDR-LGTAYYIAPE-VLKKKYNEKCDVW 231
Query: 132 S--------------FDGSRDSGHL----TGRAWYRSEDWK 154
S F G D + G+ ++ DWK
Sbjct: 232 SCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLAD--RIYHPR-----------------QPNFEPVT 41
++L+G C + L+FEY+ YG L + R P P P++
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 42 CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE- 100
C+ +L IA ++A G+AYL R V R++ N L E V K+ DF S +I +
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 101 TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ G ++PPE I + DV+++
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 262
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
E+A ++Y H S+ ++ R++KP N+L K+ DF +S P R + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGT 174
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
YLPPE I +EK D++S
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSL 197
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
G L+ ++ EY+ G+ D + R F+ + LK EI G+ YLH S
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLK---EILKGLDYLH---S 138
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
+ R++K +N+L EQ KL DF + + + + + R +GT ++ PE I
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIQQSAY 197
Query: 125 NEKCDVYSF 133
+ K D++S
Sbjct: 198 DSKADIWSL 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
E+A ++Y H S+ ++ R++KP N+L K+ DF +S P R + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 174
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
YLPPE I +EK D++S
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSL 197
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 5 GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
GCC + + LV EYV G+L D Y PR + + L A +I G+AYLH
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRD--YLPRHS----IGLAQLLLFAQQICEGMAYLH-- 151
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG---TFGYLPPEYI 119
++ + R++ N+L + K+ DF ++++PEG R R G F Y PE +
Sbjct: 152 -AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECL 209
Query: 120 ATGDCNEKCDVYSF 133
DV+SF
Sbjct: 210 KEYKFYYASDVWSF 223
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 5 GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
GCC + ++ LV EYV G+L D Y PR V + L A +I G+AYLH
Sbjct: 77 GCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHC----VGLAQLLLFAQQICEGMAYLH-- 128
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
++ + R + N+L + K+ DF ++++PEG R R G P +
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVFWYAP 183
Query: 123 DCNEKC------DVYSF 133
+C ++C DV+SF
Sbjct: 184 ECLKECKFYYASDVWSF 200
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 5 GCCLET--ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
GCC + ++ LV EYV G+L D Y PR V + L A +I G+AYLH
Sbjct: 78 GCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHC----VGLAQLLLFAQQICEGMAYLH-- 129
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATG 122
++ + R + N+L + K+ DF ++++PEG R R G P +
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD----SPVFWYAP 184
Query: 123 DCNEKC------DVYSF 133
+C ++C DV+SF
Sbjct: 185 ECLKECKFYYASDVWSF 201
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ +F +S P R + GT YLPPE I
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 182
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 183 GRMHDEKVDLWSL 195
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + L+ EY GT+ + + F+ + + E+A ++Y H
Sbjct: 73 LRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI---TELANALSYCH 127
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ ++ R++KP N+L K+ +F +S P R + GT YLPPE I
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 181
Query: 121 TGDCNEKCDVYSF 133
+EK D++S
Sbjct: 182 GRMHDEKVDLWSL 194
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
R G L++ ++ EY+ G+ D + +P P+ + I EI G+ YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL----KPG--PLEETYIATILREILKGLDYLH- 133
Query: 62 AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
S + R++K +N+L EQ KL DF + + + + + R +GT ++ PE I
Sbjct: 134 --SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQ 190
Query: 122 GDCNEKCDVYSF 133
+ K D++S
Sbjct: 191 SAYDFKADIWSL 202
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPE 117
LH R ++ R++KP N+L + K+ DF +S P +R R M GT YLPPE
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 182
Query: 118 YIATGDCNEKCDVY 131
I +EK D++
Sbjct: 183 MIEGKTHDEKVDLW 196
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPE 117
LH R ++ R++KP N+L + K+ DF +S P +R R M GT YLPPE
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 183
Query: 118 YIATGDCNEKCDVY 131
I +EK D++
Sbjct: 184 MIEGKTHDEKVDLW 197
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYLPPE 117
LH R ++ R++KP N+L + K+ DF +S P +R R M GT YLPPE
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 182
Query: 118 YIATGDCNEKCDVY 131
I +EK D++
Sbjct: 183 MIEGKTHDEKVDLW 196
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 186 INYYKFSSKSDVWSF 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L G CLE LVFE++E+G L+D + R L + +++ G+AYL
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 120
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
A ++ R++ N L E V K+ DF + + + + + PE +
Sbjct: 121 EA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 121 TGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 178 FSRYSSKSDVWSF 190
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 124
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 182 INYYKFSSKSDVWSF 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 122
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 123 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 180 INYYKFSSKSDVWSF 194
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 134
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 192 INYYKFSSKSDVWSF 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 186 INYYKFSSKSDVWSF 200
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L+ C + + LVFE+V++ L D P +++ V K +I GI + H
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-----KYLFQIINGIGFCH 141
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
S I+ R++KP NIL + V KL DF ++ ++
Sbjct: 142 ---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 142
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 143 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 200 INYYKFSSKSDVWSF 214
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L G CLE LVFE++E+G L+D + R L + +++ G+AYL
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 123
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
A ++ R++ N L E V K+ DF + + + + + PE +
Sbjct: 124 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 121 TGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 181 FSRYSSKSDVWSF 193
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 202 INYYKFSSKSDVWSF 216
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 202 INYYKFSSKSDVWSF 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L G CLE LVFE++E+G L+D + R L + +++ G+AYL
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 118
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
A ++ R++ N L E V K+ DF + + + + + PE +
Sbjct: 119 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 121 TGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 176 FSRYSSKSDVWSF 188
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L G CLE LVFE++E+G L+D + R L + +++ G+AYL
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 120
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
A ++ R++ N L E V K+ DF + + + + + PE +
Sbjct: 121 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 121 TGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 178 FSRYSSKSDVWSF 190
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L G CLE LVFE++E+G L+D + R L + +++ G+AYL
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 140
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
A ++ R++ N L E V K+ DF + + + + + PE +
Sbjct: 141 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 121 TGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 198 FSRYSSKSDVWSF 210
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V R++ N + K+ DF + I E + R G+ + ++
Sbjct: 140 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 197 APESLKDGVFTTSSDMWSF 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ EY+ G L ++ R+ F T L EI+ + +LH + I++R++KP
Sbjct: 98 LILEYLSGGELFMQL--EREGIFMEDTACFYL---AEISMALGHLH---QKGIIYRDLKP 149
Query: 75 SNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
NI+ Q KL DF ESI +G + GT Y+ PE + N D +S
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPEILMRSGHNRAVDWWSL 207
Query: 134 DGSRDSGHLTGRAWYRSEDWKPAV 157
G+ LTG + E+ K +
Sbjct: 208 -GALMYDMLTGAPPFTGENRKKTI 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ EY+ G L ++ R+ F T L EI+ + +LH + I++R++KP
Sbjct: 98 LILEYLSGGELFMQL--EREGIFMEDTACFYL---AEISMALGHLH---QKGIIYRDLKP 149
Query: 75 SNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
NI+ Q KL DF ESI +G + GT Y+ PE + N D +S
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSL 207
Query: 134 DGSRDSGHLTGRAWYRSEDWKPAV 157
G+ LTG + E+ K +
Sbjct: 208 -GALMYDMLTGAPPFTGENRKKTI 230
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V R++ N + K+ DF + I E + R G+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V R++ N + K+ DF + I E + R G+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V RN+ N + K+ DF + I E + R G+ + ++
Sbjct: 144 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 201 APESLKDGVFTTSSDMWSF 219
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 487
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
+ V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 545 INYYKFSSKSDVWSF 559
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
+ E+ +V E +E G L D++ ++ + TC L ++ + YLH I+
Sbjct: 85 DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 136
Query: 69 FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
R++KP N+L +E + K+ DF +S+ + GET + + GT YL PE + T
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 123 DCNEKCDVYSF 133
N D +S
Sbjct: 195 GYNRAVDCWSL 205
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V RN+ N + K+ DF + I E + R G+ + ++
Sbjct: 143 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
+ E+ +V E +E G L D++ ++ + TC L ++ + YLH I
Sbjct: 223 FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGI 274
Query: 68 VFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IAT 121
+ R++KP N+L +E + K+ DF +S+ + GET + + GT YL PE + T
Sbjct: 275 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGT 332
Query: 122 GDCNEKCDVYSF 133
N D +S
Sbjct: 333 AGYNRAVDCWSL 344
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
+ E+ +V E +E G L D++ ++ + TC L ++ + YLH I+
Sbjct: 85 DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 136
Query: 69 FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
R++KP N+L +E + K+ DF +S+ + GET + + GT YL PE + T
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 123 DCNEKCDVYSF 133
N D +S
Sbjct: 195 GYNRAVDCWSL 205
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
+ E+ +V E +E G L D++ ++ + TC L ++ + YLH I+
Sbjct: 91 DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 142
Query: 69 FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
R++KP N+L +E + K+ DF +S+ + GET + + GT YL PE + T
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 123 DCNEKCDVYSF 133
N D +S
Sbjct: 201 GYNRAVDCWSL 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+R+IG C E E+ +LV E E G L + R + + +++ +++ G+ YL
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 486
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
+ V R++ N+L Q AK+ DF S+++ E + + G + + PE
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 119 IATGDCNEKCDVYSF 133
I + K DV+SF
Sbjct: 544 INYYKFSSKSDVWSF 558
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
+ E+ +V E +E G L D++ ++ + TC L ++ + YLH I+
Sbjct: 84 DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 135
Query: 69 FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
R++KP N+L +E + K+ DF +S+ + GET + + GT YL PE + T
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 123 DCNEKCDVYSF 133
N D +S
Sbjct: 194 GYNRAVDCWSL 204
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
+ E+ +V E +E G L D++ ++ + TC L ++ + YLH I+
Sbjct: 85 DAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGII 136
Query: 69 FRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IATG 122
R++KP N+L +E + K+ DF +S+ + GET + + GT YL PE + T
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 123 DCNEKCDVYSF 133
N D +S
Sbjct: 195 GYNRAVDCWSL 205
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
+ E+ +V E +E G L D++ ++ + TC L ++ + YLH I
Sbjct: 209 FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYF---YQMLLAVQYLH---ENGI 260
Query: 68 VFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEY---IAT 121
+ R++KP N+L +E + K+ DF +S+ + GET + + GT YL PE + T
Sbjct: 261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGT 318
Query: 122 GDCNEKCDVYSF 133
N D +S
Sbjct: 319 AGYNRAVDCWSL 330
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 202 SPESLKDGVFTTYSDVWSF 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV---AKLFDFSYSESIPEGETRI 103
+I ++ GI Y+H IV R++KP NIL + + K+ DF S + T++
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKM 180
Query: 104 RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
+ R+ GT Y+ PE + G +EKCDV+S
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWS 207
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 136 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 193 SPESLKDGVFTTYSDVWSF 211
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C +V EY+ YG L D + R+ N E VT + L +A +I+ + YL
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E V K+ DF S + + PE +A
Sbjct: 148 ---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 204
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 205 YNTFSIKSDVWAF 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
G L+ ++ EY+ G+ D + +P P+ + I EI G+ YLH S
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 122
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
+ R++K +N+L E KL DF + + + + + R +GT ++ PE I
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAY 181
Query: 125 NEKCDVYSF 133
+ K D++S
Sbjct: 182 DSKADIWSL 190
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
G L+ ++ EY+ G+ D + +P P+ + I EI G+ YLH S
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 122
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
+ R++K +N+L E KL DF + + + + + R +GT ++ PE I
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAY 181
Query: 125 NEKCDVYSF 133
+ K D++S
Sbjct: 182 DSKADIWSL 190
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV---AKLFDFSYSESIPEGETRI 103
+I ++ GI Y+H IV R++KP NIL + + K+ DF S + T++
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 104 RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
+ R+ GT Y+ PE + G +EKCDV+S
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWS 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
G L+ ++ EY+ G+ D + +P P+ + I EI G+ YLH S
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 137
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
+ R++K +N+L E KL DF + + + + + R +GT ++ PE I
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAY 196
Query: 125 NEKCDVYSF 133
+ K D++S
Sbjct: 197 DSKADIWSL 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV---AKLFDFSYSESIPEGETRI 103
+I ++ GI Y+H IV R++KP NIL + + K+ DF S + T++
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 104 RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
+ R+ GT Y+ PE + G +EKCDV+S
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWS 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
M+L + N LV E G L D I RQ F V ++ +K ++ G YLH
Sbjct: 67 MKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQK-FSEVDAAVIMK---QVLSGTTYLH 121
Query: 61 VAFSRPIVFRNVKPSNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
IV R++KP N+L + +S + K+ DF S G +++ R +GT Y+ PE
Sbjct: 122 ---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKER-LGTAYYIAPE 176
Query: 118 YIATGDCNEKCDVYS 132
+ +EKCDV+S
Sbjct: 177 -VLRKKYDEKCDVWS 190
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N +V E E G L +RI Q + ++ ++ ++ +AY H S+ +V ++
Sbjct: 94 NMYIVMETCEGGELLERIVSA-QARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKD 149
Query: 72 VKPSNILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
+KP NILFQ+ S K+ DF +E E GT Y+ PE + D KC
Sbjct: 150 LKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA--AGTALYMAPE-VFKRDVTFKC 206
Query: 129 DVYS 132
D++S
Sbjct: 207 DIWS 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
+TE + L+ +++ G L R+ E V L E+A G+ +LH S
Sbjct: 98 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALGLDHLH---SL 149
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
I++R++KP NIL E+ KL DF S+ + E + GT Y+ PE + +
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNRQGHS 208
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
D +S+ G LTG ++ +D K +
Sbjct: 209 HSADWWSY-GVLMFEMLTGSLPFQGKDRKETM 239
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
G L+ ++ EY+ G+ D + +P P+ + I EI G+ YLH S
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLL----EPG--PLDETQIATILREILKGLDYLH---S 142
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
+ R++K +N+L E KL DF + + + + + R +GT ++ PE I
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAY 201
Query: 125 NEKCDVYSF 133
+ K D++S
Sbjct: 202 DSKADIWSL 210
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E G L D I ++ F V + +I ++ GI Y+H IV R++KP
Sbjct: 126 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 177
Query: 75 SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L + +S ++ DF S E +++ ++ GT Y+ PE + G +EKCDV+
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 234
Query: 132 S 132
S
Sbjct: 235 S 235
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++ IG + + + EY++ GTL I + S R+ A +IA G+AYLH
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGII----KSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS------ESIPEG-------ETRIRGRV 107
S I+ R++ N L +E + DF + ++ PEG + + R V
Sbjct: 126 ---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
+G ++ PE I +EK DV+SF
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSF 208
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E G L D I ++ F V + +I ++ GI Y+H IV R++KP
Sbjct: 103 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 154
Query: 75 SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L + +S ++ DF S E +++ ++ GT Y+ PE + G +EKCDV+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 211
Query: 132 S 132
S
Sbjct: 212 S 212
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E G L D I ++ F V + +I ++ GI Y+H IV R++KP
Sbjct: 127 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 178
Query: 75 SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L + +S ++ DF S E +++ ++ GT Y+ PE + G +EKCDV+
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 235
Query: 132 S 132
S
Sbjct: 236 S 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
M+L + N LV E G L D I + F V ++ +K ++ G YLH
Sbjct: 84 MKLYEFFEDKRNYYLVMEVYRGGELFDEII--LRQKFSEVDAAVIMK---QVLSGTTYLH 138
Query: 61 VAFSRPIVFRNVKPSNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
IV R++KP N+L + +S + K+ DF S G +++ R +GT Y+ PE
Sbjct: 139 ---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKER-LGTAYYIAPE 193
Query: 118 YIATGDCNEKCDVYS 132
+ +EKCDV+S
Sbjct: 194 -VLRKKYDEKCDVWS 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E G L D I ++ F V + +I ++ GI Y+H IV R++KP
Sbjct: 109 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKP 160
Query: 75 SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L + +S ++ DF S E +++ ++ GT Y+ PE + G +EKCDV+
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVW 217
Query: 132 S 132
S
Sbjct: 218 S 218
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V R++ N + K+ DF + I E + R G+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V R++ N + K+ DF + I E + R G+ + ++
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 199 APESLKDGVFTTSSDMWSF 217
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 141 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 198 SPESLKDGVFTTYSDVWSF 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
+TE + L+ +++ G L R+ E V L E+A + +LH S
Sbjct: 95 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALALDHLH---SL 146
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
I++R++KP NIL E+ KL DF S+ + E + GT Y+ PE +
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHT 205
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
+ D +SF G LTG ++ +D K +
Sbjct: 206 QSADWWSF-GVLMFEMLTGTLPFQGKDRKETM 236
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
+TE + L+ +++ G L R+ E V L E+A + +LH S
Sbjct: 94 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALALDHLH---SL 145
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
I++R++KP NIL E+ KL DF S+ + E + GT Y+ PE +
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHT 204
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
+ D +SF G LTG ++ +D K +
Sbjct: 205 QSADWWSF-GVLMFEMLTGTLPFQGKDRKETM 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 138 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 195 SPESLKDGVFTTYSDVWSF 213
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 142 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 199 SPESLKDGVFTTYSDVWSF 217
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 6 CCLET-ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
C +T EN V EY+ G L I + + T A EI G+ +LH S
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLH---S 137
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
+ IV+R++K NIL + K+ DF + G+ + GT Y+ PE +
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPEILLGQKY 196
Query: 125 NEKCDVYSFDGSRDSGHLTGRAWYRSED 152
N D +SF G L G++ + +D
Sbjct: 197 NHSVDWWSF-GVLLYEMLIGQSPFHGQD 223
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 201
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 202 SPESLKDGVFTTYSDVWSF 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 6 CCLET-ENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
C +T EN V EY+ G L I + + T A EI G+ +LH S
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLH---S 136
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
+ IV+R++K NIL + K+ DF + G+ + GT Y+ PE +
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEILLGQKY 195
Query: 125 NEKCDVYSFDGSRDSGHLTGRAWYRSED 152
N D +SF G L G++ + +D
Sbjct: 196 NHSVDWWSF-GVLLYEMLIGQSPFHGQD 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR----LKIAMEIAYGIAYLHVAFSRPIV 68
P+L EY E G L R Y + N C L+ + +I+ + YLH I+
Sbjct: 94 PLLAMEYCEGGDL--RKYLNQFEN----CCGLKEGPIRTLLSDISSALRYLH---ENRII 144
Query: 69 FRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
R++KP NI+ Q ++ + K+ D Y++ + +GE + +GT YL PE +
Sbjct: 145 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYT 202
Query: 126 EKCDVYSF 133
D +SF
Sbjct: 203 VTVDYWSF 210
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 13 PVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR----LKIAMEIAYGIAYLHVAFSRPIV 68
P+L EY E G L R Y + N C L+ + +I+ + YLH I+
Sbjct: 93 PLLAMEYCEGGDL--RKYLNQFEN----CCGLKEGPIRTLLSDISSALRYLH---ENRII 143
Query: 69 FRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
R++KP NI+ Q ++ + K+ D Y++ + +GE + +GT YL PE +
Sbjct: 144 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYT 201
Query: 126 EKCDVYSF 133
D +SF
Sbjct: 202 VTVDYWSF 209
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 201 SPESLKDGVFTTYSDVWSF 219
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRI---------YHPRQPNFEPVTCSLRLKIAM 50
+ L+G C + P++V E+ ++G L+ + Y P + +T + +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMG 109
++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 156 QVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 201 SPESLKDGVFTTYSDVWSF 219
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 16/103 (15%)
Query: 43 SLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-- 100
S+ L I ++IA + +LH S+ ++ R++KPSNI F V K+ DF ++ + E
Sbjct: 118 SVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 101 ----------TRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
R G+V GT Y+ PE I + K D++S
Sbjct: 175 QTVLTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSL 216
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 173 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 229
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 230 SPESLKDGVFTTYSDVWSF 248
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 1 MRLIGCCLETEN-----PVLVFEYVEYGTLADRIYHPR-QPNFEPVTCSLRLKIAMEIAY 54
+RL+G C+E + P+++ +++YG L + + R + + + LK ++IA
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT-FGY 113
G+ YL +R + R++ N + ++ + DF S+ I G+ +GR+ +
Sbjct: 159 GMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 114 LPPEYIATGDCNEKCDVYSF 133
+ E +A K DV++F
Sbjct: 216 IAIESLADRVYTSKSDVWAF 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 208 SPESLKDGVFTTYSDVWSF 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
+TE + L+ +++ G L R+ E V L E+A + +LH S
Sbjct: 94 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-----AELALALDHLH---SL 145
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
I++R++KP NIL E+ KL DF S+ + E + GT Y+ PE +
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHT 204
Query: 126 EKCDVYSFDGSRDSGHLTGRAWYRSEDWKPAV 157
+ D +SF G LTG ++ +D K +
Sbjct: 205 QSADWWSF-GVLMFEMLTGTLPFQGKDRKETM 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N + E K+ DF + I E + R G+ + ++
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 208 SPESLKDGVFTTYSDVWSF 226
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + RN+ N L E + K+ DF S + + PE +A
Sbjct: 336 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 392
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 393 YNKFSIKSDVWAF 405
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L G CLE LV E++E+G L+D + R L + +++ G+AYL
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLE 121
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
A ++ R++ N L E V K+ DF + + + + + PE +
Sbjct: 122 EA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 121 TGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 179 FSRYSSKSDVWSF 191
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E+ G++ D I + + + + I EI G+++LH ++ R++K
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAY---ICREILRGLSHLH---QHKVIHRDIKG 157
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCD-VYSF 133
N+L E + KL DF S + R R +GT ++ PE IA C+E D Y F
Sbjct: 158 QNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIA---CDENPDATYDF 213
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + ++V E + +G L + R P P T +++A EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ ++ V R++ N + K+ DF + I E R G+ + ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G D++SF
Sbjct: 200 APESLKDGVFTTSSDMWSF 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP--------VTCSLRLKIAME 51
+ L+G C + P++V E+ ++G L+ + R F P +T + + +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 52 IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGT 110
+A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 153 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSF 232
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 184 YNKFSIKSDVWAF 196
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 318 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + RN+ N L E + K+ DF S + + PE +A
Sbjct: 375 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 431
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 432 YNKFSIKSDVWAF 444
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 276 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + RN+ N L E + K+ DF S + + PE +A
Sbjct: 333 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 389
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 390 YNKFSIKSDVWAF 402
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPR-----QPNFEPVTCSLRLKIAMEIAYG 55
+RL+G + + +++ E + G L + R P P + S +++A EIA G
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE-TRIRGRVMGTFGYL 114
+AYL+ + V R++ N E K+ DF + I E + R G+ + ++
Sbjct: 138 MAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+SF
Sbjct: 195 SPESLKDGVFTTYSDVWSF 213
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.1 bits (105), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E G L D I ++ F V + +I ++ GI Y H IV R++KP
Sbjct: 103 LVGEVYTGGELFDEIISRKR--FSEVDAA---RIIRQVLSGITYXH---KNKIVHRDLKP 154
Query: 75 SNILFQEQSV---AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L + +S ++ DF S E + + ++ GT Y+ PE + G +EKCDV+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHF-EASKKXKDKI-GTAYYIAPE-VLHGTYDEKCDVW 211
Query: 132 S 132
S
Sbjct: 212 S 212
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q K+ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q K+ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q K+ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 186
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 187 YNKFSIKSDVWAF 199
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q K+ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ +LH R I++R++KP N+L + ++ D + + G+T+ +G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
G++ PE + + + D ++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 46 LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-- 103
L I ++IA + +LH S+ ++ R++KPSNI F V K+ DF ++ + E
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 104 ----------RGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
G+V GT Y+ PE I + + K D++S
Sbjct: 224 LTPMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSL 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ +LH R I++R++KP N+L + ++ D + + G+T+ +G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
G++ PE + + + D ++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ +LH R I++R++KP N+L + ++ D + + G+T+ +G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
G++ PE + + + D ++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L EQ ++ DF +++ R++GR
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-------RVKGRTW 183
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWAL 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ +LH R I++R++KP N+L + ++ D + + G+T+ +G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GT 352
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
G++ PE + + + D ++
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFAL 375
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 184 YNKFSIKSDVWAF 196
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V ++ E +L + H + FE + IA + A G+ YLH ++ I+ R++K
Sbjct: 95 AIVTQWCEGSSLYHHL-HASETKFEMKKL---IDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
+NI E + K+ DF + ++R G ++ G+ ++ PE I D N
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 127 -KCDVYSF 133
+ DVY+F
Sbjct: 204 FQSDVYAF 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V ++ E +L + H + FE + IA + A G+ YLH ++ I+ R++K
Sbjct: 95 AIVTQWCEGSSLYHHL-HASETKFEMKKL---IDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
+NI E + K+ DF + ++R G ++ G+ ++ PE I D N
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 127 -KCDVYSF 133
+ DVY+F
Sbjct: 204 FQSDVYAF 211
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-- 106
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 107 -VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ GT YL PE I + N+ D ++
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR-- 106
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 107 -VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ GT YL PE I + N+ D ++
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V ++ E +L + H + FE + IA + A G+ YLH ++ I+ R++K
Sbjct: 83 AIVTQWCEGSSLYHHL-HASETKFEMKKL---IDIARQTARGMDYLH---AKSIIHRDLK 135
Query: 74 PSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KC 128
+NI E + K+ DF + +S G + ++ G+ ++ PE I D N +
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 129 DVYSF 133
DVY+F
Sbjct: 195 DVYAF 199
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
+V EY+ G+L D + TC +IA E + +LH S ++ RN
Sbjct: 95 VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRN 142
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
+K NIL KL DF + I +++ R ++GT ++ PE + K D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 132 SF 133
S
Sbjct: 202 SL 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q K+ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 15 LVFEYVEYGTLA--DRIYHPRQPNFEPVTCSLRLKIAMEIAYGI--AYLHVAFSRPIVFR 70
+++EY+E ++ D + N+ TC + +++ I + ++ ++ + I R
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR 176
Query: 71 NVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
+VKPSNIL + KL DF SE + + +I+G GT+ ++PPE+ +
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGESEYMVDK--KIKGS-RGTYEFMPPEFFSN 224
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 32/152 (21%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
+ L+G C L EY +G L D + R +P ++ L A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR--- 106
++A G+ YL + + RN+ NIL E VAK+ DF S RG+
Sbjct: 146 ADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLS----------RGQEVY 192
Query: 107 VMGTFGYLPPEYIATGDCN-----EKCDVYSF 133
V T G LP ++A N DV+S+
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 224
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q K+ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q K+ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q K+ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKI 48
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKTPEDLYKDFLTLEHLICY 153
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRV 107
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 154 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q K+ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q K+ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
I E+A + Y H + ++ R++KP N+L + K+ DF +S P +R +
Sbjct: 128 IMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKT 180
Query: 108 M-GTFGYLPPEYIATGDCNEKCDVY 131
M GT YLPPE I NEK D++
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLW 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP--------VTCSLRLKIAME 51
+ L+G C + P++V E+ ++G L+ + R F P +T + + +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 52 IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGT 110
+A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 153 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSF 232
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E + G L D+I RQ F S L I + YLH S+ +V R++KP
Sbjct: 98 LVTELMRGGELLDKIL--RQKFFSEREASFVLHT---IGKTVEYLH---SQGVVHRDLKP 149
Query: 75 SNILFQEQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
SNIL+ ++S ++ DF +++ + E + T ++ PE + +E CD+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 131 YSF 133
+S
Sbjct: 209 WSL 211
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E + G L D+I RQ F S L I + YLH S+ +V R++KP
Sbjct: 98 LVTELMRGGELLDKIL--RQKFFSEREASFVLHT---IGKTVEYLH---SQGVVHRDLKP 149
Query: 75 SNILFQEQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
SNIL+ ++S ++ DF +++ + E + T ++ PE + +E CD+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 131 YSF 133
+S
Sbjct: 209 WSL 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V+ + L +A +I+ + YL
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 184 YNKFSIKSDVWAF 196
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 133 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 190 YNKFSIKSDVWAF 202
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
GC L LV EY G+ +D + ++P + V + A++ G+AYLH S
Sbjct: 82 GCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQ---GLAYLH---S 133
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--- 121
++ R+VK NIL E + KL DF + + +GT ++ PE I
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPEVILAMDE 188
Query: 122 GDCNEKCDVYSF 133
G + K DV+S
Sbjct: 189 GQYDGKVDVWSL 200
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
GC L LV EY G+ +D + ++P + V + A++ G+AYLH S
Sbjct: 121 GCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQ---GLAYLH---S 172
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--- 121
++ R+VK NIL E + KL DF + + + GT ++ PE I
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDE 227
Query: 122 GDCNEKCDVYSF 133
G + K DV+S
Sbjct: 228 GQYDGKVDVWSL 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 191
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWAL 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 182
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWAL 210
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 217
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWAL 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 188 YNKFSIKSDVWAF 200
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 TLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 217
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWAL 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 189
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWAL 217
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 189
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWAL 217
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 197
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 188 YNKFSIKSDVWAF 200
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 142 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 199 YNKFSIKSDVWAF 211
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----PVTCSLRLKIAMEIAYG 55
+ L+G C +++ EY YG L + + + + + P+ L + ++A G
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYL 114
+A+L S+ + R+V N+L VAK+ DF + I I +G ++
Sbjct: 165 MAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE I + DV+S+
Sbjct: 222 APESIFDCVYTVQSDVWSY 240
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+VFE V G + + P +P++ ++ GI YLH + I+ R++KP
Sbjct: 115 MVFELVNQGPVMEV------PTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKP 165
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
SN+L E K+ DF S +G + +GT ++ PE ++
Sbjct: 166 SNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTPAFMAPESLS 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----PVTCSLRLKIAMEIAYG 55
+ L+G C +++ EY YG L + + + + + P+ L + ++A G
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGTFGYL 114
+A+L S+ + R+V N+L VAK+ DF + I I +G ++
Sbjct: 173 MAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE I + DV+S+
Sbjct: 230 APESIFDCVYTVQSDVWSY 248
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF-----------EPVTCSLRLKIA 49
+ L+G C +++ EY YG L + + R P E ++ L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVM 108
++A G+A+L S+ + R+V N+L VAK+ DF + I I +G
Sbjct: 173 SQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+S+
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSY 254
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 17 FEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSN 76
EY E GTL D I H N + ++ +I ++Y+H S+ I+ R++KP N
Sbjct: 94 MEYCENGTLYDLI-HSENLNQQRDEY---WRLFRQILEALSYIH---SQGIIHRDLKPMN 146
Query: 77 ILFQEQSVAKLFDFSYSESIPE-------------GETRIRGRVMGTFGYLPPEYI-ATG 122
I E K+ DF ++++ G + +GT Y+ E + TG
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 123 DCNEKCDVYSF 133
NEK D+YS
Sbjct: 207 HYNEKIDMYSL 217
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 121
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 182 FTIKSDVWSF 191
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 8 LETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
LET N + +V EY G L D I + + E R +I +AY+H S+
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-----QIVSAVAYVH---SQG 128
Query: 67 IVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV-MGTFGYLPPEYIATGD-C 124
R++KP N+LF E KL DF P+G + G+ Y PE I
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 125 NEKCDVYSF 133
+ DV+S
Sbjct: 188 GSEADVWSM 196
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL E ++ EY+ G+L D + + V + + +IA G+AY+
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R+++ +N+L E + K+ DF + I + E R + PE I
Sbjct: 128 ---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 184
Query: 121 TGDCNEKCDVYSF 133
G K DV+SF
Sbjct: 185 FGCFTIKSDVWSF 197
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
+V EY+ G+L D + TC +IA E + +LH S ++ R+
Sbjct: 94 VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
+K NIL KL DF + I +++ R ++GT ++ PE + K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 132 SF 133
S
Sbjct: 201 SL 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL+G C + LV +Y+ G+L D + R + L L ++IA G+ YL
Sbjct: 78 VRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA----LGPQLLLNWGVQIAKGMYYLE 132
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYI 119
+V RN+ N+L + S ++ DF ++ +P + ++ ++ E I
Sbjct: 133 ---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 120 ATGDCNEKCDVYSF 133
G + DV+S+
Sbjct: 190 HFGKYTHQSDVWSY 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
A EI G+ ++H F +V+R++KP+NIL E ++ D +S+ P
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 105 GRVMGTFGYLPPEYIATG 122
+GT GY+ PE + G
Sbjct: 350 ---VGTHGYMAPEVLQKG 364
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL+G C + LV +Y+ G+L D + R + L L ++IA G+ YL
Sbjct: 96 VRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA----LGPQLLLNWGVQIAKGMYYLE 150
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRVMGTFGYLPPEYI 119
+V RN+ N+L + S ++ DF ++ +P + ++ ++ E I
Sbjct: 151 ---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 120 ATGDCNEKCDVYSF 133
G + DV+S+
Sbjct: 208 HFGKYTHQSDVWSY 221
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
A EI G+ ++H F +V+R++KP+NIL E ++ D +S+ P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 105 GRVMGTFGYLPPEYIATG 122
+GT GY+ PE + G
Sbjct: 351 ---VGTHGYMAPEVLQKG 365
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
A EI G+ ++H F +V+R++KP+NIL E ++ D +S+ P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 105 GRVMGTFGYLPPEYIATG 122
+GT GY+ PE + G
Sbjct: 351 ---VGTHGYMAPEVLQKG 365
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF----SYSESIPEGETRIR 104
A EI G+ ++H F +V+R++KP+NIL E ++ D +S+ P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 105 GRVMGTFGYLPPEYIATG 122
+GT GY+ PE + G
Sbjct: 351 ---VGTHGYMAPEVLQKG 365
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
+V EY+ G+L D + TC +IA E + +LH S ++ R+
Sbjct: 94 VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
+K NIL KL DF + I +++ R ++GT ++ PE + K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 132 SF 133
S
Sbjct: 201 SL 202
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
+ +N +V ++ E +L + H ++ F+ + IA + A G+ YLH ++ I
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHL-HVQETKFQMFQL---IDIARQTAQGMDYLH---AKNI 153
Query: 68 VFRNVKPSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
+ R++K +NI E K+ DF + +S G ++ + G+ ++ PE I D N
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE-QPTGSVLWMAPEVIRMQDNN 212
Query: 126 E---KCDVYSF 133
+ DVYS+
Sbjct: 213 PFSFQSDVYSY 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 15 LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V EY E G LA I ++ + LR+ + +A + ++ R++K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
P+N+ + KL DF + I +T +GT Y+ PE + NEK D++S
Sbjct: 144 PANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q K+ DF ++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 297
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 358 FTIKSDVWSF 367
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 107 AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
+NI E K+ DF + ++R G ++ G+ ++ PE I D N
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 127 -KCDVYSF 133
+ DVY+F
Sbjct: 216 FQSDVYAF 223
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
+V EY+ G+L D + TC +IA E + +LH S ++ R+
Sbjct: 94 VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
+K NIL KL DF + I +++ R ++GT ++ PE + K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 132 SF 133
S
Sbjct: 201 SL 202
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---EIAYGIAYLHVAFSRPIVFRN 71
+V EY+ G+L D + TC +IA E + +LH S ++ R+
Sbjct: 95 VVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 142
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
+K NIL KL DF + I +++ R ++GT ++ PE + K D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 132 SF 133
S
Sbjct: 202 SL 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV E + G L +RI ++ +F S I ++ ++++H +V R++KP
Sbjct: 83 LVMELLNGGELFERI--KKKKHFSETEASY---IMRKLVSAVSHMH---DVGVVHRDLKP 134
Query: 75 SNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+LF +++ K+ DF ++ P ++ T Y PE + +E CD++
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLW 193
Query: 132 SFDGSRDSGHLTGRAWYRSED 152
S G L+G+ ++S D
Sbjct: 194 SL-GVILYTMLSGQVPFQSHD 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 297
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 358 FTIKSDVWSF 367
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 99 AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 151
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE-- 126
+NI E K+ DF + ++R G ++ G+ ++ PE I D N
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 127 -KCDVYSF 133
+ DVY+F
Sbjct: 208 FQSDVYAF 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 15 LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V EY E G LA I ++ + LR+ + +A + ++ R++K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
P+N+ + KL DF + I +T +GT Y+ PE + NEK D++S
Sbjct: 144 PANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWAL 224
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPN--FEPVTCSLRLKIAMEIAYGIAYL 59
+L C + V EYV G L +YH +Q EP A EIA G+ +L
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFY----AAEIAIGLFFL 137
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEY 118
S+ I++R++K N++ + K+ DF E+I +G T GT Y+ PE
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEI 192
Query: 119 IATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
IA + D ++F G L G+A + ED
Sbjct: 193 IAYQPYGKSVDWWAF-GVLLYEMLAGQAPFEGED 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + ++ D+++
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWAL 220
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 32/152 (21%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
+ L+G C L EY +G L D + R +P ++ L A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR--- 106
++A G+ YL + + R++ NIL E VAK+ DF S RG+
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----------RGQEVY 195
Query: 107 VMGTFGYLPPEYIATGDCN-----EKCDVYSF 133
V T G LP ++A N DV+S+
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 227
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 122
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 183 FTIKSDVWSF 192
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 124
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 125 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 185 FTIKSDVWSF 194
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 120
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 181 FTIKSDVWSF 190
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 80 IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRG-----RVMGTFGYLPPEYIATGDCNE--- 126
+NI E K+ DF + ++R G ++ G+ ++ PE I D N
Sbjct: 133 NNIFLHEDLTVKIGDFGLATE----KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 127 KCDVYSF 133
+ DVY+F
Sbjct: 189 QSDVYAF 195
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 107 AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 74 PSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KC 128
+NI E K+ DF + +S G + ++ G+ ++ PE I D N +
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 129 DVYSF 133
DVY+F
Sbjct: 219 DVYAF 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
LVF+ ++ G L D + E VT S + KI + I LH IV R++
Sbjct: 101 LVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDL 150
Query: 73 KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
KP NIL + KL DF +S + GE ++R V GT YL PE I
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGE-KLRS-VCGTPSYLAPEII 195
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 106 AIVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLK 158
Query: 74 PSNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KC 128
+NI E K+ DF + +S G + ++ G+ ++ PE I D N +
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 129 DVYSF 133
DVY+F
Sbjct: 218 DVYAF 222
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
LVF+ ++ G L D + E VT S + KI + I LH IV R++
Sbjct: 101 LVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDL 150
Query: 73 KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
KP NIL + KL DF +S + GE ++R V GT YL PE I
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGE-KLR-EVCGTPSYLAPEII 195
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 32/152 (21%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEP-----------VTCSLRLKIA 49
+ L+G C L EY +G L D + R +P ++ L A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR--- 106
++A G+ YL + + R++ NIL E VAK+ DF S RG+
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----------RGQEVY 185
Query: 107 VMGTFGYLPPEYIATGDCN-----EKCDVYSF 133
V T G LP ++A N DV+S+
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 217
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 187
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 188 YNKFSIKSDVWAF 200
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 85 IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 137
Query: 75 SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
+NI E K+ DF + +S G + ++ G+ ++ PE I D N + D
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 130 VYSF 133
VY+F
Sbjct: 197 VYAF 200
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 85 IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 137
Query: 75 SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
+NI E K+ DF + +S G + ++ G+ ++ PE I D N + D
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 130 VYSF 133
VY+F
Sbjct: 197 VYAF 200
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 38 EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP 97
EP+T + + ++A G+ +L SR + R++ NIL E +V K+ DF + I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 98 EGETRIR-GRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ +R G ++ PE I + K DV+S+
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSY 287
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++L+G C ++ E++ YG L D + R+ N + V + L +A +I+ + YL
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R++ N L E + K+ DF S + + PE +A
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 121 TGDCNEKCDVYSF 133
+ K DV++F
Sbjct: 187 YNKFSIKSDVWAF 199
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
LVF+ ++ G L D + E VT S + KI + I LH IV R++
Sbjct: 88 LVFDLMKKGELFDYLT-------EKVTLSEKETRKIMRALLEVICALH---KLNIVHRDL 137
Query: 73 KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
KP NIL + KL DF +S + GE ++R V GT YL PE I
Sbjct: 138 KPENILLDDDMNIKLTDFGFSCQLDPGE-KLR-EVCGTPSYLAPEII 182
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL--------VDMAAQIASGMAYVE--- 297
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 358 FTIKSDVWSF 367
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 82 IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 134
Query: 75 SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
+NI E K+ DF + +S G + ++ G+ ++ PE I D N + D
Sbjct: 135 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 130 VYSF 133
VY+F
Sbjct: 194 VYAF 197
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 190 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSF 273
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+AYL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 172
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSM 199
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 80 IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 75 SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
+NI E K+ DF + +S G + ++ G+ ++ PE I D N + D
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 130 VYSF 133
VY+F
Sbjct: 192 VYAF 195
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V ++ E +L + H + FE + + IA + A G+ YLH ++ I+ R++K
Sbjct: 80 IVTQWCEGSSLYHHL-HIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHRDLKS 132
Query: 75 SNILFQEQSVAKLFDFSYS--ESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE---KCD 129
+NI E K+ DF + +S G + ++ G+ ++ PE I D N + D
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE-QLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 130 VYSF 133
VY+F
Sbjct: 192 VYAF 195
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 1 MRLIGCCLETENPVLVF-EYVEYGTLADRIYHPRQPNFEP------------VTCSLRLK 47
+ L+G C + P++V E+ ++G L+ + R F P +T +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GR 106
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 155 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSF 238
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
+E P+ +V EY+ G+L D + + + + + +A +IA G+AY+ V
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 385
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL E V K+ DF + I + E R + PE G K
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 129 DVYSF 133
DV+SF
Sbjct: 446 DVWSF 450
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 298
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF I + E R + PE G
Sbjct: 299 RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 359 FTIKSDVWSF 368
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RLIG C + E +LV E G L + R E + S ++ +++ G+ YL
Sbjct: 399 VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE 453
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
+ V RN+ N+L + AK+ DF S+++ ++ R G + + PE
Sbjct: 454 ---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 119 IATGDCNEKCDVYSF 133
I + + DV+S+
Sbjct: 511 INFRKFSSRSDVWSY 525
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G L T +V E G+L DR+ Q +F T S + A+++A G+ YL
Sbjct: 78 IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 132
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
S+ + R++ N+L + + K+ DF ++P+ + ++ F + PE
Sbjct: 133 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 119 IATGDCNEKCDVYSF 133
+ T + D + F
Sbjct: 190 LKTRTFSHASDTWMF 204
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNV 72
LVF+ + G L D + E V S + I + +++LH + IV R++
Sbjct: 177 LVFDLMRKGELFDYLT-------EKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDL 226
Query: 73 KPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
KP NIL + +L DF +S + GE ++R + GT GYL PE +
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGE-KLR-ELCGTPGYLAPEIL 271
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 23 GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ 82
GT A+++ Q P+ + K+ + I + YL ++ R+VKPSNIL E+
Sbjct: 107 GTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDER 161
Query: 83 SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
KL DF S + + + + R G Y+ PE I D + + DV+S
Sbjct: 162 GQIKLCDFGISGRLV--DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSL 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G L T +V E G+L DR+ Q +F T S + A+++A G+ YL
Sbjct: 74 IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
S+ + R++ N+L + + K+ DF ++P+ + ++ F + PE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 119 IATGDCNEKCDVYSF 133
+ T + D + F
Sbjct: 186 LKTRTFSHASDTWMF 200
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G L T +V E G+L DR+ Q +F T S + A+++A G+ YL
Sbjct: 74 IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
S+ + R++ N+L + + K+ DF ++P+ + ++ F + PE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 119 IATGDCNEKCDVYSF 133
+ T + D + F
Sbjct: 186 LKTRTFSHASDTWMF 200
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWAL 220
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G L T +V E G+L DR+ Q +F T S + A+++A G+ YL
Sbjct: 74 IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
S+ + R++ N+L + + K+ DF ++P+ + ++ F + PE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 119 IATGDCNEKCDVYSF 133
+ T + D + F
Sbjct: 186 LKTRTFSHASDTWMF 200
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G L T +V E G+L DR+ Q +F T S + A+++A G+ YL
Sbjct: 78 IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 132
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
S+ + R++ N+L + + K+ DF ++P+ + ++ F + PE
Sbjct: 133 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 119 IATGDCNEKCDVYSF 133
+ T + D + F
Sbjct: 190 LKTRTFSHASDTWMF 204
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G L T +V E G+L DR+ Q +F T S + A+++A G+ YL
Sbjct: 84 IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 138
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
S+ + R++ N+L + + K+ DF ++P+ + ++ F + PE
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 119 IATGDCNEKCDVYSF 133
+ T + D + F
Sbjct: 196 LKTRTFSHASDTWMF 210
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
L+ Y E G+L D + + + V+C L+I + IA G+A+LH+ +P I
Sbjct: 112 LITHYHEMGSLYDYL---QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQGKPAIAH 165
Query: 70 RNVKPSNILFQEQSVAKLFDFS----YSESIPEGETRIRGRVMGTFGYLPPEYIATG--- 122
R++K NIL ++ + D +S+S + + RV GT Y+ PE +
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQV 224
Query: 123 ---DCNEKCDVYSF 133
D ++ D+++F
Sbjct: 225 DCFDSYKRVDIWAF 238
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V EY G+++D I R + L+ ++ G+ YLH F R I R++K
Sbjct: 101 IVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLK---GLEYLH--FMRKI-HRDIKA 153
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
NIL + AKL DF + + + + R V+GT ++ PE I N D++S
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 15 LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V EY E G LA I ++ + LR+ + +A + ++ R++K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
P+N+ + KL DF + + E + +GT Y+ PE + NEK D++S
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDEDFAK-EFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G L T +V E G+L DR+ Q +F T S + A+++A G+ YL
Sbjct: 84 IRLYGVVL-TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLS---RYAVQVAEGMGYLE 138
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEY 118
S+ + R++ N+L + + K+ DF ++P+ + ++ F + PE
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 119 IATGDCNEKCDVYSF 133
+ T + D + F
Sbjct: 196 LKTRTFSHASDTWMF 210
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
L+ Y E G+L D + + + V+C L+I + IA G+A+LH+ +P I
Sbjct: 83 LITHYHEMGSLYDYL---QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 70 RNVKPSNILFQEQSVAKLFDFS----YSESIPEGETRIRGRVMGTFGYLPPEYIATG--- 122
R++K NIL ++ + D +S+S + + RV GT Y+ PE +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQV 195
Query: 123 ---DCNEKCDVYSF 133
D ++ D+++F
Sbjct: 196 DCFDSYKRVDIWAF 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
L+ Y E G+L D + + + V+C L+I + IA G+A+LH+ +P I
Sbjct: 83 LITHYHEMGSLYDYL---QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 70 RNVKPSNILFQEQSVAKLFDFS----YSESIPEGETRIRGRVMGTFGYLPPEYIATG--- 122
R++K NIL ++ + D +S+S + + RV GT Y+ PE +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQV 195
Query: 123 ---DCNEKCDVYSF 133
D ++ D+++F
Sbjct: 196 DCFDSYKRVDIWAF 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + ++ +IA G+AY+
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--------VDMSAQIASGMAYVE--- 128
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR 188
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 189 FTIKSDVWSF 198
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPN--FEPVTCSLRLKIAMEIAYGIAYL 59
+L C + V EYV G L +YH +Q EP + A EIA G+ +L
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHA----VFYAAEIAIGLFFL 458
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEY 118
S+ I++R++K N++ + K+ DF E+I +G T GT Y+ PE
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEI 513
Query: 119 IATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
IA + D ++F G L G+A + ED
Sbjct: 514 IAYQPYGKSVDWWAF-GVLLYEMLAGQAPFEGED 546
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE------------ 98
+I ++Y+H S+ I+ RN+KP NI E K+ DF ++++
Sbjct: 124 QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 99 -GETRIRGRVMGTFGYLPPEYI-ATGDCNEKCDVYSF 133
G + +GT Y+ E + TG NEK D YS
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSL 217
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + +A +IA G+AY+
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------VDMAAQIASGMAYVE--- 131
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 132 RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 192 FTIKSDVWSF 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 10 TENPV-LVFEYVEYGTLADRIYH---PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
T+ P+ ++ E++ G+L D + +QP + + +IA G+A++ R
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 303
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
+ R+++ +NIL V K+ DF + I + E R + PE I G
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 126 EKCDVYSF 133
K DV+SF
Sbjct: 364 IKSDVWSF 371
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RLIG C + E +LV E G L + R E + S ++ +++ G+ YL
Sbjct: 73 VRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLE 127
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
+ V R++ N+L + AK+ DF S+++ ++ R G + + PE
Sbjct: 128 ---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 184
Query: 119 IATGDCNEKCDVYSF 133
I + + DV+S+
Sbjct: 185 INFRKFSSRSDVWSY 199
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 10 TENPV-LVFEYVEYGTLADRIYH---PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
T+ P+ ++ E++ G+L D + +QP + + +IA G+A++ R
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 130
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
+ R+++ +NIL V K+ DF + I + E R + PE I G
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 126 EKCDVYSF 133
K DV+SF
Sbjct: 191 IKSDVWSF 198
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N++ +Q ++ DF ++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL PE I + N+ D ++
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT YL P I + N+ D ++
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWAL 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV + V G L DRI + + +R ++ + YLH IV R++KP
Sbjct: 97 LVMQLVSGGELFDRIVEKGFYTEKDASTLIR-----QVLDAVYYLH---RMGIVHRDLKP 148
Query: 75 SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L+ E+S + DF S+ EG+ + GT GY+ PE +A ++ D +
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCW 206
Query: 132 SF 133
S
Sbjct: 207 SI 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 10 TENPV-LVFEYVEYGTLADRIY-----HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+E P+ +V EY+ G+L D + + R P + ++ +IA G+AY+
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--------VDMSAQIASGMAYVE--- 128
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
V R+++ +NIL E V K+ DF + I + E R + PE G
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 124 CNEKCDVYSF 133
K DV+SF
Sbjct: 189 FTIKSDVWSF 198
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDAQ----RFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + RN
Sbjct: 88 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRN 140
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 141 LATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASD 200
Query: 130 VYSF 133
V+SF
Sbjct: 201 VWSF 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDAQ----RFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDAQ----RFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----PNFEPVTCSLR----LKIAME 51
+ L+G C +++ EY YG L + + + P F +L L + +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 52 IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGT 110
+A G+A+L S+ + R+V N+L VAK+ DF + I I +G
Sbjct: 173 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+S+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSY 252
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTL------------ADRIYHPRQPNFEP------VTC 42
+ L+G C + L+FEY YG L D I + Q E +T
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 43 SLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGET 101
L A ++A G+ +L + V R++ N+L V K+ DF + I +
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 102 RIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
+RG ++ PE + G K DV+S+
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRG--- 105
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++G
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGATW 217
Query: 106 RVMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ GT YL PE I + N+ D ++
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWAL 245
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWAL 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWAL 221
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWAL 225
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 31/157 (19%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVT 41
++L G C + +L+ EY +YG+L + R+ P+ +T
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 42 CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET 101
+ A +I+ G+ YL +V R++ NIL E K+ DF S + E ++
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 102 RIRGRVMGTFGYLPPEYIATGDC-----NEKCDVYSF 133
++ + G +P +++A + DV+SF
Sbjct: 206 XVK----RSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWAL 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 31/157 (19%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVT 41
++L G C + +L+ EY +YG+L + R+ P+ +T
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 42 CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET 101
+ A +I+ G+ YL +V R++ NIL E K+ DF S + E ++
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 102 RIRGRVMGTFGYLPPEYIATGDC-----NEKCDVYSF 133
++ + G +P +++A + DV+SF
Sbjct: 206 XVK----RSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWAL 195
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 80 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 131
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWAL 218
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWAL 202
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWAL 223
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWAL 196
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWAL 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 82 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 133
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWAL 217
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L EY G L DRI P EP + ++ G+ YLH I R++KP
Sbjct: 81 LFLEYCSGGELFDRI-EPDIGMPEPDA----QRFFHQLMAGVVYLH---GIGITHRDIKP 132
Query: 75 SNILFQEQSVAKLFDFSYSESIP-EGETRIRGRVMGTFGYLPPEYIATGDCN-EKCDVYS 132
N+L E+ K+ DF + R+ ++ GT Y+ PE + + + E DV+S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWAL 198
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
EI + YLH + I+ R++KP NIL E ++ DF ++ + PE + +G
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T Y+ PE + + D+++
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWAL 197
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV + V G L DRI + + SL + ++ + YLH IV R++KP
Sbjct: 83 LVMQLVSGGELFDRIL--ERGVYTEKDASL---VIQQVLSAVKYLH---ENGIVHRDLKP 134
Query: 75 SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L+ +E S + DF S+ G I GT GY+ PE +A ++ D +
Sbjct: 135 ENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCW 191
Query: 132 S 132
S
Sbjct: 192 S 192
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANE 165
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSM 192
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RLIG C + + +V E V+ G D + R +L L++ + A G+ YL
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLE 230
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT-FGYLPPEYI 119
S+ + R++ N L E++V K+ DF S +G G + + PE +
Sbjct: 231 ---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 120 ATGDCNEKCDVYSF 133
G + + DV+SF
Sbjct: 288 NYGRYSSESDVWSF 301
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM 108
A +I YLH S +++R++KP N+L +Q ++ DF +++ R++GR
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTW 196
Query: 109 ---GTFGYLPPEYIATGDCNEKCDVYSF 133
GT L PE I + N+ D ++
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWAL 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+++ E +E G L RI F + +I +I I +LH S I R+VK
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAA---EIMRDIGTAIQFLH---SHNIAHRDVK 155
Query: 74 PSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
P N+L+ ++ +V KL DF +++ + + T Y+ PE + ++ CD+
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDM 212
Query: 131 YSF 133
+S
Sbjct: 213 WSL 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 181
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSM 208
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+++ E +E G L RI F + +I +I I +LH S I R+VK
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAA---EIMRDIGTAIQFLH---SHNIAHRDVK 136
Query: 74 PSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
P N+L+ ++ +V KL DF +++ + + T Y+ PE + ++ CD+
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDM 193
Query: 131 YSF 133
+S
Sbjct: 194 WSL 196
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 90 NLKLIMEYLPYGSLRDYL----QAHAERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 130 VYSF 133
V+SF
Sbjct: 203 VWSF 206
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 105 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 157
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 217
Query: 130 VYSF 133
V+SF
Sbjct: 218 VWSF 221
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 94 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 146
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 147 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 206
Query: 130 VYSF 133
V+SF
Sbjct: 207 VWSF 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 105 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 157
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 217
Query: 130 VYSF 133
V+SF
Sbjct: 218 VWSF 221
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 90 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 130 VYSF 133
V+SF
Sbjct: 203 VWSF 206
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 91 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 143
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 144 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 203
Query: 130 VYSF 133
V+SF
Sbjct: 204 VWSF 207
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 92 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 144
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 145 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 204
Query: 130 VYSF 133
V+SF
Sbjct: 205 VWSF 208
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 87 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 130 VYSF 133
V+SF
Sbjct: 200 VWSF 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 31/157 (19%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-------------------PNFEPVT 41
++L G C + +L+ EY +YG+L + R+ P+ +T
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 42 CSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGET 101
+ A +I+ G+ YL +V R++ NIL E K+ DF S + E ++
Sbjct: 149 MGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 102 RIRGRVMGTFGYLPPEYIATGDC-----NEKCDVYSF 133
++ + G +P +++A + DV+SF
Sbjct: 206 YVK----RSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 93 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 145
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 146 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 205
Query: 130 VYSF 133
V+SF
Sbjct: 206 VWSF 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 87 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 130 VYSF 133
V+SF
Sbjct: 200 VWSF 203
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 86 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 138
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 139 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 198
Query: 130 VYSF 133
V+SF
Sbjct: 199 VWSF 202
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 85 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 137
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 138 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 197
Query: 130 VYSF 133
V+SF
Sbjct: 198 VWSF 201
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1 MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
++L+G +E + + +V EY+ G+L D + R + LK ++++ + YL
Sbjct: 68 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
V R++ N+L E +VAK+ DF ++ T+ G++ + PE +
Sbjct: 125 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTGKL--PVKWTAPEAL 177
Query: 120 ATGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 178 REAAFSTKSDVWSF 191
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQ-----PNFEPV--TCSLR--LKIAME 51
+ L+G C +++ EY YG L + + + P F T S R L + +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 52 IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI-RGRVMGT 110
+A G+A+L S+ + R+V N+L VAK+ DF + I I +G
Sbjct: 173 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 111 FGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+S+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSY 252
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 189
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSM 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE------------ 98
+I ++Y+H S+ I+ R++KP NI E K+ DF ++++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 99 -GETRIRGRVMGTFGYLPPEYI-ATGDCNEKCDVYSF 133
G + +GT Y+ E + TG NEK D+YS
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 224
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSM 251
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL + E ++ E++ G+L D + + V + + +IA G+AY+
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
+ + R+++ +N+L E + K+ DF + I + E R + PE I
Sbjct: 127 ---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 121 TGDCNEKCDVYSF 133
G K +V+SF
Sbjct: 184 FGCFTIKSNVWSF 196
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1 MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
++L+G +E + + +V EY+ G+L D + R + LK ++++ + YL
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
V R++ N+L E +VAK+ DF ++ T+ G++ + PE +
Sbjct: 134 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--STQDTGKL--PVKWTAPEAL 186
Query: 120 ATGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 187 REKKFSTKSDVWSF 200
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 118 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 170
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 171 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 230
Query: 130 VYSF 133
V+SF
Sbjct: 231 VWSF 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 10 TENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
+E P+ +V EY+ G+L D + + + + +A ++A G+AY+ +
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 69 FRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKC 128
R+++ +NIL + K+ DF + I + E R + PE G K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 129 DVYSF 133
DV+SF
Sbjct: 188 DVWSF 192
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGR 106
K+++ + G+ YL I+ R+VKPSNIL + KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+GT Y+ PE + + + D++S
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1 MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
++L+G +E + + +V EY+ G+L D + R + LK ++++ + YL
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
V R++ N+L E +VAK+ DF ++ T+ G++ + PE +
Sbjct: 119 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTGKL--PVKWTAPEAL 171
Query: 120 ATGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 172 REKKFSTKSDVWSF 185
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 165 ---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 23/149 (15%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E ++ + A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCA 156
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
++A G+ YL S+ + R++ N+L E +V K+ DF + I I
Sbjct: 157 YQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKKT 209
Query: 110 TFGYLPPEYIATGDC-----NEKCDVYSF 133
T G LP +++A + DV+SF
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RLIG C + + +V E V+ G D + R +L L++ + A G+ YL
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLE 230
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT-FGYLPPEYI 119
S+ + R++ N L E++V K+ DF S +G G + + PE +
Sbjct: 231 ---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 120 ATGDCNEKCDVYSF 133
G + + DV+SF
Sbjct: 288 NYGRYSSESDVWSF 301
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ E++ G+L + Y P+ N + +LK A++I G+ YL SR V R++
Sbjct: 90 LIMEFLPSGSLKE--YLPKNKN--KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAA 142
Query: 75 SNILFQEQSVAKLFDFSYSESI---PEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L + + K+ DF +++I E T R F Y PE + DV+
Sbjct: 143 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVW 201
Query: 132 SF 133
SF
Sbjct: 202 SF 203
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1 MRLIGCCLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
++L+G +E + + +V EY+ G+L D + R + LK ++++ + YL
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI 119
V R++ N+L E +VAK+ DF ++ T+ G++ + PE +
Sbjct: 306 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA--SSTQDTGKL--PVKWTAPEAL 358
Query: 120 ATGDCNEKCDVYSF 133
+ K DV+SF
Sbjct: 359 REKKFSTKSDVWSF 372
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 97 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 152
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 153 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 208
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 209 AIAYRKFTSASDVWSY 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ EY+ YG+L D + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 87 NLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 130 VYSF 133
V+SF
Sbjct: 200 VWSF 203
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ E++ G+L + Y P+ N + +LK A++I G+ YL SR V R++
Sbjct: 102 LIMEFLPSGSLKE--YLPKNKN--KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAA 154
Query: 75 SNILFQEQSVAKLFDFSYSESI---PEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L + + K+ DF +++I E T R F Y PE + DV+
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVW 213
Query: 132 SF 133
SF
Sbjct: 214 SF 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 15 LVFEYVEYGTLADRIYH-PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V E + G L+ I H +Q P K +++ + ++H SR ++ R++K
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVW--KYFVQLCSALEHMH---SRRVMHRDIK 163
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
P+N+ V KL D +T ++GT Y+ PE I N K D++S
Sbjct: 164 PANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 135
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 136 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 191
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 192 AIAYRKFTSASDVWSY 207
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 156
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 157 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 214 L--PVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 89 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 148
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 149 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 206 L--PVKWMAPEALFDRIYTHQSDVWSF 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 86 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 145
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 146 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 202
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 203 L--PVKWMAPEALFDRIYTHQSDVWSF 227
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCA 156
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 157 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 214 L--PVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 165 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 90 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 149
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 150 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 207 L--PVKWMAPEALFDRIYTHQSDVWSF 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V E ++ G L D+I RQ F S + I + YLH ++ +V R++KP
Sbjct: 93 VVTELMKGGELLDKIL--RQKFFSEREAS---AVLFTITKTVEYLH---AQGVVHRDLKP 144
Query: 75 SNILFQEQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
SNIL+ ++S ++ DF +++ + E + T ++ PE + + CD+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLERQGYDAACDI 203
Query: 131 YSF 133
+S
Sbjct: 204 WSL 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF--EPVTCSLRLKIAMEIAYGIAYL 59
+L C + V EYV G L +YH +Q EP A EI+ G+ +L
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFY----AAEISIGLFFL 136
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEY 118
H R I++R++K N++ + K+ DF E + +G T GT Y+ PE
Sbjct: 137 H---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT--TREFCGTPDYIAPEI 191
Query: 119 IATGDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
IA + D +++ G L G+ + ED
Sbjct: 192 IAYQPYGKSVDWWAY-GVLLYEMLAGQPPFDGED 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 165 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 165 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 165 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 107 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 162
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 163 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 218
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 219 AIAYRKFTSASDVWSY 234
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 141
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 142 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 199 L--PVKWMAPEALFDRIYTHQSDVWSF 223
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 156
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 157 YQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 214 L--PVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH SR +V+R++K N++ + K+ DF E I +G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 167
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVD 187
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH SR +V+R++K N++ + K+ DF E I +G T G
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 172
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 173 TPEYLAPEVLEDNDYGRAVD 192
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH SR +V+R++K N++ + K+ DF E I +G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 167
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVD 187
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH SR +V+R++K N++ + K+ DF E I +G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 167
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVD 187
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-----------YHPRQPNFEPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + Y+P E ++ + A
Sbjct: 138 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 197
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 198 YQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 254
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 255 L--PVKWMAPEALFDRIYTHQSDVWSF 279
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCD 129
R+VKP NIL A L DF + + + + G +GT Y PE + + D
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRAD 217
Query: 130 VYSF 133
+Y+
Sbjct: 218 IYAL 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRV 107
A EIA + YLH S IV+R++KP NIL Q L DF E+I T
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTF 199
Query: 108 MGTFGYLPPEYI 119
GT YL PE +
Sbjct: 200 CGTPEYLAPEVL 211
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH SR +V+R++K N++ + K+ DF E I +G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCG 167
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVD 187
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH SR +V+R++K N++ + K+ DF E I +G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCG 167
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVD 187
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH SR +V+R++K N++ + K+ DF E I +G T G
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCG 170
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 171 TPEYLAPEVLEDNDYGRAVD 190
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V E + G L D+I RQ F S + I + YLH ++ +V R++KP
Sbjct: 93 VVTELXKGGELLDKIL--RQKFFSEREAS---AVLFTITKTVEYLH---AQGVVHRDLKP 144
Query: 75 SNILFQEQS----VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
SNIL+ ++S ++ DF +++ + E + T ++ PE + + CD+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCYTANFVAPEVLERQGYDAACDI 203
Query: 131 YSF 133
+S
Sbjct: 204 WSL 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGR 106
+I IAY H S IV RN+KP N+L + + KL DF + + + E
Sbjct: 111 QQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHG 165
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
GT GYL PE + ++ D+++
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWA 191
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGR 106
+I IAY H S IV RN+KP N+L + + KL DF + + + E
Sbjct: 112 QQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHG 166
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
GT GYL PE + ++ D+++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWA 192
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I G R G M ++
Sbjct: 174 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 231 PPEAFMEGIFTSKTDTWSF 249
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGR 106
+I IAY H S IV RN+KP N+L + + KL DF + + + E
Sbjct: 112 QQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHG 166
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
GT GYL PE + ++ D+++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWA 192
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I G R G M ++
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 254 PPEAFMEGIFTSKTDTWSF 272
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGR 106
+I IAY H S IV RN+KP N+L + + KL DF + + + E
Sbjct: 135 QQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHG 189
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYS 132
GT GYL PE + ++ D+++
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWA 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 15 LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V EYV G L D I H R E ++ +I + Y H +V R++K
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCH---RHMVVHRDLK 138
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
P N+L AK+ DF S + +GE +R G+ Y PE I+
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGEF-LRDSC-GSPNYAAPEVIS 183
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF + E PE RG + + PE
Sbjct: 165 ---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF ++ I R G M ++
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 214 PPEAFMEGIFTSKTDTWSF 232
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 4 IGCCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
+ C +TE+ + V EYV G L ++H ++ P + R A EI+ + YLH
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHA-RFYSA-EISLALNYLH-- 138
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIAT 121
R I++R++K N+L + KL D+ E + G+T GT Y+ PE +
Sbjct: 139 -ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRG 195
Query: 122 GD 123
D
Sbjct: 196 ED 197
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
++A G+ YL S+ + R++ N+L E +V K+ DF + I I
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNIDXXKKT 216
Query: 110 TFGYLPPEYIATGDC-----NEKCDVYSF 133
T G LP +++A + DV+SF
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 6 CCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
CC +T + + V E+V G L I R+ F+ A EI + +LH
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARF---YAAEIISALMFLH---D 142
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYI 119
+ I++R++K N+L + KL DF E I G T GT Y+ PE +
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEIL 196
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
+H IV ++KP+N L + + KL DF + + P+ + ++ +GT Y+PPE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 118 YI 119
I
Sbjct: 227 AI 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMG 109
++A G+ YL S+ + R++ N+L E +V K+ DF + I I
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNIDXXKKT 216
Query: 110 TFGYLPPEYIATGDC-----NEKCDVYSF 133
T G LP +++A + DV+SF
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 15 LVFEYVEYGTLADRI-YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
+V EYV G L D I H R E ++ +I + Y H +V R++K
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCH---RHMVVHRDLK 138
Query: 74 PSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
P N+L AK+ DF S + +GE +R G+ Y PE I+
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGEF-LRTSC-GSPNYAAPEVIS 183
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 4 IGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+ C +TE+ +F +EY D ++H ++ P + R A EI+ + YLH
Sbjct: 75 LHSCFQTES--RLFFVIEYVNGGDLMFHMQRQRKLPEEHA-RFYSA-EISLALNYLH--- 127
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIATG 122
R I++R++K N+L + KL D+ E + G+T GT Y+ PE +
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGE 185
Query: 123 DCNEKCDVYSF 133
D D ++
Sbjct: 186 DYGFSVDWWAL 196
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 4 IGCCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
+ C +TE+ + V EYV G L ++H ++ P + R A EI+ + YLH
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHA-RFYSA-EISLALNYLH-- 123
Query: 63 FSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEYIAT 121
R I++R++K N+L + KL D+ E + G+T GT Y+ PE +
Sbjct: 124 -ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRG 180
Query: 122 GDCNEKCDVYSF 133
D D ++
Sbjct: 181 EDYGFSVDWWAL 192
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 3 LIG--CCLETENPVL-VFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYL 59
L+G C +TE+ + V EYV G L ++H ++ P + R A EI+ + YL
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHA-RFYSA-EISLALNYL 169
Query: 60 HVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMGTFGYLPPEY 118
H R I++R++K N+L + KL D+ E + G+T GT Y+ PE
Sbjct: 170 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEI 224
Query: 119 IATGDCNEKCDVYSF 133
+ D D ++
Sbjct: 225 LRGEDYGFSVDWWAL 239
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
LV +Y E+G+L D + N VT +K+A+ A G+A+LH+ +P I
Sbjct: 104 LVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 157
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEYI 119
R++K NIL ++ + D + I +GT Y+ PE +
Sbjct: 158 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
+H IV ++KP+N L + + KL DF + + P+ + ++ +GT Y+PPE
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 118 YI 119
I
Sbjct: 183 AI 184
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
LV +Y E+G+L D + N VT +K+A+ A G+A+LH+ +P I
Sbjct: 81 LVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 134
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEYI 119
R++K NIL ++ + D + I +GT Y+ PE +
Sbjct: 135 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
LV +Y E+G+L D + N VT +K+A+ A G+A+LH+ +P I
Sbjct: 84 LVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 137
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEYI 119
R++K NIL ++ + D + I +GT Y+ PE +
Sbjct: 138 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
+H IV ++KP+N L + + KL DF + + P+ + ++ +GT Y+PPE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 118 YI 119
I
Sbjct: 227 AI 228
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
+H IV ++KP+N L + + KL DF + + P+ + ++ +GT Y+PPE
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
Query: 118 YI 119
I
Sbjct: 179 AI 180
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
LV +Y E+G+L D + N VT +K+A+ A G+A+LH+ +P I
Sbjct: 79 LVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 132
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEYI 119
R++K NIL ++ + D + I +GT Y+ PE +
Sbjct: 133 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
+H IV ++KP+N L + + KL DF + + P+ + ++ +GT Y+PPE
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
Query: 118 YI 119
I
Sbjct: 199 AI 200
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
LV +Y E+G+L D + N VT +K+A+ A G+A+LH+ +P I
Sbjct: 78 LVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 131
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEYI 119
R++K NIL ++ + D + I +GT Y+ PE +
Sbjct: 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
+H IV ++KP+N L + + KL DF + + P+ + ++ +GT Y+PPE
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 118 YI 119
I
Sbjct: 180 AI 181
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQ-EQSVAKLFDFSYSESI-PEG--ETRIRGR-VMG 109
G+ YLH SR I+ +VK N+L + S A L DF ++ + P+G ++ + G + G
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 110 TFGYLPPEYIATGDCNEKCDVYS 132
T ++ PE + C+ K DV+S
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWS 276
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V EY+E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF E PE RG + + PE
Sbjct: 165 ---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
VL+ E V G L D + + T L+ +I G+ YLH S+ I ++K
Sbjct: 91 VLILELVSGGELFDFLAEKESLTEDEATQFLK-----QILDGVHYLH---SKRIAHFDLK 142
Query: 74 PSNILFQEQSV----AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCD 129
P NI+ +++V KL DF + I G + GT ++ PE + + D
Sbjct: 143 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 130 VYS 132
++S
Sbjct: 201 MWS 203
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ + V G L DRI + F + RL ++ + YLH IV R++KP
Sbjct: 93 LIMQLVSGGELFDRIV---EKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKP 144
Query: 75 SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L+ E S + DF S+ E + GT GY+ PE +A ++ D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 132 SF 133
S
Sbjct: 203 SI 204
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
LV +Y E+G+L D + N VT +K+A+ A G+A+LH+ +P I
Sbjct: 117 LVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEYI 119
R++K NIL ++ + D + I +GT Y+ PE +
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
VL+ E V G L D + + T L+ +I G+ YLH S+ I ++K
Sbjct: 105 VLILELVSGGELFDFLAEKESLTEDEATQFLK-----QILDGVHYLH---SKRIAHFDLK 156
Query: 74 PSNILFQEQSV----AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCD 129
P NI+ +++V KL DF + I G + GT ++ PE + + D
Sbjct: 157 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEAD 214
Query: 130 VYS 132
++S
Sbjct: 215 MWS 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
VL+ E V G L D + + T L+ +I G+ YLH S+ I ++K
Sbjct: 84 VLILELVSGGELFDFLAEKESLTEDEATQFLK-----QILDGVHYLH---SKRIAHFDLK 135
Query: 74 PSNILFQEQSV----AKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCD 129
P NI+ +++V KL DF + I G + GT ++ PE + + D
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEAD 193
Query: 130 VYSF 133
++S
Sbjct: 194 MWSI 197
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 16 VFEYVEYGTLADRIYHPRQP-NFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+F V+ D YH +Q +F+ T L E+ + YL ++ I+ R++KP
Sbjct: 90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKL---FICELVMALDYLQ---NQRIIHRDMKP 143
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT 121
NIL E + DF+ + +P ET+I + GT Y+ PE ++
Sbjct: 144 DNILLDEHGHVHITDFNIAAMLPR-ETQI-TTMAGTKPYMAPEMFSS 188
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ + V G L DRI + F + RL ++ + YLH IV R++KP
Sbjct: 93 LIMQLVSGGELFDRIV---EKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKP 144
Query: 75 SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L+ E S + DF S+ E + GT GY+ PE +A ++ D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 132 SF 133
S
Sbjct: 203 SI 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ + V G L DRI + F + RL ++ + YLH IV R++KP
Sbjct: 93 LIMQLVSGGELFDRIV---EKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKP 144
Query: 75 SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L+ E S + DF S+ E + GT GY+ PE +A ++ D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 132 SF 133
S
Sbjct: 203 SI 204
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
L+ + V G L DRI + F + RL ++ + YLH IV R++KP
Sbjct: 93 LIMQLVSGGELFDRIV---EKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKP 144
Query: 75 SNILF---QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
N+L+ E S + DF S+ E + GT GY+ PE +A ++ D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 132 SF 133
S
Sbjct: 203 SI 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 2 RLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHV 61
RL+G CL T LV + + YG L D H R+ N + L M+IA G++YL
Sbjct: 83 RLLGICL-TSTVQLVTQLMPYGCLLD---HVRE-NRGRLGSQDLLNWCMQIAKGMSYLE- 136
Query: 62 AFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR---GRVMGTFGYLPPEY 118
+V R++ N+L + + K+ DF + + ET G+V ++ E
Sbjct: 137 --DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALES 192
Query: 119 IATGDCNEKCDVYSF 133
I + DV+S+
Sbjct: 193 ILRRRFTHQSDVWSY 207
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E S K+ DF + + T G V T
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT---GYV-AT 187
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E S K+ DF + + T G V T
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT---GYV-AT 191
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
EI + +LH I++R++K NIL L DF S+ ET GT
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
Query: 111 FGYLPPEYIATGDC 124
Y+ P+ + GD
Sbjct: 224 IEYMAPDIVRGGDS 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ GI +LH S I+ R++KPSNI+ + + K+ DF + + G + + + T
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVT 188
Query: 111 FGYLPPEYIATGDCNEKCDVYS 132
Y PE I E D++S
Sbjct: 189 RYYRAPEVILGMGYKENVDIWS 210
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ GI +LH S I+ R++KPSNI+ + + K+ DF + + G + + + T
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVT 188
Query: 111 FGYLPPEYIATGDCNEKCDVYS 132
Y PE I E D++S
Sbjct: 189 RYYRAPEVILGMGYKENVDIWS 210
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ GI +LH S I+ R++KPSNI+ + + K+ DF + + G + + + T
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVT 188
Query: 111 FGYLPPEYIATGDCNEKCDVYS 132
Y PE I E D++S
Sbjct: 189 RYYRAPEVILGMGYKENVDIWS 210
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 148 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 205 PPEAFMEGIFTSKTDTWSF 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG----ETRI 103
I E+ G+ YLH + R+VK NIL E ++ DF S + G ++
Sbjct: 121 ILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 104 RGRVMGTFGYLPPEYI-ATGDCNEKCDVYSF 133
R +GT ++ PE + + K D++SF
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 208
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 214 PPEAFMEGIFTSKTDTWSF 232
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 214 PPEAFMEGIFTSKTDTWSF 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 163 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 220 PPEAFMEGIFTSKTDTWSF 238
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG----ETRI 103
I E+ G+ YLH + R+VK NIL E ++ DF S + G ++
Sbjct: 126 ILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 104 RGRVMGTFGYLPPEYI-ATGDCNEKCDVYSF 133
R +GT ++ PE + + K D++SF
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTL-------ADRIYHPR-----------QPNFEPVTC 42
+ L+G C +++ EY YG L A+ + P + + P+
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 43 SLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR 102
L + ++A G+A+L S+ + R+V N+L VAK+ DF + I
Sbjct: 158 RDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 103 I-RGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
I +G ++ PE I + DV+S+
Sbjct: 215 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 246
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 213 PPEAFMEGIFTSKTDTWSF 231
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 39 PVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
P++C LKI + + ++H PI+ R++K N+L Q KL DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 228 PPEAFMEGIFTSKTDTWSF 246
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQ-EQSVAKLFDFSYSESI-PEGETR--IRGR-VMG 109
G+ YLH SR I+ +VK N+L + S A L DF ++ + P+G + + G + G
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 110 TFGYLPPEYIATGDCNEKCDVYS 132
T ++ PE + C+ K DV+S
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWS 257
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF--SYSESIPEGETRIRGRVM 108
++ G+AY H + ++ R++KP N+L E+ KL DF + ++SIP T+ +
Sbjct: 108 QLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDNEV 161
Query: 109 GTFGYLPPE-YIATGDCNEKCDVY 131
T Y PP+ + + D + + D++
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMW 185
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 221 L--PVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 173 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 230 PPEAFMEGIFTSKTDTWSF 248
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPE 117
+H IV ++KP+N L + + KL DF + + P+ ++ +GT Y+PPE
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
Query: 118 YI 119
I
Sbjct: 199 AI 200
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 228 PPEAFMEGIFTSKTDTWSF 246
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV EY+ G L D + R + S L + +I G+ YL SR V R++
Sbjct: 87 LVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 139
Query: 75 SNILFQEQSVAKLFDFSYSESIP--EGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
NIL + ++ K+ DF ++ +P + +R + PE ++ + + DV+S
Sbjct: 140 RNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 199
Query: 133 F 133
F
Sbjct: 200 F 200
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 213 PPEAFMEGIFTSKTDTWSF 231
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V +Y E G L RI + F+ L ++I + ++H R I+ R++K
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQI---LDWFVQICLALKHVH---DRKILHRDIKS 153
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
NI + +L DF + + R +GT YL PE N K D+++
Sbjct: 154 QNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPYYLSPEICENKPYNNKSDIWAL 211
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 228 PPEAFMEGIFTSKTDTWSF 246
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLR--LKIAMEIAYGIAY 58
+R IG L++ ++ E + G L + R +P + ++ L +A +IA G Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 59 LHVAFSRPIVFRNVKPSNILFQ---EQSVAKLFDFSYSESIPEGET-RIRGRVMGTFGYL 114
L + R++ N L VAK+ DF + I R G M ++
Sbjct: 183 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 115 PPEYIATGDCNEKCDVYSF 133
PPE G K D +SF
Sbjct: 240 PPEAFMEGIFTSKTDTWSF 258
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 12 NPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
N L+ E++ YG+L + + Q + E + L+ +I G+ YL ++ + R+
Sbjct: 90 NLKLIMEFLPYGSLREYL----QKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 72 VKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT--FGYLPPEYIATGDCNEKCD 129
+ NIL + ++ K+ DF ++ +P+ + + + G + PE + + D
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 130 VYSF 133
V+SF
Sbjct: 203 VWSF 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V E +E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 165 ---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQ-EQSVAKLFDFSYSESI-PEG--ETRIRGR-VMG 109
G+ YLH +R I+ +VK N+L + S A L DF ++ + P+G ++ + G + G
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 110 TFGYLPPEYIATGDCNEKCDVYS 132
T ++ PE + C+ K D++S
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWS 257
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 93 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 152
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 153 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 210 L--PVKWMAPEALFDRVYTHQSDVWSF 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 15 LVFEYVEYGTLADRI----YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFR 70
LV E V G L DRI Y+ + + V +I +AYLH IV R
Sbjct: 125 LVLELVTGGELFDRIVEKGYYSERDAADAVK---------QILEAVAYLH---ENGIVHR 172
Query: 71 NVKPSNILFQE---QSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
++KP N+L+ + K+ DF S+ I E + ++ V GT GY PE + +
Sbjct: 173 DLKPENLLYATPAPDAPLKIADFGLSK-IVEHQVLMK-TVCGTPGYCAPEILRGCAYGPE 230
Query: 128 CDVYS 132
D++S
Sbjct: 231 VDMWS 235
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQ-EQSVAKLFDFSYSESI-PEG--ETRIRGR-VMG 109
G+ YLH +R I+ +VK N+L + S A L DF ++ + P+G ++ + G + G
Sbjct: 162 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 110 TFGYLPPEYIATGDCNEKCDVYS 132
T ++ PE + C+ K D++S
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWS 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 96 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 155
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 156 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 213 L--PVKWMAPEALFDRVYTHQSDVWSF 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 104 IHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 221 L--PVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 221 L--PVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQ-EQSVAKLFDFSYSESI-PEG--ETRIRGR-VMG 109
G+ YLH +R I+ +VK N+L + S A L DF ++ + P+G ++ + G + G
Sbjct: 176 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 110 TFGYLPPEYIATGDCNEKCDVYS 132
T ++ PE + C+ K D++S
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWS 255
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V EYV G L D I + + + ++ +I G+ Y H +V R++KP
Sbjct: 93 MVMEYVSGGELFDYICKNGRLDEKESR-----RLFQQILSGVDYCHRHM---VVHRDLKP 144
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
N+L AK+ DF S + +GE G+ Y PE I+
Sbjct: 145 ENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPEVIS 188
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
+ ++ G+ Y+H A +V R++KP N+ E K+ DF + + + G V
Sbjct: 131 LVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV 184
Query: 108 MGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW 153
+ T Y PE I + N+ D++S G + LTG+ ++ +D+
Sbjct: 185 V-TRWYRAPEVILSWMHYNQTVDIWSV-GCIMAEMLTGKTLFKGKDY 229
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
+ ++ G+ Y+H A +V R++KP N+ E K+ DF + + + G V
Sbjct: 149 LVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV 202
Query: 108 MGTFGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW 153
+ T Y PE I + N+ D++S G + LTG+ ++ +D+
Sbjct: 203 V-TRWYRAPEVILSWMHYNQTVDIWSV-GCIMAEMLTGKTLFKGKDY 247
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T
Sbjct: 127 QMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVT 181
Query: 111 FGYLPPEYIATGDCNEKCDVYS 132
Y PE I E D++S
Sbjct: 182 RYYRAPEVILGMGYKENVDIWS 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 3 LIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIAME 51
L+G C + ++ EY G L + + R P E +T + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 52 IAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGRVM 108
+A G+ YL S+ + R++ N+L E +V K+ DF + I + GR+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL- 221
Query: 109 GTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE + + DV+SF
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T
Sbjct: 134 QMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVT 188
Query: 111 FGYLPPEYIATGDCNEKCDVYS 132
Y PE I E D++S
Sbjct: 189 RYYRAPEVILGMGYKENVDIWS 210
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T
Sbjct: 134 QMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVT 188
Query: 111 FGYLPPEYIATGDCNEKCDVYS 132
Y PE I E D++S
Sbjct: 189 RYYRAPEVILGMGYKENVDIWS 210
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V E +E G+L D F + L+ IA G+ YL
Sbjct: 80 IRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 135
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 136 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 191
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 192 AIAYRKFTSASDVWSY 207
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 91 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 150
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 151 YQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 208 L--PVKWMAPEALFDRVYTHQSDVWSF 232
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRV 107
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 197 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSF 279
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRV 107
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 199 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSF 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 57 AYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPP 116
A H+ + I+ R++KPSNIL KL DF S + + + R G Y+ P
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD--AGCRPYMAP 194
Query: 117 EYIATGDCNEKCDVYS 132
E I + DV S
Sbjct: 195 ERIDPSASRQGYDVRS 210
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 210 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 267 L--PVKWMAPEALFDRVYTHQSDVWSF 291
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
KIA+ I + +LH S ++ R+VKPSN+L K+ DF S
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV EY+ G L D + Q + + S L + +I G+ YL SR V R++
Sbjct: 90 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 142
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
NIL + ++ K+ DF ++ +P + +R + PE ++ + + DV+S
Sbjct: 143 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 202
Query: 133 F 133
F
Sbjct: 203 F 203
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRV 107
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 204 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSF 286
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIATG-DCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNAMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G +++ ++V E +E G+L D F + L+ IA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLS 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 165 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPE 220
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 221 AIAYRKFTSASDVWSY 236
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 49 AMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIR-GRV 107
+ ++A G+ +L SR + R++ NIL E++V K+ DF + I + +R G
Sbjct: 206 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYSF 133
++ PE I + DV+SF
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSF 288
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV EY+ G L D + Q + + S L + +I G+ YL SR V R++
Sbjct: 91 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 143
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
NIL + ++ K+ DF ++ +P + +R + PE ++ + + DV+S
Sbjct: 144 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 203
Query: 133 F 133
F
Sbjct: 204 F 204
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LV EY+ G L D + Q + + S L + +I G+ YL SR V R++
Sbjct: 103 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 155
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
NIL + ++ K+ DF ++ +P + +R + PE ++ + + DV+S
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215
Query: 133 F 133
F
Sbjct: 216 F 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
KIA+ I + +LH S ++ R+VKPSN+L K+ DF S
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 67 IVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
+V RN+KP N+L + + KL DF + + EGE + GT GYL PE +
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 124 CNEKCDVYS 132
+ D+++
Sbjct: 190 YGKPVDLWA 198
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E S K+ DF + T G V T
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GXV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 185
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 186 APEVILGMGYKENVDIWS 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
G+ YLH + I+ R++KP+N+L E V KL DF ++S
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 187 APEVILGMGYKENVDIWS 204
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 187 APEVILGMGYKENVDIWS 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 7 CLETENP-VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
E++N VLV EYV+ G L DRI N + L +K +I GI ++H +
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRII-DESYNLTELDTILFMK---QICEGIRHMHQMY-- 207
Query: 66 PIVFRNVKPSNIL--FQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPEYI 119
I+ ++KP NIL ++ K+ DF + P + ++ GT +L PE +
Sbjct: 208 -ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVV 260
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 194 APEVILGMGYKENVDIWS 211
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 191
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 192 APEVILGMGYKENVDIWS 209
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 194 APEVILGMGYKENVDIWS 211
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 194 APEVILGMGYKENVDIWS 211
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT---GYV-AT 190
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT---GYV-AT 190
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 232
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT---GYV-AT 196
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 238
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNF-----------EPVTCSLRLKIA 49
+ L+G C + ++ EY G L + + R P E +T +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V ++ DF + I + GR
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 221 L--PVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + + G V T
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXV-AT 205
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 247
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT---GYV-AT 192
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 234
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF----SRP-IVF 69
L+ Y E+G+L D + ++ EP L L++A+ A G+A+LHV +P I
Sbjct: 83 LITHYHEHGSLYDFL---QRQTLEP---HLALRLAVSAACGLAHLHVEIFGTQGKPAIAH 136
Query: 70 RNVKPSNILFQEQSVAKLFDFSYSESIPEGETRI---RGRVMGTFGYLPPEYI---ATGD 123
R+ K N+L + + D + +G + +GT Y+ PE + D
Sbjct: 137 RDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTD 196
Query: 124 CNEK---CDVYSF 133
C E D+++F
Sbjct: 197 CFESYKWTDIWAF 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 231 APEVILGMGYKENVDIWS 248
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ G+ Y+H A I+ R++KPSN+ E S ++ DF + E T G V T
Sbjct: 139 QLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT---GYV-AT 191
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW 153
Y PE + N+ D++S G + L G+A + D+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLQGKALFPGSDY 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 231 APEVILGMGYKENVDIWS 248
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT---GYV-AT 192
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 234
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT---GYV-AT 192
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 45 RLKIAMEIAY------GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE 98
+L +A IAY ++YLH S +V+ ++KP NI+ E+ + KL D I
Sbjct: 178 KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQL-KLIDLGAVSRINS 233
Query: 99 GETRIRGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
G + GT G+ PE + TG D+Y+
Sbjct: 234 -----FGYLYGTPGFQAPEIVRTG-PTVATDIYT 261
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 190
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 39 PVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE 98
P+T S + + + YLH I+ R++K NILF KL DF S
Sbjct: 104 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 160
Query: 99 GETRIRGRVMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
+ R +GT ++ PE + + K DV+S
Sbjct: 161 TXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 200
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ G+ Y+H A I+ R++KPSN+ E S ++ DF + E T G V T
Sbjct: 139 QLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT---GYV-AT 191
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW 153
Y PE + N+ D++S G + L G+A + D+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLQGKALFPGSDY 234
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 182
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 182
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 181
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 192
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 208
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 250
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 187
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 190
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYR 194
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 195 APEVILGMGYKENVDIWS 212
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 196
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 238
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 205
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 247
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 132 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 184
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 181
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 131 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 183
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 191
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 191
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 233
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 143 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 195
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 237
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 181
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 204
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 246
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 197
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 197
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 197
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 191
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 233
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 205
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 247
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 187
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 187 APEVILGMGYKENVDLWS 204
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 197
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 198 APEVILGMGYKENVDLWS 215
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 187
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---GYV-AT 204
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + + G V T
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYV-AT 208
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 250
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF 69
T + VL+ E+ G+L + P N + S L + ++ G+ +L IV
Sbjct: 81 TRHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVH 135
Query: 70 RNVKPSNILF----QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
RN+KP NI+ QSV KL DF + + + E + + GT YL P+
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--XLYGTEEYLHPD 185
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH + +V+R++K N++ + K+ DF E I +G T G
Sbjct: 259 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCG 314
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T YL PE + D D +
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGL 338
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH + +V+R++K N++ + K+ DF E I +G T G
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCG 311
Query: 110 TFGYLPPEYIATGDCNEKCDVYSF 133
T YL PE + D D +
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGL 335
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + + G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + + G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 47 KIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
KIA+ I + +LH S ++ R+VKPSN+L K DF S
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + F SL L A +++ +AYL
Sbjct: 74 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKFSLDLASLIL-YAYQLSTALAYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESIN 185
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 186 FRRFTSASDVWMF 198
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH + +V+R++K N++ + K+ DF E I +G T G
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 171
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 172 TPEYLAPEVLEDNDYGRAVD 191
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + + G V T
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-AT 181
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 223
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH + +V+R++K N++ + K+ DF E I +G T G
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 173
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 174 TPEYLAPEVLEDNDYGRAVD 193
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY-SESIPEGETRIRGRVMG 109
EI + YLH + +V+R++K N++ + K+ DF E I +G T G
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 172
Query: 110 TFGYLPPEYIATGDCNEKCD 129
T YL PE + D D
Sbjct: 173 TPEYLAPEVLEDNDYGRAVD 192
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGRV 107
+I + ++H IV R++KP N+L + + KL DF + + +GE +
Sbjct: 138 QILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGF 193
Query: 108 MGTFGYLPPEYIATGDCNEKCDVYS 132
GT GYL PE + + D+++
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWA 218
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 33 RQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY 92
++ NF+P +A ++ + + +LH + ++KP NILF L++
Sbjct: 113 KENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHK 169
Query: 93 S---ESIPEGETRI------------RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
S +S+ R+ ++ T Y PPE I + CDV+S
Sbjct: 170 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWS 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ DF + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 33 RQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY 92
++ NF+P +A ++ + + +LH + ++KP NILF L++
Sbjct: 122 KENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHK 178
Query: 93 S---ESIPEGETRI------------RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
S +S+ R+ ++ T Y PPE I + CDV+S
Sbjct: 179 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWS 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ Y G L + + R P E +T +
Sbjct: 104 INLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 221 L--PVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V EY+ G L + + + P + + +A++ + + ++H R+VKP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 201
Query: 75 SNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPEYIAT----GDCNEKCD 129
N+L + KL DF + EG R V GT Y+ PE + + G +CD
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECD 260
Query: 130 VYS 132
+S
Sbjct: 261 WWS 263
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + G + + + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYR 192
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 193 APEVILGMGYKENVDLWS 210
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V EY+ G L + + + P + + +A++ + + ++H R+VKP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 201
Query: 75 SNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPEYIAT----GDCNEKCD 129
N+L + KL DF + EG R V GT Y+ PE + + G +CD
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECD 260
Query: 130 VYS 132
+S
Sbjct: 261 WWS 263
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 33 RQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSY 92
++ NF+P +A ++ + + +LH + ++KP NILF L++
Sbjct: 145 KENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHK 201
Query: 93 S---ESIPEGETRI------------RGRVMGTFGYLPPEYIATGDCNEKCDVYS 132
S +S+ R+ ++ T Y PPE I + CDV+S
Sbjct: 202 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWS 256
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L G +++ ++V EY+E G+L D F + L+ I+ G+ YL
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLR---GISAGMKYLS 141
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 142 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTAPE 197
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 198 AIAFRKFTSASDVWSY 213
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 67 IVFRNVKPSNILFQEQ---SVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
+V R++KP N+L + + KL DF + + EGE + GT GYL PE +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 124 CNEKCDVYS 132
+ D+++
Sbjct: 201 YGKPVDLWA 209
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
VLVFE+++ ++ + E VT L +++ GIAY H R ++ R++K
Sbjct: 76 VLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLK 127
Query: 74 PSNILFQEQSVAKLFDFSYSES 95
P N+L + K+ DF + +
Sbjct: 128 PQNLLINREGELKIADFGLARA 149
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 13/122 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V EY+ G L + + + P + + +A++ + + +H R+VKP
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH---------RDVKP 202
Query: 75 SNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIAT--GDC--NEKCDV 130
N+L + KL DF + E +GT Y+ PE + + GD +CD
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 131 YS 132
+S
Sbjct: 263 WS 264
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+RL G + + +++ EY+E G L D+ + F + L+ IA G+ YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLR---GIAAGMKYLA 164
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
+ V R++ NIL V K+ DF S E PE G + + PE
Sbjct: 165 ---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI-PIRWTAPE 220
Query: 118 YIATGDCNEKCDVYSF 133
I+ DV+SF
Sbjct: 221 AISYRKFTSASDVWSF 236
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
+V EY+ G L + + + P + + +A++ + + ++H R+VKP
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 196
Query: 75 SNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMGTFGYLPPEYIAT----GDCNEKCD 129
N+L + KL DF + EG R V GT Y+ PE + + G +CD
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECD 255
Query: 130 VYS 132
+S
Sbjct: 256 WWS 258
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
VLVFE+++ ++ + E VT L +++ GIAY H R ++ R++K
Sbjct: 76 VLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLK 127
Query: 74 PSNILFQEQSVAKLFDFSYSES 95
P N+L + K+ DF + +
Sbjct: 128 PQNLLINREGELKIADFGLARA 149
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 14 VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVK 73
VLVFE+++ ++ + E VT L +++ GIAY H R ++ R++K
Sbjct: 76 VLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLK 127
Query: 74 PSNILFQEQSVAKLFDFSYSES 95
P N+L + K+ DF + +
Sbjct: 128 PQNLLINREGELKIADFGLARA 149
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF------SRP-I 67
L+ + E G+L+D + V+ + IA +A G+AYLH +P I
Sbjct: 99 LITAFHEKGSLSDFL------KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 68 VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETR--IRGRVMGTFGYLPPEYIATGDCN 125
R++K N+L + A + DF + G++ G+V GT Y+ PE + G N
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV-GTRRYMAPE-VLEGAIN 210
Query: 126 EKCDVY 131
+ D +
Sbjct: 211 FQRDAF 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 15 LVFEYVEYG--TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
LVFE+V+ T D++ P P T +++ + ++ G+ +LH S +V R++
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVP-----TETIK-DMMFQLLRGLDFLH---SHRVVHRDL 146
Query: 73 KPSNILFQEQSVAKLFDFSYS 93
KP NIL KL DF +
Sbjct: 147 KPQNILVTSSGQIKLADFGLA 167
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 15 LVFEYVEYG--TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
LVFE+V+ T D++ P P T +++ + ++ G+ +LH S +V R++
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVP-----TETIK-DMMFQLLRGLDFLH---SHRVVHRDL 146
Query: 73 KPSNILFQEQSVAKLFDFSYS 93
KP NIL KL DF +
Sbjct: 147 KPQNILVTSSGQIKLADFGLA 167
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 19/147 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFE-----------PVTCSLRLKIA 49
+ L+G C + ++ Y G L + + R P E +T +
Sbjct: 104 INLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 50 MEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGE---TRIRGR 106
++A G+ YL S+ + R++ N+L E +V K+ DF + I + GR
Sbjct: 164 YQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 107 VMGTFGYLPPEYIATGDCNEKCDVYSF 133
+ ++ PE + + DV+SF
Sbjct: 221 L--PVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 15 LVFEYVEYG--TLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNV 72
LVFE+V+ T D++ P P T +++ + ++ G+ +LH S +V R++
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVP-----TETIK-DMMFQLLRGLDFLH---SHRVVHRDL 146
Query: 73 KPSNILFQEQSVAKLFDFSYSE--SIPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDV 130
KP NIL KL DF + S T V+ T Y PE + D+
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSFQMALT----SVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 131 YS 132
+S
Sbjct: 203 WS 204
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVF 69
T + VL+ E+ G+L + P N + S L + ++ G+ +L IV
Sbjct: 81 TRHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVH 135
Query: 70 RNVKPSNILF----QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
RN+KP NI+ QSV KL DF + + + E + + GT YL P+
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--SLYGTEEYLHPD 185
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ D+ + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 25/102 (24%)
Query: 34 QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF--------QEQSVA 85
Q + P++ + +IA G+A+LH S I+ R++KP NIL +Q+ A
Sbjct: 112 QKEYNPIS------LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 162
Query: 86 K-----LFDFSYSESIPEGETRIRGRV---MGTFGYLPPEYI 119
+ + DF + + G++ R + GT G+ PE +
Sbjct: 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LVFEY ++ L + + R V L I + + + H + R+VKP
Sbjct: 79 LVFEYCDHTVLHELDRYQRG-----VPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKP 130
Query: 75 SNILFQEQSVAKLFDFSYS 93
NIL + SV KL DF ++
Sbjct: 131 ENILITKHSVIKLCDFGFA 149
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 10 TENPV-LVFEYVEYGTLADRIYH---PRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
T+ P+ ++ E++ G+L D + +QP + + +IA G+A++ R
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 297
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCN 125
+ R+++ +NIL V K+ DF G R+ + + PE I G
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADF--------GLARVGAKF--PIKWTAPEAINFGSFT 347
Query: 126 EKCDVYSF 133
K DV+SF
Sbjct: 348 IKSDVWSF 355
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ G+ Y+H A I+ R++KP N+ E K+ DF + + ++ + G V+ T
Sbjct: 136 QMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV-T 188
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE I + D++S G + +TG+ ++ D
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSV-GCIMAEMITGKTLFKGSD 230
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 67 IVFRNVKPSNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
IV R++KP N+L +S KL DF + + +G+ + GT GYL PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 124 CNEKCDVYS 132
+ D+++
Sbjct: 183 YGKPVDMWA 191
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 67 IVFRNVKPSNILFQEQS---VAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGD 123
IV R++KP N+L +S KL DF + + +G+ + GT GYL PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 124 CNEKCDVYS 132
+ D+++
Sbjct: 183 YGKPVDMWA 191
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
++ G+ Y+H A I+ R++KPSN+ E ++ DF + E T G V T
Sbjct: 131 QLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT---GYV-AT 183
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSEDW 153
Y PE + N+ D++S G + L G+A + D+
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLQGKALFPGSDY 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + F SL L A +++ +AYL
Sbjct: 454 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKFSLDLASLIL-YAYQLSTALAYLE 508
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 509 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 566 FRRFTSASDVWMF 578
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 25/102 (24%)
Query: 34 QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF--------QEQSVA 85
Q + P++ + +IA G+A+LH S I+ R++KP NIL +Q+ A
Sbjct: 130 QKEYNPIS------LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 180
Query: 86 K-----LFDFSYSESIPEGETRIRGRV---MGTFGYLPPEYI 119
+ + DF + + G+ R + GT G+ PE +
Sbjct: 181 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 16/132 (12%)
Query: 9 ETENPVLVFEYVEYGTLADRI--YHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRP 66
+ N LV +Y G L + + R P + IA++ + + Y+H
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH------ 198
Query: 67 IVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI-----AT 121
R++KP NIL +L DF + E T +GT Y+ PE +
Sbjct: 199 ---RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 122 GDCNEKCDVYSF 133
G +CD +S
Sbjct: 256 GRYGPECDWWSL 267
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYL 114
GI +LH S I+ R++KPSNI+ + K+ DF + + + + T Y
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRYYR 190
Query: 115 PPEYIATGDCNEKCDVYS 132
PE I E D++S
Sbjct: 191 APEVILGMGYKENVDIWS 208
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 25/102 (24%)
Query: 34 QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF--------QEQSVA 85
Q + P++ + +IA G+A+LH S I+ R++KP NIL +Q+ A
Sbjct: 130 QKEYNPIS------LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 180
Query: 86 K-----LFDFSYSESIPEGETRIRGRV---MGTFGYLPPEYI 119
+ + DF + + G+ R + GT G+ PE +
Sbjct: 181 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ DF + + + G V T
Sbjct: 162 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-AT 214
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N D++S G + LTGR + D
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSV-GCIMAELLTGRTLFPGTD 256
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 25/102 (24%)
Query: 34 QPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF--------QEQSVA 85
Q + P++ + +IA G+A+LH S I+ R++KP NIL +Q+ A
Sbjct: 112 QKEYNPIS------LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 162
Query: 86 K-----LFDFSYSESIPEGETRIRGRV---MGTFGYLPPEYI 119
+ + DF + + G+ R + GT G+ PE +
Sbjct: 163 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL 204
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Query: 41 TCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-----QEQSVAKLFDFSYS 93
T SL+ L IA+++ + Y+H S+ +++R+VKP N L + Q V + DF+ +
Sbjct: 101 TFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
Query: 94 ESIPEGETR 102
+ + ET+
Sbjct: 158 KEYIDPETK 166
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Query: 41 TCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-----QEQSVAKLFDFSYS 93
T SL+ L IA+++ + Y+H S+ +++R+VKP N L + Q V + DF+ +
Sbjct: 122 TFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
Query: 94 ESIPEGETR 102
+ + ET+
Sbjct: 179 KEYIDPETK 187
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 33.1 bits (74), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L G + + +++ EY+E G+L D F + L+ I G+ YL
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS 148
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 149 ---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-PIRWTAPE 204
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 205 AIAYRKFTSASDVWSY 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + F SL L A +++ +AYL
Sbjct: 74 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKFSLDLASLIL-YAYQLSTALAYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 129 ---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 186 FRRFTSASDVWMF 198
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 15 LVFEYVEY---GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
LVF++ E+ G L++ + T S ++ + G+ Y+H I+ R+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIH---RNKILHRD 150
Query: 72 VKPSNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVMGTFGYLPPE-YIATGDCNE 126
+K +N+L V KL DF ++S + R RV+ T Y PPE + D
Sbjct: 151 MKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGP 209
Query: 127 KCDVYSFDGSRDSGHLTGRAWYRS 150
D++ +G + W RS
Sbjct: 210 PIDLWG------AGCIMAEMWTRS 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 15 LVFEYVEY---GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
LVF++ E+ G L++ + T S ++ + G+ Y+H I+ R+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIH---RNKILHRD 150
Query: 72 VKPSNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVMGTFGYLPPE-YIATGDCNE 126
+K +N+L V KL DF ++S + R RV+ T Y PPE + D
Sbjct: 151 MKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGP 209
Query: 127 KCDVYSFDGSRDSGHLTGRAWYRS 150
D++ +G + W RS
Sbjct: 210 PIDLWG------AGCIMAEMWTRS 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 3 LIGCCLE--TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++G C +P L+ ++ YG+L + ++ NF V S +K A+++A G+A+LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLH--EGTNFV-VDQSQAVKFALDMARGMAFLH 128
Query: 61 VAFSRPIVFRNVKPS-NILFQEQSVAK--LFDFSYSESIPEGETRIRGRVMGTFGYLPPE 117
P++ R+ S +++ E A+ + D +S P GR M ++ PE
Sbjct: 129 TL--EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-------GR-MYAPAWVAPE 178
Query: 118 YIATG--DCNEK-CDVYSF 133
+ D N + D++SF
Sbjct: 179 ALQKKPEDTNRRSADMWSF 197
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 39 PVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE 98
P+T S + + + YLH I+ R++K NILF KL DF S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 99 GETRIRGRVMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
R R +GT ++ PE + + K DV+S
Sbjct: 188 TIQR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L G + + +++ EY+E G+L D F + L+ I G+ YL
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS 127
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 128 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-PIRWTAPE 183
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 184 AIAYRKFTSASDVWSY 199
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L G + + +++ EY+E G+L D F + L+ I G+ YL
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS 133
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLPPE 117
V R++ NIL V K+ DF S E PE RG + + PE
Sbjct: 134 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-PIRWTAPE 189
Query: 118 YIATGDCNEKCDVYSF 133
IA DV+S+
Sbjct: 190 AIAYRKFTSASDVWSY 205
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 39 PVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE 98
P+T S + + + YLH I+ R++K NILF KL DF S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 99 GETRIRGRVMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
R R +GT ++ PE + + K DV+S
Sbjct: 188 XIQR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + F SL L A +++ +AYL
Sbjct: 454 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKFSLDLASLIL-YAYQLSTALAYLE 508
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 509 ---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 566 FRRFTSASDVWMF 578
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 15 LVFEYVEY---GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
LVF++ E+ G L++ + T S ++ + G+ Y+H I+ R+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIH---RNKILHRD 150
Query: 72 VKPSNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVMGTFGYLPPE-YIATGDCNE 126
+K +N+L V KL DF ++S + R RV+ T Y PPE + D
Sbjct: 151 MKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGP 209
Query: 127 KCDVYSFDGSRDSGHLTGRAWYRS 150
D++ +G + W RS
Sbjct: 210 PIDLWG------AGCIMAEMWTRS 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 15 LVFEYVEY---GTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
LVF++ E+ G L++ + T S ++ + G+ Y+H I+ R+
Sbjct: 101 LVFDFCEHDLAGLLSNVLVK--------FTLSEIKRVMQMLLNGLYYIH---RNKILHRD 149
Query: 72 VKPSNILFQEQSVAKLFDF----SYSESIPEGETRIRGRVMGTFGYLPPE-YIATGDCNE 126
+K +N+L V KL DF ++S + R RV+ T Y PPE + D
Sbjct: 150 MKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGP 208
Query: 127 KCDVYSFDGSRDSGHLTGRAWYRS 150
D++ +G + W RS
Sbjct: 209 PIDLWG------AGCIMAEMWTRS 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 39 PVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPE 98
P+T S + + + YLH I+ R++K NILF KL DF S
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 99 GETRIRGRVMGTFGYLPPEYIATGDCNE-----KCDVYSF 133
R R +GT ++ PE + + K DV+S
Sbjct: 188 XIQR-RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.7 bits (73), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 15 LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKP 74
LVF+Y+E A R EPV + + ++ I YLH S ++ R++KP
Sbjct: 88 LVFDYMETDLHA----VIRANILEPVH---KQYVVYQLIKVIKYLH---SGGLLHRDMKP 137
Query: 75 SNILFQEQSVAKLFDFSYSES 95
SNIL + K+ DF S S
Sbjct: 138 SNILLNAECHVKVADFGLSRS 158
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 41 TCSLR--LKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-----QEQSVAKLFDFSYS 93
T SL+ L IA+++ + Y+H S+ +++R+VKP N L + Q V + DF +
Sbjct: 101 TFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
Query: 94 ESIPEGETR 102
+ + ET+
Sbjct: 158 KEYIDPETK 166
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L S K+ DF G R+
Sbjct: 134 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDF--------GLARVADPDHDH 182
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 183 TGFL-TEYVAT 192
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + + SL L A +++ +AYL
Sbjct: 79 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLE 133
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 134 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 191 FRRFTSASDVWMF 203
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ F + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ D + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + + SL L A +++ +AYL
Sbjct: 76 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLE 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 131 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 187
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 188 FRRFTSASDVWMF 200
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + + SL L A +++ +AYL
Sbjct: 77 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLE 131
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 132 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 189 FRRFTSASDVWMF 201
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + + SL L A +++ +AYL
Sbjct: 74 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 186 FRRFTSASDVWMF 198
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + + SL L A +++ +AYL
Sbjct: 74 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLE 128
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 186 FRRFTSASDVWMF 198
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
GI +LH S I+ R++KPSNI+ + K+ DF + +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + + SL L A +++ +AYL
Sbjct: 102 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLE 156
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 157 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 214 FRRFTSASDVWMF 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG TENPV + +E TL + + + SL L A +++ +AYL
Sbjct: 71 VKLIGVI--TENPVWII--MELCTLGELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLE 125
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S+ V R++ N+L KL DF S + + + ++ PE I
Sbjct: 126 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 183 FRRFTSASDVWMF 195
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSV--AKLFDFSYSE---SIPEGETR 102
I +I + YLH ++ I R++KP N LF KL DF S+ + GE
Sbjct: 173 IMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 103 IRGRVMGTFGYLPPEYIATGDCNE----KCDVYS 132
GT ++ PE + T NE KCD +S
Sbjct: 230 GMTTKAGTPYFVAPEVLNT--TNESYGPKCDAWS 261
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I + Y H IV R++KP N+L E K+ DF S + +G G+
Sbjct: 121 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGS 175
Query: 111 FGYLPPEYIA 120
Y PE I+
Sbjct: 176 PNYAAPEVIS 185
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I + Y H IV R++KP N+L E K+ DF S + +G G+
Sbjct: 120 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGS 174
Query: 111 FGYLPPEYIA 120
Y PE I+
Sbjct: 175 PNYAAPEVIS 184
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A I+ R++KPSN+ E K+ D + + T G V T
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I + Y H IV R++KP N+L E K+ DF S + +G G+
Sbjct: 115 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGS 169
Query: 111 FGYLPPEYIA 120
Y PE I+
Sbjct: 170 PNYAAPEVIS 179
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I + Y H IV R++KP N+L E K+ DF S + +G G+
Sbjct: 111 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGS 165
Query: 111 FGYLPPEYIA 120
Y PE I+
Sbjct: 166 PNYAAPEVIS 175
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 38 EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
+P+T ++ G+ Y+H A ++ R++KPSN+L E K+ DF + +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 38 EPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
+P+T ++ G+ Y+H S ++ R++KPSN+L E K+ DF + +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 41 TCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-----QEQSVAKLFDFSYSES 95
T L IA+++ + Y+H S+ +++R+VKP N L +++ V + DF ++
Sbjct: 95 TLKTVLMIAIQLLSRMEYVH---SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKE 151
Query: 96 IPEGETR 102
+ ET+
Sbjct: 152 YIDPETK 158
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H S I+ R++KPSN+ E K+ D + + T G V T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT---GYV-AT 185
Query: 111 FGYLPPEYIAT-GDCNEKCDVYSFDGSRDSGHLTGRAWYRSED 152
Y PE + N+ D++S G + LTGR + D
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSV-GCIMAELLTGRTLFPGTD 227
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 25/151 (16%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---------- 50
+ L+G C +++ EY YG L + + R + CS M
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR----DSFICSKTSPAIMEDDELALDLE 161
Query: 51 -------EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP-EGETR 102
++A G+A+L S+ + R++ NIL + K+ DF + I +
Sbjct: 162 DLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
++G ++ PE I + DV+S+
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSY 249
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES--IPEGETRIRGRVM 108
++ G+ + H SR ++ R++KP N+L KL DF + + IP R +
Sbjct: 109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP---VRCYSAEV 162
Query: 109 GTFGYLPPEYI 119
T Y PP+ +
Sbjct: 163 VTLWYRPPDVL 173
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 15/138 (10%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-YHPRQPNFEPVTCSLR-LKIAMEIAYGIAY 58
+RL G ++V EY+E G+L + H Q + LR + M + Y
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGETRIRGRVMGTFGYLP 115
+H R++ N+L V K+ DF S E P+ G + +
Sbjct: 173 VH---------RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI-PIRWTA 222
Query: 116 PEYIATGDCNEKCDVYSF 133
PE IA + DV+SF
Sbjct: 223 PEAIAFRTFSSASDVWSF 240
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 25/151 (16%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---------- 50
+ L+G C +++ EY YG L + + R + CS M
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR----DSFICSKTSPAIMEDDELALDLE 145
Query: 51 -------EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP-EGETR 102
++A G+A+L S+ + R++ NIL + K+ DF + I +
Sbjct: 146 DLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
++G ++ PE I + DV+S+
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSY 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 25/151 (16%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCS----------------- 43
+ L+G C +++ EY YG L + + R + CS
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR----DSFICSKTSPAIMEDDELALDLE 163
Query: 44 LRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP-EGETR 102
L + ++A G+A+L S+ + R++ NIL + K+ DF + I +
Sbjct: 164 DLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
++G ++ PE I + DV+S+
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSY 251
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILF---QEQSVAKLFDFSYSESIPEGETRIRGRV 107
+I + Y H I+ R+VKP N+L + + KL DF + + E GRV
Sbjct: 138 QILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV 194
Query: 108 MGTFGYLPPEYIATGDCNEKCDVY 131
GT ++ PE + + DV+
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVW 217
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 48 IAMEIAYGIAYLH--VAFSR------PIVFRNVKPSNILFQEQSVAKLFDFS----YSES 95
+A ++ G++YLH V + R I R+ K N+L + A L DF +
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 96 IPEGETRIRGRVMGTFGYLPPEYIATGDCNEKCDVY 131
P G+T G+V GT Y+ PE + G N + D +
Sbjct: 177 KPPGDT--HGQV-GTRRYMAPE-VLEGAINFQRDAF 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 17/139 (12%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRI-YHPRQPNFEPVTCSLR-LKIAMEIAYGIAY 58
+RL G ++V EY+E G+L + H Q + LR + M + Y
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 59 LHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS---ESIPEGE-TRIRGRVMGTFGYL 114
+H R++ N+L V K+ DF S E P+ T G++ +
Sbjct: 173 VH---------RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRWT 221
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE IA + DV+SF
Sbjct: 222 APEAIAFRTFSSASDVWSF 240
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 25/151 (16%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---------- 50
+ L+G C +++ EY YG L + + R + CS M
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR----DSFICSKTSPAIMEDDELALDLE 168
Query: 51 -------EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP-EGETR 102
++A G+A+L S+ + R++ NIL + K+ DF + I +
Sbjct: 169 DLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
++G ++ PE I + DV+S+
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSY 256
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 15 LVFEYVEYGTLADRIYH-PRQPNFEPVTC--SLRLKIAMEIAYGIAYLHVAFSRPIVFRN 71
L+F+Y E+ +H + N +PV + + +I GI YLH + ++ R+
Sbjct: 97 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRD 153
Query: 72 VKPSNILFQ----EQSVAKLFDFSYSE--SIPEGETRIRGRVMGTFGYLPPEYI 119
+KP+NIL E+ K+ D ++ + P V+ TF Y PE +
Sbjct: 154 LKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 25/151 (16%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM---------- 50
+ L+G C +++ EY YG L + + R + CS M
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR----DSFICSKTSPAIMEDDELALDLE 168
Query: 51 -------EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIP-EGETR 102
++A G+A+L S+ + R++ NIL + K+ DF + I +
Sbjct: 169 DLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 103 IRGRVMGTFGYLPPEYIATGDCNEKCDVYSF 133
++G ++ PE I + DV+S+
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSY 256
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 68 VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI-----ATG 122
V R++KP N+L +L DF + + T +GT Y+ PE + G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 123 DCNEKCDVYSF 133
+CD +S
Sbjct: 257 KYGPECDWWSL 267
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 68 VFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYI-----ATG 122
V R++KP N+L +L DF + + T +GT Y+ PE + G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 123 DCNEKCDVYSF 133
+CD +S
Sbjct: 273 KYGPECDWWSL 283
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDF--------GLARVADPDHDH 180
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 181 TGFL-TEYVAT 190
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLHVAFSRPIV 68
++ P LVFEY+ T ++Y + ++ M E+ + Y H S+ I+
Sbjct: 112 SKTPALVFEYIN-NTDFKQLYQ--------ILTDFDIRFYMYELLKALDYCH---SKGIM 159
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESI-PEGETRIR 104
R+VKP N++ +Q +L D+ +E P E +R
Sbjct: 160 HRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR 197
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 10 TENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAYGIAYLHVAFSRPIV 68
++ P LVFEY+ T ++Y + ++ M E+ + Y H S+ I+
Sbjct: 107 SKTPALVFEYIN-NTDFKQLYQ--------ILTDFDIRFYMYELLKALDYCH---SKGIM 154
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESI-PEGETRIR 104
R+VKP N++ +Q +L D+ +E P E +R
Sbjct: 155 HRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR 192
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + LV EY G + D + H R E R K +I + Y H F
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFR-QIVSAVQYCHQKF- 133
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG 99
IV R++K N+L K+ DF +S G
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 1 MRLIGCCLETENP-----VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAY 54
+RL+ C + LVFE+V+ R Y + P P + +K M +
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAP--PPGLPAETIKDLMRQFLR 123
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
G+ +LH + IV R++KP NIL KL DF +
Sbjct: 124 GLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + LV EY G + D + H R E R K +I + Y H F
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFR-QIVSAVQYCHQKF- 133
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPP 116
IV R++K N+L K+ DF +S G + TF PP
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK------LDTFCGSPP 177
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + LV EY G + D + H R E R K +I + Y H F
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFR-QIVSAVQYCHQKF- 133
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPP 116
IV R++K N+L K+ DF +S G + TF PP
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK------LDTFCGSPP 177
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG +E E ++ E YG L H + N + + +++I +AYL
Sbjct: 76 VKLIGI-IEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S V R++ NIL KL DF S I + + ++ PE I
Sbjct: 131 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 188 FRRFTTASDVWMF 200
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + LV EY G + D + H R E R K +I + Y H F
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFR-QIVSAVQYCHQKF- 133
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG 99
IV R++K N+L K+ DF +S G
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG +E E ++ E YG L H + N + + +++I +AYL
Sbjct: 88 VKLIGI-IEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S V R++ NIL KL DF S I + + ++ PE I
Sbjct: 143 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 200 FRRFTTASDVWMF 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + LV EY G + D + H R E R K +I + Y H F
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFR-QIVSAVQYCHQKF- 133
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG 99
IV R++K N+L K+ DF +S G
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 8/133 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
++LIG +E E ++ E YG L H + N + + +++I +AYL
Sbjct: 72 VKLIGI-IEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIA 120
S V R++ NIL KL DF S I + + ++ PE I
Sbjct: 127 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 121 TGDCNEKCDVYSF 133
DV+ F
Sbjct: 184 FRRFTTASDVWMF 196
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Query: 47 KIAMEIAYGIAYLHVAFSR------PIVFRNVKPSNILFQEQSVAKLFDFSYSESI---- 96
++A + G+AYLH R I R++ N+L + + DF S +
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 97 ---PEGETRIRGRVMGTFGYLPPEYI 119
P E +GT Y+ PE +
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVL 200
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 1 MRLIGCCLETENP-----VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAY 54
+RL+ C + LVFE+V+ R Y + P P + +K M +
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAP--PPGLPAETIKDLMRQFLR 123
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
G+ +LH + IV R++KP NIL KL DF +
Sbjct: 124 GLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 1 MRLIGCCLETENP-----VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAY 54
+RL+ C + LVFE+V+ R Y + P P + +K M +
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAP--PPGLPAETIKDLMRQFLR 123
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
G+ +LH + IV R++KP NIL KL DF +
Sbjct: 124 GLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 1 MRLIGCCLETENP-----VLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAM-EIAY 54
+RL+ C + LVFE+V+ R Y + P P + +K M +
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAP--PPGLPAETIKDLMRQFLR 131
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
G+ +LH + IV R++KP NIL KL DF +
Sbjct: 132 GLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDF--------GLARVADPDHDH 180
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 181 TGFL-TEYVAT 190
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDF--------GLARVADPDHDH 184
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 185 TGFL-TEYVAT 194
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRIRGRVMG 109
++ G+ YLH S+ IV +++KP N+L K+ +E++ P G
Sbjct: 117 QLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173
Query: 110 TFGYLPPEYIATG 122
+ + PPE IA G
Sbjct: 174 SPAFQPPE-IANG 185
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDF--------GLARVADPDHDH 184
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 185 TGFL-TEYVAT 194
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDF--------GLARVADPDHDH 180
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 181 TGFL-TEYVAT 190
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
+ TEN + LVFE+V+ D + L ++ G+A+ H S
Sbjct: 73 VIHTENKLYLVFEHVD----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SH 125
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ R++KP N+L + KL DF + +
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 152 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDF--------GLARVADPDHDH 200
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 201 TGFL-TEYVAT 210
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 140 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 188
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 189 TGFL-TEYVAT 198
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 180
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 181 TGFL-TEYVAT 190
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 184
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 185 TGFL-TEYVAT 194
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 134 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 182
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 183 TGFL-TEYVAT 192
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 180
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 181 TGFL-TEYVAT 190
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 7 CLETENPV-LVFEYV--EYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAF 63
+ TEN + LVFE+V + T D + L ++ G+A+ H
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMD------ASALTGIPLPLIKSYLFQLLQGLAFCH--- 119
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
S ++ R++KP N+L + KL DF + +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 41 TCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILF-----QEQSVAKLFDFSYSES 95
T L IA+++ + Y+H ++ +++R+VKP N L + Q + DF ++
Sbjct: 98 TLKTVLMIAIQLITRMEYVH---TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKE 154
Query: 96 IPEGETR 102
+ ET+
Sbjct: 155 YIDPETK 161
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 134 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 182
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 183 TGFL-TEYVAT 192
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 130 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 178
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 179 TGFL-TEYVAT 188
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 137 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 185
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 186 TGFL-TEYVAT 195
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 130 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 178
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 179 TGFL-TEYVAT 188
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 138 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 186
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 187 TGFL-TEYVAT 196
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 129 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 177
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 178 TGFL-TEYVAT 187
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 184
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 185 TGFL-TEYVAT 194
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLK--IAMEIAYGIAYLHVAF 63
+ TEN + LVFE+++ + R P L L ++ G+A+ H
Sbjct: 71 VIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH--- 125
Query: 64 SRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
I+ R++KP N+L ++ KL DF + +
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARA 157
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
+ETE + LV EY G + D + + + R +I + Y H F
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQYCHQKF-- 133
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG 99
IV R++K N+L K+ DF +S G
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG 166
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 184
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 185 TGFL-TEYVAT 194
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I G+ Y+H A ++ R++KPSN+L K+ DF G R+
Sbjct: 152 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDF--------GLARVADPDHDH 200
Query: 111 FGYLPPEYIAT 121
G+L EY+AT
Sbjct: 201 TGFL-TEYVAT 210
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGT 110
+I I Y H IV R++KP N+L + K+ DF S + +G G+
Sbjct: 116 QIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--FLKTSCGS 170
Query: 111 FGYLPPEYI 119
Y PE I
Sbjct: 171 PNYAAPEVI 179
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 115 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 156
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 115 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 156
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 56 IAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVM-GTFGYL 114
+A+LH S+ +V +VKP+NI + KL DF + E T G V G Y+
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEGDPRYM 223
Query: 115 PPEYIATGDCNEKCDVYSF 133
PE + G DV+S
Sbjct: 224 APELL-QGSYGTAADVFSL 241
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 154
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVT--CSLRLK-IAMEIAYGIA 57
+R E ++ ++ EY G+LAD I N+ ++ LK + +++ G+
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 58 YLHVAFSRPIVFRNVKPSNILFQEQSV 84
Y+H S +V ++KPSNI S+
Sbjct: 130 YIH---SMSLVHMDIKPSNIFISRTSI 153
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 118 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 159
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 153
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 154
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 153
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVT--CSLRLK-IAMEIAYGIA 57
+R E ++ ++ EY G+LAD I N+ ++ LK + +++ G+
Sbjct: 70 VRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 58 YLHVAFSRPIVFRNVKPSNILFQEQSV 84
Y+H S +V ++KPSNI S+
Sbjct: 126 YIH---SMSLVHMDIKPSNIFISRTSI 149
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 153
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 154
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVT--CSLRLK-IAMEIAYGIA 57
+R E ++ ++ EY G+LAD I N+ ++ LK + +++ G+
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 58 YLHVAFSRPIVFRNVKPSNILFQEQSV 84
Y+H S +V ++KPSNI S+
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSI 151
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 118 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 159
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARA 153
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVT--CSLRLK-IAMEIAYGIA 57
+R E ++ ++ EY G+LAD I N+ ++ LK + +++ G+
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 58 YLHVAFSRPIVFRNVKPSNILFQEQSV 84
Y+H S +V ++KPSNI S+
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSI 151
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARA 153
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARA 154
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARA 155
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARA 152
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES--IPEGETRIRGRVM 108
++ G+ + H SR ++ R++KP N+L KL +F + + IP R +
Sbjct: 109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---VRCYSAEV 162
Query: 109 GTFGYLPPEYI 119
T Y PP+ +
Sbjct: 163 VTLWYRPPDVL 173
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 31 HPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDF 90
HPR EP+ I ++ + YL + + I+ R++K NI+ E KL DF
Sbjct: 124 HPRLD--EPLASY----IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDF 174
Query: 91 SYSESIPEGETRIRGRVMGTFGYLPPEYI 119
+ + G ++ GT Y PE +
Sbjct: 175 GSAAYLERG--KLFYTFCGTIEYCAPEVL 201
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + LV EY G + D + H R E R K +I + Y H +
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFR-QIVSAVQYCHQKY- 134
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPP 116
IV R++K N+L K+ DF +S G + TF PP
Sbjct: 135 --IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK------LDTFCGSPP 178
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + L+ EY G + D + H R E R K +I + Y H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-----RSKFR-QIVSAVQYCH---Q 132
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG 99
+ IV R++K N+L K+ DF +S G
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 7 CLETENPV-LVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSR 65
+ETE + LV EY G + D + + R +I + Y H F
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQKF-- 126
Query: 66 PIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG 99
IV R++K N+L K+ DF +S G
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 159
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 7 CLETENPV-LVFEYVEYGTLAD-RIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
+ETE + L+ EY G + D + H R E R K +I + Y H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-----RSKFR-QIVSAVQYCH---Q 129
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEG 99
+ IV R++K N+L K+ DF +S G
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 164
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
G C + +LV E+V++G+L + + N + +L++A ++A+ + +L
Sbjct: 79 GVCFCGDENILVQEFVKFGSLDTYL----KKNKNCINILWKLEVAKQLAWAMHFLE---E 131
Query: 65 RPIVFRNVKPSNILF 79
++ NV NIL
Sbjct: 132 NTLIHGNVCAKNILL 146
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
+I G+ Y+H A ++ R++KPSN+L K+ DF +
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
+I G+ Y+H A ++ R++KPSN+L K+ DF +
Sbjct: 137 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 176
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYS 93
+I G+ Y+H A ++ R++KPSN+L K+ DF +
Sbjct: 152 QILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLA 191
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 100 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 148
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 149 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 207
Query: 128 CDVYSF 133
D++S
Sbjct: 208 LDMWSL 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+++ H S ++ R++KP N+L + KL DF + +
Sbjct: 111 QLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H I+ R++KP N+L KL DF + +
Sbjct: 127 QLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARA 168
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 99 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 147
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 128 CDVYSF 133
D++S
Sbjct: 207 LDMWSL 212
>pdb|2QLC|A Chain A, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
pdb|2QLC|B Chain B, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
pdb|2QLC|C Chain C, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
pdb|2QLC|D Chain D, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
pdb|2QLC|E Chain E, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
pdb|2QLC|F Chain F, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
pdb|2QLC|G Chain G, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
pdb|2QLC|H Chain H, The Crystal Structure Of Dna Repair Protein Radc From
Chlorobium Tepidum Tls
Length = 126
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 8 LETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPI 67
L T+N +L E + GTL + HPR E ++R E A+ I +H + P
Sbjct: 32 LSTKNQILRHETITIGTLTASLIHPR----EIFKAAIR-----ESAHSIILVH---NHP- 78
Query: 68 VFRNVKPSNILFQEQSVAK 86
+V+PSN Q S+ K
Sbjct: 79 -SGDVQPSNADKQVTSILK 96
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 51 EIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSES 95
++ G+A+ H I+ R++KP N+L KL DF + +
Sbjct: 127 QLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARA 168
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 99 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 147
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 128 CDVYSF 133
D++S
Sbjct: 207 LDMWSL 212
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 101 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 149
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 150 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 208
Query: 128 CDVYSF 133
D++S
Sbjct: 209 LDMWSL 214
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 120 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 168
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 169 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 227
Query: 128 CDVYSF 133
D++S
Sbjct: 228 LDMWSL 233
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 99 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 147
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 128 CDVYSF 133
D++S
Sbjct: 207 LDMWSL 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 1 MRLIGCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLH 60
+ L G + ++V E++E G L D F + L+ IA G+ YL
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLA 162
Query: 61 VAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTF--GYLPPEY 118
V R++ NIL V K+ DF S I + + G + PE
Sbjct: 163 ---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 119 IATGDCNEKCDVYSF 133
I DV+S+
Sbjct: 220 IQYRKFTSASDVWSY 234
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 99 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 147
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 128 CDVYSF 133
D++S
Sbjct: 207 LDMWSL 212
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 55 GIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESI 96
G+ Y+H A I+ R++KP+N L + K+ DF + ++
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 99 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 147
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 128 CDVYSF 133
D++S
Sbjct: 207 LDMWSL 212
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 100 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 148
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 149 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 207
Query: 128 CDVYSF 133
D++S
Sbjct: 208 LDMWSL 213
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 ETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFSRPIV 68
++ P L+FEYV ++ +P +++ +R I E+ + Y H S+ I+
Sbjct: 99 HSKTPSLIFEYVNNTDF--KVLYPTLTDYD-----IRYYI-YELLKALDYCH---SQGIM 147
Query: 69 FRNVKPSNILF-QEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDCNEK 127
R+VKP N++ E +L D+ +E G+ RV + P + D +
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 128 CDVYSF 133
D++S
Sbjct: 207 LDMWSL 212
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 5 GCCLETENPVLVFEYVEYGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVAFS 64
G C+ + +LV E+V++G+L + + N + +L++A ++A A +H
Sbjct: 79 GVCVCGDENILVQEFVKFGSLDTYL----KKNKNCINILWKLEVAKQLA---AAMHFLEE 131
Query: 65 RPIVFRNVKPSNILF 79
++ NV NIL
Sbjct: 132 NTLIHGNVCAKNILL 146
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 48 IAMEIAYGIAYLHVAFSRPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRV 107
+A++ + + Y+H R++KP NIL +L DF + T
Sbjct: 173 MAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA 223
Query: 108 MGTFGYLPPEYI 119
+GT YL PE +
Sbjct: 224 VGTPDYLSPEIL 235
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 67 IVFRNVKPSNILFQEQSVAKLFDFSYSESI---------PEGETRIRGRVMGTFGYLPPE 117
++ R++KPSN+L K+ DF + I P G+ + T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 118 YIAT-GDCNEKCDVYS 132
+ T + DV+S
Sbjct: 193 VMLTSAKYSRAMDVWS 208
>pdb|2Q3N|B Chain B, Agglutinin From Abrus Precatorius (Apa-I)
pdb|2ZR1|B Chain B, Agglutinin From Abrus Precatorius
pdb|2ZR1|D Chain D, Agglutinin From Abrus Precatorius
Length = 267
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 11/61 (18%)
Query: 65 RPIVFRNVKPSNILFQEQSVAKLFDFSYSESIPEGETRIRGRVMGTFGYLPPEYIATGDC 124
PI+ K + V +L+ ++I R +G+ + T+GY P Y+ DC
Sbjct: 37 NPIILWKCK------DQLEVNQLWTLKSDKTI-----RSKGKCLTTYGYAPGNYVMIYDC 85
Query: 125 N 125
+
Sbjct: 86 S 86
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 26/99 (26%)
Query: 10 TENPVLVFEYVE-------YGTLADRIYHPRQPNFEPVTCSLRLKIAMEIAYGIAYLHVA 62
+ P LVFE+V Y TL D +R + EI + Y H
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQTLTD--------------YDIRFYM-YEILKALDYCH-- 148
Query: 63 FSRPIVFRNVKPSNILF-QEQSVAKLFDFSYSESIPEGE 100
S I+ R+VKP N+L E +L D+ +E G+
Sbjct: 149 -SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 67 IVFRNVKPSNILFQEQSVAKLFDFSYSESI---------PEGETRIRGRVMGTFGYLPPE 117
++ R++KPSN+L K+ DF + I P G+ + T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 118 YIAT-GDCNEKCDVYS 132
+ T + DV+S
Sbjct: 193 VMLTSAKYSRAMDVWS 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 67 IVFRNVKPSNILFQEQSVAKLFDFSYSESI---------PEGETRIRGRVMGTFGYLPPE 117
++ R++KPSN+L K+ DF + I P G+ + T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 118 YIAT-GDCNEKCDVYS 132
+ T + DV+S
Sbjct: 193 VMLTSAKYSRAMDVWS 208
>pdb|2AAI|B Chain B, Crystallographic Refinement Of Ricin To 2.5 Angstroms
pdb|3RTI|B Chain B, Crystal Structure Of Ricin Bound With Formycin
Monophosphate
pdb|3RTJ|B Chain B, Crystal Structure Of Ricin Bound With Dinucleotide Apg
Length = 262
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 98 EGETRIRGRVMGTFGYLPPEYIATGDCN 125
+ R G+ + T+GY P Y+ DCN
Sbjct: 54 DNTIRSNGKCLTTYGYSPGVYVMIYDCN 81
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 67 IVFRNVKPSNILFQEQSVAKLFDFSYSESI-PEGETRI 103
I+ R++KP+N L + K+ DF + +I E +T I
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,072,870
Number of Sequences: 62578
Number of extensions: 206273
Number of successful extensions: 1331
Number of sequences better than 100.0: 857
Number of HSP's better than 100.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 460
Number of HSP's that attempted gapping in prelim test: 756
Number of HSP's gapped (non-prelim): 865
length of query: 159
length of database: 14,973,337
effective HSP length: 91
effective length of query: 68
effective length of database: 9,278,739
effective search space: 630954252
effective search space used: 630954252
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)