BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031437
MDPSELRYLEDEDTPMMKTIKGATFGLVSGTIFGTVVATWQDVPRVERRVALPGLIRTLK
MMGNYGMTFAAIGGVYIGVEQLVQHYRMKRDFVNGAVGGFVAGATVLGYKGKSISSAISA
GAALAVTSSLIDAGGQTTRIDNGKEYYPYTTKKRSTADQ

High Scoring Gene Products

Symbol, full name Information P value
AT3G57900 protein from Arabidopsis thaliana 1.5e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031437
        (159 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2095763 - symbol:AT3G57900 "AT3G57900" species...    91  1.5e-11   2


>TAIR|locus:2095763 [details] [associations]
            symbol:AT3G57900 "AT3G57900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132977
            IPI:IPI00525068 PIR:T46012 RefSeq:NP_191349.1 UniGene:At.50288
            EnsemblPlants:AT3G57900.1 GeneID:824959 KEGG:ath:AT3G57900
            TAIR:At3g57900 eggNOG:KOG3225 HOGENOM:HOG000239422
            InParanoid:Q9M2Q8 PhylomeDB:Q9M2Q8 Genevestigator:Q9M2Q8
            Uniprot:Q9M2Q8
        Length = 68

 Score = 91 (37.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
 Identities = 17/30 (56%), Positives = 22/30 (73%)

Query:     1 MDPSELRYLEDEDTPMMKTIKGATFGLVSG 30
             MDP+E+RYLE+E+  MMKT K A  G  +G
Sbjct:     1 MDPTEMRYLEEENGAMMKTFKDAVTGFATG 30

 Score = 79 (32.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
 Identities = 15/20 (75%), Positives = 18/20 (90%)

Query:    75 VYIGVEQLVQHYRMKRDFVN 94
             V+IGVEQLVQ++R KRDF N
Sbjct:    35 VFIGVEQLVQNFRAKRDFFN 54


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      159       131   0.00091  102 3  11 22  0.40    31
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  562 (60 KB)
  Total size of DFA:  121 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.90u 0.15s 10.05t   Elapsed:  00:00:01
  Total cpu time:  9.90u 0.15s 10.05t   Elapsed:  00:00:01
  Start:  Sat May 11 02:18:34 2013   End:  Sat May 11 02:18:35 2013

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