BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031440
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R833|ACO13_PONAB Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1
Length = 140
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 51 PGLVSCTFKVPPRLTDRNGNLANGAIANLVDEVGG-AVVYVE-GLPMKVSVDMSISFVST 108
PG V C KV T+ G L G A LVD + A++ E G P VSVDM+I+++S
Sbjct: 35 PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAP-GVSVDMNITYMSP 93
Query: 109 AKVNDELEITGRVLGQRGGYSGTIVLMRNKATGEVIAEGRHS 150
AK+ +++ IT VL Q + T V + NKATG++IA+GRH+
Sbjct: 94 AKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135
>sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1
Length = 140
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 51 PGLVSCTFKVPPRLTDRNGNLANGAIANLVDEVGG-AVVYVE-GLPMKVSVDMSISFVST 108
PG V C KV T+ G L G A LVD + A++ E G P VSVDM+I+++S
Sbjct: 35 PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAP-GVSVDMNITYMSP 93
Query: 109 AKVNDELEITGRVLGQRGGYSGTIVLMRNKATGEVIAEGRHS 150
AK+ +++ IT VL Q + T V + NKATG++IA+GRH+
Sbjct: 94 AKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135
>sp|Q9CQR4|ACO13_MOUSE Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1
Length = 140
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 38 DFALRGIRVDRVEPGLVSCTFKVPPRLTDRNGNLANGAIANLVDEVGG-AVVYVE-GLPM 95
D L + + P + C KV + T++ G L G A LVD + A++ E G P
Sbjct: 22 DRVLEKVTLVSAAPEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAP- 80
Query: 96 KVSVDMSISFVSTAKVNDELEITGRVLGQRGGYSGTIVLMRNKATGEVIAEGRHS 150
VSVDM+I+++S AK+ +E+ IT +L Q + V + NK TG++IA+GRH+
Sbjct: 81 GVSVDMNITYMSPAKIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135
>sp|P87304|YB22_SCHPO Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC31F10.02 PE=3 SV=1
Length = 161
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 35/139 (25%)
Query: 36 YEDFALRGIRVDRVEPGLVSCTFKVPPRLTDRNGNLANGAIANLVDEVGGAVVYVEGLPM 95
++ + I++ PG V C+ K+ +R GNL G IA L D G + GL +
Sbjct: 27 FDAHVVSDIQIISAVPGFVECSLKLQKHHLNRMGNLHGGCIAALTDLGGSLALASRGLFI 86
Query: 96 K-VSVDMSISFVSTAKVNDELEITGRVLGQRGGYSGTIVLMRNK---------------- 138
VS+DM+ +F+ Q GG G+ +L+ K
Sbjct: 87 SGVSIDMNQTFL-----------------QSGGTLGSSILLHAKCDRLGSNIAFTSVDFL 129
Query: 139 -ATGEVIAEGRHSLFGRQP 156
++ EV A+GRH+ F R
Sbjct: 130 TSSNEVFAKGRHTKFVRNA 148
>sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6 OS=Caenorhabditis elegans GN=F42H10.6
PE=1 SV=2
Length = 169
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 56 CTFKVPPRLTDRNGNLANGAIANLVDEVG----GAVVYVEGLPMKVSVDMSISFVSTAKV 111
C V + + G L G A L D + G V +G+ SV++++S++ KV
Sbjct: 56 CEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGM---ASVELAVSYLLPVKV 112
Query: 112 NDELEITGRVLGQRGGYSGTIVLMRNKATGEVIAEGRHSL 151
D LEIT VL + T R K+ G++ A+G+H+L
Sbjct: 113 GDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHTL 152
>sp|Q5FLZ3|GCP_LACAC Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56
/ N2 / NCFM) GN=gcp PE=3 SV=1
Length = 349
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 86 AVVYVEGLPMKVSVDMSISFVSTAKVNDELEITGRVLGQRGGYSGTIVLMRNKATGEVIA 145
AV G+P+ + VD + + A++ DE+E L GG++ IVL+++ E+I
Sbjct: 103 AVSMATGIPL-IGVDHIMGHIMAAQLKDEIEYPAIALQVSGGHT-EIVLLKDPTHFEIIG 160
Query: 146 EGRHSLFGRQPSKM 159
+ R G K+
Sbjct: 161 DTRDDAAGEAYDKI 174
>sp|Q24SR6|LEPA_DESHY Elongation factor 4 OS=Desulfitobacterium hafniense (strain Y51)
GN=lepA PE=3 SV=1
Length = 601
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 49 VEPGLVSCTFKVPPRLTDRNGNLANGAIANLVDEVGGAVVYVEGLPMKVSVDMSISFVST 108
+E L + KVPP D N L + D GA+ YV + +V+ I +S+
Sbjct: 173 IEDILEAVVAKVPPPQGDDNTPLKALIFDSYFDAYKGAISYVRVMEGRVAKGTQIKMMSS 232
Query: 109 AKVNDELEI-----TGRVL-----GQRGGYSGTIVLMRNKATGEVIAEGRHSLFGRQP 156
KV D E+ R++ GQ G + +I +R+ G+ I + ++ P
Sbjct: 233 GKVFDVTEVGMFTPALRIVDEIKAGQVGYIAASIKNVRDTQVGDTITDAENAALYPLP 290
>sp|B8FUP2|LEPA_DESHD Elongation factor 4 OS=Desulfitobacterium hafniense (strain DCB-2 /
DSM 10664) GN=lepA PE=3 SV=1
Length = 601
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 49 VEPGLVSCTFKVPPRLTDRNGNLANGAIANLVDEVGGAVVYVEGLPMKVSVDMSISFVST 108
+E L + KVPP D N L + D GA+ YV + +V+ I +S+
Sbjct: 173 IEDILEAVVAKVPPPQGDDNTPLKALIFDSYFDAYKGAISYVRVMEGRVAKGTQIKMMSS 232
Query: 109 AKVNDELEI-----TGRVL-----GQRGGYSGTIVLMRNKATGEVIAEGRHSLFGRQP 156
KV D E+ R++ GQ G + +I +R+ G+ I + ++ P
Sbjct: 233 GKVFDVTEVGMFTPALRIVDEIKAGQVGYIAASIKNVRDTQVGDTITDAENAALYPLP 290
>sp|Q566R0|THEM4_RAT Acyl-coenzyme A thioesterase THEM4 OS=Rattus norvegicus GN=Them4
PE=2 SV=1
Length = 230
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 54 VSCTFKVPPRLTDRNGNLANGAIANLVDEVGGAVVYVEGLPMKVSVDMS----ISFVSTA 109
+ C F+ L G + GAIA ++D G + EG+ M ++++ I +S
Sbjct: 125 IVCLFQGGLHLQGMPGFVHGGAIATIIDITAGMCAFSEGIVMTANLNIDYKKPIPLLSVV 184
Query: 110 KVNDELE-ITGRVL 122
VN +L+ I GR L
Sbjct: 185 VVNSQLQKIEGRKL 198
>sp|Q74KY8|GCP_LACJO Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 /
NCC 533) GN=gcp PE=3 SV=1
Length = 348
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 92 GLPMKVSVDMSISFVSTAKVNDELEITGRVLGQRGGYSGTIVLMRNKATGEVIAEGRHSL 151
G+P+ + VD + + A++ DE+E L GG++ IVLM++ E++ + R
Sbjct: 108 GIPL-IGVDHIMGHIMAAQLKDEIEYPALALQVSGGHT-EIVLMKDPIHFEIVGDTRDDA 165
Query: 152 FGRQPSKM 159
G K+
Sbjct: 166 AGEAYDKI 173
>sp|Q045T6|GCP_LACGA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
GN=gcp PE=3 SV=1
Length = 348
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 92 GLPMKVSVDMSISFVSTAKVNDELEITGRVLGQRGGYSGTIVLMRNKATGEVIAEGRHSL 151
G+P+ + VD + + A++ DE+E L GG++ IVLM++ E++ + R
Sbjct: 108 GIPL-IGVDHIMGHIMAAQLKDEIEYPALALQVSGGHT-EIVLMKDPIHFEIVGDTRDDA 165
Query: 152 FGRQPSKM 159
G K+
Sbjct: 166 AGEAYDKI 173
>sp|B0SS01|MNMG_LEPBP tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Leptospira biflexa serovar Patoc (strain Patoc 1 /
ATCC 23582 / Paris) GN=mnmG PE=3 SV=1
Length = 624
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 3 KARQCLELNQEESDSVARLAIHPYRVGATEFSFYEDFALRGIRVDRVEPGLVSCTFKVPP 62
+A L L Q+ +D RL + Y +G E S Y+D R R++ ++ L K P
Sbjct: 434 RAEYRLLLRQDNADQ--RLMQYGYEMGLVEESLYKDMKDRYARIESIKSHLFVSAMKPSP 491
Query: 63 RLT 65
LT
Sbjct: 492 ELT 494
>sp|B0S904|MNMG_LEPBA tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Leptospira biflexa serovar Patoc (strain Patoc 1 /
Ames) GN=mnmG PE=3 SV=1
Length = 624
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 3 KARQCLELNQEESDSVARLAIHPYRVGATEFSFYEDFALRGIRVDRVEPGLVSCTFKVPP 62
+A L L Q+ +D RL + Y +G E S Y+D R R++ ++ L K P
Sbjct: 434 RAEYRLLLRQDNADQ--RLMQYGYEMGLVEESLYKDMKDRYARIESIKSHLFVSAMKPSP 491
Query: 63 RLT 65
LT
Sbjct: 492 ELT 494
>sp|Q9P7T1|SIB1_SCHPO Hydroxamate-type ferrichrome siderophore peptide synthetase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sib1 PE=1 SV=1
Length = 4924
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 42 RGIRVDRVEPGLVSCTFKVPPRLTDRNGNLANGA--IANLVDEVGGAVVYVE--GLPMKV 97
R + VD ++ L VP R+TD L A I + ++E+ G + Y+ LP+
Sbjct: 4767 RTLDVDNIDELLFPTFNVVPLRVTDTFRPLGEIALEIQSFLNEISGNLQYISLLDLPVHG 4826
Query: 98 SVDMSISFVSTAKVND 113
+D++++F+ST N+
Sbjct: 4827 MMDIAVNFLSTGDNNE 4842
>sp|E3QYP0|AMPP3_COLGM Probable Xaa-Pro aminopeptidase PEPP OS=Colletotrichum graminicola
(strain M1.001 / M2 / FGSC 10212) GN=PEPP PE=3 SV=1
Length = 461
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 49 VEPGLVSCTFKVPPRLTDR-NGNLANGAIANLVDEVGGAVVYVEGLPMKVSVDMSISFVS 107
VEPG+ C+F + P L D + + A+ +VGG V +E + ++ D S +
Sbjct: 390 VEPGIYFCSFIIEPYLKDPVHSKFIDSAVLEKYWDVGG--VRIED-NILITKDGSENLTP 446
Query: 108 TAKVNDELE 116
T K DELE
Sbjct: 447 TIKDPDELE 455
>sp|B0YBJ3|BGLK_ASPFC Probable beta-glucosidase K OS=Neosartorya fumigata (strain CEA10 /
CBS 144.89 / FGSC A1163) GN=bglK PE=3 SV=1
Length = 766
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 26 YRVGATEFSFYEDFALRGIRVDRVEPGLVSCTFKVPPRLTDR 67
Y GAT ++F + A +R +PGL ++ PP + +R
Sbjct: 347 YETGATSYAFIPELAASEVRTPEGQPGLGMRFYRDPPSVQER 388
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,561,178
Number of Sequences: 539616
Number of extensions: 2234213
Number of successful extensions: 5691
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5671
Number of HSP's gapped (non-prelim): 43
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)