BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031443
MATRTTKQQQKAQKQQQGSSSDTNAKVVEKRKPVFTKVDQLKPGTNGHNLTVNVLKSEPV
LPKNRAASPQLRQTRIAECLVGDDTGTILFTARNDQVDLMKPGTTVILRNAKIDMFKGSM
RIAVDKWGRIEATEPAKFVVKEDNNLSLVEYELVNVVEE

High Scoring Gene Products

Symbol, full name Information P value
AT1G23750 protein from Arabidopsis thaliana 4.6e-41
AT2G33845 protein from Arabidopsis thaliana 1.1e-39
AT1G03810 protein from Arabidopsis thaliana 4.3e-38
AT4G28440 protein from Arabidopsis thaliana 8.9e-38
AT1G10590 protein from Arabidopsis thaliana 3.5e-36

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031443
        (159 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2034813 - symbol:AT1G23750 "AT1G23750" species...   436  4.6e-41   1
TAIR|locus:505006287 - symbol:AT2G33845 "AT2G33845" speci...   423  1.1e-39   1
TAIR|locus:2024239 - symbol:AT1G03810 "AT1G03810" species...   408  4.3e-38   1
TAIR|locus:2121313 - symbol:AT4G28440 "AT4G28440" species...   405  8.9e-38   1
TAIR|locus:2019918 - symbol:AT1G10590 "AT1G10590" species...   390  3.5e-36   1


>TAIR|locus:2034813 [details] [associations]
            symbol:AT1G23750 "AT1G23750" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC005990 KO:K07466
            HOGENOM:HOG000237696 ProtClustDB:CLSN2717599 EMBL:AY085502
            EMBL:BT002959 EMBL:BT004437 IPI:IPI00527528 PIR:F86371
            RefSeq:NP_564202.1 UniGene:At.41522 ProteinModelPortal:Q9ZUC0
            SMR:Q9ZUC0 IntAct:Q9ZUC0 PaxDb:Q9ZUC0 PRIDE:Q9ZUC0
            EnsemblPlants:AT1G23750.1 GeneID:838985 KEGG:ath:AT1G23750
            TAIR:At1g23750 eggNOG:NOG298870 InParanoid:Q9ZUC0 OMA:RISECIV
            PhylomeDB:Q9ZUC0 ArrayExpress:Q9ZUC0 Genevestigator:Q9ZUC0
            Uniprot:Q9ZUC0
        Length = 137

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 80/113 (70%), Positives = 96/113 (84%)

Query:    31 RKPVFTKVDQLKPGTNGHNLTVNVLKSEPVLPKNRAASPQLRQTRIAECLVGDDTGTILF 90
             +KP FTKVDQL+PGT+GHN+ V ++ ++ VL K RA  PQ RQ RI+EC+VGD+TG I+F
Sbjct:    10 KKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVGDETGVIVF 69

Query:    91 TARNDQVDLMKPGTTVILRNAKIDMFKGSMRIAVDKWGRIEATEPAKFVVKED 143
             TARNDQVDLMK G+TV LRNAKIDM+KGSMR+AVDKWGR+E TEPA F VKED
Sbjct:    70 TARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKED 122


>TAIR|locus:505006287 [details] [associations]
            symbol:AT2G33845 "AT2G33845" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:U78721
            UniGene:At.19977 KO:K07466 HOGENOM:HOG000237696
            ProtClustDB:CLSN2717599 UniGene:At.37877 UniGene:At.72891
            EMBL:AY087128 EMBL:AY136315 EMBL:BT000423 IPI:IPI00527615
            RefSeq:NP_565774.1 ProteinModelPortal:Q8RYC3 SMR:Q8RYC3
            PaxDb:Q8RYC3 PRIDE:Q8RYC3 EnsemblPlants:AT2G33845.1 GeneID:817953
            KEGG:ath:AT2G33845 TAIR:At2g33845 eggNOG:NOG318723
            InParanoid:Q8RYC3 OMA:RISECLV PhylomeDB:Q8RYC3 ArrayExpress:Q8RYC3
            Genevestigator:Q8RYC3 Uniprot:Q8RYC3
        Length = 182

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 86/116 (74%), Positives = 93/116 (80%)

Query:    29 EKRKPVFTKVDQLKPGTNGHNLTVNVLKSEPVLPKNRAASPQ-LRQTRIAECLVGDDTGT 87
             EK+KPVF KVDQLKPGT+GH LTV V+    V  K  AAS   LR  RI+ECLVGD+T  
Sbjct:    51 EKKKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETAC 110

Query:    88 ILFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRIAVDKWGRIEATEPAKFVVKED 143
             ILFTARNDQV+LMKPG TV LRNAKIDMFKGSMR+AVDKWGRIEATEPA   VKED
Sbjct:   111 ILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKED 166


>TAIR|locus:2024239 [details] [associations]
            symbol:AT1G03810 "AT1G03810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC003027
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K07466
            HOGENOM:HOG000237696 ProtClustDB:CLSN2717599 IPI:IPI00518415
            PIR:F86168 RefSeq:NP_171877.1 UniGene:At.51473
            ProteinModelPortal:Q9ZWA3 SMR:Q9ZWA3 EnsemblPlants:AT1G03810.1
            GeneID:839403 KEGG:ath:AT1G03810 TAIR:At1g03810 eggNOG:NOG289657
            InParanoid:Q9ZWA3 OMA:TQPADFK PhylomeDB:Q9ZWA3
            Genevestigator:Q9ZWA3 Uniprot:Q9ZWA3
        Length = 143

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 82/125 (65%), Positives = 95/125 (76%)

Query:    19 SSSDTNAKVVEKRKPVFTKVDQLKPGTNGHNLTVNVLKSEPVLPKNRAAS---PQLRQTR 75
             ++++TNA    KRKPVF KVDQLKPGT+GH L V VL+S PV P  R +S     +   R
Sbjct:     3 TTANTNATTAPKRKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPR 62

Query:    76 IAECLVGDDTGTILFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRIAVDKWGRIEATEP 135
             IAECL+GDDTG ILFTARNDQVDLMK G TVILRNAKID+FK +MR+AVD+WGRIE T P
Sbjct:    63 IAECLIGDDTGCILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGP 122

Query:   136 AKFVV 140
               F V
Sbjct:   123 VSFEV 127


>TAIR|locus:2121313 [details] [associations]
            symbol:AT4G28440 "AT4G28440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            GO:GO:0005829 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021749
            EMBL:AL161572 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            KO:K07466 EMBL:AY050905 EMBL:AY056432 EMBL:AY091407 EMBL:AY088082
            IPI:IPI00540456 PIR:T04614 RefSeq:NP_194573.1 UniGene:At.23199
            PDB:1WJJ PDBsum:1WJJ ProteinModelPortal:O49453 SMR:O49453
            IntAct:O49453 STRING:O49453 PaxDb:O49453 PRIDE:O49453
            EnsemblPlants:AT4G28440.1 GeneID:828961 KEGG:ath:AT4G28440
            TAIR:At4g28440 eggNOG:NOG287921 HOGENOM:HOG000237696
            InParanoid:O49453 OMA:IVECLIG PhylomeDB:O49453
            ProtClustDB:CLSN2717599 EvolutionaryTrace:O49453
            Genevestigator:O49453 GermOnline:AT4G28440 Uniprot:O49453
        Length = 153

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 83/132 (62%), Positives = 98/132 (74%)

Query:    18 GSSSDTNAKVVEKRKPVFTKVDQLKPGTNGHNLTVNVLKSEPVLP---KNRAASPQLRQT 74
             G+++        KRKPVF KV+QLKPGT GH LTV V+++  V+P   K R AS   R +
Sbjct:     5 GTAAVATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPS 64

Query:    75 ---RIAECLVGDDTGTILFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRIAVDKWGRIE 131
                RI ECL+GD+TG ILFTARNDQVDLMKPG TVILRN++IDMFKG+MR+ VDKWGRIE
Sbjct:    65 QPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIE 124

Query:   132 ATEPAKFVVKED 143
             AT  A F VKED
Sbjct:   125 ATGAASFTVKED 136


>TAIR|locus:2019918 [details] [associations]
            symbol:AT1G10590 "AT1G10590" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC007067
            KO:K07466 HOGENOM:HOG000237696 ProtClustDB:CLSN2717599
            IPI:IPI00516961 RefSeq:NP_849633.1 UniGene:At.14987
            ProteinModelPortal:Q9XIJ0 SMR:Q9XIJ0 STRING:Q9XIJ0 PRIDE:Q9XIJ0
            EnsemblPlants:AT1G10590.3 GeneID:837601 KEGG:ath:AT1G10590
            TAIR:At1g10590 InParanoid:Q9XIJ0 OMA:IEYELVS PhylomeDB:Q9XIJ0
            Genevestigator:Q9XIJ0 Uniprot:Q9XIJ0
        Length = 153

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 75/116 (64%), Positives = 93/116 (80%)

Query:    31 RKPVFTKVDQLKPGTNGHNLTVNVLKSEPVLPKN--RAASPQLRQTRIAECLVGDDTGTI 88
             RKPVFTKV++L+PGTNGH+L V V+ ++ V+ +   R   PQ RQ RIAECLVGD+TG I
Sbjct:    23 RKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGDETGII 82

Query:    89 LFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRIAVDKWGRIE-ATEPAKFVVKED 143
             +FTARNDQVD+MK G+ V LRNAKIDM+KGSMR+AVD+WGR+E A EP    VK+D
Sbjct:    83 IFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKDD 138


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      159       132   0.00091  102 3  11 23  0.43    31
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  111 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.12u 0.12s 13.24t   Elapsed:  00:00:01
  Total cpu time:  13.12u 0.12s 13.24t   Elapsed:  00:00:01
  Start:  Sat May 11 02:23:42 2013   End:  Sat May 11 02:23:43 2013

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