BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031444
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 26/154 (16%)
Query: 3 SAATWSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLED 62
S W+ E+KAFENA+A+ E +W+++A VP ++V ++ + Y+ L +D
Sbjct: 22 STTRWTAAENKAFENALAVF-------DENTPNRWERVAERVPGKTVGDVMRQYKELEDD 74
Query: 63 VNAIEAGNIPLPNYVGEDRATSSTKDFHGPSTAADNRSNGVYGSGFSGLSHDPSGHGSKG 122
V++IEAG +P+P Y +TSS S G GF G G K
Sbjct: 75 VSSIEAGFVPVPGY-----STSSPFTLEWGS-----------GHGFDGFKQSYGTGGRKS 118
Query: 123 SS--KSEQERRKGIPWTEEEHRQIWKRRLEKHFK 154
SS SEQER+KG+PWTEEEH+ ++ L+K+ K
Sbjct: 119 SSGRPSEQERKKGVPWTEEEHK-LFLMGLKKYGK 151
>sp|Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1
SV=1
Length = 93
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Query: 3 SAATWSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLED 62
S WS +E+KAFE A+A++ + D +W +A V R+ EE+K+HY+IL+ED
Sbjct: 7 SGRPWSAKENKAFERALAVYDKDTPD-------RWANVARAVEGRTPEEVKKHYEILVED 59
Query: 63 VNAIEAGNIPLPNY 76
+ IE+G +P PNY
Sbjct: 60 IKYIESGKVPFPNY 73
>sp|Q1A173|RADL6_ARATH Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1
Length = 97
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 2 SSAATWSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLE 61
SS + W+ ++K FE A+A++ ++ +W +A V ++VEE+K+HY IL+E
Sbjct: 7 SSISPWTFSQNKMFERALAVY-------DKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 59
Query: 62 DVNAIEAGNIPLPNYVGEDRATSSTKDF 89
D+ IE G +PLPNY + + S DF
Sbjct: 60 DLINIETGRVPLPNYKTFESNSRSINDF 87
>sp|F4JVB8|RADL1_ARATH Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1
Length = 100
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 49/70 (70%), Gaps = 7/70 (10%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ +++KAFE A+A + ++ +WQ +A +V ++ EE+K+HY++L++D+N+I
Sbjct: 14 WTAKQNKAFEQALATY-------DQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSI 66
Query: 67 EAGNIPLPNY 76
E G++P PNY
Sbjct: 67 ENGHVPFPNY 76
>sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1
Length = 81
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+R+E+K FE A+A + ++ +W +A V +S EE+++HY++L+ DVN I
Sbjct: 12 WTRKENKLFERALATY-------DQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDI 64
Query: 67 EAGNIPLPNY 76
E+G P PNY
Sbjct: 65 ESGRYPHPNY 74
>sp|Q1G3C4|RADL4_ARATH Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1
Length = 77
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 11 EDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAIEAGN 70
EDK FE A+A + D +WQKIA V +S EE+K+HY++LL DVN IE+G
Sbjct: 15 EDKQFEMALAKFDKDTPD-------RWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGR 67
Query: 71 IPLPNY 76
P P Y
Sbjct: 68 YPQPRY 73
>sp|Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1
Length = 100
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 10 EEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAIEAG 69
+++K FE A+A++ ++ +WQ +A V S+S EE+K+HY IL+ED+ IE
Sbjct: 15 KQNKMFERALAVY-------DKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQD 67
Query: 70 NIPLPNYVGEDRATSS 85
+PLP Y D + S
Sbjct: 68 LVPLPKYKTVDVGSKS 83
>sp|Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1
Length = 101
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ +++KAFE A+A++ + D +W +A V ++ EE K+ Y +L+ D+ +I
Sbjct: 14 WTVKQNKAFERALAVYDQDTPD-------RWHNVARAVGGKTPEEAKRQYDLLVRDIESI 66
Query: 67 EAGNIPLPNY 76
E G++P P+Y
Sbjct: 67 ENGHVPFPDY 76
>sp|Q6NWJ4|DNJC2_DANRE DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2
SV=1
Length = 618
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 2 SSAATWSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLE 61
S+AA W+ EE K E A+ + + ++W++I+ VP RS ++ + Y+ L+E
Sbjct: 548 SNAAAWTTEEQKLLEQALKTYPVS-------TAERWERISEAVPGRSKKDCMKRYKELVE 600
Query: 62 DVNAIEAG 69
+ A +A
Sbjct: 601 MIKAKKAA 608
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus GN=DNAJC2 PE=2 SV=1
Length = 621
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ EE K E A+ + + ++W+KIA VP R+ ++ + Y+ L+E V A
Sbjct: 554 WTTEEQKLLEQALKTYPVN-------TPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAK 606
Query: 67 EAG 69
+A
Sbjct: 607 KAA 609
>sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1
SV=4
Length = 621
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ EE K E A+ + + ++W+KIA VP R+ ++ + Y+ L+E V A
Sbjct: 554 WTTEEQKLLEQALKTYPVN-------TPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAK 606
Query: 67 EAG 69
+A
Sbjct: 607 KAA 609
>sp|Q4R8H2|DNJC2_MACFA DnaJ homolog subfamily C member 2 OS=Macaca fascicularis GN=DNAJC2
PE=2 SV=1
Length = 621
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ EE K E A+ + + ++W+KIA VP R+ ++ + Y+ L+E V A
Sbjct: 554 WTTEEQKLLEQALKTYPVN-------TPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAK 606
Query: 67 EAG 69
+A
Sbjct: 607 KAA 609
>sp|Q6P2Y3|DNJC2_XENTR DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis GN=dnajc2
PE=2 SV=2
Length = 620
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ EE K E A+ + + ++W+KIA VP RS ++ + Y+ L+E V A
Sbjct: 553 WTTEEQKLLEQALKTYPVN-------TPERWEKIAEAVPGRSKKDCMKRYKELVEMVKAK 605
Query: 67 EAG 69
+A
Sbjct: 606 KAA 608
>sp|Q7TQ20|DNJC2_RAT DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2
PE=2 SV=1
Length = 621
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ EE K E A+ + + ++W+KIA VP R+ ++ + Y+ L+E V A
Sbjct: 554 WTTEEQKLLEQALKTYPVN-------TPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAK 606
Query: 67 EAG 69
+A
Sbjct: 607 KAA 609
>sp|P54103|DNJC2_MOUSE DnaJ homolog subfamily C member 2 OS=Mus musculus GN=Dnajc2 PE=1
SV=2
Length = 621
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAI 66
W+ EE K E A+ + + ++W+KIA VP R+ ++ + Y+ L+E V A
Sbjct: 554 WTTEEQKLLEQALKTYPVN-------TPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAK 606
Query: 67 EAG 69
+A
Sbjct: 607 KAA 609
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 124 SKSEQERRKGIPWTEEEHR 142
S S +ER++G+PWTEEEH+
Sbjct: 85 SNSGRERKRGVPWTEEEHK 103
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 25/113 (22%)
Query: 2 SSAATWSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELK---QHY-- 56
SS W++EE FE +A ++W IA ++ SRSV ++K +HY
Sbjct: 107 SSPVKWTKEEKNLFEQGLATF-----------GRRWTSIARLIGSRSVLQVKNYARHYFK 155
Query: 57 -QILLEDVNAIEA--GNIPLPN---YVGEDRATSSTKDFHGPSTAADNRSNGV 103
+ LE EA G++ +PN Y E T F G AD N +
Sbjct: 156 NKCKLEGFVKEEAKIGSLQIPNLQDYENEPDITDEPTTFRG---RADPNLNAI 205
>sp|P08083|CEAN_ECOLX Colicin-N OS=Escherichia coli GN=cna PE=1 SV=1
Length = 387
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 93 STAADNRSNGVYGSGFSGLSHDPSGHGSKGSSKSEQERRKGIPWTEEEHRQ 143
S ADN N +G G + + SG GS GS+ S + G W+ + H+
Sbjct: 3 SNGADNAHNNAFGGGKNPGIGNTSGAGSNGSASSNRGNSNGWSWSNKPHKN 53
>sp|Q9M3A8|PP273_ARATH Pentatricopeptide repeat-containing protein At3g49240
OS=Arabidopsis thaliana GN=EMB1796 PE=2 SV=1
Length = 629
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 25 EEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDVNAIEAGNI 71
E D++E+++ Q IA+++P ++VEE K+ ++L E+ EAG +
Sbjct: 562 ELADAEEKKKAQSINIAALIPPKAVEEKKETAKLLWEN----EAGGV 604
>sp|P34127|MYBA_DICDI Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2
Length = 1230
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 10/54 (18%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILL 60
W+ EED+ A+ +H Q+ W+KIA P R+ + YQ +L
Sbjct: 152 WTSEEDQILIKAVNLH----------NQKNWKKIAEHFPDRTDVQCHHRYQKVL 195
>sp|D3ZY68|GATC_RAT Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial
OS=Rattus norvegicus GN=Gatc PE=3 SV=1
Length = 155
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 8 SREEDKAFENAIA----MHCIEED-----DSKEEQQQQWQKIASMVPSRSVEELKQHYQI 58
SRE E A+A +H ++ D +S E + + + + EEL Q+
Sbjct: 68 SREAVDRLEKAVAFADQLHAVDTDGVEPLESVLEDRCLYLRSDKVAEGGCAEELLQNSNH 127
Query: 59 LLEDVNAIEAGNIPLPNYVGEDRATSSTKD 88
++E+ GNIPLP+ VG + SST +
Sbjct: 128 VVEEYFVAPPGNIPLPDMVG--KVPSSTAE 155
>sp|Q96KC8|DNJC1_HUMAN DnaJ homolog subfamily C member 1 OS=Homo sapiens GN=DNAJC1 PE=1
SV=1
Length = 554
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 2 SSAATWSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLE 61
S+ W++ + K E A+ + D +W KIA VPS+S E+ Y++L+E
Sbjct: 492 SAEEPWTQNQQKLLELALQQYPRGSSD-------RWDKIARCVPSKSKEDCIARYKLLVE 544
Query: 62 DV 63
V
Sbjct: 545 LV 546
>sp|Q61712|DNJC1_MOUSE DnaJ homolog subfamily C member 1 OS=Mus musculus GN=Dnajc1 PE=1
SV=1
Length = 552
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 7 WSREEDKAFENAIAMHCIEEDDSKEEQQQQWQKIASMVPSRSVEELKQHYQILLEDV 63
W++ + K E A+ + D +W KIA VPS+S E+ Y++L+E V
Sbjct: 495 WTQSQQKLLELALQQYPKGASD-------RWDKIAKCVPSKSKEDCIARYKLLVELV 544
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,167,837
Number of Sequences: 539616
Number of extensions: 2642548
Number of successful extensions: 8061
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 7973
Number of HSP's gapped (non-prelim): 124
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)