Query 031445
Match_columns 159
No_of_seqs 152 out of 1077
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 14:12:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031445.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031445hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01960 nsLTP1 nsLTP1: Non-spe 99.6 2.4E-16 5.2E-21 111.5 4.7 73 27-103 2-79 (89)
2 PF14368 LTP_2: Probable lipid 99.6 4.4E-17 9.6E-22 115.1 0.0 78 25-108 19-96 (96)
3 cd04660 nsLTP_like nsLTP_like: 99.6 9.7E-16 2.1E-20 105.2 4.3 71 28-108 1-73 (73)
4 cd00010 AAI_LTSS AAI_LTSS: Alp 99.6 4.2E-15 9.2E-20 98.3 4.3 62 35-100 1-63 (63)
5 cd01959 nsLTP2 nsLTP2: Non-spe 99.4 1.9E-13 4.1E-18 92.7 4.3 60 34-103 5-64 (66)
6 smart00499 AAI Plant lipid tra 99.2 5.3E-11 1.1E-15 79.7 5.2 75 28-108 1-79 (79)
7 PF00234 Tryp_alpha_amyl: Prot 98.9 9.2E-11 2E-15 82.2 -3.4 69 33-108 13-90 (90)
8 PF14547 Hydrophob_seed: Hydro 97.1 0.00027 5.8E-09 50.2 1.5 77 28-109 2-85 (85)
9 cd01958 HPS_like HPS_like: Hyd 96.4 0.0034 7.4E-08 44.6 3.0 77 27-108 3-85 (85)
10 cd00261 AAI_SS AAI_SS: Alpha-A 86.4 0.48 1E-05 34.0 1.9 71 34-109 14-109 (110)
11 PF07172 GRP: Glycine rich pro 34.5 25 0.00054 25.2 1.5 20 2-21 4-23 (95)
No 1
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.63 E-value=2.4e-16 Score=111.53 Aligned_cols=73 Identities=32% Similarity=0.728 Sum_probs=61.4
Q ss_pred CchhhhcCcccchhhhhCCCCCCChhhHHHHHhhhcc-----CccccccccccCCCCCcccCCcCCHHHHhhhhhcCCCC
Q 031445 27 DCNNVLISMSPCLDYITGNSSRPSSSCCSELSNTVKS-----QPQCLCEVIKGGGSSASSLGINVNQTQAMALPSACNVQ 101 (159)
Q Consensus 27 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~l~~v~~~-----~~~CLC~~i~~~~~~~~~lg~~in~t~A~~LP~~Cgv~ 101 (159)
+|.+++..|.||++|+++++..|+++||++++++++. +.+|+|+++++... .+. +||.+||++||++||++
T Consensus 2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~---~~~-~i~~~~a~~LP~~C~v~ 77 (89)
T cd01960 2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAA---GIS-GLNPGRAAGLPGKCGVS 77 (89)
T ss_pred CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhccccccc---ccC-CCCHHHHHhChHhcccC
Confidence 6999999999999999998888999999999998753 45788888887543 221 39999999999999999
Q ss_pred CC
Q 031445 102 TP 103 (159)
Q Consensus 102 ~p 103 (159)
++
T Consensus 78 ~~ 79 (89)
T cd01960 78 IP 79 (89)
T ss_pred CC
Confidence 76
No 2
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.62 E-value=4.4e-17 Score=115.14 Aligned_cols=78 Identities=45% Similarity=1.037 Sum_probs=48.9
Q ss_pred CCCchhhhcCcccchhhhhCCCCCCChhhHHHHHhhhccCccccccccccCCCCCcccCCcCCHHHHhhhhhcCCCCCCC
Q 031445 25 SSDCNNVLISMSPCLDYITGNSSRPSSSCCSELSNTVKSQPQCLCEVIKGGGSSASSLGINVNQTQAMALPSACNVQTPP 104 (159)
Q Consensus 25 ~~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~l~~v~~~~~~CLC~~i~~~~~~~~~lg~~in~t~A~~LP~~Cgv~~pp 104 (159)
..+|.+.+....+|+.|+.++ ..|++.||++++++++.++.|||+++++... .+++||.+|+++||++||++.++
T Consensus 19 ~~~c~~~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~----~~~~in~~~a~~Lp~~Cg~~~~~ 93 (96)
T PF14368_consen 19 CCSCANSLLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSPGA----PGFGINVTRALALPAACGVPVPP 93 (96)
T ss_dssp TTB-HCCCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CCH----CHHCCTCHHHHHHHHHCTSS-S-
T ss_pred cchhHHHHhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCcccc----ccCCcCHHHHHHHHHHcCCCCCC
Confidence 367866433333448888844 6899999999999988899999999998751 24579999999999999999988
Q ss_pred CCCC
Q 031445 105 VSRC 108 (159)
Q Consensus 105 ~s~C 108 (159)
++|
T Consensus 94 -~~C 96 (96)
T PF14368_consen 94 -SKC 96 (96)
T ss_dssp ----
T ss_pred -CCC
Confidence 777
No 3
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.59 E-value=9.7e-16 Score=105.16 Aligned_cols=71 Identities=34% Similarity=0.733 Sum_probs=59.4
Q ss_pred chhhhcCcccchhhhhCCC--CCCChhhHHHHHhhhccCccccccccccCCCCCcccCCcCCHHHHhhhhhcCCCCCCCC
Q 031445 28 CNNVLISMSPCLDYITGNS--SRPSSSCCSELSNTVKSQPQCLCEVIKGGGSSASSLGINVNQTQAMALPSACNVQTPPV 105 (159)
Q Consensus 28 C~~~l~~L~pCl~yvtg~~--~~Ps~~CC~~l~~v~~~~~~CLC~~i~~~~~~~~~lg~~in~t~A~~LP~~Cgv~~pp~ 105 (159)
|...+..|.||++|+++++ ..|++.||++++++ +..|+|.+++... +. .||.+||.+||++||+++||
T Consensus 1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~~-----~~-~i~~~~a~~Lp~~Cgv~~p~- 70 (73)
T cd04660 1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSLV-----LQ-IIDPDKAVYLPAKCGLPLPP- 70 (73)
T ss_pred CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCCc-----cc-ccCHHHHHHHHHHcCCCCCC-
Confidence 5666778899999999876 36999999999974 5679998887542 33 49999999999999999998
Q ss_pred CCC
Q 031445 106 SRC 108 (159)
Q Consensus 106 s~C 108 (159)
++|
T Consensus 71 ~~C 73 (73)
T cd04660 71 SSC 73 (73)
T ss_pred CCC
Confidence 887
No 4
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.55 E-value=4.2e-15 Score=98.34 Aligned_cols=62 Identities=50% Similarity=1.112 Sum_probs=53.8
Q ss_pred cccchhhhhCCCCCCChhhHHHHHhhhccCccccccccccCCCCCcccCCcC-CHHHHhhhhhcCCC
Q 031445 35 MSPCLDYITGNSSRPSSSCCSELSNTVKSQPQCLCEVIKGGGSSASSLGINV-NQTQAMALPSACNV 100 (159)
Q Consensus 35 L~pCl~yvtg~~~~Ps~~CC~~l~~v~~~~~~CLC~~i~~~~~~~~~lg~~i-n~t~A~~LP~~Cgv 100 (159)
|.||++|++++...|++.||++++++.+.++.|+|+++++... .. .++ |.+++++||++||+
T Consensus 1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~---~~-~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGA---SL-LGLKNATRALALPAACGL 63 (63)
T ss_pred CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccc---cc-cCcccHHHHHhchHhcCC
Confidence 5799999998877899999999999998889999999998754 22 234 79999999999996
No 5
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.41 E-value=1.9e-13 Score=92.70 Aligned_cols=60 Identities=42% Similarity=0.791 Sum_probs=51.9
Q ss_pred CcccchhhhhCCCCCCChhhHHHHHhhhccCccccccccccCCCCCcccCCcCCHHHHhhhhhcCCCCCC
Q 031445 34 SMSPCLDYITGNSSRPSSSCCSELSNTVKSQPQCLCEVIKGGGSSASSLGINVNQTQAMALPSACNVQTP 103 (159)
Q Consensus 34 ~L~pCl~yvtg~~~~Ps~~CC~~l~~v~~~~~~CLC~~i~~~~~~~~~lg~~in~t~A~~LP~~Cgv~~p 103 (159)
+|.+|++|++++ ..||++||+.|++ +..|||+|++++. ++..||.++|++|+++||+++|
T Consensus 5 ~L~~C~~ai~~~-~~Ps~~CC~~Lk~----~~~CLC~y~~~p~-----l~~~i~~~~A~~l~~~Cgv~~P 64 (66)
T cd01959 5 QLSPCLPAILGG-SPPSAACCAKLKE----QQSCLCQYAKNPS-----LKQYVNSPNARKVLAACGVPYP 64 (66)
T ss_pred hcccCHHHHhCC-CCCCHHHHHHHhc----CCCCeeeeecCcc-----HHhhcCcHHHHHHHHHcCCCCC
Confidence 789999999976 5799999999997 4489999998763 3445899999999999999986
No 6
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.16 E-value=5.3e-11 Score=79.71 Aligned_cols=75 Identities=39% Similarity=0.831 Sum_probs=59.2
Q ss_pred chhhhcCcccchhhhhCC--CCCCChhhHHHHHhhhccCccccccccccCCCCCcccCC--cCCHHHHhhhhhcCCCCCC
Q 031445 28 CNNVLISMSPCLDYITGN--SSRPSSSCCSELSNTVKSQPQCLCEVIKGGGSSASSLGI--NVNQTQAMALPSACNVQTP 103 (159)
Q Consensus 28 C~~~l~~L~pCl~yvtg~--~~~Ps~~CC~~l~~v~~~~~~CLC~~i~~~~~~~~~lg~--~in~t~A~~LP~~Cgv~~p 103 (159)
|...+..+.+|++|+++. ...|+.+||++++++. +..|+|..++.... .... .++..++.+||+.||+..+
T Consensus 1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~---~~~~~~~~~~~~a~~lp~~C~~~~~ 75 (79)
T smart00499 1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVL---GILEIPGVNAQNAASLPSACGVPPP 75 (79)
T ss_pred ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccc---cccchhhhhHHHHHhhHHhcCCCCC
Confidence 666777788999999987 4679999999999975 77899999887543 1111 2599999999999999976
Q ss_pred CCCCC
Q 031445 104 PVSRC 108 (159)
Q Consensus 104 p~s~C 108 (159)
+ +.|
T Consensus 76 ~-~~C 79 (79)
T smart00499 76 Y-TDC 79 (79)
T ss_pred C-CCC
Confidence 4 455
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=98.85 E-value=9.2e-11 Score=82.23 Aligned_cols=69 Identities=38% Similarity=0.866 Sum_probs=55.6
Q ss_pred cCcccchhhhhCCCCCCChhhHHHHHhhhccCccccccccccCCCCCccc---------CCcCCHHHHhhhhhcCCCCCC
Q 031445 33 ISMSPCLDYITGNSSRPSSSCCSELSNTVKSQPQCLCEVIKGGGSSASSL---------GINVNQTQAMALPSACNVQTP 103 (159)
Q Consensus 33 ~~L~pCl~yvtg~~~~Ps~~CC~~l~~v~~~~~~CLC~~i~~~~~~~~~l---------g~~in~t~A~~LP~~Cgv~~p 103 (159)
..+.+|.+|++++...|+..||++|+++ ++.|.|..++.... .. ...++..+|..||+.||+..+
T Consensus 13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~---~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~ 86 (90)
T PF00234_consen 13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVR---QVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPP 86 (90)
T ss_dssp SHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHH---HSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSS
T ss_pred ccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHH---hhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCC
Confidence 4588999999988778999999999997 77999999886532 10 126889999999999999987
Q ss_pred CCCCC
Q 031445 104 PVSRC 108 (159)
Q Consensus 104 p~s~C 108 (159)
+ ++|
T Consensus 87 ~-~~C 90 (90)
T PF00234_consen 87 Y-TDC 90 (90)
T ss_dssp S-S-G
T ss_pred C-CCC
Confidence 5 455
No 8
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=97.06 E-value=0.00027 Score=50.22 Aligned_cols=77 Identities=30% Similarity=0.588 Sum_probs=53.6
Q ss_pred chhhhcCcccchhhhh----CCCCCCChhhHHHHHhhhccCc-cccccccccCCCCCcccC-CcCCHHHHh-hhhhcCCC
Q 031445 28 CNNVLISMSPCLDYIT----GNSSRPSSSCCSELSNTVKSQP-QCLCEVIKGGGSSASSLG-INVNQTQAM-ALPSACNV 100 (159)
Q Consensus 28 C~~~l~~L~pCl~yvt----g~~~~Ps~~CC~~l~~v~~~~~-~CLC~~i~~~~~~~~~lg-~~in~t~A~-~LP~~Cgv 100 (159)
|.....+|--|.+.+. .-+..+.++||.-++.+.+.+. .|||..++... +| +++|....+ .|-+.||-
T Consensus 2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~v-----lg~i~~~ipv~l~~lln~CGk 76 (85)
T PF14547_consen 2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANV-----LGLINVNIPVALNLLLNACGK 76 (85)
T ss_pred CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhc-----ccccccccccHHHHHHHHhCC
Confidence 5444556777888771 1123478999999999876554 79999988753 45 454444444 56688999
Q ss_pred CCCCCCCCC
Q 031445 101 QTPPVSRCN 109 (159)
Q Consensus 101 ~~pp~s~C~ 109 (159)
+.|+.++|.
T Consensus 77 ~~p~gf~C~ 85 (85)
T PF14547_consen 77 TVPSGFTCP 85 (85)
T ss_pred cCcCCCcCC
Confidence 998888884
No 9
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=96.36 E-value=0.0034 Score=44.61 Aligned_cols=77 Identities=25% Similarity=0.590 Sum_probs=54.2
Q ss_pred CchhhhcCcccchhhhhCC----CCCCChhhHHHHHhhhccCc-cccccccccCCCCCcccCCcCCHHHHhhhh-hcCCC
Q 031445 27 DCNNVLISMSPCLDYITGN----SSRPSSSCCSELSNTVKSQP-QCLCEVIKGGGSSASSLGINVNQTQAMALP-SACNV 100 (159)
Q Consensus 27 ~C~~~l~~L~pCl~yvtg~----~~~Ps~~CC~~l~~v~~~~~-~CLC~~i~~~~~~~~~lg~~in~t~A~~LP-~~Cgv 100 (159)
.|..+..+|--|.+-+..- ...|.++||.-++.+.+-+. .|||..++.. .+|+++|....+++- +.||-
T Consensus 3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan-----~lgi~~~~pv~l~llln~CGk 77 (85)
T cd01958 3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN-----ILGISINIPVALSLLLNSCGR 77 (85)
T ss_pred CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc-----ccCcccccChhHHHHHHHHcC
Confidence 4555555666777766321 23677999999998876543 8999999875 356666666666444 67999
Q ss_pred CCCCCCCC
Q 031445 101 QTPPVSRC 108 (159)
Q Consensus 101 ~~pp~s~C 108 (159)
..|+.++|
T Consensus 78 ~~P~gf~C 85 (85)
T cd01958 78 NVPPGFTC 85 (85)
T ss_pred cCCCCCcC
Confidence 99888877
No 10
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=86.37 E-value=0.48 Score=34.05 Aligned_cols=71 Identities=25% Similarity=0.579 Sum_probs=44.6
Q ss_pred CcccchhhhhCCCC--------------CCChhhHHHHHhhhccCccccccccccCCCCCc-ccC----------CcCCH
Q 031445 34 SMSPCLDYITGNSS--------------RPSSSCCSELSNTVKSQPQCLCEVIKGGGSSAS-SLG----------INVNQ 88 (159)
Q Consensus 34 ~L~pCl~yvtg~~~--------------~Ps~~CC~~l~~v~~~~~~CLC~~i~~~~~~~~-~lg----------~~in~ 88 (159)
.|.+|..|+.-... ..-..||..|+.+ ++.|.|..|........ ..+ ...-.
T Consensus 14 ~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i---~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (110)
T cd00261 14 PLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI---PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMR 90 (110)
T ss_pred cCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC---cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHH
Confidence 57789999864311 1247899999986 57899998853211000 000 11234
Q ss_pred HHHhhhhhcCCCCCCCCCCCC
Q 031445 89 TQAMALPSACNVQTPPVSRCN 109 (159)
Q Consensus 89 t~A~~LP~~Cgv~~pp~s~C~ 109 (159)
..|..||..||+..+ ..|.
T Consensus 91 ~~a~~Lp~~C~~~~~--~~C~ 109 (110)
T cd00261 91 QAAQNLPSMCNLYPP--PYCP 109 (110)
T ss_pred HHHHhhchhcCCCCC--CCCC
Confidence 578899999999862 3574
No 11
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=34.53 E-value=25 Score=25.22 Aligned_cols=20 Identities=15% Similarity=0.172 Sum_probs=9.8
Q ss_pred chhhHHHHHHHHHHhhcccc
Q 031445 2 RLQTVLIAVIVAAAFCGGDV 21 (159)
Q Consensus 2 ~~~~~~~~~~~~a~~~~~a~ 21 (159)
|..+.|.|++++.|++++.+
T Consensus 4 K~~llL~l~LA~lLlisSev 23 (95)
T PF07172_consen 4 KAFLLLGLLLAALLLISSEV 23 (95)
T ss_pred hHHHHHHHHHHHHHHHHhhh
Confidence 44555555554444444443
Done!