BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031446
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94091|LIP1_CANAX Lipase 1 OS=Candida albicans GN=LIP1 PE=3 SV=2
Length = 468
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 90 LVNQHLYKALKGSDFQILDITHMSEFRADAHPSTAGGKKHNDCMHWCLPGITDTWNDLFV 149
L+N H+ + + G+ I + E R D P G KK + ++ P I+D+ + +F
Sbjct: 377 LLNGHITETIVGAPAAITWL----EARFDGEPVVKGCKKTSRITNFSYPNISDSTSSIFE 432
Query: 150 TLLNNV 155
+LN+V
Sbjct: 433 GILNSV 438
>sp|O42650|RIO1_SCHPO Serine/threonine-protein kinase rio1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rio1 PE=3 SV=2
Length = 497
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 65 LQPLLPEQVEELFSVQNNGTNVEARLVNQHLYKALKGSDFQILDITHMSEFRAD 118
L+ +P ++E++ + + V A VN +YK L +DFQ LD+ ++ + D
Sbjct: 359 LKTYVPRTLDEVYDIDRDTEIVNAGGVNSLVYKHLLNTDFQKLDLNDTTKNQND 412
>sp|Q9UPR6|ZFR2_HUMAN Zinc finger RNA-binding protein 2 OS=Homo sapiens GN=ZFR2 PE=2 SV=3
Length = 939
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 52 EGGDWDQGGSCQRLQPLLPEQVEELFSVQNNGTNVEARLVNQHLYKALKGSDFQILDITH 111
+GG + C QP+ PE VEE+FS + +L + + L D + H
Sbjct: 434 QGGSKEAPAGCSDAQPVGPEYVEEVFSDEGRVLRFHCKLC-ECSFNDLNAKDLHVRGRRH 492
Query: 112 MSEFRADAHP 121
++R +P
Sbjct: 493 RLQYRKKVNP 502
>sp|Q975P6|RGYR2_SULTO Reverse gyrase 2 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=rgy2 PE=3 SV=2
Length = 1233
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Query: 69 LPEQVEELFSVQNNGTNVEARLV----------NQHLYKALKGSDFQILDITH 111
L +Q + S+ +N TN+E +L+ Q LYKAL DF I T+
Sbjct: 139 LVKQAVDRISMYSNKTNIETKLLYYHSGINESQKQELYKALNAGDFNIFIATN 191
>sp|Q6ZN16|M3K15_HUMAN Mitogen-activated protein kinase kinase kinase 15 OS=Homo sapiens
GN=MAP3K15 PE=1 SV=2
Length = 1313
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 5 EKDKPVIPPVQPNVGLDMVLKH--MIQYVEKTARRGSIKLFRTQSP 48
E+D P+ + L LKH ++QY+ + G IK+F Q P
Sbjct: 685 ERDSRYSQPLHEEIALHKYLKHRNIVQYLGSVSENGYIKIFMEQVP 730
>sp|Q39XY0|RS4_GEOMG 30S ribosomal protein S4 OS=Geobacter metallireducens (strain GS-15
/ ATCC 53774 / DSM 7210) GN=rpsD PE=3 SV=1
Length = 208
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 12 PPVQPNVGLDMVLKHMIQYVEKTARRGSIKLFRTQSPRHFEGGDWDQGGSCQRLQPLLPE 71
PP Q G V + IQ EK R + Q +FE D +G + + L LL
Sbjct: 39 PPGQHGQGRPKVSNYGIQLREKQKVRRIYGVLEKQFRSYFEEADRMRGVTGENLLSLLER 98
Query: 72 QVEE-LFSVQNNGTNVEARLVNQHLYKALKGSDFQILDI 109
+++ ++ + + EAR++ +H + L G I I
Sbjct: 99 RLDNVVYRLGFASSRTEARILVRHNHFTLNGRKANIPSI 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,145,615
Number of Sequences: 539616
Number of extensions: 2473555
Number of successful extensions: 5161
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5158
Number of HSP's gapped (non-prelim): 13
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)