BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031448
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 20 RFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVD 79
++ C+ H Y+ + GPSM PT+ D++ AE +S + GDIV +SP D
Sbjct: 18 QYGCIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSD 76
Query: 80 PNKIVTKRIVGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYG 139
P + KR++G+EGD++ P + H+ V P GHVW++GDNL S DSR +GP+PYG
Sbjct: 77 PKSNICKRVIGLEGDKILTTSPSDFFKSHSYV-PMGHVWLEGDNLQNSTDSRCYGPIPYG 135
Query: 140 LIEGKAFFRVWPPNSFGSL 158
LI G+ FF++WP + FG L
Sbjct: 136 LIRGRIFFKIWPLSDFGFL 154
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 5 GLLAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVG 64
G+L K T ++ C+ H Y+ + GPSM PT+ D++ AE +S
Sbjct: 4 GVLGKAFRLAGYTI-QYGCIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFY 61
Query: 65 RLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNL 124
+ GDIV +SP DP + KR++G+EGD++ P + + V P GHVW++GDNL
Sbjct: 62 GIQRGDIVIAKSPSDPKSNICKRVIGLEGDKILSTSPSDVFKSRSYV-PTGHVWLEGDNL 120
Query: 125 YASRDSRQFGPVPYGLIEGKAFFRVWPPNSFGSL 158
S DSR +GP+PYGLI G+ FF++WP + FG L
Sbjct: 121 QNSTDSRYYGPIPYGLIRGRIFFKIWPFSDFGFL 154
>sp|Q28I39|IMP1L_XENTR Mitochondrial inner membrane protease subunit 1 OS=Xenopus
tropicalis GN=immp1l PE=2 SV=1
Length = 167
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 20 RFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVD 79
++ C+ H Y+ + GPSM PT+ DV+L + +S + GDI+ +SP
Sbjct: 18 QYGCIAHCAFEYIGEVVICSGPSMEPTIR-NYDVLLCDNLSRHFFSIHKGDIIVAKSPDK 76
Query: 80 PNKIVTKRIVGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYG 139
P+ + KR++G+EGD+V P HT V PKGHVW++GDNL S DSR +GPVPY
Sbjct: 77 PSVNICKRVIGLEGDKVCMSSPSALLKRHTYV-PKGHVWLEGDNLDNSTDSRSYGPVPYA 135
Query: 140 LIEGKAFFRVWPPNSFGSL 158
LI G+ RVWP SFG L
Sbjct: 136 LIRGRICLRVWPLESFGPL 154
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 16 LTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGR-LGPGDIVFV 74
+ + H + YL+ + GPSM+PTLN G+ +L + + R R GD+V
Sbjct: 9 IAVVQIAAFVHQIHEYLFQVQMTSGPSMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVS 68
Query: 75 RSPVDPNKIVTKRIVGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFG 134
P D + V KRI+G+ GD + Y P + + + +P GHVW+ GDN+ S DSR +G
Sbjct: 69 AKPSDSKQHVCKRIIGMPGDTI-YVDPTSSNK--KITIPLGHVWLAGDNIAHSLDSRNYG 125
Query: 135 PVPYGLIEGKAFFRVWP 151
PVP GLI+ K RVWP
Sbjct: 126 PVPMGLIKAKVIARVWP 142
>sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2 OS=Danio rerio
GN=immp2l PE=2 SV=1
Length = 183
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 38 VFGPSMLPTLNLTG----DVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEG 93
V G SM P+LN G DV+L S R + GDIV V SP +P + + KR++G+EG
Sbjct: 38 VEGASMQPSLNPDGESSPDVVLLNRWSVRNYHVQRGDIVSVLSPKNPQQKIIKRVIGIEG 97
Query: 94 DRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPPN 153
D + +N V VP GH+WI+GD+ S DS FGPV GL+ G+A +WPP+
Sbjct: 98 DFIKTLGYKN----RYVRVPDGHLWIEGDHHGHSFDSNAFGPVSLGLVHGRASHIIWPPS 153
Query: 154 SF 155
+
Sbjct: 154 RW 155
>sp|P46972|IMP2_YEAST Mitochondrial inner membrane protease subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2 PE=1
SV=1
Length = 177
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 8 AKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYV------SH 61
+K L TL + + N+ + V G SM PTLN + + ++V
Sbjct: 7 SKRFLRNTLIAISWVPVLLTINNNVVHIAQVKGTSMQPTLNPQTETLATDWVLLWKFGVK 66
Query: 62 RVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVT----YFKPRNGDSCHTVVVPKGHV 117
L DI+ ++P +P K+ KR+ G+ D + Y KP+ V +P+GH+
Sbjct: 67 NPSNLSRDDIILFKAPTNPRKVYCKRVKGLPFDTIDTKFPYPKPQ-------VNLPRGHI 119
Query: 118 WIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPPNSFGS 157
W++GDN + S DS FGP+ GL+ GKA VWPP+ +G+
Sbjct: 120 WVEGDNYFHSIDSNTFGPISSGLVIGKAITIVWPPSRWGT 159
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 38 VFGPSMLPTLNLTG----DVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEG 93
V G SM P+LN G DV+L + R + GDIV + SP +P + + KR++ +EG
Sbjct: 39 VEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEG 98
Query: 94 DRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPPN 153
D V +N V VP+GH+W++GD+ S DS FGPV GL+ A +WPP
Sbjct: 99 DIVKTMGHKN----RYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPK 154
Query: 154 SFGSL 158
+ L
Sbjct: 155 RWQKL 159
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 38 VFGPSMLPTLNLTG----DVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEG 93
V G SM P+LN G DV+L + R + GDIV + SP +P + + KR++ +EG
Sbjct: 39 VEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEG 98
Query: 94 DRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPPN 153
D V +N V VP+GH+W++GD+ S DS FGPV GL+ A +WPP
Sbjct: 99 DIVRTIGHKN----RYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPE 154
Query: 154 SFGSL 158
+ L
Sbjct: 155 RWQKL 159
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 38 VFGPSMLPTLNLTG----DVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEG 93
V G SM P+LN G DV+L + R + GDIV + SP +P + + KR++ +EG
Sbjct: 39 VEGSSMQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEG 98
Query: 94 DRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPPN 153
D V +N V VP+GH+W++GD+ S DS FGPV GL+ A +WPP
Sbjct: 99 DIVRTIGHKN----RLVKVPRGHMWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPE 154
Query: 154 SFGSL 158
+ L
Sbjct: 155 RWQRL 159
>sp|P28627|IMP1_YEAST Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP1 PE=1
SV=3
Length = 190
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 13 TQTLTFA-RFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVI--LAEYVSHRVGRLGPG 69
++T ++A R C H+ + Y + T G SMLPTL+ T D + L + + R ++G
Sbjct: 10 SKTFSYAIRSLCFLHIIHMYAYEFTETRGESMLPTLSATNDYVHVLKNFQNGRGIKMG-- 67
Query: 70 DIVFVRSPVDPNKIVTKRIVGVEGDRV----TYFKPRNGDSC-------HTVVVPKGHVW 118
D + P DPN + KR+ G+ GD V + GD + VP+GHVW
Sbjct: 68 DCIVALKPTDPNHRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTYIKVPEGHVW 127
Query: 119 IQGDNLYASRDSRQFGPVPYGLIEGK 144
+ GDNL S DSR + +P GLI GK
Sbjct: 128 VTGDNLSHSLDSRTYNALPMGLIMGK 153
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 38 VFGPSMLPTLNLTG----DVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEG 93
V G SM P+LN D++L R + GDIV + SP +P + + KR++ +EG
Sbjct: 36 VEGVSMQPSLNPDARGESDIVLLNRWRARNYDVQRGDIVSLVSPKNPEQKIIKRVIALEG 95
Query: 94 DRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPPN 153
D V +N V VP+GHVW++GD+ S DS FGPV GL+ A +WPPN
Sbjct: 96 DIVKTLGHKN----RYVKVPRGHVWVEGDHHGHSFDSNAFGPVSLGLLHSHATHILWPPN 151
Query: 154 SFGSL 158
+ L
Sbjct: 152 RWQKL 156
>sp|Q9UST2|IMP2L_SCHPO Mitochondrial inner membrane protease subunit 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC336.13c PE=3 SV=1
Length = 180
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 32 LWSPTLVF------------GPSMLPTLN-----LTGDVILAEYVSHRVGRLGPGDIVFV 74
LW P L+F G SM P N L D +L + R GD+V +
Sbjct: 24 LWVPVLMFVEQHVVSVGTIEGRSMKPAFNPETNMLQRDRVLLWKWNKDYKR---GDVVIL 80
Query: 75 RSPVDPNKIVTKRIVGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFG 134
RSP +P +++ KR++GVE D K R V VP+GHVW++GD + S DS +FG
Sbjct: 81 RSPENPEELLVKRVLGVEYD---IMKTRPPKKLSLVPVPEGHVWVEGDEQFHSIDSNKFG 137
Query: 135 PVPYGLIEGKAFFRVWPPNSFGSL 158
PV GLI K ++P + G +
Sbjct: 138 PVSTGLITAKVIAILFPFSRAGRI 161
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 7 LAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRL 66
+ KE L ++ A F + + ++ +P + G SM PTL G+ + V ++ G L
Sbjct: 1 MKKEILEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIVGYKTGGL 59
Query: 67 GPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------------------FKPRNGD- 105
G++V + + N KR++GV GD+V Y K + GD
Sbjct: 60 EKGNVVVFHA--NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY 117
Query: 106 -------------SCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPP 152
+ + V+PKG + GDN S+DSR FG + I GK FR WP
Sbjct: 118 ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF 177
Query: 153 NSF 155
+ F
Sbjct: 178 SEF 180
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 7 LAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRL 66
+ KE L ++ A F + + ++ +P + G SM PTL G+ + + ++ G L
Sbjct: 1 MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGL 59
Query: 67 GPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------------------FKPRNGD- 105
G++V + + N KR++GV GD+V Y K + GD
Sbjct: 60 EKGNVVVFHA--NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY 117
Query: 106 -------------SCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPP 152
+ + V+PKG + GDN S+DSR FG + I GK FR WP
Sbjct: 118 ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF 177
Query: 153 NSF 155
+ F
Sbjct: 178 SEF 180
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 7 LAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRL 66
+ KE L ++ A F + + ++ +P + G SM PTL G+ + + ++ G L
Sbjct: 1 MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGL 59
Query: 67 GPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------------------FKPRNGD- 105
G++V + + N KR++GV GD+V Y K + GD
Sbjct: 60 EKGNVVVFHA--NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY 117
Query: 106 -------------SCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPP 152
+ + V+PKG + GDN S+DSR FG + I GK FR WP
Sbjct: 118 ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF 177
Query: 153 NSF 155
+ F
Sbjct: 178 SEF 180
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 7 LAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRL 66
+ KE L ++ A F + + ++ +P + G SM PTL G+ + + ++ G L
Sbjct: 1 MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGL 59
Query: 67 GPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------------------FKPRNGD- 105
G++V + + N KR++GV GD+V Y K + GD
Sbjct: 60 EKGNVVVFHA--NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY 117
Query: 106 -------------SCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPP 152
+ + V+PKG + GDN S+DSR FG + I GK FR WP
Sbjct: 118 ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF 177
Query: 153 NSF 155
+ F
Sbjct: 178 SEF 180
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 7 LAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRL 66
+ KE L ++ A F + + ++ +P + G SM PTL G+ + + ++ G L
Sbjct: 1 MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGL 59
Query: 67 GPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------------------FKPRNGD- 105
G++V + + N KR++GV GD+V Y K + GD
Sbjct: 60 EKGNVVVFHA--NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY 117
Query: 106 -------------SCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPP 152
+ + V+PKG + GDN S+DSR FG + I GK FR WP
Sbjct: 118 ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF 177
Query: 153 NSF 155
+ F
Sbjct: 178 SEF 180
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 7 LAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRL 66
+ KE L ++ A F + + ++ +P + G SM PTL G+ + + ++ G L
Sbjct: 1 MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGL 59
Query: 67 GPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------------------FKPRNGD- 105
G++V + + N KR++GV GD+V Y K + GD
Sbjct: 60 EKGNVVVFHA--NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY 117
Query: 106 -------------SCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPP 152
+ + V+PKG + GDN S+DSR FG + I GK FR WP
Sbjct: 118 ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF 177
Query: 153 NSF 155
+ F
Sbjct: 178 SEF 180
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 7 LAKEALTQTLTFARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRL 66
+ KE L ++ A F + + ++ +P + G SM PTL G+ + + ++ G L
Sbjct: 1 MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGL 59
Query: 67 GPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------------------FKPRNGD- 105
G++V + + N KR++GV GD+V Y K + GD
Sbjct: 60 EKGNVVVFHA--NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDY 117
Query: 106 -------------SCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPP 152
+ + V+PKG + GDN S+DSR FG + I GK FR WP
Sbjct: 118 ITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPF 177
Query: 153 NSF 155
+ F
Sbjct: 178 SEF 180
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 32 LWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSP----------VDPN 81
L P + SM PTL+ GD ++AE VS+ + DIV ++P N
Sbjct: 174 LAEPKSIPSTSMYPTLD-KGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSN 232
Query: 82 KIVTKRIVGVEGDRVTYFKPRNGD-------------------SCHTVVVPKGHVWIQGD 122
+ KRIV EGD + + R+G + VPKG+V++ GD
Sbjct: 233 DVFIKRIVASEGD---WVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGD 289
Query: 123 NLYASRDSRQFGPVPYGLIEGKAFFRVWPPN 153
N S DS +GP+P I G++ FR WPP+
Sbjct: 290 NRNKSFDSHNWGPLPIENIVGRSVFRYWPPS 320
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 24/150 (16%)
Query: 32 LWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSP-------VDPNKIV 84
L P + SMLPTL++ GD ++AE VS+ + DIV ++P +
Sbjct: 204 LAEPKSIPSTSMLPTLDV-GDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVF 262
Query: 85 TKRIVGVEGD--RVTYFKPRNGDSCHT--------------VVVPKGHVWIQGDNLYASR 128
KRIV EGD V K D+ + VP+G+V++ GDN S
Sbjct: 263 IKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSF 322
Query: 129 DSRQFGPVPYGLIEGKAFFRVWPPNSFGSL 158
DS +GP+P I G++ FR WPP+ +
Sbjct: 323 DSHNWGPLPIKNIIGRSVFRYWPPSKVSDI 352
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 30 HYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSP-------VDPNK 82
+++ P + SM PT ++ GD ++AE VS+ + DIV +SP
Sbjct: 130 YFIAEPRYIPSLSMYPTFDV-GDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDAD 188
Query: 83 IVTKRIVGVEGDRVTYFK--------PRN--------GDSCHTVVVPKGHVWIQGDNLYA 126
+ KRIV EGD V RN G + VP+ V++ GDN
Sbjct: 189 VFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNN 248
Query: 127 SRDSRQFGPVPYGLIEGKAFFRVWPPN 153
S DS +GP+P I G++ FR WPPN
Sbjct: 249 SYDSHVWGPLPLKNIIGRSVFRYWPPN 275
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 33/164 (20%)
Query: 23 CLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNK 82
C+ +++S +V G SM+PTL +G++++ +S+ +G + DI+ + + +
Sbjct: 19 CVVATLRLFVFSNYVVEGKSMMPTLE-SGNLLIVNKLSYDIGPIRRFDIIVFHA--NKKE 75
Query: 83 IVTKRIVGVEGDRVTY-------------------FKPR------NGDSCHTVV-----V 112
KR++G+ GDR+ Y +K + GD V V
Sbjct: 76 DYVKRVIGLPGDRIAYKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFTLEEVTGKTRV 135
Query: 113 PKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVWPPNSFG 156
P G +++ GDN +S DSR FG V I GK FR WP F
Sbjct: 136 PPGCIFVLGDNRLSSWDSRHFGFVKINQIVGKVDFRYWPFKQFA 179
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 74/207 (35%), Gaps = 75/207 (36%)
Query: 24 LFHVTNHYLWSPTLVFGPSMLPTLN----LTGDVILAEYVSHRVGRLGPGDIVFVRSPV- 78
L++V ++ P L+ SM PTL+ GD I+ + +S+R G PGD++ R P
Sbjct: 78 LYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDVIVFRGPPS 137
Query: 79 ------------------------------DPNKIVTKRIVGVEGDRVT----------- 97
D N +V KR++ V G V
Sbjct: 138 WNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLV-KRVIAVGGQTVQCRSDTGLTVNG 196
Query: 98 ------YFKPRN-----------GDSCHTVVVPKGHVWIQGDNLYASRDSRQFGP----- 135
Y P G V VP G VW+ GDN S DSR P
Sbjct: 197 RPLKEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTD 256
Query: 136 ------VPYGLIEGKAFFRVWPPNSFG 156
VP + GKA VWPP+ +G
Sbjct: 257 DPLPGTVPVANVIGKARLIVWPPSRWG 283
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 24/152 (15%)
Query: 31 YLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSP-------VDPNKI 83
++ P + SMLPTL GD ++ E VS+ GDI+ P D +
Sbjct: 33 FVAEPRYIPSDSMLPTLE-QGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQA 91
Query: 84 VTKRIVGVEGDRVTYFKP---RNGDSCH-------------TVVVPKGHVWIQGDNLYAS 127
KR++ + G V R+G V VP G V++ GDN S
Sbjct: 92 FIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNNS 151
Query: 128 RDSRQFGPVPYGLIEGKAFFRVWPPNSFGSLG 159
DS +G +P I G A FR +P + +G LG
Sbjct: 152 NDSHVWGFLPQQNIIGHALFRFFPASRWGQLG 183
>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
GN=lepB PE=3 SV=1
Length = 289
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 76/216 (35%), Gaps = 80/216 (37%)
Query: 24 LFHVTNHYLWSPTLVFGPSMLPTLN----LTGDVILAEYVSHRVGRLGPGDIVFVRSP-- 77
L++V ++ P L+ SM PTL+ GD I+ + +++R PGD++ + P
Sbjct: 66 LYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPS 125
Query: 78 -------VDPNKIV---------------------TKRIVGVEGDRVT------------ 97
+ N IV KR++ V G V
Sbjct: 126 WNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGK 185
Query: 98 ----------------YFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSR---------- 131
F P G V VP+G +W+ GDN S DSR
Sbjct: 186 PLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVN 245
Query: 132 --------QFGPVPYGLIEGKAFFRVWPPNSFGSLG 159
G VP + GKA VWPP+ +G +G
Sbjct: 246 GLSCTGDPNSGTVPVSNVIGKARVVVWPPSRWGGVG 281
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 61/153 (39%), Gaps = 29/153 (18%)
Query: 30 HYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIV 89
H+L+ P LV G SM PTL+ G+ + + +G L GDIV + V KR++
Sbjct: 39 HFLFEPYLVEGSSMYPTLH-DGERLFVNKTVNYIGELKRGDIVIINGETSKIHYV-KRLI 96
Query: 90 GVEGDRVTY---------------FKPRNGDSCHT-----------VVVPKGHVWIQGDN 123
G G+ V + +N V VPKG ++ GDN
Sbjct: 97 GKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVSLTGDFGPVKVPKGKYFVMGDN 156
Query: 124 LYASRDSRQ-FGPVPYGLIEGKAFFRVWPPNSF 155
S DSR G + I G + F +P N
Sbjct: 157 RLNSMDSRNGLGLIAEDRIVGTSKFVFFPFNEM 189
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 33/129 (25%)
Query: 38 VFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVT 97
V G SM PT G+ +L SHR + DIV + P +K++ KR++G+ G+ +
Sbjct: 30 VEGVSMNPTFQ-EGNELLVNKFSHRFKTIHRFDIVLFKGP--DHKVLIKRVIGLPGETIK 86
Query: 98 YFKPR---NG---------------------------DSCHTVVVPKGHVWIQGDNLYAS 127
Y + NG D T VPKG ++ GDN S
Sbjct: 87 YKDDQLYVNGKQVAEPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVVGDNRIYS 146
Query: 128 RDSRQFGPV 136
DSR FGP+
Sbjct: 147 FDSRHFGPI 155
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 17 TFARFFCLF---HVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSH------------ 61
+ A FF +F + +++ P + SM+PTL L GD IL E S+
Sbjct: 60 SLASFFPIFLAIFIIRSFIYEPFQIPSGSMMPTL-LVGDFILVEKFSYGIKEPITHKILI 118
Query: 62 RVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY 98
R + GDI + P D N KRI+G+ GD++ Y
Sbjct: 119 RTKKPNRGDIAVFQHPTDHNINYIKRIIGLPGDKIRY 155
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 90 GVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRV 149
++ + YF+ +N T +VPKG ++ GDN S DSR +G VP + GKA ++
Sbjct: 233 SIKNTKENYFQQKNMPKL-TWIVPKGEYFMMGDNRDNSLDSRYWGFVPEKNLVGKA-IKI 290
Query: 150 W 150
W
Sbjct: 291 W 291
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVT------KRIVGVEGDR 95
SM PTL + D ++ E +S+R+ G+IV V +P D K KRI+G+ GD
Sbjct: 52 SMEPTLQI-NDRLIIEKISYRLRDPERGEIV-VFNPTDALKAKNFHDAFIKRIIGLPGDE 109
Query: 96 V------TYFKPRNGDSCHT----------VVVPKGHVWIQGDNLYASRDSRQFGPVPYG 139
V Y + D + V VP + GDN S DS +G VP
Sbjct: 110 VRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPRE 169
Query: 140 LIEGKAFFRVWP 151
+ G+AF R WP
Sbjct: 170 KLLGRAFVRFWP 181
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 31/157 (19%)
Query: 23 CLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNK 82
L + H+L+ P LV G SM PTL+ G+ + + +G + GDIV + D +K
Sbjct: 32 ALALLIRHFLFEPYLVEGSSMYPTLH-DGERLFVNKSVNYIGEIERGDIVIING--DTSK 88
Query: 83 I-VTKRIVGVEGDRVT----------------YFKPRNGDSCHT----------VVVPKG 115
+ KR++G G+ V Y ++ V VPKG
Sbjct: 89 VHYVKRLIGKPGETVEMKNDTLYINGKKIAEPYLASNKKEAKKLGVNLTGDFGPVKVPKG 148
Query: 116 HVWIQGDNLYASRDSRQ-FGPVPYGLIEGKAFFRVWP 151
++ GDN S DSR G + I G + F +P
Sbjct: 149 KYFVMGDNRLNSMDSRNGLGLIAENRIVGTSKFVFFP 185
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 22 FCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSH------------RVGRLGPG 69
+ + +L+ P + SM+PTL L GD IL E ++ G G
Sbjct: 71 LAIVLIVRSFLYEPFQIPSGSMMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRG 129
Query: 70 DIVFVRSPVDPNKIVTKRIVGVEGDRVTY 98
DIV + P DP KR VG+ GD++TY
Sbjct: 130 DIVVFKYPEDPKLDYIKRAVGLPGDKITY 158
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 84 VTKRI--VGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLI 141
VT RI V + D++ + + G T VVP G ++ GDN S DSR +G VP +
Sbjct: 234 VTHRILMVPIAQDQLGMYYQQPGQPLATWVVPPGQYFMMGDNRDNSADSRYWGFVPEANL 293
Query: 142 EGKA 145
GKA
Sbjct: 294 VGKA 297
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 22 FCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSH------------RVGRLGPG 69
+ + +L+ P + SM+PTL L GD IL E ++ G G
Sbjct: 71 LAIVLIVRSFLYEPFQIPSGSMMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRG 129
Query: 70 DIVFVRSPVDPNKIVTKRIVGVEGDRVTY 98
DIV + P DP KR VG+ GD++TY
Sbjct: 130 DIVVFKYPEDPKLDYIKRAVGLPGDKITY 158
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 84 VTKRI--VGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLI 141
VT RI V + D++ + + G T VVP G ++ GDN S DSR +G VP +
Sbjct: 234 VTHRILMVPIAQDQLGMYYQQPGQPLATWVVPPGQYFMMGDNRDNSADSRYWGFVPEANL 293
Query: 142 EGKA 145
GKA
Sbjct: 294 VGKA 297
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDP--------NKIVTKRIVGVEG 93
SMLPTL + D ++ E +S+ GDI+ V P + N+ KR++G+ G
Sbjct: 59 SMLPTLEVN-DRLIVEKISYHFNPPRRGDII-VFHPTEALKQQNPSLNEAFIKRVIGLPG 116
Query: 94 DRVTYFKPR---NGDSCHT--VVVPKGHVW-----------IQGDNLYASRDSRQFGPVP 137
+ V R NG + P + W + GDN S DS +G VP
Sbjct: 117 ETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVLGDNRNNSYDSHFWGYVP 176
Query: 138 YGLIEGKAFFRVWPPNSFGSLG 159
I G+A R WP N G LG
Sbjct: 177 RQNIIGRAVVRFWPVNRLGELG 198
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 76/213 (35%), Gaps = 71/213 (33%)
Query: 7 LAKEALTQTLTFARFFCLF--HVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSH--- 61
L KE L + F LF V +L P + SM PTL++ GD IL S+
Sbjct: 53 LNKEPLLVEYGKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDV-GDFILVNKFSYGIR 111
Query: 62 ---------RVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTYFKPR----NGDSCH 108
VG GD++ R P DPN KR+VG+ GD V Y + NG+S
Sbjct: 112 LPVIDKKVIEVGDPQRGDVMVFRYPSDPNVNYIKRVVGLPGDVVRYTSDKRLFINGESVA 171
Query: 109 TVV-----------------------------------------VPKGHVWIQGDNLYAS 127
+ VP GH ++ GDN S
Sbjct: 172 EKLLGAEPNTLGSAELYQEKLGAVEHEIRKEMSRYRAMPDGQWKVPAGHYFMMGDNRDNS 231
Query: 128 RDSRQ----------FGPVPYGLIEGKAFFRVW 150
DSR G VP I GKA F VW
Sbjct: 232 NDSRYWDDPNIPKDLLGMVPDENIVGKA-FAVW 263
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 22 FCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSH------------RVGRLGPG 69
+ + +++ P + SM+PTL L GD IL E ++ G G
Sbjct: 71 LAIVLIVRSFIYEPFQIPSGSMMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRG 129
Query: 70 DIVFVRSPVDPNKIVTKRIVGVEGDRVTY 98
DIV + P DP KR VG+ GD+VTY
Sbjct: 130 DIVVFKYPEDPKLDYIKRAVGLPGDKVTY 158
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 84 VTKRI--VGVEGDRVTYFKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLI 141
VT RI V + D+V + + G T +VP G ++ GDN S DSR +G VP +
Sbjct: 234 VTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANL 293
Query: 142 EGKA 145
G+A
Sbjct: 294 VGRA 297
>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
SV=1
Length = 256
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 107 CHTVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAF 146
C VVP+G+ ++ GDN S+DSR +G VP IEGKAF
Sbjct: 173 CVKFVVPEGYYFVMGDNRDNSQDSRFWGFVPRENIEGKAF 212
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 30 HYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIV 89
Y+ + SM PTL L GD IL + + + GD++ + P +P+ KRI+
Sbjct: 20 EYIAQAYTIPSASMEPTL-LVGDFILVNKLVYSLSEPMRGDMIVFKYPKNPDIDFIKRII 78
Query: 90 GVEGDRVTYF 99
GD V +F
Sbjct: 79 ARGGDTVEFF 88
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 59/151 (39%), Gaps = 29/151 (19%)
Query: 31 YLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVG 90
+L+ P LV G SM PTL+ G+ + VG GDIV + + N KR++G
Sbjct: 33 FLFEPYLVEGTSMDPTLH-DGERLFVYKTVRYVGEFKRGDIVIIDGD-EKNVHYVKRLIG 90
Query: 91 VEGDRVTY---------------FKPRNGDSCHTV-----------VVPKGHVWIQGDNL 124
+ GD V + N V VP+G ++ GDN
Sbjct: 91 LPGDTVQMKDDTLYINGKKVSEPYLSENRKEAEAVGVKLTGDFGPVKVPEGKYFVMGDNR 150
Query: 125 YASRDSRQ-FGPVPYGLIEGKAFFRVWPPNS 154
S DSR G + + G + F +P N
Sbjct: 151 QRSMDSRNGLGLIDKKRVAGTSQFVFFPFNE 181
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 78/223 (34%), Gaps = 72/223 (32%)
Query: 7 LAKEALTQTLTFARFFCLF--HVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSH--- 61
L KE L + F LF V +L P + SM PTL + GD IL ++
Sbjct: 53 LNKEPLLVEYGKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEV-GDFILVNKFAYGIR 111
Query: 62 ---------RVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTYFKPRN--------- 103
+G GD++ R P +PN KR+VG+ GD V Y K +
Sbjct: 112 LPVLDTKVIPIGDPQRGDVMVFRYPSEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVA 171
Query: 104 ---------------------GDSCHTV---------------VVPKGHVWIQGDNLYAS 127
G + H + +P GH ++ GDN S
Sbjct: 172 EKLVGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPAGHYFMMGDNRDNS 231
Query: 128 RDSRQ----------FGPVPYGLIEGKAF--FRVWPPNSFGSL 158
DSR G VP I GKAF + WP +L
Sbjct: 232 NDSRYWNDPKIPKDLLGMVPDRNIVGKAFAVWMSWPDPKMSNL 274
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 28/137 (20%)
Query: 22 FCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPN 81
L + +L+ P +V G SM PTL + + + ++V + G GDIV +
Sbjct: 23 LILVFLVRTFLFEPYIVQGESMKPTLFNSERLFVNKFVKY-TGDFKRGDIVVLNGEEKKT 81
Query: 82 KIVTKRIVGVEGDRVT----------------YFKPRNGDSCHT----------VVVPKG 115
V KR++G+ GD + Y K D+ + + VPK
Sbjct: 82 HYV-KRLIGLPGDTIEMKNDNLFVNGKRFNEEYLKENKKDAHDSDLNLTGDFGPIKVPKD 140
Query: 116 HVWIQGDNLYASRDSRQ 132
++ GDN S DSR
Sbjct: 141 KYFVMGDNRQNSMDSRN 157
>sp|O07344|LEP_STRPN Signal peptidase I OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=lepB PE=3 SV=2
Length = 204
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 90 GVEGDRVTYFKP-----------RNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPY 138
G EG++ T+F+ N ++ + VP+G + GD+ S DSR G
Sbjct: 125 GFEGNKGTFFRSIAQKAQAFTVDVNYNTNFSFTVPEGEYLLLGDDRLVSSDSRHVGTFKA 184
Query: 139 GLIEGKAFFRVWPPNSFGSL 158
I G+A FR+WP G+
Sbjct: 185 KDITGEAKFRLWPITRIGTF 204
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 31 YLWSPTLVFGPSMLPTLNLTGDVILAEYVSHR-VGRLGPGDIVFVRSPVDPNKIVTKRIV 89
+ WS V G SM PTL G+++ V H + R DIV V D NK + KR++
Sbjct: 27 FFWSNVRVEGHSMDPTL-ADGEILFV--VKHLPIDRF---DIV-VAHEEDGNKDIVKRVI 79
Query: 90 GVEGDRVTY 98
G+ GD + Y
Sbjct: 80 GMPGDTIRY 88
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 28/133 (21%)
Query: 17 TFARFF---CLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSHRVGRLGP----- 68
TFA FF + + ++ P + SM+PTL L GD IL + S+ G P
Sbjct: 54 TFASFFPILIIVFIIRTFICEPFQIPSESMMPTL-LPGDFILVKKFSY--GIKNPFSNNV 110
Query: 69 ---------GDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--------FKPRNGDSCHTVV 111
GDIV + P + KRIVG+ GD++ Y P N + HT
Sbjct: 111 IVFINTPKRGDIVVFKHPNNNAINYVKRIVGLPGDKINYNILTKRLTITPNNINEQHTKN 170
Query: 112 VPKGHVWIQGDNL 124
+ + +I+ ++
Sbjct: 171 ISINYKYIKPNDF 183
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 109 TVVVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVW 150
T +VPK ++ GDN S DSR +G VP + GK F +W
Sbjct: 247 TWIVPKHKYFVLGDNRDNSLDSRYWGFVPEKNLIGKVVF-IW 287
>sp|P59662|LEP_STRR6 Signal peptidase I OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=lepB PE=3 SV=1
Length = 204
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 90 GVEGDRVTYFKP-----------RNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVPY 138
G EG++ T+F+ N ++ + VP+G + GD+ S DSR G
Sbjct: 125 GFEGNKGTFFRSIAQKAQAFTVDVNYNTNFSFTVPEGEYLLLGDDRLVSSDSRHVGTFKA 184
Query: 139 GLIEGKAFFRVWPPNSFGSL 158
I G+A FR WP G+
Sbjct: 185 KDITGEAKFRFWPITRIGTF 204
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 31 YLWSPTLVFGPSMLPTLNLTGDVILAEYVSHR-VGRLGPGDIVFVRSPVDPNKIVTKRIV 89
+ WS V G SM PTL G+++ V H + R DIV V D NK + KR++
Sbjct: 27 FFWSNVRVEGHSMDPTL-ADGEILFV--VKHLPIDRF---DIV-VAHEEDGNKDIVKRVI 79
Query: 90 GVEGDRVTY 98
G+ GD + Y
Sbjct: 80 GMPGDTIRY 88
>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=lepB PE=3 SV=1
Length = 312
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 6 LLAKEALTQTLT--FARFFCLFHVTNHYLWSPTLVFGPSMLPTLNLTGDVILAEYVSH-- 61
L K+ ++L+ F FF +F + +++ P + SM+PTL L GD IL + S+
Sbjct: 51 LENKKCFFRSLSSLFPTFFIVF-IIRSFIYEPFQIPSGSMMPTL-LIGDFILVKKFSYGI 108
Query: 62 ----------RVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY 98
++ GDIV + P + N KR+VG+ GD++ Y
Sbjct: 109 KEPITNKTIIKMNLPQRGDIVVFKHPKN-NIDYIKRVVGLPGDKIQY 154
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 111 VVPKGHVWIQGDNLYASRDSRQFGPVPYGLIEGKAFFRVW 150
+VPK ++ GDN S DSR +G VP + GKA ++W
Sbjct: 251 IVPKNKYFMMGDNRDNSLDSRYWGFVPEENLLGKA-TKIW 289
>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
GN=spsA PE=3 SV=1
Length = 174
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 48/134 (35%), Gaps = 28/134 (20%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--- 98
M PTLN GD ++ + +L GDI+ R N+I T RI+ G + +
Sbjct: 35 DMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQG 90
Query: 99 ---------------------FKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVP 137
F RN ++P + + D DSRQFG +
Sbjct: 91 QLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDQDNNKHDSRQFGLID 150
Query: 138 YGLIEGKAFFRVWP 151
I G R +P
Sbjct: 151 KKDIIGNVSLRYYP 164
>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
GN=spsA PE=3 SV=1
Length = 174
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 28/134 (20%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--- 98
M PTLN GD ++ + +L GDI+ R N+I T RI+ G + +
Sbjct: 35 DMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQG 90
Query: 99 ---------------------FKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVP 137
F RN ++P + + D+ DSRQFG +
Sbjct: 91 QLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLID 150
Query: 138 YGLIEGKAFFRVWP 151
I G R +P
Sbjct: 151 KKDIIGNISLRYYP 164
>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
SV=1
Length = 174
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 28/134 (20%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--- 98
M PTLN GD ++ + +L GDI+ R N+I T RI+ G + +
Sbjct: 35 DMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQG 90
Query: 99 ---------------------FKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVP 137
F RN ++P + + D+ DSRQFG +
Sbjct: 91 QLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLID 150
Query: 138 YGLIEGKAFFRVWP 151
I G R +P
Sbjct: 151 KKDIIGNISLRYYP 164
>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MSSA476) GN=spsA PE=3 SV=1
Length = 174
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 28/134 (20%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--- 98
M PTLN GD ++ + +L GDI+ R N+I T RI+ G + +
Sbjct: 35 DMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQG 90
Query: 99 ---------------------FKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVP 137
F RN ++P + + D+ DSRQFG +
Sbjct: 91 QLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLID 150
Query: 138 YGLIEGKAFFRVWP 151
I G R +P
Sbjct: 151 KKDIIGNISLRYYP 164
>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
GN=spsA PE=3 SV=1
Length = 174
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 28/134 (20%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--- 98
M PTLN GD ++ + +L GDI+ R N+I T RI+ G + +
Sbjct: 35 DMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQG 90
Query: 99 ---------------------FKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVP 137
F RN ++P + + D+ DSRQFG +
Sbjct: 91 QLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLID 150
Query: 138 YGLIEGKAFFRVWP 151
I G R +P
Sbjct: 151 KKDIIGNISLRYYP 164
>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=spsA PE=3 SV=1
Length = 174
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 28/134 (20%)
Query: 42 SMLPTLNLTGDVILAEYVSHRVGRLGPGDIVFVRSPVDPNKIVTKRIVGVEGDRVTY--- 98
M PTLN GD ++ + +L GDI+ R N+I T RI+ G + +
Sbjct: 35 DMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQG 90
Query: 99 ---------------------FKPRNGDSCHTVVVPKGHVWIQGDNLYASRDSRQFGPVP 137
F RN ++P + + D+ DSRQFG +
Sbjct: 91 QLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLID 150
Query: 138 YGLIEGKAFFRVWP 151
I G R +P
Sbjct: 151 KKDIIGNISLRYYP 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.143 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,421,494
Number of Sequences: 539616
Number of extensions: 2833441
Number of successful extensions: 5789
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 5683
Number of HSP's gapped (non-prelim): 89
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)