BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031455
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9G6|U195A_ARATH MIP18 family protein At1g68310 OS=Arabidopsis thaliana GN=At1g68310
PE=2 SV=2
Length = 157
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/154 (76%), Positives = 138/154 (89%), Gaps = 1/154 (0%)
Query: 1 MVSGLINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEEL 60
MVSGLIN NP++Y KKERR R+ +S + DE E IDQ E+FDH+RDIKDPEHP +LE+L
Sbjct: 1 MVSGLINENPIIYPKKERRLRTDTS-ITDELTPEPIDQLEIFDHIRDIKDPEHPNTLEDL 59
Query: 61 KVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPGT 120
+V+TED++EVDDE SYVRVTFTPTVEHCSMATVIGLC+RVKL+RSLP R+K+DI VAPG+
Sbjct: 60 RVVTEDSVEVDDENSYVRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYKIDIRVAPGS 119
Query: 121 HATEAAVNKQLNDKERVAAALENPNLVDMVDECL 154
HATE A+NKQLNDKERVAAALENPNLV+MVDECL
Sbjct: 120 HATEDALNKQLNDKERVAAALENPNLVEMVDECL 153
>sp|Q9VTC4|U195A_DROME MIP18 family protein CG7949 OS=Drosophila melanogaster GN=CG7949
PE=1 SV=1
Length = 156
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 118/155 (76%), Gaps = 2/155 (1%)
Query: 1 MVSGLINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEEL 60
M + + N NP VY++ + R +A+ DE + D++E+FD +R+I DPEHP +LEEL
Sbjct: 1 MPTEIENINPNVYDRIKERVLTANE--EDENVPDPFDKREIFDLIRNINDPEHPLTLEEL 58
Query: 61 KVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPGT 120
V+ ED I ++D ++ V ++FTPT+ HCSMAT+IGL +RVKL+RSLPPRFKV + + PGT
Sbjct: 59 HVVQEDLIRINDSQNSVHISFTPTIPHCSMATLIGLSIRVKLLRSLPPRFKVTVEITPGT 118
Query: 121 HATEAAVNKQLNDKERVAAALENPNLVDMVDECLA 155
HA+E AVNKQL DKERVAAALEN +L +++++C+A
Sbjct: 119 HASELAVNKQLADKERVAAALENNHLAEVINQCIA 153
>sp|Q9D187|MIP18_MOUSE Mitotic spindle-associated MMXD complex subunit MIP18 OS=Mus
musculus GN=Fam96b PE=2 SV=1
Length = 163
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 113/151 (74%), Gaps = 2/151 (1%)
Query: 5 LINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVIT 64
L NANP++YE+ R +A DE + ID +E+FD +R I DPEHP +LEEL V+
Sbjct: 12 LENANPLIYERSGERPVTAGE--EDEEVPDSIDAREIFDLIRSINDPEHPLTLEELNVVE 69
Query: 65 EDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPGTHATE 124
+ I+V D S V V FTPT+ HCSMAT+IGL ++VKL+RSLP RFK+D+ + PGTHA+E
Sbjct: 70 QVRIQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASE 129
Query: 125 AAVNKQLNDKERVAAALENPNLVDMVDECLA 155
AVNKQL DKERVAAALEN +L+++V++CL+
Sbjct: 130 HAVNKQLADKERVAAALENTHLLEVVNQCLS 160
>sp|Q9Y3D0|MIP18_HUMAN Mitotic spindle-associated MMXD complex subunit MIP18 OS=Homo
sapiens GN=FAM96B PE=1 SV=1
Length = 163
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 113/151 (74%), Gaps = 2/151 (1%)
Query: 5 LINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVIT 64
L NANP++Y++ R +A DE + ID +E+FD +R I DPEHP +LEEL V+
Sbjct: 12 LENANPLIYQRSGERPVTAGE--EDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVE 69
Query: 65 EDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPGTHATE 124
+ ++V D S V V FTPT+ HCSMAT+IGL ++VKL+RSLP RFK+D+ + PGTHA+E
Sbjct: 70 QVRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASE 129
Query: 125 AAVNKQLNDKERVAAALENPNLVDMVDECLA 155
AVNKQL DKERVAAALEN +L+++V++CL+
Sbjct: 130 HAVNKQLADKERVAAALENTHLLEVVNQCLS 160
>sp|O62252|U195_CAEEL MIP18 family protein F45G2.10 OS=Caenorhabditis elegans GN=F45G2.10
PE=1 SV=1
Length = 160
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 112/152 (73%), Gaps = 3/152 (1%)
Query: 5 LINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVIT 64
L NANP +++ K R R + DE + ID E+FD +RDI DPEHPY+LE+L V+
Sbjct: 6 LDNANPTLFDSKPRH-RPVTGTERDESVEDPIDSWEIFDLIRDINDPEHPYTLEQLNVVQ 64
Query: 65 EDAIEV--DDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPGTHA 122
E+ I+V D+E ++V+V FTPT+ HCSMAT+IGL +RVKL+RSL P+ KV + + PG+H+
Sbjct: 65 EELIKVFIDEEETFVKVNFTPTIPHCSMATLIGLAIRVKLLRSLHPKVKVSVSITPGSHS 124
Query: 123 TEAAVNKQLNDKERVAAALENPNLVDMVDECL 154
TE ++N+QL DKERVAAA+EN L+ V+ECL
Sbjct: 125 TEESINRQLADKERVAAAMENQGLMHAVNECL 156
>sp|Q9SR25|U195B_ARATH MIP18 family protein At3g09380 OS=Arabidopsis thaliana GN=At3g09380
PE=2 SV=2
Length = 149
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 113/155 (72%), Gaps = 10/155 (6%)
Query: 1 MVSGLINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHP-YSLEE 59
M S L N NP++Y K+ RR R+ S DE+++ + +RDIKDPEHP SLE+
Sbjct: 1 MDSVLTNKNPIIYPKRTRRYRTDQSST-DEFSST--------NRIRDIKDPEHPELSLED 51
Query: 60 LKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPG 119
L V+TE+++EVDD +SYVR+TFTPT+ HC + T IGLC+ VKL++SLP RFKVD+ VAPG
Sbjct: 52 LNVLTEESVEVDDHKSYVRITFTPTLPHCHLPTHIGLCILVKLVQSLPARFKVDVRVAPG 111
Query: 120 THATEAAVNKQLNDKERVAAALENPNLVDMVDECL 154
+H E VNKQL DKERV AALENP LV ++++ +
Sbjct: 112 SHDKETTVNKQLGDKERVTAALENPELVALLNKMM 146
>sp|Q54QK1|FA96B_DICDI MIP18 family protein FAM96B OS=Dictyostelium discoideum GN=fam96B
PE=3 SV=2
Length = 163
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 111/158 (70%), Gaps = 11/158 (6%)
Query: 7 NANPVVY---------EKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSL 57
N NPV+Y E E S+ + +E ++ D+QE+FD VR I DPEHP +L
Sbjct: 4 NPNPVIYVDNENCKSFEDNENSFNSSRYSI-EEDQIDEFDEQEIFDLVRSITDPEHPLTL 62
Query: 58 EELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVA 117
E+L V+ + + ++ E SY+ + FTPTV HCSMA +IGL ++ KL RSLP RFKVD++V
Sbjct: 63 EQLNVVRIENVNINLENSYILLYFTPTVPHCSMANLIGLSIKEKLARSLPKRFKVDVIVT 122
Query: 118 PGTHATEAAVNKQLNDKERVAAALE-NPNLVDMVDECL 154
PG+H++E++VNKQLNDKERV+AAL+ + +++ +V+EC+
Sbjct: 123 PGSHSSESSVNKQLNDKERVSAALDTSSSILTIVNECI 160
>sp|Q9H5X1|FA96A_HUMAN MIP18 family protein FAM96A OS=Homo sapiens GN=FAM96A PE=1 SV=1
Length = 160
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 94/118 (79%), Gaps = 3/118 (2%)
Query: 40 EVFDHVRDIKDPEHPYSLEELKVITEDAIEV---DDERSYVRVTFTPTVEHCSMATVIGL 96
EV+D +R I+DPE P +LEEL+V++E +EV ++E V + FTPTV HCS+AT+IGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVSESCVEVQEINEEEYLVIIRFTPTVPHCSLATLIGL 98
Query: 97 CLRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPNLVDMVDECL 154
CLRVKL R LP + K++I ++ GTH+TE +NKQ+NDKERVAAA+ENPNL ++V++C+
Sbjct: 99 CLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLREIVEQCV 156
>sp|Q9DCL2|FA96A_MOUSE MIP18 family protein FAM96A OS=Mus musculus GN=Fam96a PE=2 SV=1
Length = 160
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 94/118 (79%), Gaps = 3/118 (2%)
Query: 40 EVFDHVRDIKDPEHPYSLEELKVITEDAIEVD--DERSY-VRVTFTPTVEHCSMATVIGL 96
EV+D +R I+DPE P +LEEL+V+TE +EV +E Y V + FTPTV HCS+AT+IGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIKFTPTVPHCSLATLIGL 98
Query: 97 CLRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPNLVDMVDECL 154
CLRVKL R LP + K++I ++ GTH+TE +NKQ+NDKERVAAA+ENPNL ++V++C+
Sbjct: 99 CLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLREIVEQCV 156
>sp|Q3T0U7|FA96A_BOVIN MIP18 family protein FAM96A OS=Bos taurus GN=FAM96A PE=2 SV=1
Length = 160
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 94/118 (79%), Gaps = 3/118 (2%)
Query: 40 EVFDHVRDIKDPEHPYSLEELKVITEDAIEVD--DERSY-VRVTFTPTVEHCSMATVIGL 96
EV+D +R I+DPE P +LEEL+V+TE +EV +E Y V + FTPTV HCS+AT+IGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIRFTPTVPHCSLATLIGL 98
Query: 97 CLRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPNLVDMVDECL 154
CLRVKL R LP + K++I ++ GTH+TE +NKQ+NDKERVAAA+ENPNL ++V++C+
Sbjct: 99 CLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLREIVEQCV 156
>sp|Q9UTL0|YIVG_SCHPO MIP18 family protein C144.16 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC144.16 PE=3 SV=1
Length = 179
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 106/176 (60%), Gaps = 21/176 (11%)
Query: 1 MVSGLINANPVVYEKKERRAR---------SASSCVNDEYAAEQ---------IDQQEVF 42
M + L N NP V E + +R S++ E +EQ ID QE++
Sbjct: 1 MSANLQNENPEVKELNQLPSRVEEEEDLLLSSTKQWLTEIESEQTNIKEERDPIDPQEIY 60
Query: 43 DHVRDIKDPEHPYSLEELKVITEDAIEVDDE---RSYVRVTFTPTVEHCSMATVIGLCLR 99
D + I DPEHP +L +L V+ + IEV D SY+ V TPT+ HCSM T+IGLC+R
Sbjct: 61 DLLAKINDPEHPLTLAQLSVVKLEDIEVVDNVEGDSYITVHITPTIPHCSMCTLIGLCIR 120
Query: 100 VKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPNLVDMVDECLA 155
V+L R LPPRF VD+ V GTHA+E+ VNKQLNDKERVAAA EN L+ +++ +A
Sbjct: 121 VRLERCLPPRFHVDVKVKKGTHASESQVNKQLNDKERVAAACENEQLLSVLNGMMA 176
>sp|Q9V968|U195B_DROME MIP18 family protein CG30152 OS=Drosophila melanogaster GN=CG30152
PE=1 SV=1
Length = 218
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 86/121 (71%), Gaps = 4/121 (3%)
Query: 38 QQEVFDHVRDIKDPEHPYSLEELKVITEDAIEV----DDERSYVRVTFTPTVEHCSMATV 93
Q+ ++D +R I+DPE P +LE+L V+ ED I V S VR+ F PTV HCS+AT+
Sbjct: 94 QETIYDLLRGIRDPEKPCTLEDLNVVYEDGIFVMPPTRSNVSVVRIEFNPTVPHCSLATL 153
Query: 94 IGLCLRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPNLVDMVDEC 153
IGLC+RVK+ R LP K+DI + G H TE +NKQ+NDKER+AAA+ENPNL D+V+ C
Sbjct: 154 IGLCIRVKVERGLPHNIKLDIYIKKGAHQTEEEINKQINDKERIAAAMENPNLRDLVENC 213
Query: 154 L 154
+
Sbjct: 214 I 214
>sp|P38829|YHS2_YEAST MIP18 family protein YHR122W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YHR122W PE=1 SV=1
Length = 231
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 93/143 (65%), Gaps = 5/143 (3%)
Query: 17 ERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDD---- 72
E S + +E + ID QE++D + I DPEHP SL +L V+ + I+V D
Sbjct: 85 ESEDESVAGGGKEEEEPDLIDAQEIYDLIAHISDPEHPLSLGQLSVVNLEDIDVHDSGNQ 144
Query: 73 -ERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQL 131
E + V + TPT+ HCS+AT+IGL +RV+L RSLPPRF++ I++ GTH +E VNKQL
Sbjct: 145 NEMAEVVIKITPTITHCSLATLIGLGIRVRLERSLPPRFRITILLKKGTHDSENQVNKQL 204
Query: 132 NDKERVAAALENPNLVDMVDECL 154
NDKERVAAA EN L+ +V + L
Sbjct: 205 NDKERVAAACENEQLLGVVSKML 227
>sp|Q9GPR0|FA96A_DICDI MIP18 family protein FAM96A OS=Dictyostelium discoideum GN=fam96A
PE=3 SV=1
Length = 150
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 19/138 (13%)
Query: 36 IDQQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDDERS-------------------Y 76
ID+ +VFD +R IKDPE P +LEELKV+ ED I V D +
Sbjct: 8 IDKIDVFDIIRHIKDPEFPKTLEELKVVNEDWITVIDNNDINDSDDINNNNNENYKGYCF 67
Query: 77 VRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKER 136
+++ F PTV HC +A I LC+R K+ LP R K++I + GTH TE +NKQ+NDKER
Sbjct: 68 IKILFQPTVPHCHLAPTIALCIREKIKEYLPKRSKIEIYIKKGTHQTEDEINKQINDKER 127
Query: 137 VAAALENPNLVDMVDECL 154
+ AALENP + +V +C+
Sbjct: 128 IIAALENPEIFQLVKKCI 145
>sp|O53551|FAC17_MYCTU Long-chain-fatty-acid--CoA ligase FadD17 OS=Mycobacterium
tuberculosis GN=fadD17 PE=1 SV=1
Length = 502
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 51 PEHPYSLEELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRF 110
P HP E L ++E +DD Y +FT +H I LR +L + PP
Sbjct: 3 PTHPTVTELLLPLSE----IDDRGVYFEDSFTSWRDHIRHGAAIAAALRERLDPARPPHV 58
Query: 111 KVDIMVAPGTHATEAA 126
V + P AT A
Sbjct: 59 GVLLQNTPFFSATLVA 74
>sp|Q7TWC5|FAC17_MYCBO Long-chain-fatty-acid--CoA ligase FadD17 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadD17 PE=3 SV=1
Length = 502
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 51 PEHPYSLEELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRF 110
P HP E L ++E +DD Y +FT +H I LR +L + PP
Sbjct: 3 PTHPTVTELLLPLSE----IDDRGVYFEDSFTSWRDHIRHGAAIAAALRERLDPARPPHV 58
Query: 111 KVDIMVAPGTHATEAA 126
V + P AT A
Sbjct: 59 GVLLQNTPFFSATLVA 74
>sp|B3MK91|EFGM_DROAN Elongation factor G, mitochondrial OS=Drosophila ananassae GN=ico
PE=3 SV=1
Length = 745
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 38 QQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLC 97
+QE+ +H+ + D LEE K TED I+ R+ ++ TFTP ++G
Sbjct: 246 RQELIEHLSNADDTFGELFLEE-KPFTEDDIKAALRRTCIKRTFTP--------VLVGTA 296
Query: 98 LRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERV 137
L+ K ++ L ++ + PG A V K+ D E++
Sbjct: 297 LKNKGVQPLLDAV-LEYLPNPGEVENLAFVEKEGQDPEKI 335
>sp|Q2SBC1|MIAA2_HAHCH tRNA dimethylallyltransferase 2 OS=Hahella chejuensis (strain KCTC
2396) GN=miaA2 PE=3 SV=1
Length = 332
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 44 HVRDIKDPEHPYSLEELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLM 103
H+ DI+DP PYS E + DA+ + ++ V P + ++ LC + M
Sbjct: 66 HLIDIRDPAEPYSAAEFRT---DALRLMEQS--VNAGRIPLLVGGTIMYYKALCQGLGDM 120
Query: 104 RSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPN 145
S + I+ A A+++QL + VAAA +PN
Sbjct: 121 PSADENVRGQIL-AEAEQVGWPALHEQLRQVDPVAAAKIHPN 161
>sp|A6QC95|ACCA_SULNB Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Sulfurovum sp. (strain NBC37-1) GN=accA PE=3 SV=1
Length = 312
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 49 KDPEHPYSLEELKVITEDAIEVDDERSY 76
+ P+ PYSL+ +K++ +DA E+ +R++
Sbjct: 58 RHPDRPYSLDYIKLLMDDAYEIHGDRAF 85
>sp|Q9VM33|EFGM_DROME Elongation factor G, mitochondrial OS=Drosophila melanogaster
GN=ico PE=2 SV=2
Length = 745
Score = 30.0 bits (66), Expect = 6.7, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 38 QQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLC 97
+QE+ +H+ + + LEE K TED I+ R+ + TFTP ++G
Sbjct: 246 RQELIEHLSNADETLGELFLEE-KPFTEDDIKAALRRTCINRTFTP--------VLVGTA 296
Query: 98 LRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERV 137
L+ K ++ L +D + PG + K+ D E+V
Sbjct: 297 LKNKGVQPLLDAV-LDYLPNPGEVENLGFIEKEGQDPEKV 335
>sp|Q01279|EGFR_MOUSE Epidermal growth factor receptor OS=Mus musculus GN=Egfr PE=1 SV=1
Length = 1210
Score = 29.6 bits (65), Expect = 7.1, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 109 RFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPNLVDMVDECLAPT 157
+ K+ + + AT NK++ D+ V A+++NP++ ++ CL T
Sbjct: 739 KVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 787
>sp|P00533|EGFR_HUMAN Epidermal growth factor receptor OS=Homo sapiens GN=EGFR PE=1 SV=2
Length = 1210
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 109 RFKVDIMVAPGTHATEAAVNKQLNDKERVAAALENPNLVDMVDECLAPT 157
+ K+ + + AT NK++ D+ V A+++NP++ ++ CL T
Sbjct: 737 KVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 785
>sp|B5YIK7|ACCA_THEYD Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303
/ DSM 11347 / YP87) GN=accA PE=3 SV=1
Length = 328
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 49 KDPEHPYSLEELKVITEDAIEVDDERSY 76
+ PE PY+L+ + +I ED IE+ +R +
Sbjct: 64 RHPERPYTLDYISIIFEDFIELHGDRRF 91
>sp|Q03NA6|ADDB_LACBA ATP-dependent helicase/deoxyribonuclease subunit B OS=Lactobacillus
brevis (strain ATCC 367 / JCM 1170) GN=rexB PE=3 SV=1
Length = 1201
Score = 29.6 bits (65), Expect = 9.2, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 121 HATEAAVNKQLNDKERVAAALENPNLVDMVDECLAPTFD 159
HAT + K +ND++ AAL++ L +M DE +A D
Sbjct: 848 HATLDGLMKLVNDQKLNLAALDDQQLREMTDEVMAKLLD 886
>sp|B3N6A5|EFGM_DROER Elongation factor G, mitochondrial OS=Drosophila erecta GN=ico PE=3
SV=1
Length = 745
Score = 29.3 bits (64), Expect = 9.4, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 38 QQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLC 97
+QE+ +H+ + + LEE K TED I+ R+ + TFTP ++G
Sbjct: 246 RQELIEHLSNADETLGELFLEE-KPFTEDDIKAALRRTCINRTFTP--------VLVGTA 296
Query: 98 LRVKLMRSLPPRFKVDIMVAPGTHATEAAVNKQLNDKERV 137
L+ K ++ L +D + PG + K+ D E++
Sbjct: 297 LKNKGVQPLLDAV-LDYLPNPGEVENLGFIEKEGQDPEKI 335
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,383,188
Number of Sequences: 539616
Number of extensions: 2238405
Number of successful extensions: 6986
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 6948
Number of HSP's gapped (non-prelim): 41
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)