Query 031457
Match_columns 159
No_of_seqs 134 out of 1109
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 23:12:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 1.3E-42 4.4E-47 256.9 14.3 125 32-157 2-126 (151)
2 1i7k_A Ubiquitin-conjugating e 100.0 6.7E-43 2.3E-47 264.8 11.9 125 31-156 27-151 (179)
3 1z2u_A Ubiquitin-conjugating e 100.0 1.6E-42 5.6E-47 256.0 13.2 124 32-156 2-125 (150)
4 1zdn_A Ubiquitin-conjugating e 100.0 1.4E-42 4.7E-47 258.5 12.6 127 29-156 8-134 (158)
5 2c2v_B Ubiquitin-conjugating e 100.0 1E-42 3.5E-47 258.2 10.7 125 32-157 3-127 (154)
6 2e2c_A Ubiquitin conjugating e 100.0 3E-42 1E-46 256.1 13.3 124 32-156 7-130 (156)
7 2ayv_A Ubiquitin-conjugating e 100.0 3.9E-42 1.3E-46 257.9 13.8 124 32-156 19-142 (166)
8 2c4o_A Ubiquitin-conjugating e 100.0 5.1E-42 1.8E-46 257.0 14.2 127 29-156 14-140 (165)
9 1ayz_A UBC2, ubiquitin-conjuga 100.0 4.5E-42 1.5E-46 258.2 13.1 123 33-156 3-125 (169)
10 1yh2_A HSPC150 protein similar 100.0 9.8E-42 3.3E-46 256.4 14.5 125 31-156 1-129 (169)
11 2fo3_A Ubiquitin-conjugating e 100.0 7.3E-42 2.5E-46 245.6 13.1 117 32-149 4-121 (125)
12 2r0j_A Ubiquitin carrier prote 100.0 7.9E-42 2.7E-46 252.1 13.2 120 36-156 3-122 (149)
13 1jat_A Ubiquitin-conjugating e 100.0 5.1E-42 1.8E-46 254.7 12.2 123 34-157 5-127 (155)
14 3h8k_A Ubiquitin-conjugating e 100.0 1.2E-41 4E-46 254.7 14.0 123 33-156 2-138 (164)
15 2aak_A UBC1, ubiquitin conjuga 100.0 9.9E-42 3.4E-46 252.3 13.2 123 33-156 3-125 (152)
16 2h2y_A Ubiquitin-conjugating e 100.0 4.2E-41 1.4E-45 244.9 16.0 116 32-148 18-134 (136)
17 3rz3_A Ubiquitin-conjugating e 100.0 1.8E-41 6E-46 258.0 13.9 126 30-156 3-142 (183)
18 2ucz_A UBC7, ubiquitin conjuga 100.0 1.7E-41 5.8E-46 254.2 13.4 122 33-155 3-138 (165)
19 2awf_A Ubiquitin-conjugating e 100.0 2.4E-41 8.1E-46 255.0 13.9 128 29-157 12-153 (172)
20 3bzh_A Ubiquitin-conjugating e 100.0 1.7E-41 5.9E-46 260.0 13.2 123 33-156 47-169 (194)
21 1fxt_A Ubiquitin-conjugating e 100.0 7.7E-42 2.6E-46 252.2 9.8 121 35-156 2-124 (149)
22 3rcz_B SUMO-conjugating enzyme 100.0 2.9E-41 9.8E-46 252.5 12.3 125 31-156 7-138 (163)
23 1yrv_A Ubiquitin-conjugating l 100.0 2.4E-41 8.2E-46 254.3 10.6 125 32-157 21-148 (169)
24 2bep_A Ubiquitin-conjugating e 100.0 1.2E-40 3.9E-45 248.3 13.8 124 32-156 6-133 (159)
25 2f4z_A Tgtwinscan_2721 - E2 do 100.0 7.2E-41 2.4E-45 256.3 12.3 126 30-156 28-167 (193)
26 2pwq_A Ubiquitin conjugating e 100.0 5.2E-41 1.8E-45 261.0 11.2 124 32-156 21-145 (216)
27 2gjd_A Ubiquitin-conjugating e 100.0 1.9E-40 6.4E-45 246.7 12.1 123 33-156 3-132 (157)
28 1wzv_A Ubiquitin-conjugating e 100.0 1.9E-40 6.5E-45 246.2 11.4 121 34-156 4-126 (155)
29 3k9o_A Ubiquitin-conjugating e 100.0 3.1E-40 1.1E-44 254.4 12.1 123 33-156 4-130 (201)
30 2grr_A Ubiquitin-conjugating e 100.0 4.5E-40 1.5E-44 245.6 12.4 124 32-156 5-135 (161)
31 2nvu_C NEDD8-conjugating enzym 100.0 7.4E-40 2.5E-44 248.4 12.9 124 29-156 21-145 (180)
32 3e46_A Ubiquitin-conjugating e 100.0 1.5E-39 5.3E-44 257.8 14.0 124 32-156 55-182 (253)
33 2a4d_A Ubiquitin-conjugating e 100.0 3.8E-39 1.3E-43 240.1 14.8 125 32-157 23-155 (160)
34 1y8x_A Ubiquitin-conjugating e 100.0 1.1E-39 3.9E-44 243.2 11.8 121 32-156 4-125 (160)
35 2q0v_A Ubiquitin-conjugating e 100.0 2.6E-39 8.8E-44 240.3 13.5 126 30-157 17-149 (156)
36 3fn1_B NEDD8-conjugating enzym 100.0 1.5E-39 5.1E-44 244.0 11.6 127 28-156 8-142 (167)
37 2a7l_A Hypothetical ubiquitin- 100.0 1.1E-39 3.8E-44 237.3 10.3 109 36-145 24-136 (136)
38 2hlw_A Ubiquitin-conjugating e 100.0 5.4E-39 1.8E-43 241.6 14.3 125 32-157 33-165 (170)
39 1jat_B Ubiquitin-conjugating e 100.0 1.2E-39 4.1E-44 237.7 9.8 125 31-157 3-134 (138)
40 1tte_A Ubiquitin-conjugating e 100.0 2.6E-40 9.1E-45 256.9 6.5 122 34-156 2-125 (215)
41 2y9m_A Ubiquitin-conjugating e 100.0 5.9E-39 2E-43 241.9 13.1 125 32-156 4-142 (172)
42 2f4w_A Ubiquitin-conjugating e 100.0 2.1E-38 7E-43 241.7 13.9 127 26-155 6-135 (187)
43 1c4z_D UBCH7, ubiquitin conjug 100.0 3.7E-39 1.3E-43 239.0 8.1 121 34-156 2-124 (154)
44 2onu_A Ubiquitin-conjugating e 100.0 1.3E-39 4.5E-44 241.0 4.6 119 35-157 3-123 (152)
45 4ddg_A Ubiquitin-conjugating e 100.0 6.5E-38 2.2E-42 263.0 13.4 124 33-157 2-125 (399)
46 3o2u_A NEDD8-conjugating enzym 100.0 4.7E-38 1.6E-42 240.3 11.4 126 28-157 23-155 (190)
47 2z5d_A Ubiquitin-conjugating e 100.0 1.4E-38 4.9E-43 240.9 6.5 118 34-156 25-144 (179)
48 1zuo_A Hypothetical protein LO 100.0 1.1E-37 3.6E-42 237.6 8.3 128 21-149 14-158 (186)
49 4ds2_A Ubiquitin-conjugating e 100.0 8.4E-38 2.9E-42 234.6 7.3 123 33-156 7-146 (167)
50 1yf9_A Ubiquitin carrier prote 100.0 8E-38 2.7E-42 235.4 6.6 118 34-156 12-131 (171)
51 3ceg_A Baculoviral IAP repeat- 100.0 2.6E-35 9E-40 239.9 13.8 120 29-149 71-207 (323)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.1E-27 3.8E-32 177.2 3.6 102 30-138 28-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 1.1E-19 3.8E-24 135.0 9.7 114 37-151 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 1E-19 3.6E-24 132.0 2.5 89 32-130 32-131 (168)
55 3obq_A Tumor susceptibility ge 99.5 5.2E-14 1.8E-18 102.8 9.2 105 39-149 25-141 (146)
56 2ebm_A RWD domain-containing p 95.9 0.037 1.3E-06 38.3 7.7 68 35-105 11-78 (128)
57 2yz0_A Serine/threonine-protei 95.7 0.12 4.2E-06 36.1 9.7 71 34-106 10-86 (138)
58 2day_A Ring finger protein 25; 95.0 0.13 4.5E-06 35.4 7.9 108 38-148 12-126 (128)
59 3zqs_A E3 ubiquitin-protein li 94.5 0.31 1.1E-05 36.3 9.3 81 38-145 5-87 (186)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 94.1 0.45 1.5E-05 33.0 9.1 109 34-148 10-130 (137)
61 2ebk_A RWD domain-containing p 93.4 0.2 7E-06 34.5 6.0 66 38-105 11-79 (128)
62 2daw_A RWD domain containing p 91.9 0.71 2.4E-05 33.0 7.4 24 83-106 76-99 (154)
63 2dax_A Protein C21ORF6; RWD do 88.4 0.27 9.2E-06 35.0 2.6 24 83-106 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 47.6 15 0.00053 17.7 2.2 21 34-55 5-25 (26)
65 2bum_A Protocatechuate 3,4-dio 32.3 30 0.001 25.8 2.8 25 80-104 109-138 (209)
66 3rls_A YAF9, protein AF-9 homo 31.2 1.1E+02 0.0038 22.2 5.6 45 62-108 30-74 (175)
67 3qrl_A Transcription initiatio 27.7 1.3E+02 0.0045 21.0 5.3 43 64-108 32-77 (140)
68 2cu9_A Spcia1, histone chapero 25.7 85 0.0029 22.5 4.1 38 63-100 36-86 (161)
69 2jrw_A Cyclic extended PEP.1; 21.8 54 0.0018 15.7 1.6 16 95-110 4-19 (26)
70 2rf4_B DNA-directed RNA polyme 20.2 51 0.0017 21.2 1.7 13 34-46 62-74 (87)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.3e-42 Score=256.88 Aligned_cols=125 Identities=40% Similarity=0.676 Sum_probs=119.3
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
+..+.+||++|+++|++ +++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 a~~a~~RL~kEl~~l~~-~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQ-DPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHH-SCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHh-CCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 56789999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 112 VDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 112 I~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
|+.+|+||+++|.++|+|+++|++||.+|+++|.+||+.++.+.++
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~a 126 (151)
T 4gpr_A 81 INKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEV 126 (151)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHH
T ss_pred ECCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHH
Confidence 9999999999999999999999999999999999999977666543
No 2
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.7e-43 Score=264.81 Aligned_cols=125 Identities=59% Similarity=1.021 Sum_probs=117.2
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccccc
Q 031457 31 DTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHP 110 (159)
Q Consensus 31 ~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 110 (159)
++..+.+||++||++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||
T Consensus 27 ~~~~~~~RL~kEl~~l~~-~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 105 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMM-SGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHP 105 (179)
T ss_dssp ---CHHHHHHHHHHHHHH-HCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred cChHHHHHHHHHHHHHHh-CCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccC
Confidence 567789999999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 111 NVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 111 nI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||+.+|+||+++|.+.|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 106 NV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~ 151 (179)
T 1i7k_A 106 NVDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTH 151 (179)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred ccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHH
Confidence 9999999999999999999999999999999999999987666544
No 3
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.6e-42 Score=256.04 Aligned_cols=124 Identities=40% Similarity=0.676 Sum_probs=118.2
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
+..+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~-~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGR-DPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp CCHHHHHHHHHHHHHHH-SCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHh-CCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 56788999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 112 VDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 112 I~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++.++.+.+
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~ 125 (150)
T 1z2u_A 81 INSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPE 125 (150)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred CCCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHH
Confidence 999999999999999999999999999999999999987665544
No 4
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-42 Score=258.51 Aligned_cols=127 Identities=30% Similarity=0.501 Sum_probs=119.8
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccc
Q 031457 29 TVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCF 108 (159)
Q Consensus 29 ~~~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 108 (159)
...+..+.+||++||++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|
T Consensus 8 ~~~s~~~~~RL~kEl~~l~~-~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 86 (158)
T 1zdn_A 8 ENLPPHIIRLVYKEVTTLTA-DPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIF 86 (158)
T ss_dssp CCSCHHHHHHHHHHHHHHHH-SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred cccCHHHHHHHHHHHHHHHh-CCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcc
Confidence 34567889999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 109 HPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 109 HpnI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||||+.+|.||+++|.+.|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 87 HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~ 134 (158)
T 1zdn_A 87 HPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEE 134 (158)
T ss_dssp CTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHH
T ss_pred cCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHH
Confidence 999999999999999999999999999999999999999986655543
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1e-42 Score=258.20 Aligned_cols=125 Identities=38% Similarity=0.619 Sum_probs=116.6
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
+..+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 3 s~~~~~RL~kEl~~l~~-~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 3 SAGLPRRIIKETQRLLA-EPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp SCSCCHHHHHHHHHHHH-SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred cHHHHHHHHHHHHHHHh-CCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 33566999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 112 VDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 112 I~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|++.++.+.+|
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~a 127 (154)
T 2c2v_B 82 VDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 127 (154)
T ss_dssp BCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHH
T ss_pred CccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHH
Confidence 9999999999999999999999999999999999999876665543
No 6
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3e-42 Score=256.11 Aligned_cols=124 Identities=56% Similarity=1.063 Sum_probs=117.6
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
+..+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.+++||||
T Consensus 7 ~~~~~~RL~kEl~~l~~-~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 85 (156)
T 2e2c_A 7 RHSVSKRLQQELRTLLM-SGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPN 85 (156)
T ss_dssp CCCHHHHHHHHHHHHHH-HCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHh-CCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCC
Confidence 44678999999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 112 VDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 112 I~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|+.+|.||+++|.+.|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 86 v~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~ 130 (156)
T 2e2c_A 86 VDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQ 130 (156)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHH
T ss_pred CccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHH
Confidence 999999999999999999999999999999999999986665544
No 7
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-42 Score=257.90 Aligned_cols=124 Identities=40% Similarity=0.693 Sum_probs=117.9
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
...+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 19 ~~~~~~RL~kEl~~l~~-~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 97 (166)
T 2ayv_A 19 FQGALKRINKELNDLSK-DPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPN 97 (166)
T ss_dssp CTTHHHHHHHHHHHHHH-SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CcHHHHHHHHHHHHHHh-CCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCc
Confidence 34588999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 112 VDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 112 I~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 98 I~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~ 142 (166)
T 2ayv_A 98 INSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPE 142 (166)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred CCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHH
Confidence 999999999999999999999999999999999999987665544
No 8
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=5.1e-42 Score=257.04 Aligned_cols=127 Identities=39% Similarity=0.658 Sum_probs=118.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccc
Q 031457 29 TVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCF 108 (159)
Q Consensus 29 ~~~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 108 (159)
......+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|
T Consensus 14 ~~~~~~~~~RL~kEl~~l~~-~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~ 92 (165)
T 2c4o_A 14 VPRGSMALKRIHKELNDLAR-DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 92 (165)
T ss_dssp --CCHHHHHHHHHHHHHHHS-SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred ccCCcHHHHHHHHHHHHHHh-CCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCc
Confidence 34456789999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 109 HPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 109 HpnI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||||+.+|.||+++|.++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 93 HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~ 140 (165)
T 2c4o_A 93 HPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPE 140 (165)
T ss_dssp BTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHH
T ss_pred CCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHH
Confidence 999999999999999999999999999999999999999987665544
No 9
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-42 Score=258.23 Aligned_cols=123 Identities=39% Similarity=0.633 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccce
Q 031457 33 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNV 112 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI 112 (159)
..+.+||++||++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+||||||
T Consensus 3 ~~a~~RL~kEl~~l~~-~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI 81 (169)
T 1ayz_A 3 TPARRRLMRDFKRMKE-DAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNV 81 (169)
T ss_dssp CHHHHHHHHHHHHHHH-SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHh-CCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCC
Confidence 3678999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 113 DQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 113 ~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+.+|.||+++|.+.|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 82 ~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~ 125 (169)
T 1ayz_A 82 YANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVE 125 (169)
T ss_dssp CTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHH
T ss_pred CCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHH
Confidence 99999999999999999999999999999999999987665544
No 10
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.8e-42 Score=256.43 Aligned_cols=125 Identities=32% Similarity=0.571 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccccc
Q 031457 31 DTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHP 110 (159)
Q Consensus 31 ~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 110 (159)
++..+.+||++||++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||
T Consensus 1 gs~~~~~RL~kEl~~l~~-~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (169)
T 1yh2_A 1 GSMQRASRLKRELHMLAT-EPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHP 79 (169)
T ss_dssp CCHHHHHHHHHHHHHHHH-SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred CchHHHHHHHHHHHHHHh-CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccc
Confidence 356889999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCcEEeecCC----CCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 111 NVDQYGNICLDILQ----DKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 111 nI~~~G~icl~~l~----~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 80 Nv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~ 129 (169)
T 1yh2_A 80 NIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMAD 129 (169)
T ss_dssp TBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred cCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHH
Confidence 99999999999998 89999999999999999999999987665544
No 11
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=7.3e-42 Score=245.60 Aligned_cols=117 Identities=32% Similarity=0.496 Sum_probs=106.3
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccc-ccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC-FHP 110 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hp 110 (159)
+..+.+||++|+++|++ +++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 4 m~~a~~RL~kEl~~l~~-~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLN-NPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp -----CHHHHHHHHHHH-SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred chHHHHHHHHHHHHHHh-CCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 34678999999999999 9999999999999999999999999999999999999999999999999999999996 999
Q ss_pred ceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCC
Q 031457 111 NVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLV 149 (159)
Q Consensus 111 nI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~ 149 (159)
||+.+|+||+++|.++|+|++||++||.+|+++|.+|+.
T Consensus 83 nv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~ 121 (125)
T 2fo3_A 83 HVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKE 121 (125)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC----
T ss_pred cCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999986
No 12
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=7.9e-42 Score=252.13 Aligned_cols=120 Identities=43% Similarity=0.676 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccceeCC
Q 031457 36 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQY 115 (159)
Q Consensus 36 ~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~~~ 115 (159)
.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+.+
T Consensus 3 ~~RL~kEl~~l~~-~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLAN-EPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHH-SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHh-CCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 4899999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 116 GNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 116 G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|+||+++|.+.|+|++||++||.+|+++|.+|++.++.+.+
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 122 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSK 122 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCH
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHH
Confidence 99999999999999999999999999999999986665554
No 13
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=5.1e-42 Score=254.65 Aligned_cols=123 Identities=37% Similarity=0.618 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccccccee
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVD 113 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~ 113 (159)
.+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+
T Consensus 5 ~~~~RL~kE~~~l~~-~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 5 SLPKRIIKETEKLVS-DPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp SCCHHHHHHHHHHHH-SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHh-CCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 356999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 114 QYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 114 ~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
.+|.||+++|.+.|+|+++|.+||.+|+++|.+|++.++.+.++
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~a 127 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDV 127 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTT
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHH
Confidence 99999999999999999999999999999999999876666554
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.2e-41 Score=254.74 Aligned_cols=123 Identities=33% Similarity=0.565 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEEeecCC-CcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 33 TSVTQRLQKELMSLMMSGGDLGVSAFPEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~~~~i~~~~~~~-n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
..+.+||++||++|++ ++++||++.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 2 ~~a~~RL~kEl~~l~~-~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTL-NPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CHHHHHHHHHHHHHHH-SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred cHHHHHHHHHHHHHHh-CCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 3688999999999999 9999999998866 9999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEeecCC-------------CCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 112 VDQYGNICLDILQ-------------DKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 112 I~~~G~icl~~l~-------------~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|+.+|+||+++|. ++|+|++||++||.+|+++|.+||+.++.+.+
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~ 138 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVD 138 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHH
Confidence 9999999999996 78999999999999999999999987666544
No 15
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=9.9e-42 Score=252.34 Aligned_cols=123 Identities=41% Similarity=0.664 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccce
Q 031457 33 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNV 112 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI 112 (159)
..+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||
T Consensus 3 ~~a~~RL~~E~~~l~~-~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (152)
T 2aak_A 3 TPARKRLMRDFKRLQQ-DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI 81 (152)
T ss_dssp CHHHHHHHHHHHHHHH-SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHh-CCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCC
Confidence 3678999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 113 DQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 113 ~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+.+|.||+++|.+.|+|+++|.+||.+|+++|.+|++.++.+.+
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 125 (152)
T 2aak_A 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSE 125 (152)
T ss_dssp CTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHH
T ss_pred CCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHH
Confidence 99999999999999999999999999999999999987665544
No 16
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.2e-41 Score=244.85 Aligned_cols=116 Identities=30% Similarity=0.496 Sum_probs=112.0
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccc-ccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC-FHP 110 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hp 110 (159)
+..+.+||++|+++|++ +++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 18 ~~~~~~RL~kEl~~l~~-~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 96 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLK-NPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHT 96 (136)
T ss_dssp TTSHHHHHHHHHHHHHH-SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCT
T ss_pred chHHHHHHHHHHHHHHh-CCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCC
Confidence 44678999999999999 9999999999999999999999999999999999999999999999999999999996 999
Q ss_pred ceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCC
Q 031457 111 NVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLL 148 (159)
Q Consensus 111 nI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~ 148 (159)
||+.+|+||+++|.++|+|+++|++||.+|+++|.+|+
T Consensus 97 nv~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~ 134 (136)
T 2h2y_A 97 HVYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAK 134 (136)
T ss_dssp TBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSC
T ss_pred cCCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcC
Confidence 99999999999999999999999999999999999997
No 17
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.8e-41 Score=257.96 Aligned_cols=126 Identities=33% Similarity=0.590 Sum_probs=116.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCCCeEEe-ecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccc
Q 031457 30 VDTTSVTQRLQKELMSLMMSGGDLGVSAF-PEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCF 108 (159)
Q Consensus 30 ~~~~~~~~RL~~El~~l~~~~~~~~i~~~-~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 108 (159)
|++..+.|||++||++|++ ++++||++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 3 m~~~~a~kRL~kEl~~l~~-~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 81 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQE-EPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMW 81 (183)
T ss_dssp --CCHHHHHHHHHHHHHHH-SCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred CcchHHHHHHHHHHHHHHh-CCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCc
Confidence 5567889999999999999 999999998 66789999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCcEEeecCC-------------CCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 109 HPNVDQYGNICLDILQ-------------DKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 109 HpnI~~~G~icl~~l~-------------~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||||+.+|.||+++|. ++|+|+++|++||.+|+++|.+||+.++.+.+
T Consensus 82 HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~ 142 (183)
T 3rz3_A 82 HPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVD 142 (183)
T ss_dssp CTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHH
T ss_pred cCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHH
Confidence 9999999999999996 88999999999999999999999987665544
No 18
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-41 Score=254.17 Aligned_cols=122 Identities=33% Similarity=0.608 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEEeecC-CCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 33 TSVTQRLQKELMSLMMSGGDLGVSAFPEG-ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~~~~i~~~~~~-~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
..+.+||++|+++|++ ++++||++.+.+ +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 3 ~~a~~RL~kEl~~l~~-~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 81 (165)
T 2ucz_A 3 KTAQKRLLKELQQLIK-DSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPN 81 (165)
T ss_dssp HHHHHHHHHHHHHHHH-SCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTT
T ss_pred hHHHHHHHHHHHHHHh-CCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCC
Confidence 4788999999999999 999999999875 69999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEeecC-------------CCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCC
Q 031457 112 VDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGGLLVLPCMIG 155 (159)
Q Consensus 112 I~~~G~icl~~l-------------~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~ 155 (159)
|+.+|+||+++| .++|+|+++|++||.+|+++|.+|++.++.+.
T Consensus 82 v~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~ 138 (165)
T 2ucz_A 82 IYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANI 138 (165)
T ss_dssp BCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCH
T ss_pred CCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhH
Confidence 999999999999 68999999999999999999999998555443
No 19
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.4e-41 Score=254.98 Aligned_cols=128 Identities=31% Similarity=0.506 Sum_probs=112.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCCCeEEeecC-CCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccc
Q 031457 29 TVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEG-ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 107 (159)
Q Consensus 29 ~~~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~-~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 107 (159)
+.++..+.+||++||++|++ ++++||++.+.+ +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++
T Consensus 12 ~~~~~~~~~rL~kEl~~l~~-~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i 90 (172)
T 2awf_A 12 SGLVPRGSLLLRRQLAELNK-NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 90 (172)
T ss_dssp -CCCCTTHHHHHHHHHHHHH-SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred CCChHHHHHHHHHHHHHHHh-CCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCC
Confidence 34567889999999999999 999999999875 7999999999999999999999999999999999999999999999
Q ss_pred cccceeCCCcEEeecCC-------------CCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 108 FHPNVDQYGNICLDILQ-------------DKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 108 ~HpnI~~~G~icl~~l~-------------~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
|||||+.+|+||+++|. +.|+|+++|++||.+|+++|.+|++.++.+.+|
T Consensus 91 ~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~a 153 (172)
T 2awf_A 91 WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDA 153 (172)
T ss_dssp CCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC----------
T ss_pred ccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHH
Confidence 99999999999999996 689999999999999999999999855544443
No 20
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.7e-41 Score=259.99 Aligned_cols=123 Identities=41% Similarity=0.725 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccce
Q 031457 33 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNV 112 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI 112 (159)
..+.+||++||++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.+++|||||
T Consensus 47 s~a~~RL~kEl~~l~~-~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITL-DPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHH-SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHh-CCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceE
Confidence 5688999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 113 DQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 113 ~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+.+|.||+++|.+.|+|+++|.+||.+|+++|.+|++.++.+.+
T Consensus 126 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~ 169 (194)
T 3bzh_A 126 NSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGS 169 (194)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred CCCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHH
Confidence 99999999999999999999999999999999999986665543
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=7.7e-42 Score=252.17 Aligned_cols=121 Identities=32% Similarity=0.575 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeecCC-CcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccccccee
Q 031457 35 VTQRLQKELMSLMMSGGDLGVSAFPEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVD 113 (159)
Q Consensus 35 ~~~RL~~El~~l~~~~~~~~i~~~~~~~-n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~ 113 (159)
+.+||++|+++|++ ++++||++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~~~RL~~El~~l~~-~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 2 RAKRIMKEIQAVKD-DPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CHHHHHHHHHHHHH-CGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHh-CCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 56999999999999 9999999999877 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 114 Q-YGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 114 ~-~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
. +|.||+++|.++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 124 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAE 124 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHH
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHH
Confidence 9 999999999999999999999999999999999987665544
No 22
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-41 Score=252.53 Aligned_cols=125 Identities=34% Similarity=0.572 Sum_probs=116.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCCCeEEeecCC-----CcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccc
Q 031457 31 DTTSVTQRLQKELMSLMMSGGDLGVSAFPEGE-----SIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFET 105 (159)
Q Consensus 31 ~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~-----n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 105 (159)
++..+.+||++||++|++ ++++||++.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|
T Consensus 7 ~~~~~~~RL~kEl~~l~~-~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t 85 (163)
T 3rcz_B 7 HSSLCKTRLQEERKQWRR-DHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTP 85 (163)
T ss_dssp --CHHHHHHHHHHHHHHH-SCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CcHHHHHHHHHHHHHHHh-CCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeC
Confidence 467899999999999999 9999999999865 8999999999999999999999999999999999999999999
Q ss_pred cccccceeCCCcEEeecCCC--CCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 106 MCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 106 ~i~HpnI~~~G~icl~~l~~--~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
++|||||+.+|.||+++|.+ +|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 86 ~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~ 138 (163)
T 3rcz_B 86 PLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTE 138 (163)
T ss_dssp CCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHH
T ss_pred CCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHH
Confidence 99999999999999999975 5999999999999999999999986665544
No 23
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-41 Score=254.25 Aligned_cols=125 Identities=30% Similarity=0.604 Sum_probs=117.5
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
+..+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 21 ~~~a~~RL~kEl~~l~~-~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 21 HGRAYLLLHRDFCDLKE-NNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GCHHHHHHHHHHHHHHH-HCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred ChHHHHHHHHHHHHHHh-CCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 34688999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred e-eCCCcEEeecCC--CCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 112 V-DQYGNICLDILQ--DKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 112 I-~~~G~icl~~l~--~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
| +.+|.||+++|. ++|+|+++|++||.+|+++|.+|++.++.+.+|
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~ea 148 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEA 148 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHH
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHH
Confidence 9 779999999998 899999999999999999999999876665543
No 24
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.2e-40 Score=248.31 Aligned_cols=124 Identities=35% Similarity=0.591 Sum_probs=116.4
Q ss_pred CHHHHHHHHHHHHHHHhhC---CCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSG---GDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCF 108 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~---~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 108 (159)
+..+.+||++|+++|++ + ++.||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|
T Consensus 6 s~~a~~RL~kEl~~l~~-~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 6 ANIAVQRIKREFKEVLK-SEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CHHHHHHHHHHHHHHHH-CHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHHHh-cCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 35688999999999998 5 5789999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeC-CCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 109 HPNVDQ-YGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 109 HpnI~~-~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||||+. +|.||+++|.++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 133 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAV 133 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHH
Confidence 999995 999999999999999999999999999999999987666554
No 25
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=7.2e-41 Score=256.32 Aligned_cols=126 Identities=41% Similarity=0.642 Sum_probs=113.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCC-------------CCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCC
Q 031457 30 VDTTSVTQRLQKELMSLMMSGGD-------------LGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPF 96 (159)
Q Consensus 30 ~~~~~~~~RL~~El~~l~~~~~~-------------~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~ 96 (159)
.++..+.+||++||++|++ +++ .||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||+
T Consensus 28 ~~~~~a~~RL~kEl~~l~k-~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~ 106 (193)
T 2f4z_A 28 RGTPREQARLLKELADIQQ-LQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 106 (193)
T ss_dssp ----CHHHHHHHHHHHHHH-C----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCCCHHHHHHHHHHHHHHh-CCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCC
Confidence 3455688999999999999 766 79999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccccceeC-CCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 97 KPPQVKFETMCFHPNVDQ-YGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 97 ~pP~v~f~t~i~HpnI~~-~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+||+|+|.|+||||||+. +|.||+++|.+.|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 107 ~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~ 167 (193)
T 2f4z_A 107 NPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAE 167 (193)
T ss_dssp SCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred CCCeEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHH
Confidence 999999999999999995 999999999999999999999999999999999997666554
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=5.2e-41 Score=261.01 Aligned_cols=124 Identities=39% Similarity=0.668 Sum_probs=117.8
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPN 111 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 111 (159)
...+.+||++||++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+|||||
T Consensus 21 ~s~a~~RL~kEl~~l~~-~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 21 GSKELLRLQKELKDIEN-ENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp SCHHHHHHHHHHHHHHH-SCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cCHHHHHHHHHHHHHHh-CCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 45688999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeC-CCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 112 VDQ-YGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 112 I~~-~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|+. +|.||+++|.+.|+|++||++||.+|+++|.+|+|.++.+++
T Consensus 100 I~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~e 145 (216)
T 2pwq_A 100 ISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAE 145 (216)
T ss_dssp BCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred CcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHH
Confidence 995 999999999989999999999999999999999997766544
No 27
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.9e-40 Score=246.73 Aligned_cols=123 Identities=33% Similarity=0.552 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEEeecC-----CCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccc
Q 031457 33 TSVTQRLQKELMSLMMSGGDLGVSAFPEG-----ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 107 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~~~~i~~~~~~-----~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 107 (159)
..+.+||++|+++|++ ++++||++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 3 ~~a~~RL~kE~~~l~~-~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 81 (157)
T 2gjd_A 3 SLCLQRLQEERKKWRK-DHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGF 81 (157)
T ss_dssp CHHHHHHHHHHHHHHH-CCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTC
T ss_pred hHHHHHHHHHHHHHHh-CCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCC
Confidence 4678999999999999 999999998874 4899999999999999999999999999999999999999999999
Q ss_pred cccceeCCCcEEeecCCC--CCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 108 FHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 108 ~HpnI~~~G~icl~~l~~--~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|||||+.+|.||+++|.+ +|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 82 ~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 132 (157)
T 2gjd_A 82 YHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEP 132 (157)
T ss_dssp CCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHH
T ss_pred ccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHH
Confidence 999999999999999986 7999999999999999999999986665543
No 28
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.9e-40 Score=246.17 Aligned_cols=121 Identities=26% Similarity=0.508 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEE-eecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccce
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSA-FPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNV 112 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~-~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI 112 (159)
.+.+||++|+++|++ ++++||++ .+.++|+++|+++|. |++|||+||.|+|+|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~RL~kEl~~l~~-~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV 81 (155)
T 1wzv_A 4 MASMRVVKELEDLQK-KPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNV 81 (155)
T ss_dssp -CHHHHHHHHHHHHH-SCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHh-CCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcC
Confidence 578999999999999 99999999 788899999999999 999999999999999999999999999999999999999
Q ss_pred eCCCcEEeecC-CCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 113 DQYGNICLDIL-QDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 113 ~~~G~icl~~l-~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+.+|.||+++| .++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 82 ~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 126 (155)
T 1wzv_A 82 DENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMD 126 (155)
T ss_dssp CTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHH
T ss_pred CCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHH
Confidence 99999999999 899999999999999999999999986665543
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.1e-40 Score=254.41 Aligned_cols=123 Identities=35% Similarity=0.594 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHhhC---CCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccc
Q 031457 33 TSVTQRLQKELMSLMMSG---GDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFH 109 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~---~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 109 (159)
..+.+||++||++|++ + ++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 4 ~~a~~Rl~kEl~~l~~-~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 82 (201)
T 3k9o_A 4 NIAVQRIKREFKEVLK-SEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 82 (201)
T ss_dssp CTTHHHHHHHHHHHHT-CHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHHHHh-CCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCccc
Confidence 4578999999999998 6 36899999999999999999999999999999999999999999999999999999999
Q ss_pred cceeC-CCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 110 PNVDQ-YGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 110 pnI~~-~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|||+. +|.||+++|.++|+|+++|++||.+|+++|.+|||.++.+.+
T Consensus 83 Pnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~ 130 (201)
T 3k9o_A 83 PNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAV 130 (201)
T ss_dssp TTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred CCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHH
Confidence 99996 999999999999999999999999999999999997776654
No 30
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4.5e-40 Score=245.61 Aligned_cols=124 Identities=35% Similarity=0.586 Sum_probs=115.3
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecC-----CCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEG-----ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETM 106 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~-----~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 106 (159)
+..+.+||++|+++|++ ++++||.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.++
T Consensus 5 ~~~a~~RL~kE~~~l~~-~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 5 SGIALSRLAQERKAWRK-DHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CHHHHHHHHHHHHHHHH-SCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred cHHHHHHHHHHHHHHHh-CCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 45688999999999999 999999998763 689999999999999999999999999999999999999999999
Q ss_pred ccccceeCCCcEEeecCCC--CCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 107 CFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 107 i~HpnI~~~G~icl~~l~~--~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+|||||+.+|.||+++|.+ +|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 84 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 135 (161)
T 2grr_A 84 LFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAE 135 (161)
T ss_dssp CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred cccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHH
Confidence 9999999999999999975 8999999999999999999999986665543
No 31
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.4e-40 Score=248.39 Aligned_cols=124 Identities=23% Similarity=0.409 Sum_probs=114.5
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCCCeEEe-ecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccc
Q 031457 29 TVDTTSVTQRLQKELMSLMMSGGDLGVSAF-PEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 107 (159)
Q Consensus 29 ~~~~~~~~~RL~~El~~l~~~~~~~~i~~~-~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 107 (159)
...+..+.+||++||++| . +++||++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 21 ~~~~~~~~~RL~kEl~~l-~--~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i 96 (180)
T 2nvu_C 21 SKKASAAQLRIQKDINEL-N--LPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV 96 (180)
T ss_dssp CCSCCHHHHHHHHHHHTC-C--CCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCC
T ss_pred cCCccHHHHHHHHHHHhc-C--CCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccC
Confidence 444667899999999999 3 57899998 7889999999998 99999999999999999999999999999999999
Q ss_pred cccceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 108 FHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 108 ~HpnI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|||||+.+|.||+++|.++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 97 ~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~ 145 (180)
T 2nvu_C 97 YHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKE 145 (180)
T ss_dssp CBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHH
T ss_pred ccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHH
Confidence 9999999999999999999999999999999999999999987665543
No 32
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.5e-39 Score=257.85 Aligned_cols=124 Identities=35% Similarity=0.591 Sum_probs=117.4
Q ss_pred CHHHHHHHHHHHHHHHhhC---CCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSG---GDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCF 108 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~---~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 108 (159)
+..+.+||++||++|++ + ++.||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+||
T Consensus 55 s~~a~~RL~kEl~~l~~-~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLK-SEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CHHHHHHHHHHHHHHHH-CHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHHh-CCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 56789999999999998 6 4789999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeC-CCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 109 HPNVDQ-YGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 109 HpnI~~-~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||||+. +|.||+++|.++|+|+++|++||.+|+++|.+|||.++.+.+
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~e 182 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAV 182 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHH
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHH
Confidence 999995 999999999999999999999999999999999997776654
No 33
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=3.8e-39 Score=240.15 Aligned_cols=125 Identities=26% Similarity=0.328 Sum_probs=113.7
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCC-eEEeec-CCC--cceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLG-VSAFPE-GES--IFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 107 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~-i~~~~~-~~n--~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 107 (159)
...+.+||++|+++|++ ++++| +++.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 23 ~~p~~~RL~kEl~~l~~-~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 101 (160)
T 2a4d_A 23 KVPRNFRLLEELEEGQK-GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 101 (160)
T ss_dssp CHHHHHHHHHHHHHHHS-CCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred echHHHHHHHHHHHHHh-CCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCc
Confidence 47789999999999999 88887 788774 454 89999999999999999999999999999999999999999999
Q ss_pred ccccee-CCCcEEeecCC--CCCCCcCCHHHHHHHHHHHHh-CCCCCCCcCCCC
Q 031457 108 FHPNVD-QYGNICLDILQ--DKWSSAYDCRTILLSIQSLLG-GLLVLPCMIGHT 157 (159)
Q Consensus 108 ~HpnI~-~~G~icl~~l~--~~W~p~~ti~~il~~i~~ll~-~P~~~~~~~~~~ 157 (159)
|||||+ .+|+||+++|. ++|+|+++|++||.+|+++|. +||+.++.+.+|
T Consensus 102 ~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~ea 155 (160)
T 2a4d_A 102 NMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 155 (160)
T ss_dssp CCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTT
T ss_pred eeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhh
Confidence 999999 59999999997 899999999999999999995 689866666655
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=243.20 Aligned_cols=121 Identities=25% Similarity=0.448 Sum_probs=112.5
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEe-ecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAF-PEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHP 110 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~-~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 110 (159)
+..+.+||++|+++| + +++||++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~~~~~~RL~kEl~~l-~--~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL-N--LPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 79 (160)
T ss_dssp CCHHHHHHHHHHHTC-C--CCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred ccHHHHHHHHHHHhc-C--CCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccC
Confidence 356889999999999 3 57899998 7889999999988 99999999999999999999999999999999999999
Q ss_pred ceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 111 NVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 111 nI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
||+.+|.||+++|.++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~ 125 (160)
T 1y8x_A 80 NIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKE 125 (160)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHH
T ss_pred cCCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHH
Confidence 9999999999999999999999999999999999999987665544
No 35
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.6e-39 Score=240.31 Aligned_cols=126 Identities=30% Similarity=0.390 Sum_probs=114.3
Q ss_pred CCCHHHHHHHHHHHHHHHhhC-CCCCeEEeecC-C--CcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccc
Q 031457 30 VDTTSVTQRLQKELMSLMMSG-GDLGVSAFPEG-E--SIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFET 105 (159)
Q Consensus 30 ~~~~~~~~RL~~El~~l~~~~-~~~~i~~~~~~-~--n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 105 (159)
.....+.+||++||++|++ + +++||++.+.. + |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|
T Consensus 17 ~~~~~~~~RL~kEl~~l~~-~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t 95 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQK-GNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT 95 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHC-C-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred cccchHHHHHHHHHHHHHh-CCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc
Confidence 4456788999999999999 7 78899998853 3 5999999999999999999999999999999999999999999
Q ss_pred cccccceeCCCcE---EeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 106 MCFHPNVDQYGNI---CLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 106 ~i~HpnI~~~G~i---cl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
+||||||+.+|+| |+++|. .|+|+++|++||.+|+++|.+|++.++.+.+|
T Consensus 96 ~i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~a 149 (156)
T 2q0v_A 96 KIEMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNE 149 (156)
T ss_dssp CCCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCT
T ss_pred ccccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHH
Confidence 9999999999999 888886 59999999999999999999999865555544
No 36
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.5e-39 Score=244.04 Aligned_cols=127 Identities=21% Similarity=0.344 Sum_probs=115.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCCeEEeec-CCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccc
Q 031457 28 NTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPE-GESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETM 106 (159)
Q Consensus 28 ~~~~~~~~~~RL~~El~~l~~~~~~~~i~~~~~-~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 106 (159)
.......+.+||++||++|++ ++++||++.+. ++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 8 ~~~~~s~~~~RL~kEl~~l~~-~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 85 (167)
T 3fn1_B 8 STRRVSVRDKLLVKEVAELEA-NLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTK 85 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHGG-GSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSC
T ss_pred CccchhHHHHHHHHHHHHHHh-CCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCC
Confidence 344566889999999999999 99999999865 67899999998 8999999999999999999999999999999999
Q ss_pred ccccceeCCCcEEeecCCC------CCCCcCCHHHHHHHHHHHHhC-CCCCCCcCCC
Q 031457 107 CFHPNVDQYGNICLDILQD------KWSSAYDCRTILLSIQSLLGG-LLVLPCMIGH 156 (159)
Q Consensus 107 i~HpnI~~~G~icl~~l~~------~W~p~~ti~~il~~i~~ll~~-P~~~~~~~~~ 156 (159)
+|||||+.+|+||+++|.. +|+|+++|++||.+|+++|.+ ||+.++.+.+
T Consensus 86 i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~e 142 (167)
T 3fn1_B 86 IWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIE 142 (167)
T ss_dssp CCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHH
T ss_pred cccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHH
Confidence 9999999999999999974 799999999999999999999 6876655543
No 37
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=237.26 Aligned_cols=109 Identities=41% Similarity=0.729 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEe--ecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccc--ccc
Q 031457 36 TQRLQKELMSLMMSGGDLGVSAF--PEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCF--HPN 111 (159)
Q Consensus 36 ~~RL~~El~~l~~~~~~~~i~~~--~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~--Hpn 111 (159)
.+||++|+++|++ ++++||++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.+++| |||
T Consensus 24 ~~RL~kEl~~l~~-~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPN 102 (136)
T 2a7l_A 24 QKRLQKELLALQN-DPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPH 102 (136)
T ss_dssp CHHHHHHHHHHHH-SCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTT
T ss_pred HHHHHHHHHHHHh-CCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCcc
Confidence 3999999999999 999999965 77899999999999999999999999999999999999999999999999 999
Q ss_pred eeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHh
Q 031457 112 VDQYGNICLDILQDKWSSAYDCRTILLSIQSLLG 145 (159)
Q Consensus 112 I~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~ 145 (159)
|+.+|+||+++|.++|+|+++|++||.+|+++|.
T Consensus 103 V~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 103 VYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999984
No 38
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=241.56 Aligned_cols=125 Identities=26% Similarity=0.332 Sum_probs=112.4
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCC-eEEeec-CCC--cceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLG-VSAFPE-GES--IFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMC 107 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~-i~~~~~-~~n--~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 107 (159)
...+.+||++||++|++ ++++| +++.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 33 ~~p~~~RL~kEl~~l~~-~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 111 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQK-GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111 (170)
T ss_dssp CCCHHHHHHHHHHHHHH-CCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCC
T ss_pred cCHHHHHHHHHHHHHHh-CCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccc
Confidence 35678999999999999 88888 677764 454 89999999999999999999999999999999999999999999
Q ss_pred ccccee-CCCcEEeecCC--CCCCCcCCHHHHHHHHHHHHhC-CCCCCCcCCCC
Q 031457 108 FHPNVD-QYGNICLDILQ--DKWSSAYDCRTILLSIQSLLGG-LLVLPCMIGHT 157 (159)
Q Consensus 108 ~HpnI~-~~G~icl~~l~--~~W~p~~ti~~il~~i~~ll~~-P~~~~~~~~~~ 157 (159)
|||||+ .+|.||+++|. +.|+|++||++||.+|+++|.+ ||+.++.+.+|
T Consensus 112 ~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~ea 165 (170)
T 2hlw_A 112 NMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 165 (170)
T ss_dssp CCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSC
T ss_pred ccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCccc
Confidence 999999 69999999997 8999999999999999999984 88765555554
No 39
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.2e-39 Score=237.67 Aligned_cols=125 Identities=26% Similarity=0.340 Sum_probs=110.4
Q ss_pred CCHHHHHHHHHHHHHHHhhC-CCCCeEEeecC-C--CcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccc
Q 031457 31 DTTSVTQRLQKELMSLMMSG-GDLGVSAFPEG-E--SIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETM 106 (159)
Q Consensus 31 ~~~~~~~RL~~El~~l~~~~-~~~~i~~~~~~-~--n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 106 (159)
+...+.+||++|+++|++ + ++.||++.+.. + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 3 ~~~~~~~RL~kEl~~l~~-~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 3 SKVPRNFRLLEELEKGEK-GFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp CCCCHHHHHHHHHHHHHC-----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred chHHHHHHHHHHHHHHHh-cCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 345678999999999999 7 78899998853 3 48999999999999999999999999999999999999999999
Q ss_pred ccccceeCC-CcE--EeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 107 CFHPNVDQY-GNI--CLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 107 i~HpnI~~~-G~i--cl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
+|||||+.+ |.| |+++|. +|+|+++|++||.+|+++|.+|++.++.+.++
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~ 134 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKE 134 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCT
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcch
Confidence 999999995 999 899886 89999999999999999999999855555444
No 40
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2.6e-40 Score=256.87 Aligned_cols=122 Identities=33% Similarity=0.576 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEeecCC-CcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccce
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSAFPEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNV 112 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~~~~~~-n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI 112 (159)
++.+||++|+++|++ ++++||++.+.++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 2 ~a~~RL~kEl~~l~~-~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 80 (215)
T 1tte_A 2 SRAKRIMKEIQAVKD-DPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 (215)
T ss_dssp TTHHHHHHHHHHHHT-TTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSS
T ss_pred hHHHHHHHHHHHHHh-CCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcC
Confidence 367999999999999 9999999999876 45699999999999999999999999999999999999999999999999
Q ss_pred eC-CCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 113 DQ-YGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 113 ~~-~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+. +|.||+++|.+.|+|++||.+||.+|+++|.+|++.++.+++
T Consensus 81 ~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~e 125 (215)
T 1tte_A 81 SSVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAE 125 (215)
T ss_dssp CSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHH
T ss_pred cCCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHH
Confidence 99 999999999999999999999999999999999987665544
No 41
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=5.9e-39 Score=241.89 Aligned_cols=125 Identities=24% Similarity=0.460 Sum_probs=112.7
Q ss_pred CHHHHHHHHHHHHHHHhhC-C------CC---CeEEee-cCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCc
Q 031457 32 TTSVTQRLQKELMSLMMSG-G------DL---GVSAFP-EGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQ 100 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~-~------~~---~i~~~~-~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~ 100 (159)
+..+.+||++||++|++++ + +. ++.+.+ .++|+++|+++|.||++|||+||.|+|+|.||++||++||+
T Consensus 4 s~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~ 83 (172)
T 2y9m_A 4 ADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPK 83 (172)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred cHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCE
Confidence 4578899999999999833 2 32 466777 78899999999999999999999999999999999999999
Q ss_pred ccccc-ccccccee-CCCcEEeecCC-CCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 101 VKFET-MCFHPNVD-QYGNICLDILQ-DKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 101 v~f~t-~i~HpnI~-~~G~icl~~l~-~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
|+|.| +||||||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 84 v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~ 142 (172)
T 2y9m_A 84 ISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVD 142 (172)
T ss_dssp EEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHH
T ss_pred EEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHH
Confidence 99999 99999997 69999999998 89999999999999999999999987665543
No 42
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-38 Score=241.74 Aligned_cols=127 Identities=28% Similarity=0.419 Sum_probs=107.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccc
Q 031457 26 SPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFET 105 (159)
Q Consensus 26 ~~~~~~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 105 (159)
.+....+..+.+||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.+
T Consensus 6 ~~~~~~~~~a~~RL~kEl~~l~~-~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T 84 (187)
T 2f4w_A 6 TSSKRAPTTATQRLKQDYLRIKK-DPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT 84 (187)
T ss_dssp --------CHHHHHHHHHHHHHH-SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred cCCCCCccHHHHHHHHHHHHHHh-CCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccC
Confidence 33345567789999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeCCCcEEeecC---CCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCC
Q 031457 106 MCFHPNVDQYGNICLDIL---QDKWSSAYDCRTILLSIQSLLGGLLVLPCMIG 155 (159)
Q Consensus 106 ~i~HpnI~~~G~icl~~l---~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~ 155 (159)
+ ||||+.+|+||+++| .+.|+|+++|.+||.+|+++|.+|+|..+.+.
T Consensus 85 ~--~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~ 135 (187)
T 2f4w_A 85 P--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIE 135 (187)
T ss_dssp C--CSSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCC
T ss_pred C--CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccc
Confidence 9 999999999999999 68999999999999999999999999755443
No 43
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=3.7e-39 Score=238.99 Aligned_cols=121 Identities=26% Similarity=0.608 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEee-cCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccce
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSAFP-EGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNV 112 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~~~-~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI 112 (159)
++.+||++|+++|++ ++++|+.+.+ .++|+++|+++|. |++|||+||.|+|+|.||++||++||+|+|.|++|||||
T Consensus 2 ~a~~RL~kEl~~l~~-~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 79 (154)
T 1c4z_D 2 AASRRLMKELEEIRK-CGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNI 79 (154)
T ss_dssp --CTTHHHHHTTCSS-SCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred cHHHHHHHHHHHHHh-CCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccC
Confidence 356899999999999 8889998654 5789999999998 999999999999999999999999999999999999999
Q ss_pred eCCCcEEeecCC-CCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCC
Q 031457 113 DQYGNICLDILQ-DKWSSAYDCRTILLSIQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 113 ~~~G~icl~~l~-~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~ 156 (159)
+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++.++.+.+
T Consensus 80 ~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~ 124 (154)
T 1c4z_D 80 DEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRAD 124 (154)
T ss_dssp CTTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHH
T ss_pred CCCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHH
Confidence 999999999996 89999999999999999999999986665543
No 44
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.3e-39 Score=241.00 Aligned_cols=119 Identities=28% Similarity=0.488 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccceeC
Q 031457 35 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQ 114 (159)
Q Consensus 35 ~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~~ 114 (159)
+.+||++|+++|++ . |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~Rl~kEl~~l~~-~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 3 SLTRKQCDFTKLIM-A---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp CCCHHHHTHHHHHH-H---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHhcCc-C---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 45899999999997 4 6788888999999999999999999999999999999999999999999999999999995
Q ss_pred -CCcEEeecCCCCCCCcCCHHHHHHH-HHHHHhCCCCCCCcCCCC
Q 031457 115 -YGNICLDILQDKWSSAYDCRTILLS-IQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 115 -~G~icl~~l~~~W~p~~ti~~il~~-i~~ll~~P~~~~~~~~~~ 157 (159)
+|.||+++|.++|+|+++|++||.+ |++||.+|++.++.+.+|
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~a 123 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDA 123 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHH
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHH
Confidence 9999999999999999999999999 689999999877665543
No 45
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=6.5e-38 Score=263.01 Aligned_cols=124 Identities=39% Similarity=0.648 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccce
Q 031457 33 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNV 112 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI 112 (159)
..+.|||++|+++|++ ++++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~a~~RL~kEl~~l~~-~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 80 (399)
T 4ddg_A 2 AMALKRIHKELNDLAR-DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 80 (399)
T ss_dssp HHHHHHHHHHHHHHHH-SCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHh-CCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccccccc
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 113 DQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 113 ~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
+.+|.||+++|.++|+|++||++||.+|+++|.+|||.++.+.++
T Consensus 81 ~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~a 125 (399)
T 4ddg_A 81 NSNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 125 (399)
T ss_dssp CTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHH
T ss_pred CCCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHH
Confidence 999999999999999999999999999999999999977766543
No 46
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=4.7e-38 Score=240.27 Aligned_cols=126 Identities=26% Similarity=0.362 Sum_probs=115.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCCeEEe----ecCCCcc---eEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCc
Q 031457 28 NTVDTTSVTQRLQKELMSLMMSGGDLGVSAF----PEGESIF---TWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQ 100 (159)
Q Consensus 28 ~~~~~~~~~~RL~~El~~l~~~~~~~~i~~~----~~~~n~~---~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~ 100 (159)
.......+.+||++||++|+ +++|+++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+
T Consensus 23 ~~~~~s~a~~RL~kEl~~l~---~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~ 98 (190)
T 3o2u_A 23 IQPNLSAARIRLKRDLDSLD---LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPK 98 (190)
T ss_dssp SSCCCCHHHHHHHHHHHTCC---CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCE
T ss_pred CCCCccHHHHHHHHHHHhcc---CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCce
Confidence 34456688999999999998 56899997 7889999 9999997 788999999999999999999999999
Q ss_pred ccccccccccceeCCCcEEeecCCCCCCCcCCHHHHHHHHHHHHhCCCCCCCcCCCC
Q 031457 101 VKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGGLLVLPCMIGHT 157 (159)
Q Consensus 101 v~f~t~i~HpnI~~~G~icl~~l~~~W~p~~ti~~il~~i~~ll~~P~~~~~~~~~~ 157 (159)
|+|.|++|||||+.+|.||+++|.++|+|+++|++||.+|+++|.+||+.++.+.+|
T Consensus 99 v~f~t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~a 155 (190)
T 3o2u_A 99 VVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDA 155 (190)
T ss_dssp EEECSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHH
T ss_pred eEEecCcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 999999999999999999999999999999999999999999999999977666543
No 47
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=240.91 Aligned_cols=118 Identities=28% Similarity=0.557 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccccccee
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVD 113 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~ 113 (159)
.+.+||++||++|++ .||++.+. +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+
T Consensus 25 ~a~~RL~kEl~~l~~----~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE----SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp HHHHHHHHHHHHHHH----SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHhcCc----CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 588999999999986 36778776 6789999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeecCCCCCCCcCCHHHHHHH-HHHHHhCCCCCCCcCCC
Q 031457 114 Q-YGNICLDILQDKWSSAYDCRTILLS-IQSLLGGLLVLPCMIGH 156 (159)
Q Consensus 114 ~-~G~icl~~l~~~W~p~~ti~~il~~-i~~ll~~P~~~~~~~~~ 156 (159)
. +|.||+++|.++|+|+++|++||.+ |+++|.+|++.++.+.+
T Consensus 100 ~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~e 144 (179)
T 2z5d_A 100 EASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGD 144 (179)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHH
T ss_pred CCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHH
Confidence 9 9999999999999999999999999 99999999986665543
No 48
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.1e-37 Score=237.59 Aligned_cols=128 Identities=22% Similarity=0.335 Sum_probs=112.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhhCC---CCCeEEeecCCCcceEEEEEecC-CCCCCCC-----------CEEE
Q 031457 21 KQPVSSPNTVDTTSVTQRLQKELMSLMMSGG---DLGVSAFPEGESIFTWIGTIEGG-KGTMYEG-----------LSYK 85 (159)
Q Consensus 21 ~~~~~~~~~~~~~~~~~RL~~El~~l~~~~~---~~~i~~~~~~~n~~~w~v~i~Gp-~~tpyeg-----------g~f~ 85 (159)
.+.....+..++..+.+||++||++|++ ++ +.+|++.+.++|+++|+++|.|| ++|||+| |.|+
T Consensus 14 ~~~~~~g~~~~s~~a~~RL~kEl~~l~~-~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~ 92 (186)
T 1zuo_A 14 LVPRGSGAVSGSVQASDRLMKELRDIYR-SQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYIL 92 (186)
T ss_dssp ----------CCHHHHHHHHHHHHHHHT-SHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEE
T ss_pred cccccCCcccccHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEE
Confidence 3333344455577899999999999999 77 68899999999999999999998 8999998 8999
Q ss_pred EEEeCCCCCCCCCCccccccccccc-ceeCCCcEEeecCC-CCCCCcCCHHHHHHHHHHHHhCCCC
Q 031457 86 LSLRFPLDYPFKPPQVKFETMCFHP-NVDQYGNICLDILQ-DKWSSAYDCRTILLSIQSLLGGLLV 149 (159)
Q Consensus 86 ~~i~fp~~YP~~pP~v~f~t~i~Hp-nI~~~G~icl~~l~-~~W~p~~ti~~il~~i~~ll~~P~~ 149 (159)
|+|.||++||++||+|+|.+++||| ||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++
T Consensus 93 l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a 158 (186)
T 1zuo_A 93 LNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKA 158 (186)
T ss_dssp EEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCCh
Confidence 9999999999999999999999999 69999999999996 7999999999999999999999987
No 49
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=8.4e-38 Score=234.55 Aligned_cols=123 Identities=23% Similarity=0.424 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHhhCC------------CCCeEEeecCCCcceEEEEEecCCCCCCC--CCEEEEEEeCCCCCCCCC
Q 031457 33 TSVTQRLQKELMSLMMSGG------------DLGVSAFPEGESIFTWIGTIEGGKGTMYE--GLSYKLSLRFPLDYPFKP 98 (159)
Q Consensus 33 ~~~~~RL~~El~~l~~~~~------------~~~i~~~~~~~n~~~w~v~i~Gp~~tpye--gg~f~~~i~fp~~YP~~p 98 (159)
..+.+||++|+++|++ ++ ..++.+.+.++|+++|+++|.||++|||+ ||.|+|+|.||++||++|
T Consensus 7 ~~a~kRL~kEl~~l~~-~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~p 85 (167)
T 4ds2_A 7 NISNKRIIKDLKLLLE-EVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEP 85 (167)
T ss_dssp CCCCHHHHHHHHHHHH-HHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSC
T ss_pred HHHHHHHHHHHHHHHh-CcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCC
Confidence 3467999999999998 66 67899999999999999999999999999 999999999999999999
Q ss_pred CcccccccccccceeCCCcEEeecCCCCCCCcCCHHHHHH-HHHHHHhC--CCCCCCcCCC
Q 031457 99 PQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILL-SIQSLLGG--LLVLPCMIGH 156 (159)
Q Consensus 99 P~v~f~t~i~HpnI~~~G~icl~~l~~~W~p~~ti~~il~-~i~~ll~~--P~~~~~~~~~ 156 (159)
|+|+|.|++|||||+.+|.||+++|.++|+|+++++++|. .|++++.+ |++.++.|.+
T Consensus 86 P~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~e 146 (167)
T 4ds2_A 86 PTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPE 146 (167)
T ss_dssp CEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHH
T ss_pred CEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHH
Confidence 9999999999999999999999999999999999999754 67777775 6665554433
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=8e-38 Score=235.45 Aligned_cols=118 Identities=27% Similarity=0.490 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccccccee
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVD 113 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~ 113 (159)
.+.+||++|+++|++ ++ .++ +.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+||||||+
T Consensus 12 ~~~~RL~~El~~l~~-~~-~~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 12 RSNRRREMDYMRLCN-ST-RKV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp -CCHHHHHHHHHHHS-SS-SCE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHh-CC-CCC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 557999999999998 66 344 3578999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeecCCCCCCCcCCHHHHHHHH-HHHHhCCCCCCCcCCC
Q 031457 114 Q-YGNICLDILQDKWSSAYDCRTILLSI-QSLLGGLLVLPCMIGH 156 (159)
Q Consensus 114 ~-~G~icl~~l~~~W~p~~ti~~il~~i-~~ll~~P~~~~~~~~~ 156 (159)
. +|.||+++|.++|+|+++|++||.+| +++|.+|++.++.+.+
T Consensus 87 ~~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~ 131 (171)
T 1yf9_A 87 ERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQ 131 (171)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHH
T ss_pred ccCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHH
Confidence 5 99999999999999999999999998 7999999986665543
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=239.92 Aligned_cols=120 Identities=30% Similarity=0.468 Sum_probs=109.8
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCC----CeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccc
Q 031457 29 TVDTTSVTQRLQKELMSLMMSGGDL----GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFE 104 (159)
Q Consensus 29 ~~~~~~~~~RL~~El~~l~~~~~~~----~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 104 (159)
...+..+.+||++|+++|++ ++++ ++.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.
T Consensus 71 ~~~s~~~~kRL~kEl~~L~k-~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 71 DANSAARARRLAQEAVTLST-SLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHH-HCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHh-CCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 45578899999999999999 7666 455777889999999999999999999999999999999999999999999
Q ss_pred cc-----ccccceeCCCcEEeecCC-------CCCCCcC-CHHHHHHHHHHHHhCCCC
Q 031457 105 TM-----CFHPNVDQYGNICLDILQ-------DKWSSAY-DCRTILLSIQSLLGGLLV 149 (159)
Q Consensus 105 t~-----i~HpnI~~~G~icl~~l~-------~~W~p~~-ti~~il~~i~~ll~~P~~ 149 (159)
|+ +|||||+.+|.||+++|. ++|+|++ ||.+||.+|++||.+++|
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~P 207 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEP 207 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSG
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCC
Confidence 98 999999999999999997 6899999 899999999999974444
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=1.1e-27 Score=177.20 Aligned_cols=102 Identities=19% Similarity=0.333 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCC----------EEEEEEeCCCCCCCCCC
Q 031457 30 VDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGL----------SYKLSLRFPLDYPFKPP 99 (159)
Q Consensus 30 ~~~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP 99 (159)
-+...+.+||++|++.|++ ++.+.++|++.|.+++.||++|+|+|| .|.+++.||++||.+||
T Consensus 28 ~~~~~w~~RL~eE~k~L~k-------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PP 100 (172)
T 2z6o_A 28 RDRELWVQRLKEEYQSLIR-------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAP 100 (172)
T ss_dssp TCTHHHHHHHHHHHHHHHH-------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCC
T ss_pred CccHHHHHHHHHHHHHHHH-------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCC
Confidence 3467789999999999998 467778899999999999999999999 99999999999999999
Q ss_pred ccccccc-ccccceeCCCcEEeecC-CC---CCCCcCCHHHHHH
Q 031457 100 QVKFETM-CFHPNVDQYGNICLDIL-QD---KWSSAYDCRTILL 138 (159)
Q Consensus 100 ~v~f~t~-i~HpnI~~~G~icl~~l-~~---~W~p~~ti~~il~ 138 (159)
+|+|.+. +|||||+.+|+||+++| +. .|+|.++|.++|.
T Consensus 101 eV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 101 EIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp CCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred eeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 9999998 99999999999999999 43 4569999999974
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.81 E-value=1.1e-19 Score=134.97 Aligned_cols=114 Identities=22% Similarity=0.278 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHhhCCCC--CeEEeecCCCcceEEEEEecCCCCCCCCCE---EEEEEeCCCCCCCCCCccccccc-----
Q 031457 37 QRLQKELMSLMMSGGDL--GVSAFPEGESIFTWIGTIEGGKGTMYEGLS---YKLSLRFPLDYPFKPPQVKFETM----- 106 (159)
Q Consensus 37 ~RL~~El~~l~~~~~~~--~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~---f~~~i~fp~~YP~~pP~v~f~t~----- 106 (159)
+|..+|+.++.+..+.. ...+...+|...++.+.+.|.-..+|+|+. |.+.|.||++||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 57778888876523322 223345567777888889998889999998 88999999999999999988551
Q ss_pred -----cc-ccceeCCCcEEeecCCCCCCC-cCCHHHHHHHHHHHHhCCCCCC
Q 031457 107 -----CF-HPNVDQYGNICLDILQDKWSS-AYDCRTILLSIQSLLGGLLVLP 151 (159)
Q Consensus 107 -----i~-HpnI~~~G~icl~~l~~~W~p-~~ti~~il~~i~~ll~~P~~~~ 151 (159)
|+ |||||.+|+||+++|. .|++ +.++.++|.+|+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 9999999999999995 6998 6899999999999999999854
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.76 E-value=1e-19 Score=131.96 Aligned_cols=89 Identities=21% Similarity=0.395 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCC----------EEEEEEeCCCCCCCCCCcc
Q 031457 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGL----------SYKLSLRFPLDYPFKPPQV 101 (159)
Q Consensus 32 ~~~~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v 101 (159)
......||+.||..|-+ +++..+++-..|...+.|++||+|+|+ .|.+++.||.+||..||+|
T Consensus 32 ~~~w~~RlkeEy~alI~-------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI 104 (168)
T 3kpa_A 32 GDKWTARLKEEYASLIT-------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEI 104 (168)
T ss_dssp THHHHHHHHHHHHHHHH-------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHH-------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEe
Confidence 35689999999999998 555555566689999999999999999 9999999999999999999
Q ss_pred ccccc-ccccceeCCCcEEeecCCCCCCCc
Q 031457 102 KFETM-CFHPNVDQYGNICLDILQDKWSSA 130 (159)
Q Consensus 102 ~f~t~-i~HpnI~~~G~icl~~l~~~W~p~ 130 (159)
+|.+. .+|+|++.+|+||++++ |+|.
T Consensus 105 ~Fp~ldgkt~kmYr~GkICLdIh---wkPl 131 (168)
T 3kpa_A 105 ALPELEGKTVKMYRGGKICMTTH---FFPL 131 (168)
T ss_dssp BCGGGTTTCSSEETTTEECCCTT---HHHH
T ss_pred ecccccCcCccccCCCcEEeccc---cchh
Confidence 99995 89999999999999986 6554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.52 E-value=5.2e-14 Score=102.76 Aligned_cols=105 Identities=23% Similarity=0.367 Sum_probs=81.5
Q ss_pred HHHHHHHHHhhCCCCCeEEee---cCCCcceEEEEEecCCCCCCCCCEEEE--EEeCCCCCCCCCCccccccc------c
Q 031457 39 LQKELMSLMMSGGDLGVSAFP---EGESIFTWIGTIEGGKGTMYEGLSYKL--SLRFPLDYPFKPPQVKFETM------C 107 (159)
Q Consensus 39 L~~El~~l~~~~~~~~i~~~~---~~~n~~~w~v~i~Gp~~tpyegg~f~~--~i~fp~~YP~~pP~v~f~t~------i 107 (159)
..+|+..+.+.-+........ ...++..|..+|. .+|+|+.|.+ .|.||++||++||.+ |.++ .
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 456777766512322222211 1357889999998 4899999984 999999999999999 6655 4
Q ss_pred cccceeCCCcEEeecCCCCCCC-cCCHHHHHHHHHHHHhCCCC
Q 031457 108 FHPNVDQYGNICLDILQDKWSS-AYDCRTILLSIQSLLGGLLV 149 (159)
Q Consensus 108 ~HpnI~~~G~icl~~l~~~W~p-~~ti~~il~~i~~ll~~P~~ 149 (159)
+|+|||.+|+||++.|.+ |++ ..+|.+++..|+++|.+.=|
T Consensus 100 ~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~epP 141 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGDEPP 141 (146)
T ss_dssp CBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHHSCS
T ss_pred CCCCCCCCCCEecccccc-cCCCCCCHHHHHHHHHHHHhhCCC
Confidence 899999999999999964 987 78999999999999986544
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.94 E-value=0.037 Score=38.27 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccc
Q 031457 35 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFET 105 (159)
Q Consensus 35 ~~~RL~~El~~l~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 105 (159)
...+...|+..|+. -=+..+.+. .+....+.+.|..-.+..-+.-.+.+.|.||++||..||.|.+..
T Consensus 11 ~~e~q~~EleaL~s-Iy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALES-IYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHH-HCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHH-HccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45667889988886 333444432 223456666666322222234478899999999999999987755
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.68 E-value=0.12 Score=36.05 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEeecC------CCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccc
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSAFPEG------ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETM 106 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~~~~~------~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 106 (159)
....+-..|+..|+. --...+.+.... +....+.+.|.+..+ .-..-.+.+.|.||++||..+|.|.+.+.
T Consensus 10 ~~~e~q~~EleaL~S-IY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 10 QYYEIQCNELEAIRS-IYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHHHT-TSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred chHHHHHHHHHHHHH-HChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 344566778888876 333333322110 124567888873222 21234788999999999999999987653
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.99 E-value=0.13 Score=35.38 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEeecC--CCcceEEEEEecCCCCCC--CCCEEEEEEeCCCCCCCCCCccccccccccccee
Q 031457 38 RLQKELMSLMMSGGDLGVSAFPEG--ESIFTWIGTIEGGKGTMY--EGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVD 113 (159)
Q Consensus 38 RL~~El~~l~~~~~~~~i~~~~~~--~n~~~w~v~i~Gp~~tpy--egg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~ 113 (159)
....|+..|+. -=...+.+.... .....+.+.|..+.+..- ..-.+.+.|.||++||..+|.|.+.+...-+.-.
T Consensus 12 ~~~~EleaL~S-IY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~~L~~~~ 90 (128)
T 2day_A 12 VLPSEVEVLES-IYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQ 90 (128)
T ss_dssp HHHHHHHHHHH-HSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEESSCHHH
T ss_pred HHHHHHHHHHH-HCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCCCCCHHH
Confidence 57788888886 434445443221 134455556652222111 1247889999999999999999877632111100
Q ss_pred CCCcEEeecCCCCC---CCcCCHHHHHHHHHHHHhCCC
Q 031457 114 QYGNICLDILQDKW---SSAYDCRTILLSIQSLLGGLL 148 (159)
Q Consensus 114 ~~G~icl~~l~~~W---~p~~ti~~il~~i~~ll~~P~ 148 (159)
-..+| +.|.+.| .-.--|.+++..++..|.+-|
T Consensus 91 -~~~L~-~~L~~~~~e~~G~~mif~lv~~lqe~l~~~n 126 (128)
T 2day_A 91 -IHTIL-QVLGHVAKAGLGTAMLYELIEKGKEILSGPS 126 (128)
T ss_dssp -HHHHH-HHHHHHHHHTTTSCCHHHHHHHHHHHHCCCC
T ss_pred -HHHHH-HHHHHHHHHhCCCEEhHHHHHHHHHHHHhcc
Confidence 00111 1122233 222348888888888886543
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=94.55 E-value=0.31 Score=36.32 Aligned_cols=81 Identities=15% Similarity=0.142 Sum_probs=59.4
Q ss_pred HHHHHHHHH--HhhCCCCCeEEeecCCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccccccccceeCC
Q 031457 38 RLQKELMSL--MMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQY 115 (159)
Q Consensus 38 RL~~El~~l--~~~~~~~~i~~~~~~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnI~~~ 115 (159)
+|.+|+.++ .+ +.-.+.++...++.+... .|....++|.++.+||.++|.+...-|.- .
T Consensus 5 ~li~Ei~~iGW~~--------l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~~--~---- 65 (186)
T 3zqs_A 5 SLIEEIGTLGWDK--------LVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPVP--F---- 65 (186)
T ss_dssp SHHHHHHHHCGGG--------EEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSSC--C----
T ss_pred HHHHHHHHhCCce--------eeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCCC--c----
Confidence 567777775 33 222356788888888843 35789999999999999999876665531 1
Q ss_pred CcEEeecCCCCCCCcCCHHHHHHHHHHHHh
Q 031457 116 GNICLDILQDKWSSAYDCRTILLSIQSLLG 145 (159)
Q Consensus 116 G~icl~~l~~~W~p~~ti~~il~~i~~ll~ 145 (159)
.-.|++..++.+++.+.+.++.
T Consensus 66 --------~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 --------CASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHHHH
T ss_pred --------ccccCCCccHHHHHHHHHHHHH
Confidence 1379999999999988887765
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.15 E-value=0.45 Score=32.97 Aligned_cols=109 Identities=15% Similarity=0.079 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEeecCC-----CcceEEEEEecCCC-C-CCCCCEEEEEEeCCCCCCCCCCccccccc
Q 031457 34 SVTQRLQKELMSLMMSGGDLGVSAFPEGE-----SIFTWIGTIEGGKG-T-MYEGLSYKLSLRFPLDYPFKPPQVKFETM 106 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i~~~~~~~-----n~~~w~v~i~Gp~~-t-pyegg~f~~~i~fp~~YP~~pP~v~f~t~ 106 (159)
....+...|+..|+. -=...+.+..... ....+.+.|. +.+ . .-..-.+.+.|.||++||..+|.|.+...
T Consensus 10 ~~~e~q~~EleaL~S-IY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~ 87 (137)
T 1ukx_A 10 SYSQRQDHELQALEA-IYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNA 87 (137)
T ss_dssp CHHHHHHHHHHHHHH-HTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEE
T ss_pred chHHHHHHHHHHHHH-HCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEecC
Confidence 445567888888886 3333444322111 1345666665 322 1 11124689999999999999999987432
Q ss_pred ccccceeCC--CcEEeecCCCCCC---CcCCHHHHHHHHHHHHhCCC
Q 031457 107 CFHPNVDQY--GNICLDILQDKWS---SAYDCRTILLSIQSLLGGLL 148 (159)
Q Consensus 107 i~HpnI~~~--G~icl~~l~~~W~---p~~ti~~il~~i~~ll~~P~ 148 (159)
. ++... -.+| +.|.+.|. -.--|.+++..++..|.+=+
T Consensus 88 ~---~L~~~~~~~L~-~~L~~~~~e~~G~~mif~lv~~lqe~l~~~~ 130 (137)
T 1ukx_A 88 K---GLSNESVNLLK-SHLEELAKKQCGEVMIFELAHHVQSFLSEHN 130 (137)
T ss_dssp E---SSSSSHHHHHH-HHHHHHHHHHTTSCCHHHHHHHHHHHHHHHC
T ss_pred C---CCCHHHHHHHH-HHHHHHHHHhCCCEEhHHHHHHHHHHHHhcC
Confidence 1 11110 0111 11222332 22347888888888877544
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.37 E-value=0.2 Score=34.48 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhC-CC-CCeEEeec-CCCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCcccccc
Q 031457 38 RLQKELMSLMMSG-GD-LGVSAFPE-GESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFET 105 (159)
Q Consensus 38 RL~~El~~l~~~~-~~-~~i~~~~~-~~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 105 (159)
....|+..|+. - +. ..+.+... ..+...+.+.|.. .+..-..-.+.+.|.||.+||..+|.|.+.+
T Consensus 11 ~q~~EleaL~S-Iy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAA-IFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHH-HHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHH-HcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 45678888775 2 11 12332111 1224577777763 3211112478999999999999999997764
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.92 E-value=0.71 Score=32.99 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=21.6
Q ss_pred EEEEEEeCCCCCCCCCCccccccc
Q 031457 83 SYKLSLRFPLDYPFKPPQVKFETM 106 (159)
Q Consensus 83 ~f~~~i~fp~~YP~~pP~v~f~t~ 106 (159)
.+.++|.+|.+||..+|.|.....
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987664
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.35 E-value=0.27 Score=35.02 Aligned_cols=24 Identities=21% Similarity=0.588 Sum_probs=21.2
Q ss_pred EEEEEEeCCCCCCCCCCccccccc
Q 031457 83 SYKLSLRFPLDYPFKPPQVKFETM 106 (159)
Q Consensus 83 ~f~~~i~fp~~YP~~pP~v~f~t~ 106 (159)
.+.+.|.+|.+||..||.|.+...
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999987764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=47.65 E-value=15 Score=17.69 Aligned_cols=21 Identities=29% Similarity=0.220 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCe
Q 031457 34 SVTQRLQKELMSLMMSGGDLGV 55 (159)
Q Consensus 34 ~~~~RL~~El~~l~~~~~~~~i 55 (159)
+...||.-|+...+. +++.|.
T Consensus 5 seldrlllelnavqh-nppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQH-NPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhcc-CCCCCC
Confidence 457899999999998 887663
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=32.34 E-value=30 Score=25.84 Aligned_cols=25 Identities=12% Similarity=0.113 Sum_probs=21.5
Q ss_pred CCCEEEEEEeCCCCCCC-----CCCccccc
Q 031457 80 EGLSYKLSLRFPLDYPF-----KPPQVKFE 104 (159)
Q Consensus 80 egg~f~~~i~fp~~YP~-----~pP~v~f~ 104 (159)
+.|.|.|+-.+|--||. +||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46889999999999998 78888776
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=31.21 E-value=1.1e+02 Score=22.18 Aligned_cols=45 Identities=20% Similarity=0.283 Sum_probs=32.9
Q ss_pred CCcceEEEEEecCCCCCCCCCEEEEEEeCCCCCCCCCCccccccccc
Q 031457 62 ESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCF 108 (159)
Q Consensus 62 ~n~~~w~v~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 108 (159)
+...+|.|-+.|+.+.-...-+=++.+.+.+.||. |...+..+-|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 46679999999987654444577788999999974 6666655544
No 67
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=27.72 E-value=1.3e+02 Score=20.99 Aligned_cols=43 Identities=14% Similarity=0.238 Sum_probs=31.9
Q ss_pred cceEE--EEEecCCCCCCC-CCEEEEEEeCCCCCCCCCCccccccccc
Q 031457 64 IFTWI--GTIEGGKGTMYE-GLSYKLSLRFPLDYPFKPPQVKFETMCF 108 (159)
Q Consensus 64 ~~~w~--v~i~Gp~~tpye-gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 108 (159)
...|. |.+.|+.+.... .-.=++.+.+.+.|+ .|...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 36998 888998887654 456678888889887 47777776655
No 68
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=25.65 E-value=85 Score=22.53 Aligned_cols=38 Identities=18% Similarity=-0.022 Sum_probs=26.8
Q ss_pred CcceEEEEEecCCCC-------------CCCCCEEEEEEeCCCCCCCCCCc
Q 031457 63 SIFTWIGTIEGGKGT-------------MYEGLSYKLSLRFPLDYPFKPPQ 100 (159)
Q Consensus 63 n~~~w~v~i~Gp~~t-------------pyegg~f~~~i~fp~~YP~~pP~ 100 (159)
+-.+|+++..|..++ |..-|.++|.+.-+.-.+..-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 445999999986654 56679999988875444544444
No 69
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=21.79 E-value=54 Score=15.73 Aligned_cols=16 Identities=31% Similarity=0.688 Sum_probs=9.5
Q ss_pred CCCCCccccccccccc
Q 031457 95 PFKPPQVKFETMCFHP 110 (159)
Q Consensus 95 P~~pP~v~f~t~i~Hp 110 (159)
|+..|.-.|....|||
T Consensus 4 pmtlpenyfserpyhp 19 (26)
T 2jrw_A 4 PMTLPENYFSERPYHP 19 (26)
T ss_dssp CCCCSSSSCCSSSCCS
T ss_pred ccccchhhcccCCCCC
Confidence 4445555566666775
No 70
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=20.20 E-value=51 Score=21.22 Aligned_cols=13 Identities=31% Similarity=0.552 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHH
Q 031457 34 SVTQRLQKELMSL 46 (159)
Q Consensus 34 ~~~~RL~~El~~l 46 (159)
+-.|||++||+-|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 4578999988754
Done!