Query 031458
Match_columns 159
No_of_seqs 111 out of 325
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 23:14:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e8v_A Possible transglutamina 93.8 0.17 5.7E-06 34.6 5.9 39 45-85 10-48 (82)
2 3irp_X URO-adherence factor A; 93.4 0.32 1.1E-05 42.3 8.5 56 26-86 305-361 (429)
3 3uaf_A TTR-52; beta barrel/san 93.0 0.055 1.9E-06 39.2 2.6 51 26-86 4-57 (117)
4 3kcp_A Cellulosomal-scaffoldin 89.3 0.34 1.2E-05 40.7 4.2 51 26-87 157-208 (321)
5 4ank_A Transthyretin; hormone 86.3 2.1 7.1E-05 32.0 6.5 38 44-82 39-76 (147)
6 1uwy_A Carboxypeptidase M; met 85.8 0.53 1.8E-05 40.4 3.4 44 28-87 297-340 (426)
7 3mn8_A LP15968P; catalytic dom 85.7 0.84 2.9E-05 39.3 4.7 42 28-86 338-379 (435)
8 2boy_A 3-chlorocatechol 1,2-di 84.3 2.2 7.4E-05 34.6 6.2 51 25-85 101-161 (254)
9 2bum_A Protocatechuate 3,4-dio 83.3 1.7 6E-05 34.1 5.2 53 24-85 50-117 (209)
10 1h8l_A Carboxypeptidase GP180 82.1 0.94 3.2E-05 38.0 3.4 44 27-87 301-344 (380)
11 2nsm_A Carboxypeptidase N cata 81.9 1 3.6E-05 38.6 3.7 42 27-86 321-362 (439)
12 3t63_M 3,4-PCD, protocatechuat 81.6 3.5 0.00012 33.1 6.4 53 24-85 75-141 (238)
13 2xsu_A Catechol 1,2 dioxygenas 78.8 3.6 0.00012 34.3 5.8 49 26-84 136-194 (312)
14 3th1_A Chlorocatechol 1,2-diox 78.5 4.1 0.00014 33.1 5.9 52 25-85 98-158 (260)
15 3n9t_A PNPC; phospholipid bind 78.2 3.6 0.00012 34.0 5.6 50 25-85 128-188 (290)
16 1tmx_A Hydroxyquinol 1,2-dioxy 77.9 4.7 0.00016 33.3 6.2 51 25-85 132-191 (293)
17 2bum_B Protocatechuate 3,4-dio 77.4 4.6 0.00016 32.4 5.9 51 24-85 76-142 (241)
18 2azq_A Catechol 1,2-dioxygenas 76.6 5.5 0.00019 33.2 6.3 51 25-85 131-191 (311)
19 3o5u_A Chlorocatechol 1,2-diox 74.4 5.1 0.00017 32.5 5.4 52 25-85 102-163 (257)
20 3t63_A 3,4-PCD, protocatechuat 73.2 5.1 0.00017 31.3 5.0 52 24-85 46-108 (200)
21 3hhy_A 1,2-CTD, catechol 1,2-d 69.0 8.1 0.00028 31.7 5.5 50 25-85 130-190 (280)
22 1dmh_A 1,2-CTD, catechol 1,2-d 61.7 16 0.00056 30.3 6.0 49 26-85 133-194 (311)
23 3iwv_A 5-hydroxyisourate hydro 60.2 15 0.00052 27.0 5.0 39 44-82 35-73 (138)
24 1f86_A Transthyretin Thr119Met 50.6 30 0.001 24.5 5.1 39 44-83 10-48 (115)
25 1oo2_A Transthyretin; retinol- 49.7 29 0.00099 24.8 4.9 38 44-82 11-48 (119)
26 3qva_A Transthyretin-like prot 46.4 30 0.001 24.7 4.5 32 45-82 20-51 (116)
27 2g2n_A Transthyretin-like prot 45.7 33 0.0011 24.3 4.7 38 44-83 13-50 (114)
28 2h4e_A Transthyretin; amyloid, 42.2 47 0.0016 24.0 5.1 39 44-83 19-57 (127)
29 2pz4_A Protein GBS052; SPAB, G 36.9 64 0.0022 24.9 5.6 41 46-86 28-86 (239)
30 3kpt_A Collagen adhesion prote 30.1 52 0.0018 27.1 4.2 39 47-87 263-305 (355)
31 3kpt_A Collagen adhesion prote 29.6 88 0.003 25.7 5.5 36 47-86 19-55 (355)
32 1x68_A FHL5 protein; four-and- 27.6 27 0.00092 21.8 1.6 16 27-42 51-66 (76)
33 3jts_B Beta-2-microglobulin; a 27.1 1.4E+02 0.0049 20.3 5.6 25 76-100 77-106 (119)
34 1nkg_A Rhamnogalacturonase B; 24.2 96 0.0033 27.3 5.0 40 27-84 258-297 (508)
35 1f00_I Intimin; immunoglobulin 23.4 1.9E+02 0.0065 23.3 6.3 51 23-87 17-67 (282)
36 1cwv_A Invasin; integrin-bindi 22.8 2.3E+02 0.0079 24.4 7.1 53 23-87 24-76 (492)
37 2bp3_A Filamin A; structural p 21.7 1.3E+02 0.0043 19.6 4.2 30 55-86 49-78 (97)
38 3rgh_A Filamin-A; cell adhesio 21.7 1.5E+02 0.0052 19.5 4.7 33 52-86 50-82 (100)
39 2ds4_A Tripartite motif protei 21.5 1.5E+02 0.0051 19.4 4.7 32 53-86 63-94 (113)
40 3flo_A DNA polymerase alpha su 20.4 1.3E+02 0.0044 26.1 5.0 17 23-39 45-61 (460)
No 1
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=93.78 E-value=0.17 Score=34.58 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=31.8
Q ss_pred CCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEEe
Q 031458 45 PATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILV 85 (159)
Q Consensus 45 ~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l 85 (159)
...+|.+||+|.++=-|- . ...-...-.||++|+|.+..
T Consensus 10 ~~GkPV~gA~Vefe~yNy-a-e~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 10 AEGQPVADATVEFKVYNY-A-EFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp TTSCBCTTCEEEEEEEET-T-EEEEEEEEECCTTSEEEEEC
T ss_pred CCCCCCCCCEEEEEEEEc-h-heeEEEEEEECCCceEEEEE
Confidence 346899999999999987 2 33335778999999999998
No 2
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=93.36 E-value=0.32 Score=42.31 Aligned_cols=56 Identities=23% Similarity=0.273 Sum_probs=43.9
Q ss_pred CeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEE-ec
Q 031458 26 PFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKIL-VS 86 (159)
Q Consensus 26 ~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~-l~ 86 (159)
...|.|+||-|.=+.|-....-.+|+|++|.|. +. ++.+. ...+||++|+|... |+
T Consensus 305 ~~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~--d~-~G~~v--~tttTd~~G~Y~F~~L~ 361 (429)
T 3irp_X 305 FGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLL--DP-TGIRL--ATTTTDITGHYNFDNLT 361 (429)
T ss_dssp EEEEEEEEEECTTSSSSSCCSSCBCTTCEEEEE--CT-TSCEE--EEEECCTTSEEEEEEEE
T ss_pred eEEEccEEEEeCCCCCCcCcCCCCcCCeEEEEE--cC-CCCEE--EEEEeCCCCeEEeCCCC
Confidence 378999999998666666566689999999997 43 45543 67899999999986 44
No 3
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=92.99 E-value=0.055 Score=39.20 Aligned_cols=51 Identities=10% Similarity=0.070 Sum_probs=32.3
Q ss_pred CeEEEEEEEcccCCCCCCCCCcccc--CCCEEEEEecCCCC-ceEEEEEEEEcCCCceEEEEec
Q 031458 26 PFSVEGRVYCDTCQAGFETPATTYI--AGAKVKVECKDRKS-MQVVYSREGKTDSTGTYKILVS 86 (159)
Q Consensus 26 ~~~V~G~VyCd~C~~g~~t~~~~pi--~GA~V~v~C~~~~~-~~v~~~~~~~TD~~G~F~i~l~ 86 (159)
.+.|.|+..|. ..|- .+++|+|-=.+... ..-..-.+..||++|+|.|.-.
T Consensus 4 sV~V~G~L~C~----------~~Pa~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G~ 57 (117)
T 3uaf_A 4 CLMATGVLKCP----------TDPEAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTGC 57 (117)
T ss_dssp EEEEEEEEECT----------TCGGGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEEE
T ss_pred EEEEEEEEEeC----------CccCCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEEE
Confidence 48999999994 2464 46666654211100 0011236889999999999864
No 4
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=89.33 E-value=0.34 Score=40.73 Aligned_cols=51 Identities=27% Similarity=0.245 Sum_probs=37.7
Q ss_pred CeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEE-EecC
Q 031458 26 PFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKI-LVSE 87 (159)
Q Consensus 26 ~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i-~l~~ 87 (159)
...|.|+|.++-= ..++...+.=.|++|.|.=.+. .++||++|||+| .+|.
T Consensus 157 ~~~vsGYi~~~~~--~~~~~~~~~~~G~~V~i~gt~~---------sa~tD~~G~f~I~~vp~ 208 (321)
T 3kcp_A 157 GYKVSGYILPDFS--FDATVAPLVKAGFKVEIVGTEL---------YAVTDANGYFEITGVPA 208 (321)
T ss_dssp SEEEEEEEEESSC--CCTTTHHHHHSCCEEEETTSSC---------EEECCTTSEEEEEEECC
T ss_pred CceEEEEEccccc--cccccchhccCCcEEEEEeccc---------eeEECCCceEEEeccCC
Confidence 3789999999742 2223445778999999975542 689999999999 4763
No 5
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=86.30 E-value=2.1 Score=32.04 Aligned_cols=38 Identities=18% Similarity=0.054 Sum_probs=28.5
Q ss_pred CCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEE
Q 031458 44 TPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYK 82 (159)
Q Consensus 44 t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~ 82 (159)
+....|-+|..|+|.=.+.+ +.-..-.++.||++|...
T Consensus 39 t~~G~PA~gv~V~L~~~~~~-~~~~~l~~~~Td~DGR~~ 76 (147)
T 4ank_A 39 AVRGSPAINVAVHVFRKAAD-DTWEPFASGKTSESGELH 76 (147)
T ss_dssp TTTTEECCSCEEEEEEECTT-SCEEEEEEEECCTTSEEC
T ss_pred CCCCcCCCCCEEEEEEECCC-CCeEEEEEEEeCCCCCCC
Confidence 34568999999999877653 333445799999999865
No 6
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=85.79 E-value=0.53 Score=40.40 Aligned_cols=44 Identities=23% Similarity=0.406 Sum_probs=31.4
Q ss_pred EEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEEecC
Q 031458 28 SVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSE 87 (159)
Q Consensus 28 ~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~~ 87 (159)
.|.|.|. | ....||+||.|.|+=.+. + ....||++|.|.+.++.
T Consensus 297 ~I~G~V~-D--------~~g~pi~gA~V~v~g~~~--~-----~~~~Td~~G~y~~~l~~ 340 (426)
T 1uwy_A 297 GVKGQVF-D--------QNGNPLPNVIVEVQDRKH--I-----CPYRTNKYGEYYLLLLP 340 (426)
T ss_dssp SEEEEEE-C--------TTSCBCCSCEEEETTCCC--S-----SCCBCCTTCEEEECCCS
T ss_pred eeEEEEE-C--------CCCCccCceEEEEEeccc--c-----ceeEeCCCCEEEeccCC
Confidence 6999996 2 123699999999964332 1 13589999999987653
No 7
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=85.72 E-value=0.84 Score=39.34 Aligned_cols=42 Identities=29% Similarity=0.328 Sum_probs=30.2
Q ss_pred EEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEEec
Q 031458 28 SVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVS 86 (159)
Q Consensus 28 ~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~ 86 (159)
.|.|.|. |. ...||+||+|.|. +. +. ...+||++|.|.+.++
T Consensus 338 gv~G~V~-D~--------~G~pi~gA~V~v~--g~-~~-----~~~~Td~~G~y~~~l~ 379 (435)
T 3mn8_A 338 GIKGLVT-DA--------SGFPIADANVYVA--GL-EE-----KPMRTSKRGEYWRLLT 379 (435)
T ss_dssp SEEEEEE-CS--------SSCBCTTCEEEET--TC-TT-----SCEECCTTCEEEECCC
T ss_pred eeEEEEE-CC--------CCCccCceEEEEe--cc-cc-----cceEeCCCCeEEEecC
Confidence 5999997 21 2359999999993 31 01 1358999999988765
No 8
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=84.35 E-value=2.2 Score=34.64 Aligned_cols=51 Identities=14% Similarity=0.188 Sum_probs=35.5
Q ss_pred CCeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEE----------EEEEEEcCCCceEEEEe
Q 031458 25 KPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVV----------YSREGKTDSTGTYKILV 85 (159)
Q Consensus 25 ~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~----------~~~~~~TD~~G~F~i~l 85 (159)
.++.|+|+|+=.+| .||+||.|.|==-|. +|... ......||++|.|.+..
T Consensus 101 ~~l~l~G~V~D~~G---------~Pv~~A~VeiWqada-~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~T 161 (254)
T 2boy_A 101 DTLIFRGEVVDQEG---------APLADVLLDMWQADA-AGEYSFINPTLPDYLFRGKIRTDENGRFTLRT 161 (254)
T ss_dssp CEEEEEEEEECTTS---------CBCCSCEEEEECCCT-TSCCBTTBTTSCTTTTEEEEECCTTSEEEEEE
T ss_pred CEEEEEEEEECCCC---------CCCCCCEEEEEcCCC-CCccCCcCCCCCCCCCeeEEEeCCCceEEEEE
Confidence 46999999984333 599999999943332 22221 14567899999999863
No 9
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=83.35 E-value=1.7 Score=34.10 Aligned_cols=53 Identities=9% Similarity=0.140 Sum_probs=36.1
Q ss_pred CCCeEEEEEEEcccCCCCCCCCCccccCCCEEEE-EecCCC------Cc-----eEEE--EEEEEc-CCCceEEEEe
Q 031458 24 PKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKV-ECKDRK------SM-----QVVY--SREGKT-DSTGTYKILV 85 (159)
Q Consensus 24 ~~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v-~C~~~~------~~-----~v~~--~~~~~T-D~~G~F~i~l 85 (159)
+.++.|+|+|.=.+| .||+||.|-| +|.... .. ...| ...-.| |++|.|.+..
T Consensus 50 G~~l~v~G~V~D~~G---------~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~T 117 (209)
T 2bum_A 50 GQRIRLEGQVFDGLG---------LPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNT 117 (209)
T ss_dssp SCEEEEEECEECTTS---------CBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEE
T ss_pred CCEEEEEEEEECCCC---------CCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEE
Confidence 356999999994433 5999999999 454321 00 1112 456677 9999999864
No 10
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=82.10 E-value=0.94 Score=38.03 Aligned_cols=44 Identities=23% Similarity=0.161 Sum_probs=31.3
Q ss_pred eEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEEecC
Q 031458 27 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSE 87 (159)
Q Consensus 27 ~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~~ 87 (159)
..|.|.|.=. ....||+||+|.|+ +. ....+||++|.|.+.++.
T Consensus 301 ~~i~G~V~D~--------~~g~pi~~A~V~v~--~~-------~~~~~Td~~G~y~~~l~~ 344 (380)
T 1h8l_A 301 RGIWGFVLDA--------TDGRGILNATISVA--DI-------NHPVTTYKDGDYWRLLVQ 344 (380)
T ss_dssp CEEEEEEEET--------TTCSBCTTCEEEET--TE-------EEEEECCTTSEEEECCCS
T ss_pred ccceEEEEeC--------CCCCccCceEEEEe--cC-------cceeEECCCEEEEEecCC
Confidence 4799999721 12369999999985 21 134689999999886653
No 11
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=81.90 E-value=1 Score=38.57 Aligned_cols=42 Identities=21% Similarity=0.303 Sum_probs=31.1
Q ss_pred eEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEEec
Q 031458 27 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVS 86 (159)
Q Consensus 27 ~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~ 86 (159)
..|.|.|. |. ...||+||+|.|+ +. ....+||++|.|.+.++
T Consensus 321 ~~i~G~V~-D~--------~g~pi~gA~V~v~--~~-------~~~~~Td~~G~y~~~l~ 362 (439)
T 2nsm_A 321 QGIKGMVL-DQ--------NYNNLANAVISVS--GI-------NHDVTSGDHGDYFRLLL 362 (439)
T ss_dssp CSEEEEEE-CT--------TSCBCTTCEEEET--TE-------EEEEECCTTSEEEECCC
T ss_pred cceEEEEE-cC--------CCCCccceEEEEE--cc-------cceeEECCCCeEEEccC
Confidence 46999997 21 2369999999995 21 13579999999988765
No 12
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=81.58 E-value=3.5 Score=33.10 Aligned_cols=53 Identities=19% Similarity=0.133 Sum_probs=37.3
Q ss_pred CCCeEEEEEEEcccCCCCCCCCCccccCCCEEEE-EecCCCC-------------ceEEEEEEEEcCCCceEEEEe
Q 031458 24 PKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKV-ECKDRKS-------------MQVVYSREGKTDSTGTYKILV 85 (159)
Q Consensus 24 ~~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v-~C~~~~~-------------~~v~~~~~~~TD~~G~F~i~l 85 (159)
+.++.|+|+|+=.+| .||+||.|.| +|..... ..........||++|.|.+..
T Consensus 75 G~~i~l~G~V~D~~G---------~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~T 141 (238)
T 3t63_M 75 GERIIVAGRVVDQYG---------KPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRT 141 (238)
T ss_dssp SCEEEEEEEEEETTS---------CBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEE
T ss_pred CcEEEEEEEEECCCC---------CCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEE
Confidence 356999999994433 5999999999 6653310 001234667999999999964
No 13
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=78.83 E-value=3.6 Score=34.28 Aligned_cols=49 Identities=31% Similarity=0.287 Sum_probs=33.8
Q ss_pred CeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceE----------EEEEEEEcCCCceEEEE
Q 031458 26 PFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQV----------VYSREGKTDSTGTYKIL 84 (159)
Q Consensus 26 ~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v----------~~~~~~~TD~~G~F~i~ 84 (159)
++.|+|+|+=.+| .||+||.|.|==-|. +|.. .......||++|.|.+.
T Consensus 136 ~l~v~G~V~D~~G---------~Pv~gA~VeiWqada-~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~ 194 (312)
T 2xsu_A 136 TLIIEGTVTDTEG---------NIIEGAKVEVWHANS-LGNYSFFDKSQSDFNLRRTILTDVNGKYVAL 194 (312)
T ss_dssp EEEEEEEEEETTS---------CBCTTCEEEEECCCT-TSCCBTTBTTSCTTTTEEEEECCTTSEEEEE
T ss_pred eEEEEEEEECCCC---------CCCCCCEEEEEecCC-CCcccCCCCCCCCCCCeeEEEeCCCceEEEE
Confidence 6888888884333 599999999953332 1221 12356789999999976
No 14
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=78.49 E-value=4.1 Score=33.14 Aligned_cols=52 Identities=31% Similarity=0.427 Sum_probs=35.6
Q ss_pred CCeEEEEEEEcccCCCCCCCCCccccCCCEEEE-EecCCC--------CceEEEEEEEEcCCCceEEEEe
Q 031458 25 KPFSVEGRVYCDTCQAGFETPATTYIAGAKVKV-ECKDRK--------SMQVVYSREGKTDSTGTYKILV 85 (159)
Q Consensus 25 ~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v-~C~~~~--------~~~v~~~~~~~TD~~G~F~i~l 85 (159)
.++.|.|+|+=.+ ..||+||.|-| +|.... .........-.||++|.|.+..
T Consensus 98 ~pl~v~G~V~D~~---------G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~T 158 (260)
T 3th1_A 98 KPLIIRGTVRSDT---------GELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRT 158 (260)
T ss_dssp CEEEEEEEEEETT---------SCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEE
T ss_pred CEEEEEEEEECCC---------CCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEE
Confidence 3589999998333 35999999999 455331 0011135677999999998863
No 15
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=78.21 E-value=3.6 Score=33.96 Aligned_cols=50 Identities=24% Similarity=0.254 Sum_probs=36.2
Q ss_pred CCeEEEEEEEcccCCCCCCCCCccccCCCEEEE-EecCCCCceE----------EEEEEEEcCCCceEEEEe
Q 031458 25 KPFSVEGRVYCDTCQAGFETPATTYIAGAKVKV-ECKDRKSMQV----------VYSREGKTDSTGTYKILV 85 (159)
Q Consensus 25 ~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v-~C~~~~~~~v----------~~~~~~~TD~~G~F~i~l 85 (159)
.++.|+|+|+=.+| .||+||.|.| +|... |.. .....-.||++|.|.+..
T Consensus 128 ~~l~l~G~V~D~~G---------~Pv~~A~VeiWqada~--G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~T 188 (290)
T 3n9t_A 128 VPALVYGRVLDVQG---------RPVVGAVLDVWQTADN--GMYSGQDPDQPFGNLRGRYRSDNDGCFAIQT 188 (290)
T ss_dssp CEEEEEEEEEETTS---------CBCSSCEEEEECCCTT--SCCTTTSTTSCTTTTEEEEECCTTSEEEEEE
T ss_pred CeEEEEEEEECCCC---------CCCCCCEEEEEccCCC--CCcCCCCCCCCCCCceeEEEeCCCceEEEEE
Confidence 36999999995443 5999999999 44432 222 125677999999999864
No 16
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=77.87 E-value=4.7 Score=33.30 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=36.7
Q ss_pred CCeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCce---------EEEEEEEEcCCCceEEEEe
Q 031458 25 KPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQ---------VVYSREGKTDSTGTYKILV 85 (159)
Q Consensus 25 ~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~---------v~~~~~~~TD~~G~F~i~l 85 (159)
.++.|+|+|+=.+| .||+||.|-|==-|. +|. ..+...-.||++|.|.+..
T Consensus 132 ~~l~v~G~V~D~~G---------~Pv~~A~VEiWqada-~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~T 191 (293)
T 1tmx_A 132 EPCWVEGTVTDTDG---------NPVPDARIEVWEADD-DGFYDVQYDDDRTAARAHLLSGPDGGYAFWA 191 (293)
T ss_dssp CEEEEEEEEEETTS---------CBCTTCEEEEECCCT-TSCCGGGSSSCCCCSEEEEECCTTSEEEEEE
T ss_pred CEEEEEEEEECCCC---------CCCCCceeEEEecCC-CCcccCCccCCCCCceeEEEeCCCceEEEEE
Confidence 46999999984443 599999999943333 222 2345778999999999864
No 17
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=77.43 E-value=4.6 Score=32.40 Aligned_cols=51 Identities=20% Similarity=0.053 Sum_probs=36.6
Q ss_pred CCCeEEEEEEEcccCCCCCCCCCccccCCCEEEEE-ecCCCCce---------------EEEEEEEEcCCCceEEEEe
Q 031458 24 PKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVE-CKDRKSMQ---------------VVYSREGKTDSTGTYKILV 85 (159)
Q Consensus 24 ~~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~-C~~~~~~~---------------v~~~~~~~TD~~G~F~i~l 85 (159)
+.++.|+|+|+=.+| .||+||.|-|= |... |. ........||++|.|.+..
T Consensus 76 G~~i~v~G~V~D~~G---------~Pv~~A~VeiWqada~--G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~T 142 (241)
T 2bum_B 76 GERVIVHGYVRDQFG---------RPVKNALVEVWQANAS--GRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRT 142 (241)
T ss_dssp SCEEEEEEEEEETTS---------CBCCSCEEEEECCCTT--SCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEE
T ss_pred CcEEEEEEEEECCCC---------CCCCCcEEEEEecCCC--ceeCCCCCCcccccCCCccceeEEEeCCCceEEEEE
Confidence 347999999995443 59999999994 4432 21 1124677899999999864
No 18
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=76.63 E-value=5.5 Score=33.18 Aligned_cols=51 Identities=22% Similarity=0.252 Sum_probs=35.7
Q ss_pred CCeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEE----------EEEEEEcCCCceEEEEe
Q 031458 25 KPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVV----------YSREGKTDSTGTYKILV 85 (159)
Q Consensus 25 ~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~----------~~~~~~TD~~G~F~i~l 85 (159)
.++.|+|+|+=-+ ..||+||.|-|==-|. +|... ....-.||++|.|.+..
T Consensus 131 ~~l~v~G~V~D~~---------G~Pv~gA~VeiWqada-~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~T 191 (311)
T 2azq_A 131 VVMFLQGQVFDAN---------GKPLAGATVDLWHANT-QGTYSYFDSTQSEFNLRRRIITDAEGRYRARS 191 (311)
T ss_dssp CEEEEEEEEECSS---------SCBCTTCEEEEECCCT-TSCCBTTBTTSCTTTTEEEEECCTTCEEEEEE
T ss_pred cEEEEEEEEEcCC---------CCCCCCceeEEEecCC-CCccCCCCCCCCCCCCeeEEEeCCCceEEEEE
Confidence 4689999998332 3699999999943333 23221 24567899999999864
No 19
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=74.45 E-value=5.1 Score=32.51 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=35.8
Q ss_pred CCeEEEEEEEcccCCCCCCCCCccccCCCEEEE-EecCCC------Cce---EEEEEEEEcCCCceEEEEe
Q 031458 25 KPFSVEGRVYCDTCQAGFETPATTYIAGAKVKV-ECKDRK------SMQ---VVYSREGKTDSTGTYKILV 85 (159)
Q Consensus 25 ~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v-~C~~~~------~~~---v~~~~~~~TD~~G~F~i~l 85 (159)
.++.|+|+|+=-+| .||+||.|.| +|.... .+. ......-.||++|.|.+..
T Consensus 102 ~~l~l~G~V~D~~G---------~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~T 163 (257)
T 3o5u_A 102 DRMRFTGSVRDTSG---------TPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHS 163 (257)
T ss_dssp CEEEEEEEEECTTC---------CBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEE
T ss_pred CEEEEEEEEECCCC---------CCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEE
Confidence 36899999994333 5999999999 454321 000 1235677999999999864
No 20
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=73.20 E-value=5.1 Score=31.25 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=36.8
Q ss_pred CCCeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCce----------EEEEEEEEcCCC-ceEEEEe
Q 031458 24 PKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQ----------VVYSREGKTDST-GTYKILV 85 (159)
Q Consensus 24 ~~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~----------v~~~~~~~TD~~-G~F~i~l 85 (159)
+.++.|+|+|+=.+| .||+||.|.|==.|. +|. ......-.||++ |.|.+..
T Consensus 46 G~~l~v~G~V~D~~G---------~Pv~~A~VeiWqada-~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~T 108 (200)
T 3t63_A 46 GEHILLLGQVYDGNG---------HLVRDSFLEVWQADA-NGEYQDAYNLENAFNSFGRTATTFDAGEWTLHT 108 (200)
T ss_dssp SCEEEEEECEECTTS---------CBCSSCEEEEEECCT-TSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEE
T ss_pred CCEEEEEEEEECCCC---------CCCCCCEEEEEccCC-CCCcCCCCCCCCCccccceEecCCCCCEEEEEE
Confidence 347999999994433 599999999943332 122 123466789998 9999964
No 21
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=68.97 E-value=8.1 Score=31.71 Aligned_cols=50 Identities=24% Similarity=0.269 Sum_probs=35.6
Q ss_pred CCeEEEEEEEcccCCCCCCCCCccccCCCEEEE-EecCCCCceE----------EEEEEEEcCCCceEEEEe
Q 031458 25 KPFSVEGRVYCDTCQAGFETPATTYIAGAKVKV-ECKDRKSMQV----------VYSREGKTDSTGTYKILV 85 (159)
Q Consensus 25 ~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v-~C~~~~~~~v----------~~~~~~~TD~~G~F~i~l 85 (159)
.++.|+|+|+=-+| .||+||.|.| +|... |.. .....-.||++|.|.+..
T Consensus 130 ~pl~l~G~V~D~~G---------~Pv~~A~VeiWqada~--G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~T 190 (280)
T 3hhy_A 130 TPLVFSGQVTDLDG---------NGLAGAKVELWHADND--GYYSQFAPHLPEWNLRGTIIADEEGRYEITT 190 (280)
T ss_dssp CEEEEEEEEECTTS---------CBCSSCEEEEECCCTT--SCCTTSSTTSCTTTTEEEEECCTTSEEEEEE
T ss_pred eEEEEEEEEECCCC---------CCCCCcEEEEEecCCC--CCCCCCCCCCCCCcceEEEEeCCCceEEEEE
Confidence 46899999994333 5999999999 44432 211 124677999999999864
No 22
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=61.68 E-value=16 Score=30.30 Aligned_cols=49 Identities=18% Similarity=0.285 Sum_probs=33.8
Q ss_pred CeEEEEEEEcccCCCCCCCCCccccCCCEEEEE-ecCCCCce------------EEEEEEEEcCCCceEEEEe
Q 031458 26 PFSVEGRVYCDTCQAGFETPATTYIAGAKVKVE-CKDRKSMQ------------VVYSREGKTDSTGTYKILV 85 (159)
Q Consensus 26 ~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~-C~~~~~~~------------v~~~~~~~TD~~G~F~i~l 85 (159)
++.|+|+|+=-+ ..||+||.|-|= |... |. ......-.||++|.|.+..
T Consensus 133 ~l~l~G~V~D~~---------G~Pv~~A~VeiWqada~--G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~T 194 (311)
T 1dmh_A 133 TLILHGTIFDAD---------GKPLPNAKVEIWHANTK--GFYSHFDPTGEQQAFNMRRSIITDENGQYRVRT 194 (311)
T ss_dssp EEEEEEEEECTT---------SCBCTTCEEEEEECCTT--SCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEE
T ss_pred eEEEEEEEEcCC---------CCCCCCcEEEEEccCCC--cccCCcCCcccCCCCCCeeEEEeCCCceEEEEE
Confidence 678888887322 369999999994 4432 21 1124567899999999863
No 23
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=60.18 E-value=15 Score=27.05 Aligned_cols=39 Identities=15% Similarity=0.020 Sum_probs=28.0
Q ss_pred CCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEE
Q 031458 44 TPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYK 82 (159)
Q Consensus 44 t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~ 82 (159)
+....|-+|..|.|.=.+...+.-....++.||++|...
T Consensus 35 t~~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~ 73 (138)
T 3iwv_A 35 IAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCP 73 (138)
T ss_dssp TTTTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCT
T ss_pred cCCccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcC
Confidence 345689999999999776422233445789999999763
No 24
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=50.56 E-value=30 Score=24.54 Aligned_cols=39 Identities=18% Similarity=0.014 Sum_probs=27.7
Q ss_pred CCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEE
Q 031458 44 TPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKI 83 (159)
Q Consensus 44 t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i 83 (159)
+....|-+|..|+|.=.+.+ +.-..-.++.||++|...-
T Consensus 10 t~~G~PAagv~V~L~~~~~~-~~~~~l~~~~Tn~DGR~~~ 48 (115)
T 1f86_A 10 AVRGSPAINVAVHVFRKAAD-DTWEPFASGKTSESGELHG 48 (115)
T ss_dssp TTTTEECTTCEEEEEEECTT-SCEEEEEEEECCTTSEECC
T ss_pred CCCCCcCCCCEEEEEEcCCC-CCcEEEEEeecCCCccccC
Confidence 34568999999999865432 2233357999999998763
No 25
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=49.66 E-value=29 Score=24.79 Aligned_cols=38 Identities=24% Similarity=0.148 Sum_probs=26.5
Q ss_pred CCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEE
Q 031458 44 TPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYK 82 (159)
Q Consensus 44 t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~ 82 (159)
+....|-+|..|+|.=.+.+ +.-..-.++.||++|...
T Consensus 11 t~~G~PAagv~V~L~~~~~~-~~~~~l~~~~Tn~DGR~~ 48 (119)
T 1oo2_A 11 AVKGTPAGSVALKVSQKTAD-GGWTQIATGVTDATGEIH 48 (119)
T ss_dssp TTTTEECTTCEEEEEEECTT-SCEEEEEEEECCTTSCCT
T ss_pred CCCcCCCCCCEEEEEEeCCC-CCcEEEEEEecCCCCccc
Confidence 34568999999999865432 223334789999998754
No 26
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=46.39 E-value=30 Score=24.70 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=25.0
Q ss_pred CCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEE
Q 031458 45 PATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYK 82 (159)
Q Consensus 45 ~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~ 82 (159)
....|-+|..|+|.-.+ ....++.||++|...
T Consensus 20 ~~G~PAagv~V~L~~~~------~~l~~~~Tn~DGR~~ 51 (116)
T 3qva_A 20 STGTPAEGVTVSLSREG------ETLANLVTNAQGRIA 51 (116)
T ss_dssp TTTEECTTCEEEEEETT------EEEEEEECCTTSEEC
T ss_pred CCCcCCCCCEEEEEEcc------EeEEEeccCCCCCcc
Confidence 45679999999998654 234789999999874
No 27
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=45.74 E-value=33 Score=24.31 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=27.6
Q ss_pred CCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEE
Q 031458 44 TPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKI 83 (159)
Q Consensus 44 t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i 83 (159)
+....|-+|..|.|.=.+. .+. ..-.++.||++|...-
T Consensus 13 t~~G~PAagv~V~L~~~~~-~~~-~~l~~~~Tn~DGR~~~ 50 (114)
T 2g2n_A 13 QQTGKPAADVTVTLEKKAD-NGW-LQLNTAKTDKDGRIKA 50 (114)
T ss_dssp TTTTEECCSCEEEEEEECS-SSE-EEEEEEECCTTSEESC
T ss_pred CCCcCCCCCCEEEEEEeCC-CCc-EEEEEEecCCCCcccc
Confidence 3456899999999986654 233 3347999999998643
No 28
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=42.15 E-value=47 Score=23.96 Aligned_cols=39 Identities=18% Similarity=0.039 Sum_probs=27.6
Q ss_pred CCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEE
Q 031458 44 TPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKI 83 (159)
Q Consensus 44 t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i 83 (159)
+....|-+|..|+|.=.+.+.+ -..-.++.||++|...-
T Consensus 19 t~~G~PAagv~V~L~~~~~~~~-w~~l~~~~Tn~DGR~~~ 57 (127)
T 2h4e_A 19 AVRGSPAINVAVHVFRKAADDT-WEPFASGKTSESGELHG 57 (127)
T ss_dssp TTTTEECTTCEEEEEEECTTSC-EEEEEEEECCTTSEECC
T ss_pred CCCcCCCCCCEEEEEEeCCCCC-eEEEEEeecCCCccccC
Confidence 3456899999999986542222 23347999999998763
No 29
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=36.89 E-value=64 Score=24.89 Aligned_cols=41 Identities=17% Similarity=0.072 Sum_probs=28.0
Q ss_pred CccccCCCEEEEEecCCC-Cc----------------eEEEEEEEEcCCCceEEEE-ec
Q 031458 46 ATTYIAGAKVKVECKDRK-SM----------------QVVYSREGKTDSTGTYKIL-VS 86 (159)
Q Consensus 46 ~~~pi~GA~V~v~C~~~~-~~----------------~v~~~~~~~TD~~G~F~i~-l~ 86 (159)
...||+||+..|.-.+.. .. .-......+||++|.+.+. |+
T Consensus 28 ~g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~ 86 (239)
T 2pz4_A 28 EGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLP 86 (239)
T ss_dssp SCEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEE
T ss_pred CCCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCC
Confidence 458999999999886542 00 0012356799999999885 54
No 30
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=30.09 E-value=52 Score=27.15 Aligned_cols=39 Identities=23% Similarity=0.291 Sum_probs=27.2
Q ss_pred ccccCCCEEEEEecCCCCceEEE---EEEEEcCCCceEEEE-ecC
Q 031458 47 TTYIAGAKVKVECKDRKSMQVVY---SREGKTDSTGTYKIL-VSE 87 (159)
Q Consensus 47 ~~pi~GA~V~v~C~~~~~~~v~~---~~~~~TD~~G~F~i~-l~~ 87 (159)
..+|+||+-.|...++. .+.. ..+.+||++|.|.+. |+.
T Consensus 263 ~~~L~GA~F~l~~~~g~--~~~~~~~~~~~~td~~G~~~~~~L~~ 305 (355)
T 3kpt_A 263 KNKMKGAEFVLKDNNGK--IVVVAGKEVTGVSDENGVIKWSNIPY 305 (355)
T ss_dssp CCBCSCCEEEEEETTSC--BCBSSSSBCEEECCTTSEEEEEEEES
T ss_pred CcccCCCEEEEEeCCCC--EEEeccceEEEEECCCCeEEECcCCC
Confidence 35999999999976542 1110 015789999999986 553
No 31
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=29.57 E-value=88 Score=25.72 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=26.0
Q ss_pred ccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEE-ec
Q 031458 47 TTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKIL-VS 86 (159)
Q Consensus 47 ~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~-l~ 86 (159)
..+|+||+-.|.=.+. ..+ ....+||++|.+.+. |+
T Consensus 19 ~~~L~GA~F~l~~~~g--~~~--~~~~tTd~~G~~~~~~L~ 55 (355)
T 3kpt_A 19 EKAMAGAVFSLFKKDG--TEV--KKELATDANGHIRVQGLE 55 (355)
T ss_dssp GCBCCSCEEEEEETTS--CEE--EEEEECCTTSEEEEEEEE
T ss_pred CCCcCCcEEEEEECCC--CEE--EEEEEECCCCeEEECCcC
Confidence 4699999999985543 222 246789999999883 54
No 32
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.60 E-value=27 Score=21.79 Aligned_cols=16 Identities=19% Similarity=0.889 Sum_probs=11.2
Q ss_pred eEEEEEEEcccCCCCC
Q 031458 27 FSVEGRVYCDTCQAGF 42 (159)
Q Consensus 27 ~~V~G~VyCd~C~~g~ 42 (159)
+...|.+||..|....
T Consensus 51 ~~~~g~~yC~~cy~~~ 66 (76)
T 1x68_A 51 LTQNKEIFCQKCGSGM 66 (76)
T ss_dssp EEETTEEEETTTTCCC
T ss_pred EeECCEEECHHHhhhh
Confidence 4567888888887543
No 33
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=27.07 E-value=1.4e+02 Score=20.32 Aligned_cols=25 Identities=12% Similarity=0.325 Sum_probs=14.2
Q ss_pred CCCceEEEEe----c-CCCcCcceEEEEcc
Q 031458 76 DSTGTYKILV----S-EDHQDQLCDAVLVS 100 (159)
Q Consensus 76 D~~G~F~i~l----~-~~~~~~~C~v~Lvs 100 (159)
+.+|.|++.. + ++...-.|.|.=.+
T Consensus 77 ~~dgty~~~s~L~v~~~~~~~ytC~V~H~~ 106 (119)
T 3jts_B 77 SKDWSFYLLYYTEFTPTEKDEYACRVNHVT 106 (119)
T ss_dssp CTTSCEEEEEEEEECCCSSCCEEEEEECTT
T ss_pred CCCCeEEEEEEEEEECCCCCEEEEEEEeCC
Confidence 6788887642 2 33334457776433
No 34
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=24.25 E-value=96 Score=27.29 Aligned_cols=40 Identities=18% Similarity=0.033 Sum_probs=26.9
Q ss_pred eEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEE
Q 031458 27 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKIL 84 (159)
Q Consensus 27 ~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~ 84 (159)
=.|.|+|- |.. +=..|.|.+.|++. .....||++|+|.|.
T Consensus 258 GtVsG~V~------G~~-----~~~~avv~~~~k~~-------qywt~td~~G~FtI~ 297 (508)
T 1nkg_A 258 GKVAGTAS------GAD-----SSMDWVVHWYNDAA-------QYWTYTSSSGSFTSP 297 (508)
T ss_dssp BEEEEEEE------SSC-----TTSCEEEEEECSSC-------EEEEECCTTCEEECC
T ss_pred cEEEEEEc------Ccc-----CCceEEEEEcCCCc-------eeEEEECCCCcEEeC
Confidence 47999987 210 11234566677654 357899999999996
No 35
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=23.45 E-value=1.9e+02 Score=23.34 Aligned_cols=51 Identities=14% Similarity=0.206 Sum_probs=37.6
Q ss_pred CCCCeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEEecC
Q 031458 23 NPKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSE 87 (159)
Q Consensus 23 ~~~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~~ 87 (159)
+...+.++=.|. | .| -||+|..|...=.+. .. ......||++|...+.|.+
T Consensus 17 G~d~~t~tatV~-D---~g------npv~g~~V~fs~~~G---~l-~~~~~~Td~~G~atvtlts 67 (282)
T 1f00_I 17 GQDAITYTVKVM-K---GD------KPVSNQEVTFTTTLG---KL-SNSTEKTDTNGYAKVTLTS 67 (282)
T ss_dssp SCCCEEEEEEEE-E---TT------EECTTCEEEEEESSS---EE-SCSEEECCTTSEEEEEEEC
T ss_pred CcceEEEEEEEE-E---CC------cccCCcEEEEEcCCC---cc-ccceeEECCCcEEEEEEEc
Confidence 445678888888 4 23 499999999976654 11 2346799999999999964
No 36
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=22.84 E-value=2.3e+02 Score=24.39 Aligned_cols=53 Identities=21% Similarity=0.239 Sum_probs=37.0
Q ss_pred CCCCeEEEEEEEcccCCCCCCCCCccccCCCEEEEEecCCCCceEEEEEEEEcCCCceEEEEecC
Q 031458 23 NPKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSE 87 (159)
Q Consensus 23 ~~~~~~V~G~VyCd~C~~g~~t~~~~pi~GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~~ 87 (159)
+.....++-.|. .....|++|..|.+.-.++. ..-.....||++|.+.+.+.+
T Consensus 24 G~~~~~ltatV~---------D~~Gnpv~g~~Vtf~~~~g~---~~~~~t~~Td~~G~a~~tlts 76 (492)
T 1cwv_A 24 GKTAITVEFTVA---------DFEGKPLAGQEVVITTNNGA---LPNKITEKTDANGVARIALTN 76 (492)
T ss_dssp SSSCEEEEEEEE---------CTTSCBCCSCEEEEECCTTC---BSCEEEEECCTTSEEEEEEBC
T ss_pred CCceEEEEEEEE---------cCCCCCCCCCEEEEEECCCc---cccccceeeCCCceEEEEEEc
Confidence 344677777775 12346999999999865442 111246799999999999853
No 37
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=21.75 E-value=1.3e+02 Score=19.62 Aligned_cols=30 Identities=27% Similarity=0.387 Sum_probs=18.3
Q ss_pred EEEEecCCCCceEEEEEEEEcCCCceEEEEec
Q 031458 55 VKVECKDRKSMQVVYSREGKTDSTGTYKILVS 86 (159)
Q Consensus 55 V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~ 86 (159)
+.++|.+..++ +|.+.-+-.+.|.|.|.+.
T Consensus 49 ~~~~v~d~~dG--ty~v~Y~p~~~G~y~i~V~ 78 (97)
T 2bp3_A 49 AEISCTDNQDG--TCSVSYLPVLPGDYSILVK 78 (97)
T ss_dssp CEEEEEECSSS--EEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEECCCC--EEEEEEEeCCCCcEEEEEE
Confidence 34566666444 3445555567788888775
No 38
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=21.71 E-value=1.5e+02 Score=19.51 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=17.1
Q ss_pred CCEEEEEecCCCCceEEEEEEEEcCCCceEEEEec
Q 031458 52 GAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVS 86 (159)
Q Consensus 52 GA~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~ 86 (159)
|..+.+++.|..++ +|.+.-+-.+.|.|.|.+.
T Consensus 50 g~~~~~~v~d~~dG--ty~V~Y~p~~~G~y~i~V~ 82 (100)
T 3rgh_A 50 GLPAEVYIQDHGDG--THTITYIPLCPGAYTVTIK 82 (100)
T ss_dssp SCBCEEEEEECSSS--EEEEEEECCSSEEEEEEEE
T ss_pred CCEeEEEEEeCCCC--EEEEEEEeCCCeeEEEEEE
Confidence 44555555555433 3334444555666666654
No 39
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.49 E-value=1.5e+02 Score=19.44 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=15.6
Q ss_pred CEEEEEecCCCCceEEEEEEEEcCCCceEEEEec
Q 031458 53 AKVKVECKDRKSMQVVYSREGKTDSTGTYKILVS 86 (159)
Q Consensus 53 A~V~v~C~~~~~~~v~~~~~~~TD~~G~F~i~l~ 86 (159)
..+.+++.|..++ +|.+.-+-.+.|.|.|.+.
T Consensus 63 ~~~~~~v~D~~dG--ty~v~y~p~~~G~y~i~V~ 94 (113)
T 2ds4_A 63 SPVRTMVQDNKDG--TYYISYTPKEPGVYTVWVC 94 (113)
T ss_dssp CCCEEEEECCSSS--EEEEEEECSSSEEEEEEEE
T ss_pred ceeEEEEEECCCC--EEEEEEEeCCCeEEEEEEE
Confidence 4444555554333 2334444455566666553
No 40
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=20.43 E-value=1.3e+02 Score=26.15 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=14.0
Q ss_pred CCCCeEEEEEEEcccCC
Q 031458 23 NPKPFSVEGRVYCDTCQ 39 (159)
Q Consensus 23 ~~~~~~V~G~VyCd~C~ 39 (159)
....+++.|+|.||+..
T Consensus 45 sq~~v~~vGRI~~Ds~~ 61 (460)
T 3flo_A 45 SQSEIYAVGRIVPDSPT 61 (460)
T ss_dssp CSSCEEEEEEEEESSSS
T ss_pred ccccEEEEEEEeeCCCC
Confidence 34569999999999874
Done!